Query 039344
Match_columns 873
No_of_seqs 778 out of 6145
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 14:47:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.5E-67 1.5E-71 632.6 33.7 518 4-528 133-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 7.2E-62 2.5E-66 587.2 34.4 510 4-519 107-721 (768)
3 3t6q_A CD180 antigen; protein- 100.0 1.4E-57 4.6E-62 538.0 39.2 478 12-495 26-564 (606)
4 1ziw_A TOLL-like receptor 3; i 100.0 4.5E-57 1.5E-61 540.8 38.5 511 4-516 32-624 (680)
5 1ziw_A TOLL-like receptor 3; i 100.0 4.5E-55 1.5E-59 523.5 41.6 491 4-496 56-627 (680)
6 3t6q_A CD180 antigen; protein- 100.0 1.9E-55 6.6E-60 519.5 37.4 464 4-471 40-564 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 2.9E-55 9.8E-60 535.1 36.9 491 6-515 13-561 (844)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-55 3.9E-60 521.5 32.3 476 6-495 20-562 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 4.7E-55 1.6E-59 516.3 31.4 479 23-516 13-560 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 1.7E-54 5.9E-59 528.2 34.0 477 4-496 31-565 (844)
11 2z63_A TOLL-like receptor 4, v 100.0 3.1E-52 1.1E-56 488.7 29.8 476 12-499 21-539 (570)
12 4gt4_A Tyrosine-protein kinase 100.0 1.9E-52 6.4E-57 442.6 20.3 255 602-873 26-303 (308)
13 4asz_A BDNF/NT-3 growth factor 100.0 1.8E-52 6E-57 440.9 16.5 254 602-872 13-285 (299)
14 4aoj_A High affinity nerve gro 100.0 8.6E-52 3E-56 441.8 20.9 253 602-872 41-315 (329)
15 3omv_A RAF proto-oncogene seri 100.0 1.9E-51 6.4E-56 432.6 22.0 257 601-872 35-296 (307)
16 2z63_A TOLL-like receptor 4, v 100.0 2.6E-50 8.7E-55 472.5 30.1 459 4-472 35-536 (570)
17 2z81_A CD282 antigen, TOLL-lik 100.0 9.7E-51 3.3E-55 473.5 25.4 477 5-496 13-515 (549)
18 4fih_A Serine/threonine-protei 100.0 7.6E-51 2.6E-55 433.0 22.2 249 602-869 74-323 (346)
19 4b9d_A Serine/threonine-protei 100.0 1.5E-51 5E-56 439.2 16.6 252 602-869 24-276 (350)
20 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.4E-51 2.5E-55 426.4 14.7 248 602-867 32-282 (311)
21 4fie_A Serine/threonine-protei 100.0 1.2E-49 4.2E-54 434.2 24.6 249 602-869 151-400 (423)
22 3hyh_A Carbon catabolite-derep 100.0 6.2E-50 2.1E-54 414.0 21.1 248 602-869 13-262 (275)
23 3fpq_A Serine/threonine-protei 100.0 1.7E-49 6E-54 414.6 21.1 246 605-869 29-282 (290)
24 4eco_A Uncharacterized protein 100.0 2.7E-50 9.1E-55 475.0 15.8 451 22-492 82-601 (636)
25 4ase_A Vascular endothelial gr 100.0 1.2E-49 4.1E-54 428.6 19.2 264 594-872 56-343 (353)
26 4g3f_A NF-kappa-beta-inducing 100.0 1.7E-49 5.9E-54 421.4 19.8 247 602-871 58-311 (336)
27 4ecn_A Leucine-rich repeat pro 100.0 4.3E-49 1.5E-53 471.0 24.3 437 21-489 323-862 (876)
28 2z81_A CD282 antigen, TOLL-lik 100.0 8.1E-49 2.8E-53 457.3 25.8 478 21-514 5-510 (549)
29 3ubd_A Ribosomal protein S6 ki 100.0 4.6E-50 1.6E-54 420.8 13.0 249 602-869 24-281 (304)
30 2z7x_B TOLL-like receptor 1, v 100.0 2.8E-49 9.4E-54 457.8 19.5 454 24-495 3-485 (520)
31 3hmm_A TGF-beta receptor type- 100.0 5.3E-49 1.8E-53 417.8 19.9 261 602-872 3-293 (303)
32 4eco_A Uncharacterized protein 100.0 1.4E-49 4.9E-54 468.7 13.2 431 4-467 88-600 (636)
33 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-48 4.7E-53 451.9 18.7 450 4-471 7-485 (520)
34 4ecn_A Leucine-rich repeat pro 100.0 1.2E-47 4E-52 458.6 26.9 433 4-467 330-864 (876)
35 4g31_A Eukaryotic translation 100.0 1E-47 3.4E-52 405.5 20.8 250 602-869 5-279 (299)
36 4g8a_A TOLL-like receptor 4; l 100.0 3.9E-46 1.3E-50 443.1 33.9 469 12-492 45-581 (635)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.9E-46 2.7E-50 432.4 21.2 459 21-496 31-515 (562)
38 4b99_A Mitogen-activated prote 100.0 4.3E-45 1.5E-49 400.3 20.0 260 602-869 54-344 (398)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3E-45 1E-49 427.4 20.0 451 4-471 38-514 (562)
40 4f9c_A Cell division cycle 7-r 100.0 2.7E-44 9.1E-49 390.0 20.5 198 598-809 17-249 (361)
41 4g8a_A TOLL-like receptor 4; l 100.0 4.2E-43 1.4E-47 417.0 30.8 455 4-469 59-582 (635)
42 3v5w_A G-protein coupled recep 100.0 5.5E-44 1.9E-48 406.4 18.4 251 602-869 189-449 (689)
43 3uto_A Twitchin; kinase, muscl 100.0 2.2E-43 7.4E-48 406.5 21.4 251 602-869 157-410 (573)
44 3v47_A TOLL-like receptor 5B a 100.0 2.8E-42 9.5E-47 392.2 25.8 392 72-498 13-415 (455)
45 1jl5_A Outer protein YOPM; leu 100.0 9.3E-42 3.2E-46 384.3 28.6 413 14-496 5-434 (454)
46 3v47_A TOLL-like receptor 5B a 100.0 6.4E-42 2.2E-46 389.2 27.3 389 24-447 13-412 (455)
47 3p86_A Serine/threonine-protei 100.0 1.4E-42 4.6E-47 372.0 19.4 264 594-872 29-294 (309)
48 3uim_A Brassinosteroid insensi 100.0 2E-42 6.8E-47 374.9 20.5 280 589-872 17-307 (326)
49 3fxz_A Serine/threonine-protei 100.0 1.2E-41 4.2E-46 362.8 25.2 250 601-869 19-269 (297)
50 2qkw_B Protein kinase; three-h 100.0 3.5E-42 1.2E-46 371.9 19.8 272 593-872 30-311 (321)
51 2c30_A Serine/threonine-protei 100.0 4.5E-41 1.6E-45 362.5 26.2 261 590-869 23-294 (321)
52 3fe3_A MAP/microtubule affinit 100.0 1.6E-41 5.6E-46 366.0 21.1 249 601-869 14-264 (328)
53 1o6l_A RAC-beta serine/threoni 100.0 2.1E-41 7.1E-46 366.1 21.0 250 602-869 5-260 (337)
54 3s95_A LIMK-1, LIM domain kina 100.0 6.9E-41 2.4E-45 359.9 25.0 254 601-872 9-278 (310)
55 1jl5_A Outer protein YOPM; leu 100.0 1.6E-40 5.6E-45 374.1 28.4 404 4-477 18-439 (454)
56 3zgw_A Maternal embryonic leuc 100.0 2E-41 6.8E-46 367.2 19.9 249 601-869 9-260 (347)
57 2nru_A Interleukin-1 receptor- 100.0 2.9E-40 1E-44 354.6 28.8 276 589-872 12-302 (307)
58 2psq_A Fibroblast growth facto 100.0 3.2E-41 1.1E-45 370.7 21.6 255 601-872 80-360 (370)
59 4dc2_A Protein kinase C IOTA t 100.0 3.7E-41 1.3E-45 370.5 21.5 254 601-864 51-307 (396)
60 2yab_A Death-associated protei 100.0 6.6E-41 2.3E-45 365.5 22.5 254 601-869 11-272 (361)
61 3a8x_A Protein kinase C IOTA t 100.0 9.6E-41 3.3E-45 362.7 22.7 253 602-864 9-264 (345)
62 4eqm_A Protein kinase; transfe 100.0 6E-41 2E-45 357.0 20.1 258 601-872 10-271 (294)
63 3soa_A Calcium/calmodulin-depe 100.0 7E-41 2.4E-45 374.9 21.4 255 600-869 9-267 (444)
64 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.2E-41 7.6E-46 368.4 16.3 251 601-869 22-280 (353)
65 3c0i_A Peripheral plasma membr 100.0 3.9E-41 1.3E-45 367.7 18.3 256 602-869 24-286 (351)
66 1tki_A Titin; serine kinase, m 100.0 7.4E-41 2.5E-45 360.4 20.1 251 601-869 4-257 (321)
67 4euu_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 355.8 25.0 264 602-871 9-304 (319)
68 3niz_A Rhodanese family protei 100.0 1.7E-40 5.9E-45 356.4 22.4 262 601-869 20-300 (311)
69 3kul_A Ephrin type-A receptor 100.0 1.1E-40 3.9E-45 360.0 20.6 253 601-872 48-309 (325)
70 2bdw_A Hypothetical protein K1 100.0 1.5E-40 5.2E-45 363.9 20.5 253 601-869 28-284 (362)
71 3q4u_A Activin receptor type-1 100.0 2.5E-40 8.7E-45 354.1 21.4 257 601-872 7-298 (301)
72 2y0a_A Death-associated protei 100.0 1.9E-40 6.6E-45 358.4 20.5 253 602-869 11-271 (326)
73 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.2E-40 7.6E-45 348.1 20.4 252 601-872 7-260 (268)
74 4hcu_A Tyrosine-protein kinase 100.0 1.3E-40 4.6E-45 349.9 18.5 252 601-872 9-262 (269)
75 1xjd_A Protein kinase C, theta 100.0 6.5E-41 2.2E-45 363.2 16.1 252 599-868 14-268 (345)
76 3cbl_A C-FES, proto-oncogene t 100.0 6.9E-41 2.4E-45 369.5 16.5 255 600-872 112-370 (377)
77 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.7E-41 2.6E-45 361.2 16.4 249 601-869 8-258 (336)
78 2qol_A Ephrin receptor; recept 100.0 1.3E-40 4.6E-45 365.9 18.2 253 601-872 44-305 (373)
79 3soc_A Activin receptor type-2 100.0 1.3E-40 4.4E-45 359.4 17.7 263 601-872 23-314 (322)
80 1o6v_A Internalin A; bacterial 100.0 4.7E-39 1.6E-43 365.9 31.3 356 7-394 34-389 (466)
81 2zv2_A Calcium/calmodulin-depe 100.0 2.6E-40 8.8E-45 353.3 19.6 252 601-869 12-292 (298)
82 3bz5_A Internalin-J, INLJ; leu 100.0 2.1E-39 7.3E-44 365.3 28.1 360 13-473 34-393 (457)
83 1fot_A TPK1 delta, CAMP-depend 100.0 2.5E-40 8.7E-45 355.0 19.2 247 602-869 6-258 (318)
84 1ob3_A PFPK5, cell division co 100.0 3.4E-40 1.2E-44 350.4 19.8 261 602-869 2-280 (288)
85 2i0e_A Protein kinase C-beta I 100.0 2.4E-40 8.1E-45 360.0 18.6 252 600-869 18-276 (353)
86 3a62_A Ribosomal protein S6 ki 100.0 4.7E-40 1.6E-44 355.5 20.7 251 601-869 16-276 (327)
87 3tki_A Serine/threonine-protei 100.0 4.2E-40 1.4E-44 355.0 20.2 251 601-869 6-261 (323)
88 4fr4_A YANK1, serine/threonine 100.0 3.3E-40 1.1E-44 361.8 19.6 252 602-869 15-271 (384)
89 3qd2_B Eukaryotic translation 100.0 4.7E-40 1.6E-44 357.3 20.6 251 601-869 5-325 (332)
90 3bz5_A Internalin-J, INLJ; leu 100.0 6.4E-40 2.2E-44 369.6 22.4 374 47-497 20-393 (457)
91 3ugc_A Tyrosine-protein kinase 100.0 3.3E-40 1.1E-44 352.0 18.9 260 601-872 9-287 (295)
92 3tt0_A Basic fibroblast growth 100.0 6.1E-40 2.1E-44 362.8 21.7 255 601-872 68-348 (382)
93 3lb7_A RAF proto-oncogene seri 100.0 1.2E-39 4.1E-44 349.0 23.1 257 601-872 35-296 (307)
94 3o0g_A Cell division protein k 100.0 1.1E-39 3.9E-44 347.2 22.8 261 602-869 2-282 (292)
95 1luf_A Muscle-specific tyrosin 100.0 2.9E-40 9.8E-45 360.8 18.4 258 599-872 44-331 (343)
96 3vhe_A Vascular endothelial gr 100.0 1.3E-40 4.5E-45 365.9 15.5 264 594-872 14-351 (359)
97 3dtc_A Mitogen-activated prote 100.0 3.3E-40 1.1E-44 347.4 17.7 255 601-872 6-269 (271)
98 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.7E-40 1.3E-44 358.6 18.5 247 602-869 41-293 (350)
99 1o6v_A Internalin A; bacterial 100.0 5.4E-39 1.8E-43 365.3 28.8 347 42-418 43-389 (466)
100 3l9p_A Anaplastic lymphoma kin 100.0 2.9E-40 9.7E-45 362.9 17.5 256 601-872 70-341 (367)
101 2r5t_A Serine/threonine-protei 100.0 2E-40 6.8E-45 363.1 16.2 248 601-866 37-286 (373)
102 3kn6_A Ribosomal protein S6 ki 100.0 5.9E-40 2E-44 354.3 19.3 250 607-869 16-270 (325)
103 1rjb_A FL cytokine receptor; k 100.0 2E-40 6.8E-45 362.1 15.4 259 599-872 42-330 (344)
104 3gen_A Tyrosine-protein kinase 100.0 5.8E-40 2E-44 347.9 18.5 252 601-872 23-276 (283)
105 2eue_A Carbon catabolite derep 100.0 1E-39 3.5E-44 344.4 19.9 248 602-869 13-262 (275)
106 4ejn_A RAC-alpha serine/threon 100.0 1.8E-40 6.1E-45 374.9 14.7 251 601-869 147-404 (446)
107 2izr_A Casein kinase I isoform 100.0 1E-39 3.5E-44 354.0 20.1 255 601-872 8-277 (330)
108 3cok_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 347.2 17.4 252 601-869 10-262 (278)
109 2w4o_A Calcium/calmodulin-depe 100.0 8.6E-40 2.9E-44 356.5 19.4 250 601-869 52-305 (349)
110 2i1m_A Macrophage colony-stimu 100.0 2E-40 6.8E-45 360.3 14.3 259 599-872 43-322 (333)
111 4aw2_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 368.1 16.2 264 594-869 66-338 (437)
112 3ork_A Serine/threonine protei 100.0 1.4E-40 4.9E-45 357.4 13.0 255 601-869 11-273 (311)
113 1kob_A Twitchin; kinase, intra 100.0 1.3E-39 4.5E-44 358.5 20.8 252 601-869 50-304 (387)
114 2y94_A 5'-AMP-activated protei 100.0 8.4E-40 2.9E-44 368.4 19.6 249 602-869 16-266 (476)
115 2qr7_A Ribosomal protein S6 ki 100.0 5.1E-40 1.8E-44 356.5 17.2 251 601-869 21-277 (342)
116 2pmi_A Negative RE, cyclin-dep 100.0 2.3E-39 7.8E-44 348.8 22.1 263 601-869 4-293 (317)
117 3v8s_A RHO-associated protein 100.0 5.6E-41 1.9E-45 371.3 9.6 259 596-869 63-329 (410)
118 2ivs_A Proto-oncogene tyrosine 100.0 9E-40 3.1E-44 352.1 18.7 256 601-872 22-307 (314)
119 1t46_A HOMO sapiens V-KIT hard 100.0 8.9E-40 3E-44 352.0 18.6 257 601-872 22-303 (313)
120 1qcf_A Haematopoetic cell kina 100.0 4.7E-40 1.6E-44 371.8 17.0 254 599-872 185-440 (454)
121 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-39 5.9E-44 366.6 21.5 247 601-872 192-441 (450)
122 2rku_A Serine/threonine-protei 100.0 2E-39 6.8E-44 345.8 20.8 251 601-869 14-265 (294)
123 1u5q_A Serine/threonine protei 100.0 1E-39 3.6E-44 355.2 18.9 248 602-869 54-305 (348)
124 3gni_B Strad alpha; kinase fol 100.0 1.9E-39 6.6E-44 360.2 21.2 264 601-869 24-333 (389)
125 3qup_A Tyrosine-protein kinase 100.0 1.2E-39 4E-44 352.6 18.8 257 600-872 21-294 (323)
126 2wqm_A Serine/threonine-protei 100.0 2.2E-39 7.6E-44 348.3 20.7 261 601-872 31-293 (310)
127 2a2a_A Death-associated protei 100.0 2.4E-39 8.3E-44 349.5 21.0 254 601-869 11-272 (321)
128 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-39 5.2E-44 348.5 19.1 251 602-872 8-259 (307)
129 3uc3_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 353.1 22.1 252 601-869 19-274 (361)
130 1csn_A Casein kinase-1; phosph 100.0 4.3E-39 1.5E-43 344.0 22.2 257 601-872 9-279 (298)
131 3hko_A Calcium/calmodulin-depe 100.0 1.1E-39 3.7E-44 356.5 17.9 261 598-869 22-330 (345)
132 3kk8_A Calcium/calmodulin depe 100.0 2.6E-39 9E-44 343.0 20.2 253 601-869 5-261 (284)
133 3poz_A Epidermal growth factor 100.0 1.4E-39 4.7E-44 352.2 18.2 252 602-872 15-274 (327)
134 2pvf_A Fibroblast growth facto 100.0 2.3E-39 7.7E-44 351.9 19.9 256 601-872 34-314 (334)
135 4agu_A Cyclin-dependent kinase 100.0 2.3E-39 7.8E-44 348.4 19.8 261 602-869 3-284 (311)
136 1mp8_A Focal adhesion kinase 1 100.0 1.8E-39 6.2E-44 343.6 18.6 252 601-872 14-272 (281)
137 2h34_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 348.8 18.3 257 601-872 33-292 (309)
138 1p4o_A Insulin-like growth fac 100.0 6E-40 2.1E-44 354.8 15.1 261 596-872 19-295 (322)
139 2x4f_A Myosin light chain kina 100.0 1.7E-39 6E-44 356.8 18.8 247 606-869 93-342 (373)
140 1nxk_A MAP kinase-activated pr 100.0 7.1E-39 2.4E-43 355.4 23.8 251 602-869 61-321 (400)
141 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-39 3.6E-44 372.4 17.6 254 600-872 218-474 (495)
142 2owb_A Serine/threonine-protei 100.0 2.3E-39 7.8E-44 351.8 19.4 251 601-869 40-291 (335)
143 4e5w_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 345.6 20.3 260 602-872 21-298 (302)
144 4eut_A Serine/threonine-protei 100.0 2.2E-39 7.6E-44 359.9 19.7 266 601-872 8-305 (396)
145 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.4E-39 4.7E-44 367.6 18.1 252 600-872 182-436 (452)
146 3fdn_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 343.8 17.3 249 601-869 8-257 (279)
147 3f3z_A Calcium/calmodulin-depe 100.0 3E-39 1E-43 341.3 19.4 250 601-869 8-261 (277)
148 4f0f_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 340.4 22.1 254 601-872 18-285 (287)
149 3t9t_A Tyrosine-protein kinase 100.0 1.8E-39 6.1E-44 341.0 17.4 252 601-872 7-260 (267)
150 3p1a_A MYT1 kinase, membrane-a 100.0 4.8E-39 1.6E-43 345.3 21.0 246 602-869 57-304 (311)
151 3kmu_A ILK, integrin-linked ki 100.0 1.9E-39 6.4E-44 341.7 17.4 251 601-872 9-266 (271)
152 2vd5_A DMPK protein; serine/th 100.0 9.6E-40 3.3E-44 361.6 15.9 262 595-869 54-327 (412)
153 3bhy_A Death-associated protei 100.0 5.1E-39 1.7E-43 340.7 20.2 253 602-869 5-265 (283)
154 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.7E-39 9.2E-44 368.0 19.3 257 602-869 185-448 (543)
155 3dls_A PAS domain-containing s 100.0 2.8E-39 9.5E-44 350.3 18.1 246 600-870 22-275 (335)
156 2w5a_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 344.5 14.9 257 601-872 5-270 (279)
157 3kex_A Receptor tyrosine-prote 100.0 2.2E-39 7.7E-44 350.3 16.7 252 602-872 13-272 (325)
158 2acx_A G protein-coupled recep 100.0 3.3E-39 1.1E-43 367.7 18.8 256 601-869 183-444 (576)
159 3dbq_A Dual specificity protei 100.0 3.7E-39 1.3E-43 351.3 18.4 249 601-869 8-273 (343)
160 3llt_A Serine/threonine kinase 100.0 4.2E-39 1.4E-43 353.9 18.9 266 592-869 25-355 (360)
161 1qpc_A LCK kinase; alpha beta 100.0 6.5E-39 2.2E-43 339.0 19.7 251 601-872 12-265 (279)
162 3lxp_A Non-receptor tyrosine-p 100.0 9.4E-39 3.2E-43 344.3 21.3 257 603-872 32-306 (318)
163 2clq_A Mitogen-activated prote 100.0 2.4E-38 8.2E-43 337.7 24.2 253 602-869 22-278 (295)
164 3is5_A Calcium-dependent prote 100.0 5.5E-39 1.9E-43 340.4 19.1 252 602-869 22-278 (285)
165 3og7_A AKAP9-BRAF fusion prote 100.0 6.6E-39 2.3E-43 340.7 19.5 257 601-872 23-284 (289)
166 3gxj_A TGF-beta receptor type- 100.0 1.4E-40 5E-45 356.4 6.6 257 601-872 2-293 (303)
167 3g33_A Cell division protein k 100.0 7.9E-39 2.7E-43 343.5 20.1 264 600-869 7-296 (308)
168 3kfa_A Tyrosine-protein kinase 100.0 1.2E-39 4.2E-44 346.4 13.6 254 600-872 11-267 (288)
169 2y7j_A Phosphorylase B kinase 100.0 6.9E-39 2.4E-43 351.6 19.9 261 594-869 86-359 (365)
170 3op5_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 354.7 17.3 261 601-872 34-325 (364)
171 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-38 5.8E-43 340.1 22.3 250 601-870 21-271 (303)
172 3c1x_A Hepatocyte growth facto 100.0 2.9E-39 9.9E-44 354.8 16.5 252 603-872 90-351 (373)
173 3nyv_A Calmodulin-domain prote 100.0 3.9E-39 1.3E-43 368.3 18.2 253 601-869 25-281 (484)
174 1mqb_A Ephrin type-A receptor 100.0 1E-38 3.5E-43 346.2 20.5 252 602-872 44-305 (333)
175 3mdy_A Bone morphogenetic prot 100.0 1.9E-38 6.5E-43 345.4 22.7 263 598-872 33-327 (337)
176 3lm5_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 348.0 17.6 262 594-869 20-287 (327)
177 2ac3_A MAP kinase-interacting 100.0 8.5E-39 2.9E-43 344.8 19.6 259 602-869 12-295 (316)
178 2v62_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 350.6 17.7 260 601-872 36-324 (345)
179 2zmd_A Dual specificity protei 100.0 1E-38 3.5E-43 353.2 20.5 248 602-869 56-320 (390)
180 3ttj_A Mitogen-activated prote 100.0 1E-38 3.4E-43 360.6 20.7 258 601-869 61-355 (464)
181 2vgo_A Serine/threonine-protei 100.0 8E-39 2.7E-43 339.3 18.8 248 602-869 14-262 (284)
182 2xir_A Vascular endothelial gr 100.0 4.8E-39 1.6E-43 346.8 17.3 264 594-872 19-306 (316)
183 3mtl_A Cell division protein k 100.0 3.3E-39 1.1E-43 348.7 15.5 260 602-869 2-281 (324)
184 1u59_A Tyrosine-protein kinase 100.0 1.6E-38 5.4E-43 337.5 20.4 252 602-872 9-268 (287)
185 2jam_A Calcium/calmodulin-depe 100.0 1E-38 3.5E-43 342.0 19.0 250 601-869 8-261 (304)
186 1ua2_A CAK, cell division prot 100.0 1.1E-38 3.7E-43 348.0 19.5 266 599-870 7-292 (346)
187 3brb_A Proto-oncogene tyrosine 100.0 1.1E-38 3.7E-43 343.4 18.8 259 599-872 31-304 (313)
188 1xbb_A Tyrosine-protein kinase 100.0 7E-39 2.4E-43 340.9 17.1 253 601-872 15-275 (291)
189 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8E-39 2.8E-43 346.5 17.8 262 599-869 31-318 (329)
190 4hgt_A Casein kinase I isoform 100.0 2.2E-38 7.4E-43 338.2 20.9 258 600-872 7-276 (296)
191 4fvq_A Tyrosine-protein kinase 100.0 4.9E-39 1.7E-43 341.9 15.7 247 601-872 7-271 (289)
192 3lxl_A Tyrosine-protein kinase 100.0 1.3E-38 4.4E-43 344.9 19.2 260 601-872 22-299 (327)
193 2h6d_A 5'-AMP-activated protei 100.0 9.6E-39 3.3E-43 337.2 17.6 250 601-869 10-261 (276)
194 3uzp_A CKI-delta, CKID, casein 100.0 2.3E-38 7.8E-43 338.0 20.6 257 601-872 8-276 (296)
195 3lzb_A Epidermal growth factor 100.0 1.4E-38 4.7E-43 344.0 19.0 253 601-872 14-274 (327)
196 3cc6_A Protein tyrosine kinase 100.0 1.5E-38 5.2E-43 336.5 18.9 253 601-872 11-269 (281)
197 2yex_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 333.0 21.5 251 601-869 6-261 (276)
198 3i6u_A CDS1, serine/threonine- 100.0 1.3E-38 4.4E-43 355.9 19.2 256 599-869 132-399 (419)
199 2ozo_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 371.2 20.5 249 604-872 337-594 (613)
200 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-38 6.4E-43 364.0 20.9 254 600-869 34-301 (504)
201 3mwu_A Calmodulin-domain prote 100.0 1.1E-38 3.8E-43 364.4 18.9 252 601-869 21-276 (486)
202 3com_A Serine/threonine-protei 100.0 5.4E-38 1.8E-42 338.2 23.1 251 600-869 27-278 (314)
203 3f66_A Hepatocyte growth facto 100.0 1.8E-38 6.1E-43 339.1 19.2 254 601-872 24-287 (298)
204 4aaa_A Cyclin-dependent kinase 100.0 1.3E-38 4.5E-43 345.4 18.3 262 601-869 24-306 (331)
205 1b6c_B TGF-B superfamily recep 100.0 3.9E-38 1.3E-42 343.7 22.2 261 597-872 37-332 (342)
206 2h8h_A Proto-oncogene tyrosine 100.0 5.2E-39 1.8E-43 370.0 16.0 252 600-872 265-519 (535)
207 1x8b_A WEE1HU, WEE1-like prote 100.0 2.7E-38 9.3E-43 336.1 20.3 247 601-869 10-279 (289)
208 3byv_A Rhoptry kinase; malaria 100.0 3E-39 1E-43 356.8 12.9 245 601-869 72-359 (377)
209 3lij_A Calcium/calmodulin depe 100.0 1.7E-38 5.9E-43 363.3 19.5 252 601-869 36-291 (494)
210 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-38 3.8E-43 375.8 18.2 252 600-869 339-597 (674)
211 2id5_A Lingo-1, leucine rich r 100.0 2.3E-37 7.7E-42 353.7 28.5 320 48-394 14-334 (477)
212 2id5_A Lingo-1, leucine rich r 100.0 1.2E-37 4.3E-42 355.8 26.3 318 24-344 14-332 (477)
213 2yfx_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 344.3 17.7 256 601-872 29-300 (327)
214 2x7f_A TRAF2 and NCK-interacti 100.0 3.3E-38 1.1E-42 341.8 20.4 253 599-869 21-286 (326)
215 1byg_A CSK, protein (C-termina 100.0 1.3E-38 4.5E-43 336.4 16.8 247 601-872 20-269 (278)
216 3q60_A ROP5B; pseudokinase, tr 100.0 9.1E-39 3.1E-43 352.2 16.1 257 601-869 61-352 (371)
217 3g2f_A Bone morphogenetic prot 100.0 1.8E-38 6.2E-43 345.4 18.1 261 601-872 12-314 (336)
218 3oz6_A Mitogen-activated prote 100.0 1.2E-38 4E-43 353.7 16.8 203 600-811 7-235 (388)
219 1fvr_A Tyrosine-protein kinase 100.0 1.9E-38 6.4E-43 343.6 17.7 253 602-872 25-296 (327)
220 3pls_A Macrophage-stimulating 100.0 4.6E-38 1.6E-42 336.0 20.5 251 603-872 22-283 (298)
221 2buj_A Serine/threonine-protei 100.0 3E-38 1E-42 340.6 19.0 257 601-872 28-302 (317)
222 1cm8_A Phosphorylated MAP kina 100.0 3.3E-38 1.1E-42 346.3 19.5 256 601-869 24-307 (367)
223 2r3i_A Cell division protein k 100.0 2.7E-38 9.1E-43 338.0 18.2 262 602-869 3-283 (299)
224 2a19_B Interferon-induced, dou 100.0 4.4E-38 1.5E-42 333.6 19.7 245 600-872 9-270 (284)
225 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.2E-38 7.5E-43 348.5 17.7 247 600-871 63-334 (365)
226 3mi9_A Cell division protein k 100.0 5.8E-38 2E-42 343.4 20.9 260 602-869 17-311 (351)
227 2j7t_A Serine/threonine-protei 100.0 2.6E-38 8.7E-43 338.7 17.5 252 601-869 18-275 (302)
228 3rp9_A Mitogen-activated prote 100.0 3.4E-38 1.2E-42 357.9 19.5 195 601-803 52-280 (458)
229 1phk_A Phosphorylase kinase; g 100.0 4.7E-38 1.6E-42 335.9 19.2 255 600-869 15-283 (298)
230 2jii_A Serine/threonine-protei 100.0 2.4E-38 8.4E-43 346.3 17.4 258 601-872 41-332 (352)
231 4fl3_A Tyrosine-protein kinase 100.0 3.5E-38 1.2E-42 368.9 19.7 246 608-872 375-627 (635)
232 1t4h_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 332.9 20.5 249 602-869 26-282 (290)
233 2w1i_A JAK2; chromosomal rearr 100.0 4E-38 1.4E-42 340.8 18.5 260 601-872 40-318 (326)
234 2xrw_A Mitogen-activated prote 100.0 1.1E-37 3.7E-42 343.4 21.9 258 601-869 24-318 (371)
235 3n9x_A Phosphotransferase; mal 100.0 6.8E-38 2.3E-42 351.8 20.2 200 601-808 25-253 (432)
236 1u46_A ACK-1, activated CDC42 100.0 2.2E-38 7.6E-43 337.2 15.4 254 601-872 17-280 (291)
237 3eqc_A Dual specificity mitoge 100.0 4.7E-38 1.6E-42 345.4 18.2 258 601-869 32-324 (360)
238 1vzo_A Ribosomal protein S6 ki 100.0 2.1E-38 7.3E-43 346.6 15.3 255 602-870 54-322 (355)
239 4e7w_A Glycogen synthase kinas 100.0 9.7E-38 3.3E-42 346.1 20.4 258 601-869 39-321 (394)
240 2ycf_A Serine/threonine-protei 100.0 4E-38 1.4E-42 340.3 16.8 254 601-869 9-274 (322)
241 2vwi_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 340.7 13.0 264 599-869 12-287 (303)
242 3pg1_A Mitogen-activated prote 100.0 5E-38 1.7E-42 345.5 17.3 271 592-869 12-316 (362)
243 2pml_X PFPK7, Ser/Thr protein 100.0 4.6E-38 1.6E-42 344.0 16.3 255 601-869 30-322 (348)
244 3ll6_A Cyclin G-associated kin 100.0 1.1E-37 3.8E-42 339.3 19.3 251 601-872 27-304 (337)
245 2wei_A Calmodulin-domain prote 100.0 8.8E-38 3E-42 331.7 18.0 254 599-869 19-276 (287)
246 3fme_A Dual specificity mitoge 100.0 6.6E-38 2.3E-42 333.4 16.7 255 601-869 6-266 (290)
247 2wtk_C Serine/threonine-protei 100.0 1.9E-37 6.6E-42 332.3 20.4 252 601-869 4-263 (305)
248 3sv0_A Casein kinase I-like; t 100.0 2.4E-37 8.3E-42 348.9 22.1 257 601-872 6-274 (483)
249 2fst_X Mitogen-activated prote 100.0 4.8E-38 1.7E-42 344.5 15.8 257 601-869 28-311 (367)
250 3qyz_A Mitogen-activated prote 100.0 1.6E-37 5.5E-42 341.3 19.9 258 601-869 26-313 (364)
251 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.2E-38 2.1E-42 338.5 15.6 255 599-872 30-298 (319)
252 1zy4_A Serine/threonine-protei 100.0 2.5E-37 8.6E-42 331.1 19.9 250 601-869 5-283 (303)
253 3nsz_A CK II alpha, casein kin 100.0 3.8E-37 1.3E-41 334.0 21.5 252 602-869 36-319 (330)
254 1wak_A Serine/threonine-protei 100.0 2.5E-37 8.5E-42 344.8 20.2 258 601-869 36-391 (397)
255 3kvw_A DYRK2, dual specificity 100.0 2.1E-37 7E-42 347.0 19.6 199 601-811 96-303 (429)
256 3an0_A Dual specificity mitoge 100.0 1.4E-37 4.8E-42 338.8 17.8 255 600-869 49-310 (340)
257 3eb0_A Putative uncharacterize 100.0 1.9E-37 6.6E-42 343.1 18.9 259 599-869 4-321 (383)
258 4exu_A Mitogen-activated prote 100.0 2.4E-37 8.1E-42 340.6 19.2 256 601-869 41-323 (371)
259 1blx_A Cyclin-dependent kinase 100.0 2.1E-37 7.2E-42 335.5 18.5 264 599-869 8-296 (326)
260 1j1b_A Glycogen synthase kinas 100.0 4.4E-37 1.5E-41 343.6 21.5 256 602-869 54-336 (420)
261 1z57_A Dual specificity protei 100.0 6.5E-37 2.2E-41 333.6 22.2 256 601-869 13-328 (339)
262 3rgf_A Cyclin-dependent kinase 100.0 8.7E-38 3E-42 348.6 14.7 198 603-809 21-238 (405)
263 3e3p_A Protein kinase, putativ 100.0 2.9E-37 1E-41 339.3 18.7 266 595-869 16-314 (360)
264 3fhr_A MAP kinase-activated pr 100.0 5.2E-37 1.8E-41 333.0 20.2 251 601-869 27-287 (336)
265 3cek_A Dual specificity protei 100.0 5.3E-37 1.8E-41 330.1 19.2 251 599-869 25-292 (313)
266 2b9h_A MAP kinase FUS3, mitoge 100.0 3.9E-37 1.3E-41 337.3 18.2 259 601-869 10-305 (353)
267 3coi_A Mitogen-activated prote 100.0 6.7E-37 2.3E-41 335.1 19.9 256 601-869 23-305 (353)
268 2j0j_A Focal adhesion kinase 1 100.0 4.3E-37 1.5E-41 361.1 19.1 254 600-872 388-647 (656)
269 2i6l_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 332.8 16.9 257 601-869 10-305 (320)
270 2vx3_A Dual specificity tyrosi 100.0 3.6E-36 1.2E-40 332.7 24.0 202 600-811 52-262 (382)
271 3aln_A Dual specificity mitoge 100.0 4.6E-37 1.6E-41 332.8 15.8 256 601-869 21-285 (327)
272 2rio_A Serine/threonine-protei 100.0 1.3E-36 4.5E-41 341.3 19.9 250 602-869 15-295 (434)
273 3a99_A Proto-oncogene serine/t 100.0 3.5E-37 1.2E-41 332.2 13.7 244 600-869 41-293 (320)
274 1q8y_A SR protein kinase; tran 100.0 2E-36 6.9E-41 334.4 20.1 258 601-869 18-333 (373)
275 3p23_A Serine/threonine-protei 100.0 2.8E-36 9.5E-41 337.4 20.1 248 601-869 23-283 (432)
276 2eu9_A Dual specificity protei 100.0 5E-36 1.7E-40 328.9 21.8 257 601-869 18-333 (355)
277 2iwi_A Serine/threonine-protei 100.0 1.1E-36 3.8E-41 327.5 16.2 247 597-869 26-283 (312)
278 3o6n_A APL1; leucine-rich repe 100.0 2.2E-35 7.4E-40 327.9 25.9 310 19-345 43-352 (390)
279 3qa8_A MGC80376 protein; kinas 100.0 4.9E-37 1.7E-41 352.8 13.0 261 601-867 13-295 (676)
280 3o6n_A APL1; leucine-rich repe 100.0 2.1E-35 7.3E-40 327.9 25.3 334 116-517 44-377 (390)
281 2dyl_A Dual specificity mitoge 100.0 3.2E-36 1.1E-40 325.0 17.5 253 601-869 24-283 (318)
282 3oja_B Anopheles plasmodium-re 100.0 3E-35 1E-39 344.7 25.4 335 117-519 51-385 (597)
283 4fmz_A Internalin; leucine ric 100.0 6.4E-35 2.2E-39 318.8 26.2 306 18-369 41-346 (347)
284 4fmz_A Internalin; leucine ric 100.0 6.7E-35 2.3E-39 318.7 25.1 306 66-393 41-346 (347)
285 3uqc_A Probable conserved tran 100.0 1E-35 3.6E-40 314.4 16.9 230 602-872 31-261 (286)
286 3oja_B Anopheles plasmodium-re 100.0 2E-34 6.9E-39 337.7 26.4 288 20-321 50-337 (597)
287 3m2w_A MAP kinase-activated pr 100.0 1.3E-34 4.4E-39 309.1 19.6 230 602-869 17-256 (299)
288 2pzi_A Probable serine/threoni 100.0 7E-35 2.4E-39 346.2 19.3 236 601-870 79-322 (681)
289 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-33 4.2E-38 306.3 25.1 287 46-342 34-330 (332)
290 3dzo_A Rhoptry kinase domain; 100.0 2.9E-35 9.9E-40 328.1 12.2 244 602-869 78-363 (413)
291 2vuw_A Serine/threonine-protei 100.0 9.1E-35 3.1E-39 315.9 12.9 245 601-868 19-329 (336)
292 1xku_A Decorin; proteoglycan, 100.0 4.8E-33 1.6E-37 301.4 26.4 288 46-342 32-329 (330)
293 1xku_A Decorin; proteoglycan, 100.0 1.5E-32 5.1E-37 297.5 28.0 287 119-414 33-329 (330)
294 2ft3_A Biglycan; proteoglycan, 100.0 9.5E-33 3.3E-37 299.3 24.6 289 94-414 34-330 (332)
295 1z7x_W Ribonuclease inhibitor; 100.0 8.3E-37 2.9E-41 347.7 -11.7 158 69-226 3-183 (461)
296 1ogq_A PGIP-2, polygalacturona 100.0 3E-33 1E-37 299.9 15.4 256 237-519 50-309 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 2E-36 6.7E-41 344.7 -10.8 158 21-178 3-183 (461)
298 1ogq_A PGIP-2, polygalacturona 100.0 1E-32 3.5E-37 295.7 15.3 249 45-295 50-302 (313)
299 3ogk_B Coronatine-insensitive 100.0 1.6E-32 5.3E-37 322.9 -2.2 393 91-488 110-548 (592)
300 2z80_A TOLL-like receptor 2, v 100.0 2.5E-30 8.7E-35 282.7 15.4 283 187-496 29-319 (353)
301 3ogk_B Coronatine-insensitive 100.0 5.2E-33 1.8E-37 327.0 -6.5 402 13-417 65-526 (592)
302 2z66_A Variable lymphocyte rec 100.0 9.9E-30 3.4E-34 272.3 19.1 280 168-475 10-295 (306)
303 2z66_A Variable lymphocyte rec 100.0 6.7E-30 2.3E-34 273.6 16.9 247 24-274 10-261 (306)
304 2z80_A TOLL-like receptor 2, v 100.0 2.2E-30 7.7E-35 283.2 13.2 279 45-346 31-315 (353)
305 3zyi_A Leucine-rich repeat-con 100.0 1.3E-28 4.3E-33 278.7 24.0 247 47-298 56-304 (452)
306 3zyj_A Leucine-rich repeat-con 100.0 1.7E-28 5.7E-33 276.7 24.0 246 47-297 45-292 (440)
307 1ozn_A Reticulon 4 receptor; N 100.0 2.9E-29 9.8E-34 265.6 16.3 224 24-274 14-238 (285)
308 3zyi_A Leucine-rich repeat-con 100.0 2.4E-28 8E-33 276.5 22.7 250 22-276 55-305 (452)
309 3zyj_A Leucine-rich repeat-con 100.0 2.6E-28 8.7E-33 275.2 22.7 249 22-275 44-293 (440)
310 1ozn_A Reticulon 4 receptor; N 100.0 2.8E-28 9.6E-33 258.0 21.5 268 144-439 14-283 (285)
311 4fcg_A Uncharacterized protein 100.0 2.5E-28 8.6E-33 263.1 20.5 235 20-274 80-314 (328)
312 4fcg_A Uncharacterized protein 100.0 9.9E-28 3.4E-32 258.4 20.9 237 44-300 80-317 (328)
313 1wwl_A Monocyte differentiatio 100.0 3.2E-29 1.1E-33 268.7 6.7 251 18-298 40-310 (312)
314 3g06_A SSPH2 (leucine-rich rep 100.0 7.2E-27 2.5E-31 270.6 26.6 87 308-403 221-307 (622)
315 3o53_A Protein LRIM1, AGAP0063 100.0 3E-29 1E-33 269.6 6.1 257 95-364 12-270 (317)
316 4azs_A Methyltransferase WBDD; 100.0 1.7E-29 5.8E-34 290.9 4.3 187 610-806 242-437 (569)
317 3o53_A Protein LRIM1, AGAP0063 99.9 4.7E-29 1.6E-33 268.0 6.4 256 50-318 15-272 (317)
318 3g06_A SSPH2 (leucine-rich rep 99.9 1E-26 3.5E-31 269.3 26.2 127 284-427 181-307 (622)
319 1wwl_A Monocyte differentiatio 99.9 1.6E-28 5.6E-33 263.1 9.3 204 89-297 39-266 (312)
320 2p1m_B Transport inhibitor res 99.9 7.9E-31 2.7E-35 308.5 -12.4 442 25-489 47-542 (594)
321 2p1m_B Transport inhibitor res 99.9 4.9E-30 1.7E-34 301.8 -8.2 372 115-491 103-519 (594)
322 3oja_A Leucine-rich immune mol 99.9 2E-27 7E-32 270.1 9.1 233 22-268 35-269 (487)
323 3oja_A Leucine-rich immune mol 99.9 4.8E-27 1.7E-31 267.0 10.3 236 68-316 33-270 (487)
324 2z62_A TOLL-like receptor 4, v 99.9 1.8E-25 6.2E-30 235.2 19.1 206 70-276 29-239 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 1.6E-25 5.6E-30 235.5 18.5 211 13-226 22-237 (276)
326 2o6q_A Variable lymphocyte rec 99.9 1.8E-24 6.3E-29 226.5 22.5 201 47-250 18-218 (270)
327 2o6q_A Variable lymphocyte rec 99.9 2.3E-24 7.8E-29 225.8 22.6 201 71-274 18-218 (270)
328 1p9a_G Platelet glycoprotein I 99.9 3.1E-24 1E-28 226.7 20.0 202 17-225 6-207 (290)
329 3en9_A Glycoprotease, O-sialog 99.9 1.3E-25 4.3E-30 257.3 9.7 187 605-808 339-539 (540)
330 3rfs_A Internalin B, repeat mo 99.9 1.1E-24 3.7E-29 228.4 15.1 226 22-260 20-245 (272)
331 1p9a_G Platelet glycoprotein I 99.9 4.1E-24 1.4E-28 225.7 19.6 204 40-250 5-208 (290)
332 3rfs_A Internalin B, repeat mo 99.9 1.4E-24 4.7E-29 227.6 15.6 221 6-239 28-248 (272)
333 2xwt_C Thyrotropin receptor; s 99.9 6.5E-24 2.2E-28 218.1 15.5 196 46-247 32-236 (239)
334 2xwt_C Thyrotropin receptor; s 99.9 8.3E-24 2.8E-28 217.2 14.6 196 22-223 32-236 (239)
335 3goz_A Leucine-rich repeat-con 99.9 2.6E-25 9E-30 243.5 2.1 251 5-275 6-298 (362)
336 3goz_A Leucine-rich repeat-con 99.9 5.7E-25 2E-29 240.8 4.4 249 51-299 4-299 (362)
337 4glp_A Monocyte differentiatio 99.9 1.3E-23 4.5E-28 224.8 12.9 225 45-275 64-308 (310)
338 2ca6_A RAN GTPase-activating p 99.9 6.1E-25 2.1E-29 243.2 -0.7 247 28-275 16-317 (386)
339 2ca6_A RAN GTPase-activating p 99.9 1.6E-24 5.6E-29 239.8 0.9 243 134-396 25-319 (386)
340 1h6u_A Internalin H; cell adhe 99.9 1.4E-22 4.8E-27 216.2 15.7 210 24-251 22-231 (308)
341 3m19_A Variable lymphocyte rec 99.9 4.9E-22 1.7E-26 205.6 19.3 177 47-226 16-192 (251)
342 3m19_A Variable lymphocyte rec 99.9 3.8E-22 1.3E-26 206.4 18.4 180 22-204 15-194 (251)
343 2ast_B S-phase kinase-associat 99.9 3.4E-24 1.2E-28 232.6 2.9 250 239-497 49-312 (336)
344 4glp_A Monocyte differentiatio 99.9 1.2E-22 4.1E-27 217.4 14.7 226 21-251 64-308 (310)
345 2ast_B S-phase kinase-associat 99.9 3.7E-24 1.3E-28 232.3 2.3 221 23-247 49-282 (336)
346 1h6u_A Internalin H; cell adhe 99.9 3.5E-22 1.2E-26 213.1 17.2 37 68-106 40-76 (308)
347 4ay9_X Follicle-stimulating ho 99.9 4.8E-22 1.6E-26 216.4 17.6 239 49-294 13-256 (350)
348 4ay9_X Follicle-stimulating ho 99.9 4.6E-22 1.6E-26 216.5 16.7 203 120-325 12-219 (350)
349 1zar_A RIO2 kinase; serine kin 99.9 1.5E-22 5E-27 212.3 11.8 154 596-780 84-252 (282)
350 2o6s_A Variable lymphocyte rec 99.8 1E-20 3.5E-25 189.6 15.0 178 24-211 10-187 (208)
351 2o6s_A Variable lymphocyte rec 99.8 2.1E-20 7.1E-25 187.3 15.8 177 48-234 10-186 (208)
352 3cvr_A Invasion plasmid antige 99.8 3.9E-21 1.3E-25 219.7 8.8 183 46-256 60-249 (571)
353 1h6t_A Internalin B; cell adhe 99.8 3.9E-20 1.3E-24 195.4 12.1 186 25-226 28-213 (291)
354 3cvr_A Invasion plasmid antige 99.8 7.7E-20 2.6E-24 209.0 15.4 188 22-237 60-254 (571)
355 1h6t_A Internalin B; cell adhe 99.8 5.6E-20 1.9E-24 194.1 12.7 171 138-321 43-213 (291)
356 1m9s_A Internalin B; cell inva 99.8 1.1E-19 3.8E-24 210.2 15.0 192 92-298 20-211 (605)
357 1m9s_A Internalin B; cell inva 99.8 1.7E-19 6E-24 208.6 15.6 199 116-329 20-218 (605)
358 2xot_A Amphoterin-induced prot 99.8 8.4E-20 2.9E-24 199.5 11.8 176 48-226 21-202 (361)
359 2v9t_B SLIT homolog 2 protein 99.8 3E-19 1E-23 180.1 14.9 152 24-178 14-165 (220)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 4.4E-19 1.5E-23 178.9 14.6 152 24-178 14-166 (220)
361 2xot_A Amphoterin-induced prot 99.8 1.7E-19 5.6E-24 197.1 12.0 177 72-251 21-203 (361)
362 2v9t_B SLIT homolog 2 protein 99.8 5.1E-19 1.8E-23 178.4 14.6 133 94-226 33-165 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 8.1E-19 2.8E-23 177.0 14.5 133 95-227 34-167 (220)
364 3e6j_A Variable lymphocyte rec 99.8 1.9E-18 6.5E-23 175.5 16.0 152 23-178 21-172 (229)
365 1xeu_A Internalin C; cellular 99.8 4.1E-20 1.4E-24 192.0 2.8 169 20-227 18-186 (263)
366 1dce_A Protein (RAB geranylger 99.8 1.2E-20 3.9E-25 217.2 -3.2 108 166-278 442-550 (567)
367 3sb4_A Hypothetical leucine ri 99.8 4.6E-19 1.6E-23 191.1 9.6 287 92-410 24-327 (329)
368 1dce_A Protein (RAB geranylger 99.8 9E-21 3.1E-25 218.1 -4.7 203 43-268 347-567 (567)
369 4ezg_A Putative uncharacterize 99.8 9.1E-19 3.1E-23 173.6 9.7 154 41-202 40-194 (197)
370 4fdw_A Leucine rich hypothetic 99.8 2E-17 6.9E-22 181.9 21.3 266 20-298 112-384 (401)
371 3e6j_A Variable lymphocyte rec 99.8 7.3E-18 2.5E-22 171.2 16.4 133 117-250 40-172 (229)
372 1xeu_A Internalin C; cellular 99.8 1E-18 3.5E-23 181.4 10.2 169 117-299 19-187 (263)
373 3sb4_A Hypothetical leucine ri 99.8 1.5E-18 5.3E-23 187.0 11.9 259 20-290 48-327 (329)
374 1zth_A RIO1 serine protein kin 99.8 3.2E-18 1.1E-22 177.1 13.1 142 601-757 46-219 (258)
375 4fs7_A Uncharacterized protein 99.8 5.5E-17 1.9E-21 179.4 23.4 332 60-409 62-393 (394)
376 4ezg_A Putative uncharacterize 99.7 2.6E-18 8.8E-23 170.3 10.7 155 65-227 40-195 (197)
377 4fdw_A Leucine rich hypothetic 99.7 5.8E-17 2E-21 178.2 21.9 263 69-344 113-382 (401)
378 4fs7_A Uncharacterized protein 99.7 5E-17 1.7E-21 179.8 21.4 336 32-385 58-393 (394)
379 4b8c_D Glucose-repressible alc 99.7 9.9E-19 3.4E-23 207.6 8.1 229 237-496 173-409 (727)
380 4b8c_D Glucose-repressible alc 99.7 3.8E-18 1.3E-22 202.6 6.2 223 213-467 173-404 (727)
381 1w8a_A SLIT protein; signaling 99.7 9.1E-18 3.1E-22 165.4 6.3 131 335-470 11-142 (192)
382 2ell_A Acidic leucine-rich nuc 99.7 1.4E-16 4.9E-21 153.3 10.3 131 21-153 24-159 (168)
383 1w8a_A SLIT protein; signaling 99.7 6.4E-16 2.2E-20 152.1 13.6 109 285-393 30-139 (192)
384 2ell_A Acidic leucine-rich nuc 99.6 3.7E-16 1.3E-20 150.4 11.2 131 70-202 25-160 (168)
385 4gyi_A RIO2 kinase; protein ki 99.6 2.8E-16 9.5E-21 168.0 9.5 144 601-758 94-266 (397)
386 2wfh_A SLIT homolog 2 protein 99.6 9E-16 3.1E-20 151.0 12.1 108 70-178 32-139 (193)
387 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 4.6E-20 149.7 12.8 125 25-153 14-138 (193)
388 2je0_A Acidic leucine-rich nuc 99.6 2.6E-16 8.9E-21 148.1 6.9 126 21-148 17-147 (149)
389 2je0_A Acidic leucine-rich nuc 99.6 3.9E-16 1.3E-20 146.9 7.5 127 45-173 17-148 (149)
390 4gt6_A Cell surface protein; l 99.6 3.3E-14 1.1E-18 157.1 23.9 319 62-393 56-391 (394)
391 4gt6_A Cell surface protein; l 99.6 5E-14 1.7E-18 155.7 24.3 322 33-367 51-389 (394)
392 2o6r_A Variable lymphocyte rec 99.6 6.8E-15 2.3E-19 142.8 13.5 39 138-176 97-135 (177)
393 2o6r_A Variable lymphocyte rec 99.6 6.2E-15 2.1E-19 143.1 13.1 131 23-156 9-139 (177)
394 1a9n_A U2A', U2A'; complex (nu 99.6 2.3E-15 7.8E-20 146.0 6.4 109 18-130 16-126 (176)
395 1ds9_A Outer arm dynein; leuci 99.6 1.2E-16 4.2E-21 158.3 -2.7 151 332-491 18-185 (198)
396 1a9n_A U2A', U2A'; complex (nu 99.6 4.7E-15 1.6E-19 143.8 8.1 137 38-178 12-153 (176)
397 1ds9_A Outer arm dynein; leuci 99.5 9.4E-17 3.2E-21 159.1 -5.0 134 17-155 14-154 (198)
398 3g39_A Variable lymphocyte rec 99.4 3.4E-13 1.2E-17 129.5 10.7 105 23-130 11-115 (170)
399 4h09_A Hypothetical leucine ri 99.4 1.1E-11 3.9E-16 136.0 24.3 304 39-355 40-355 (379)
400 2r9u_A Variable lymphocyte rec 99.4 3.8E-13 1.3E-17 129.6 10.3 104 24-130 15-118 (174)
401 3g39_A Variable lymphocyte rec 99.4 4.3E-13 1.5E-17 128.8 10.6 104 47-153 11-114 (170)
402 2r9u_A Variable lymphocyte rec 99.4 7.8E-13 2.7E-17 127.4 10.7 104 48-154 15-118 (174)
403 4h09_A Hypothetical leucine ri 99.4 3.8E-11 1.3E-15 131.9 24.5 305 16-334 41-358 (379)
404 3un9_A NLR family member X1; l 99.4 7.3E-15 2.5E-19 159.8 -7.8 15 261-275 72-86 (372)
405 3un9_A NLR family member X1; l 99.3 1.4E-14 4.9E-19 157.5 -7.1 62 213-274 72-139 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 4E-11 1.4E-15 124.3 12.3 145 599-755 11-212 (263)
407 2ifg_A High affinity nerve gro 99.2 2.3E-11 7.7E-16 131.9 10.4 103 25-130 12-116 (347)
408 2ifg_A High affinity nerve gro 99.2 2.8E-11 9.7E-16 131.1 9.2 103 49-154 12-116 (347)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 3.5E-10 1.2E-14 117.2 8.9 136 603-755 21-213 (264)
410 2ra8_A Uncharacterized protein 99.0 1.5E-10 5E-15 124.7 5.1 114 255-370 166-293 (362)
411 3dxp_A Putative acyl-COA dehyd 99.0 2E-09 6.7E-14 117.1 11.7 143 606-756 42-248 (359)
412 2ra8_A Uncharacterized protein 99.0 2.2E-10 7.4E-15 123.4 3.9 59 207-269 166-227 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 2.3E-09 7.9E-14 113.5 5.4 185 607-808 25-288 (304)
414 3r70_A Aminoglycoside phosphot 98.5 6.4E-07 2.2E-11 95.3 13.5 138 603-758 38-239 (320)
415 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5E-13 98.3 0.1 65 281-345 62-136 (185)
416 1io0_A Tropomodulin; LRR prote 98.5 6.2E-09 2.1E-13 101.0 -2.7 113 305-417 33-164 (185)
417 3rw6_A Nuclear RNA export fact 98.4 4.8E-08 1.7E-12 99.4 0.2 79 402-484 168-257 (267)
418 4gkh_A Aminoglycoside 3'-phosp 98.3 2.9E-06 9.9E-11 87.9 13.2 135 608-755 30-222 (272)
419 3d1u_A Putative fructosamine-3 98.3 3.7E-06 1.3E-10 87.4 12.8 78 604-688 17-97 (288)
420 3rw6_A Nuclear RNA export fact 98.3 7.1E-08 2.4E-12 98.1 -1.1 40 67-106 168-209 (267)
421 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.7E-06 2.3E-10 88.7 13.4 145 605-758 44-245 (362)
422 3tdw_A Gentamicin resistance p 98.2 9E-06 3.1E-10 85.6 13.5 137 607-757 24-225 (306)
423 3ats_A Putative uncharacterize 98.0 8.2E-06 2.8E-10 88.2 8.5 83 608-690 26-122 (357)
424 3e4g_A ATP synthase subunit S, 98.0 7.3E-07 2.5E-11 83.9 0.1 83 46-128 62-150 (176)
425 3e4g_A ATP synthase subunit S, 97.9 1.7E-06 5.9E-11 81.3 1.3 83 333-415 62-150 (176)
426 2q83_A YTAA protein; 2635576, 97.9 5.9E-05 2E-09 80.9 12.0 140 608-755 38-251 (346)
427 2olc_A MTR kinase, methylthior 97.8 8.5E-05 2.9E-09 81.4 11.0 78 607-686 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.7 0.00018 6.3E-09 75.2 12.2 138 607-752 41-232 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.7 1.1E-05 3.7E-10 77.4 1.6 42 280-321 66-111 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.6 4.3E-06 1.5E-10 80.2 -1.4 64 307-370 40-112 (197)
431 3f7w_A Putative fructosamine-3 97.5 0.00046 1.6E-08 71.8 11.7 81 601-688 14-97 (288)
432 2pyw_A Uncharacterized protein 97.4 0.00097 3.3E-08 73.5 12.8 76 726-803 232-312 (420)
433 3csv_A Aminoglycoside phosphot 97.1 0.0014 4.8E-08 69.7 9.9 142 608-757 24-218 (333)
434 1nw1_A Choline kinase (49.2 KD 97.0 0.0016 5.4E-08 71.7 9.2 73 607-688 78-159 (429)
435 1zyl_A Hypothetical protein YI 97.0 0.0065 2.2E-07 64.2 13.6 142 608-756 32-223 (328)
436 2ppq_A HSK, HK, homoserine kin 96.9 0.0068 2.3E-07 63.9 13.3 158 592-755 7-216 (322)
437 3dxq_A Choline/ethanolamine ki 96.9 0.0031 1.1E-07 65.9 10.4 71 607-688 23-95 (301)
438 3rfe_A Platelet glycoprotein I 96.9 0.00076 2.6E-08 60.4 4.6 37 455-491 32-68 (130)
439 3feg_A Choline/ethanolamine ki 96.8 0.0036 1.2E-07 67.3 10.2 141 608-756 56-254 (379)
440 3rfe_A Platelet glycoprotein I 96.7 0.0017 5.9E-08 58.0 5.5 57 24-82 11-68 (130)
441 2qg7_A Ethanolamine kinase PV0 96.5 0.014 4.8E-07 64.4 11.8 74 607-688 113-188 (458)
442 3i1a_A Spectinomycin phosphotr 96.2 0.013 4.3E-07 62.3 9.4 32 726-757 206-237 (339)
443 3c5i_A Choline kinase; choline 96.2 0.007 2.4E-07 65.2 7.4 73 608-688 39-121 (369)
444 2yle_A Protein spire homolog 1 96.0 0.024 8.1E-07 54.5 9.2 103 686-806 33-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.6 0.029 9.8E-07 60.5 8.9 144 608-755 58-279 (401)
446 3mes_A Choline kinase; malaria 94.5 0.082 2.8E-06 57.5 8.7 73 608-688 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 91.3 0.61 2.1E-05 50.4 9.8 29 728-756 246-280 (401)
448 4ann_A ESSB; membrane protein, 89.7 0.77 2.6E-05 44.1 7.5 116 659-808 43-158 (215)
449 2ks1_B Epidermal growth factor 86.8 0.44 1.5E-05 32.5 2.7 24 544-567 17-40 (44)
450 2l2t_A Receptor tyrosine-prote 85.5 0.49 1.7E-05 32.2 2.4 23 546-568 18-40 (44)
451 4ano_A ESSB; membrane protein, 83.8 2.1 7.2E-05 41.2 7.0 115 659-808 48-163 (219)
452 2jwa_A Receptor tyrosine-prote 83.7 0.81 2.8E-05 31.0 2.8 25 542-566 15-39 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 73.4 0.44 1.5E-05 52.5 -1.5 64 605-672 145-215 (463)
454 2lz0_A Uncharacterized protein 69.4 11 0.00038 31.1 6.5 37 135-172 14-50 (100)
455 2lz0_A Uncharacterized protein 64.8 13 0.00046 30.6 6.2 47 31-78 6-52 (100)
456 2k9y_A Ephrin type-A receptor 57.4 4.2 0.00014 27.2 1.4 21 544-564 19-39 (41)
457 2k1k_A Ephrin type-A receptor 52.6 9.6 0.00033 25.0 2.5 7 543-549 15-21 (38)
458 1iij_A ERBB-2 receptor protein 48.5 5.1 0.00017 25.6 0.6 22 544-565 13-34 (35)
459 2ks1_B Epidermal growth factor 42.3 8.5 0.00029 26.2 1.0 32 537-568 13-44 (44)
460 2l2t_A Receptor tyrosine-prote 32.1 33 0.0011 23.3 2.6 32 537-568 12-43 (44)
461 2jo1_A Phospholemman; FXYD1, N 28.0 58 0.002 24.4 3.5 14 547-560 24-37 (72)
462 2k1a_A Integrin alpha-IIB; sin 27.7 17 0.00057 24.5 0.6 17 537-553 10-26 (42)
463 2knc_A Integrin alpha-IIB; tra 26.5 63 0.0022 23.0 3.4 22 537-558 12-33 (54)
464 2l8s_A Integrin alpha-1; trans 26.4 52 0.0018 23.4 2.9 17 538-554 10-26 (54)
465 2l6w_A Beta-type platelet-deri 28.8 17 0.0006 23.6 0.0 12 554-565 24-35 (39)
466 3ls8_A Phosphatidylinositol 3- 22.8 4.7E+02 0.016 29.2 11.4 84 664-755 402-501 (614)
467 2fq3_A Transcription regulator 21.6 1.4E+02 0.0047 24.7 5.1 48 821-871 30-77 (104)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.5e-67 Score=632.63 Aligned_cols=518 Identities=31% Similarity=0.433 Sum_probs=385.7
Q ss_pred ccCCcccccCCccc-cCCCCCCEEECCCCcccccCCcc---ccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccC
Q 039344 4 IYNNSLYDSIPSEL-RNLKSLSDLELGNNKLSGSIPHS---LGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNN 79 (873)
Q Consensus 4 ~~~n~~~~~~p~~~-~~l~~l~~L~L~~n~l~~~~p~~---~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 79 (873)
+++|.+.+.+|..+ .++++|++|+|++|++++..|.. +.++++|++|++++|++++..|. ..+++|++|+|++|
T Consensus 133 Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n 210 (768)
T 3rgz_A 133 VSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSN 210 (768)
T ss_dssp CCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSS
T ss_pred CcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCC
Confidence 35677777777665 67777777777777777666655 55666666666666666544332 45555555555555
Q ss_pred CCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccccccccc----------------------ccCccc
Q 039344 80 KLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSG----------------------SIPHSL 137 (873)
Q Consensus 80 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~----------------------~~~~~~ 137 (873)
.+++.+|. |.++++|++|+|++|++++.+|..|.++++|++|++++|.+++ .+|..+
T Consensus 211 ~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~ 289 (768)
T 3rgz_A 211 NFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFL 289 (768)
T ss_dssp CCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCS
T ss_pred cCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHH
Confidence 55544444 5555555555555555555555555555555555555555544 444444
Q ss_pred cCC-CCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCcc-ccCCCCCcEEeccCCCCcccCCccccCCC-C
Q 039344 138 GNL-TNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPS-LGNLSNLATLYLDTNSLSYSIPSELGNLR-S 214 (873)
Q Consensus 138 ~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~ 214 (873)
..+ ++|++|+|++|++++..+..|+.+++|++|+|++|++++.+|.. +..+++|++|++++|.+++..|..+..++ +
T Consensus 290 ~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~ 369 (768)
T 3rgz_A 290 SGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 369 (768)
T ss_dssp CTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTT
T ss_pred HhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcC
Confidence 332 55555555555554444455555555555555555554444433 55555555555555555544555555444 5
Q ss_pred CCEEEccCcccCCCcccccCC--CCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCc-CCcCCCCCCCCeEEc
Q 039344 215 LSNLSLGYNKLSGSIPISMGN--LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP-IPILRNLTSLERVRL 291 (873)
Q Consensus 215 L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~l~~l~~L~~L~L 291 (873)
|++|++++|++++..|..+.. +++|++|++++|.+++..|..+..+++|+.|++++|++.+. +..+..+++|+.|++
T Consensus 370 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 449 (768)
T 3rgz_A 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449 (768)
T ss_dssp CSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEEC
Confidence 555555555555444444444 56777788888887777888888888899999999988864 446888889999999
Q ss_pred cCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCC
Q 039344 292 DRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGE 371 (873)
Q Consensus 292 ~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~ 371 (873)
++|.+++..+..+..+++|++|++++|++++.+|..+..+++|+.|++++|++++.+|..++.+++|++|+|++|++++.
T Consensus 450 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 529 (768)
T 3rgz_A 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEE
T ss_pred CCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCc
Confidence 99998888888888889999999999999888888899999999999999999988999999999999999999999888
Q ss_pred CCccccccccccEEEecCccccCCccccc---------------------------------------------------
Q 039344 372 IPIELGKLNFFIKLVLAHNQLSGQLSPKL--------------------------------------------------- 400 (873)
Q Consensus 372 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~--------------------------------------------------- 400 (873)
+|..+..+++|+.|++++|++++.+|..+
T Consensus 530 ~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 609 (768)
T 3rgz_A 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLST 609 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGG
T ss_pred CCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccc
Confidence 99999999999999999998887666543
Q ss_pred -------------------ccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecc
Q 039344 401 -------------------GSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNL 461 (873)
Q Consensus 401 -------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 461 (873)
..+.+|+.||||+|+++|.+|.+++++. +|+.|||++|++++.+|..++.+++|+.|||
T Consensus 610 ~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~--~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdL 687 (768)
T 3rgz_A 610 RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP--YLFILNLGHNDISGSIPDEVGDLRGLNILDL 687 (768)
T ss_dssp TCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCT--TCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred ccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccc--cCCEEeCcCCccCCCCChHHhCCCCCCEEEC
Confidence 3356789999999999999999999887 9999999999999999999999999999999
Q ss_pred cCccccCCCchhhhccCCCcEEecCCCcccccCCCCCcccCCCcccccCCCCcccCccCcccccccc
Q 039344 462 SHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFKDAPIEALQGNKGLYGDVKGLLSCKALK 528 (873)
Q Consensus 462 ~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~g~~~~~~~c~~~~ 528 (873)
++|+++|.+|..|..+++|++|||++|+++|.||.+++|..++..+|.||+++||.+.. +|....
T Consensus 688 s~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~--~C~~~~ 752 (768)
T 3rgz_A 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP--RCDPSN 752 (768)
T ss_dssp CSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC--CCCSCC
T ss_pred CCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc--CCCCCc
Confidence 99999999999999999999999999999999999999999999999999999998743 786544
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.2e-62 Score=587.21 Aligned_cols=510 Identities=32% Similarity=0.450 Sum_probs=417.5
Q ss_pred ccCCcccccCCc--cccCCCCCCEEECCCCcccccCCccc-cCCCCCceEEccCCcccccCCCC---ccCCCCCCEEEcc
Q 039344 4 IYNNSLYDSIPS--ELRNLKSLSDLELGNNKLSGSIPHSL-GNLTNLATLYIHTNSLSGSIPGE---IGNFRFFSDLELS 77 (873)
Q Consensus 4 ~~~n~~~~~~p~--~~~~l~~l~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~---~~~l~~L~~L~L~ 77 (873)
+++|.+++.+|. .++++++|++|+|++|.+++..|..+ .++++|++|+|++|++++..|.. +.++++|++|+++
T Consensus 107 Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls 186 (768)
T 3rgz_A 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAIS 186 (768)
T ss_dssp CCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECC
T ss_pred CCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECC
Confidence 578999999999 99999999999999999998888776 89999999999999999888877 8899999999999
Q ss_pred cCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCcccc
Q 039344 78 NNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASI 157 (873)
Q Consensus 78 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (873)
+|.+++..+ +..+++|++|+|++|++++.+|. +.++++|++|++++|.+++..|..|+.+++|++|++++|++.+..
T Consensus 187 ~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 263 (768)
T 3rgz_A 187 GNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263 (768)
T ss_dssp SSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESC
T ss_pred CCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCcc
Confidence 999997655 48899999999999999987777 999999999999999999999999999999999999999997655
Q ss_pred ccccCCCCCCCEEEccCCcCccCCCccccCC-CCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccc-cCC
Q 039344 158 LGKIGNLKSLSNLQLSENNFNGSIPPSLGNL-SNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPIS-MGN 235 (873)
Q Consensus 158 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~ 235 (873)
+.. .+++|++|+|++|++++.+|..+... ++|++|++++|.+++..|..|+.+++|++|++++|++.+.+|.. +..
T Consensus 264 ~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~ 341 (768)
T 3rgz_A 264 PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLK 341 (768)
T ss_dssp CCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTT
T ss_pred Ccc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhc
Confidence 443 67778888888888777777776654 77777777777777777777777777777777777776555543 677
Q ss_pred CCCccEEecccccCCCCCchhhcCCC-C--------------------------CcEEEccCCcCcC-cCCcCCCCCCCC
Q 039344 236 LSNLTYLNLFENSLSGAIPYEYRNLV-K--------------------------LTILLLGHNQFRG-PIPILRNLTSLE 287 (873)
Q Consensus 236 l~~L~~L~L~~n~l~~~~~~~~~~l~-~--------------------------L~~L~L~~N~l~~-~~~~l~~l~~L~ 287 (873)
+++|++|++++|++++..|..+..++ + |++|++++|++.+ .+..+..+++|+
T Consensus 342 l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 421 (768)
T 3rgz_A 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421 (768)
T ss_dssp CTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCC
T ss_pred CCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCC
Confidence 77777777777777666666555544 4 5555555555544 233566777788
Q ss_pred eEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCc
Q 039344 288 RVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNH 367 (873)
Q Consensus 288 ~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 367 (873)
+|++++|.+++..+..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|++++.+|..++.+++|++|+|++|+
T Consensus 422 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 501 (768)
T 3rgz_A 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501 (768)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCc
Confidence 88888888777777777788888888888888887888888888888888888888888888888888888888888888
Q ss_pred cCCCCCccccccccccEEEecCccccCCcccccccccccccccccccccccccCCCcCchh-------------------
Q 039344 368 IVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLE------------------- 428 (873)
Q Consensus 368 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------------------- 428 (873)
+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|||++|+++|.+|..+....
T Consensus 502 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (768)
T 3rgz_A 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECC
T ss_pred cCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccc
Confidence 8888888888888899999999988888888888899999999999998888776543210
Q ss_pred -------------------------------------------------hhhhhcccccCCccCcccchhhhhhccccee
Q 039344 429 -------------------------------------------------LIHLSELDLSRNFLREAIPSQICIMQSLEKL 459 (873)
Q Consensus 429 -------------------------------------------------~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 459 (873)
+.+|+.|||++|++++.+|..++.+++|+.|
T Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 661 (768)
T 3rgz_A 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661 (768)
T ss_dssp SCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEE
T ss_pred cccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEE
Confidence 1367889999999999999999999999999
Q ss_pred cccCccccCCCchhhhccCCCcEEecCCCcccccCCCC-CcccCCCcccccCCCCcccCcc
Q 039344 460 NLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNS-TTFKDAPIEALQGNKGLYGDVK 519 (873)
Q Consensus 460 ~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~l~g~~~ 519 (873)
+|++|+++|.+|..|..+++|+.||||+|+++|.+|.. ..++......+.+|. +.|.+|
T Consensus 662 ~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~-l~g~iP 721 (768)
T 3rgz_A 662 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN-LSGPIP 721 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE-EEEECC
T ss_pred eCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc-ccccCC
Confidence 99999999999999999999999999999999999975 234445555566653 444443
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-57 Score=537.96 Aligned_cols=478 Identities=22% Similarity=0.224 Sum_probs=420.7
Q ss_pred cCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCccccc
Q 039344 12 SIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGN 91 (873)
Q Consensus 12 ~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 91 (873)
.+|..+. +.+++|+|++|+|+++.|.+|.++++|++|+|++|+++++.|++|+++++|++|+|++|++++..|.+|.+
T Consensus 26 ~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 26 EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 5677676 37899999999999888889999999999999999998888889999999999999999998888889999
Q ss_pred ccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCC--E
Q 039344 92 LSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLS--N 169 (873)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~ 169 (873)
+++|++|++++|++++..+..|.++++|++|++++|.+++.....+..+++|++|++++|.++.+.+..|+.+++|+ .
T Consensus 104 l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~ 183 (606)
T 3t6q_A 104 PKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183 (606)
T ss_dssp CTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE
T ss_pred cccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeE
Confidence 99999999999999876678888999999999999998864444555689999999999999888888888888888 8
Q ss_pred EEccCCcCccCCCccccCC---------------------------------------------------CCCcEEeccC
Q 039344 170 LQLSENNFNGSIPPSLGNL---------------------------------------------------SNLATLYLDT 198 (873)
Q Consensus 170 L~L~~n~i~~~~~~~~~~l---------------------------------------------------~~L~~L~L~~ 198 (873)
|++++|.+++..|..+... .+|+.|++++
T Consensus 184 L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~ 263 (606)
T 3t6q_A 184 LNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQK 263 (606)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTT
T ss_pred EecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeec
Confidence 8999999887766655431 1678899999
Q ss_pred CCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcC-
Q 039344 199 NSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPI- 277 (873)
Q Consensus 199 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~- 277 (873)
|.+++..+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..+..+..+++|++|++++|.+.+..
T Consensus 264 n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 342 (606)
T 3t6q_A 264 HYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELG 342 (606)
T ss_dssp CCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCC
T ss_pred CccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccc
Confidence 9999888888999999999999999998 67788999999999999999999888889999999999999999988633
Q ss_pred -CcCCCCCCCCeEEccCccccccc--ccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCcc-cc
Q 039344 278 -PILRNLTSLERVRLDRNYLTGNI--SESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPE-IG 353 (873)
Q Consensus 278 -~~l~~l~~L~~L~L~~n~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~-~~ 353 (873)
..+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..+..|..+++|+.|++++|++++..+.. ++
T Consensus 343 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 422 (606)
T 3t6q_A 343 TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422 (606)
T ss_dssp SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTT
T ss_pred hhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhh
Confidence 35889999999999999999876 677889999999999999999888999999999999999999998766544 88
Q ss_pred CCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCC---cccccccccccccccccccccccccCCCcCchhhh
Q 039344 354 HSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQ---LSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELI 430 (873)
Q Consensus 354 ~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~ 430 (873)
.+++|++|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|+|++|++++..|..|+.+.
T Consensus 423 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-- 500 (606)
T 3t6q_A 423 NLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK-- 500 (606)
T ss_dssp TCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT--
T ss_pred CcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc--
Confidence 999999999999999988899999999999999999999863 235688899999999999999988899998876
Q ss_pred hhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCC
Q 039344 431 HLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIP 495 (873)
Q Consensus 431 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p 495 (873)
+|++|+|++|++++..|..+..+++| .|+|++|++++.+|..|..+++|+.|++++|++.+..+
T Consensus 501 ~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp TCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999 99999999999999999999999999999999987655
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.5e-57 Score=540.83 Aligned_cols=511 Identities=22% Similarity=0.228 Sum_probs=375.3
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG 83 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 83 (873)
+++|++++..|..|.++++|++|+|++|.+++..|++|.++++|++|+|++|++++..+.+|+++++|++|+|++|++++
T Consensus 32 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~ 111 (680)
T 1ziw_A 32 LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQK 111 (680)
T ss_dssp CCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC
T ss_pred CCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCc
Confidence 56788888888888888888888888888888888888888888888888888886555678888888888888888887
Q ss_pred CCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCcccc--CCCCCcEEEccCCCCcccccccc
Q 039344 84 SIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLG--NLTNLATLYIYSNSLSASILGKI 161 (873)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~ 161 (873)
..|.+|.++++|++|+|++|.+++..|..+.++++|++|++++|.+++..+..+. .+++|++|++++|+++++.+..|
T Consensus 112 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 191 (680)
T 1ziw_A 112 IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCF 191 (680)
T ss_dssp CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGG
T ss_pred cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhh
Confidence 7777888888888888888888877777888888888888888888766665544 45778888888887776665554
Q ss_pred CCC---------------------------CCCCEEEccCCcCccCCCccccCCCC--CcEEeccCCCCcccCCccccCC
Q 039344 162 GNL---------------------------KSLSNLQLSENNFNGSIPPSLGNLSN--LATLYLDTNSLSYSIPSELGNL 212 (873)
Q Consensus 162 ~~l---------------------------~~L~~L~L~~n~i~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~~~~~l 212 (873)
..+ ++|++|++++|.+++..|.+|.+++. |++|++++|.+++..+..|+.+
T Consensus 192 ~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l 271 (680)
T 1ziw_A 192 HAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWL 271 (680)
T ss_dssp GGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCc
Confidence 432 34455555555555555555555433 6666666666665555556666
Q ss_pred CCCCEEEccCcccCCCccccc---------------------------------CCCCCccEEecccccCCCCCchhhcC
Q 039344 213 RSLSNLSLGYNKLSGSIPISM---------------------------------GNLSNLTYLNLFENSLSGAIPYEYRN 259 (873)
Q Consensus 213 ~~L~~L~L~~N~l~~~~~~~~---------------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~ 259 (873)
++|++|++++|++.+..+..+ ..+++|++|++++|.+++..+..|.+
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 351 (680)
T 1ziw_A 272 PQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTG 351 (680)
T ss_dssp TTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTT
T ss_pred ccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhcc
Confidence 666666666666554444444 44555555555556665555555666
Q ss_pred CCCCcEEEccCCcCcC--c-CCcCCC--CCCCCeEEccCcccccccccccccCCCccEEeccCccccccCC-CCCCCCCC
Q 039344 260 LVKLTILLLGHNQFRG--P-IPILRN--LTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEIS-SDWGRCPK 333 (873)
Q Consensus 260 l~~L~~L~L~~N~l~~--~-~~~l~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~ 333 (873)
+++|++|++++|.+.. . ...+.. .++|+.|++++|.++++.+..|..+++|++|++++|.+.+.++ ..|..+++
T Consensus 352 l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 431 (680)
T 1ziw_A 352 LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLEN 431 (680)
T ss_dssp CTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTT
T ss_pred ccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCccc
Confidence 6666666666665432 1 112222 2456667777777777777777778888888888888876544 56777888
Q ss_pred CCeeeeccccCCccCCccccCCCCCCEEeccCCccC--CCCCccccccccccEEEecCccccCCcccccccccccccccc
Q 039344 334 LSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIV--GEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDL 411 (873)
Q Consensus 334 L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 411 (873)
|+.|++++|++++..+..|..+++|+.|++++|.+. +.+|..+..+++|+.|++++|++++..+..+..+++|+.|+|
T Consensus 432 L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L 511 (680)
T 1ziw_A 432 IFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDL 511 (680)
T ss_dssp CCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeC
Confidence 888888888887777777888888888888888876 467888889999999999999999877788899999999999
Q ss_pred cccccccccCC--------CcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEE
Q 039344 412 SSNRLSNSIPK--------SLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHI 483 (873)
Q Consensus 412 s~N~l~~~~~~--------~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l 483 (873)
++|++++..+. .+.++. +|+.|+|++|++++..+..|..+++|+.|+|++|+|+++++..|..+++|++|
T Consensus 512 s~N~l~~~~~~~~~~~~~~~~~~l~--~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 589 (680)
T 1ziw_A 512 QHNNLARLWKHANPGGPIYFLKGLS--HLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSL 589 (680)
T ss_dssp CSSCCGGGGSTTSTTSCCCTTTTCT--TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCccccchhhccCCcchhhcCCC--CCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEE
Confidence 99999754322 255554 89999999999997666778999999999999999998888888999999999
Q ss_pred ecCCCcccccCCCCC--cccCCCcccccCCCCccc
Q 039344 484 DISYNELRGSIPNST--TFKDAPIEALQGNKGLYG 516 (873)
Q Consensus 484 ~ls~N~l~~~~p~~~--~~~~~~~~~~~~n~~l~g 516 (873)
+|++|++++..|..- .++......+.+|+-.|.
T Consensus 590 ~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 590 NLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp ECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999999998665432 355666677788876664
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.5e-55 Score=523.49 Aligned_cols=491 Identities=25% Similarity=0.249 Sum_probs=401.8
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG 83 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 83 (873)
+++|.+++..|..|+++++|++|+|++|+++++.+.+|.++++|++|+|++|+++++.|..|+++++|++|+|++|.+++
T Consensus 56 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 135 (680)
T 1ziw_A 56 VGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 135 (680)
T ss_dssp CCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccc
Confidence 46788999999999999999999999999987666689999999999999999997777889999999999999999998
Q ss_pred CCCcccccccccceeeccccccCCCCCcccc--CCcccCcccccccccccccCccccCC---------------------
Q 039344 84 SIPPSLGNLSNLATLYLDTNSLSNSIPSELG--NLRSLSNLQLNNNILSGSIPHSLGNL--------------------- 140 (873)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l--------------------- 140 (873)
..|..|.++++|++|++++|.+++..+..+. .+++|++|++++|.+++..|..|..+
T Consensus 136 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~ 215 (680)
T 1ziw_A 136 TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKL 215 (680)
T ss_dssp CCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHH
T ss_pred cCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHH
Confidence 8888899999999999999998876666554 45778888888887776555544332
Q ss_pred ------CC--------------------------CcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCC
Q 039344 141 ------TN--------------------------LATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNL 188 (873)
Q Consensus 141 ------~~--------------------------L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 188 (873)
++ |++|++++|++.++.+..|..+++|++|+|++|++++..|..|.++
T Consensus 216 ~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 295 (680)
T 1ziw_A 216 CLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGL 295 (680)
T ss_dssp HHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTC
T ss_pred HHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCC
Confidence 22 5555555555555545555555555555555555555555555555
Q ss_pred CCCcEEeccCCCCcc-----cCC----ccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCC--CCCchhh
Q 039344 189 SNLATLYLDTNSLSY-----SIP----SELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLS--GAIPYEY 257 (873)
Q Consensus 189 ~~L~~L~L~~n~l~~-----~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~ 257 (873)
++|++|++++|...+ .+| ..|..+++|++|++++|++.+..+..|.++++|++|++++|.+. ......|
T Consensus 296 ~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f 375 (680)
T 1ziw_A 296 FNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETF 375 (680)
T ss_dssp TTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTT
T ss_pred CCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhh
Confidence 555555555543321 112 25677888999999999999888889999999999999999854 2333445
Q ss_pred cCC--CCCcEEEccCCcCcCc-CCcCCCCCCCCeEEccCccccc-ccccccccCCCccEEeccCccccccCCCCCCCCCC
Q 039344 258 RNL--VKLTILLLGHNQFRGP-IPILRNLTSLERVRLDRNYLTG-NISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPK 333 (873)
Q Consensus 258 ~~l--~~L~~L~L~~N~l~~~-~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 333 (873)
..+ ++|+.|++++|++.+. +..+..+++|+.|++++|.+++ +....|..+++|++|++++|++.+..+..|..+++
T Consensus 376 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 455 (680)
T 1ziw_A 376 VSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPS 455 (680)
T ss_dssp GGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTT
T ss_pred cccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcc
Confidence 444 6899999999999985 4578999999999999999986 45578999999999999999999999999999999
Q ss_pred CCeeeeccccCC--ccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCcc--------cccccc
Q 039344 334 LSTLDFSINNIT--GNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLS--------PKLGSL 403 (873)
Q Consensus 334 L~~L~l~~N~i~--~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l 403 (873)
|+.|++++|.+. +..|..++.+++|+.|+|++|.|++..+..+..+++|++|++++|++++..+ ..+..+
T Consensus 456 L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l 535 (680)
T 1ziw_A 456 LQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGL 535 (680)
T ss_dssp CCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTC
T ss_pred cccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCC
Confidence 999999999987 5678899999999999999999998888889999999999999999986422 237889
Q ss_pred cccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhh-ccCCCcE
Q 039344 404 VQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFE-KMNGLLH 482 (873)
Q Consensus 404 ~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~L~~ 482 (873)
++|+.|+|++|+|+...+..|.++. +|+.|||++|++++..+..|..+++|+.|+|++|+|++.+|..|. .+++|+.
T Consensus 536 ~~L~~L~L~~N~l~~i~~~~~~~l~--~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~ 613 (680)
T 1ziw_A 536 SHLHILNLESNGFDEIPVEVFKDLF--ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTE 613 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCT--TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSE
T ss_pred CCCCEEECCCCCCCCCCHHHccccc--CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCE
Confidence 9999999999999855455688876 999999999999998888889999999999999999999999888 8999999
Q ss_pred EecCCCcccccCCC
Q 039344 483 IDISYNELRGSIPN 496 (873)
Q Consensus 483 l~ls~N~l~~~~p~ 496 (873)
|++++|+|.+.-+.
T Consensus 614 l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 614 LDMRFNPFDCTCES 627 (680)
T ss_dssp EECTTCCCCBCCCC
T ss_pred EEccCCCcccCCcc
Confidence 99999999987654
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-55 Score=519.53 Aligned_cols=464 Identities=24% Similarity=0.245 Sum_probs=427.3
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG 83 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 83 (873)
+++|.|++..|..|.++++|++|+|++|+++++.|++|.++++|++|+|++|++++..|.+|+++++|++|++++|++++
T Consensus 40 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 119 (606)
T 3t6q_A 40 FSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISS 119 (606)
T ss_dssp CTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSC
T ss_pred ccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCccc
Confidence 57899999999999999999999999999999999999999999999999999998999999999999999999999998
Q ss_pred CCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCc--EEEccCCCCcccccccc
Q 039344 84 SIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLA--TLYIYSNSLSASILGKI 161 (873)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l~~~~~~~~ 161 (873)
..+..|.++++|++|++++|++++..+..+..+++|++|++++|.+++..+..|+.+++|+ +|++++|.+.++.+..|
T Consensus 120 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~ 199 (606)
T 3t6q_A 120 IDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAF 199 (606)
T ss_dssp GGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTT
T ss_pred CCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHh
Confidence 7788999999999999999999975555666699999999999999988888999999999 99999999998777665
Q ss_pred CCC---------------------------------------------------CCCCEEEccCCcCccCCCccccCCCC
Q 039344 162 GNL---------------------------------------------------KSLSNLQLSENNFNGSIPPSLGNLSN 190 (873)
Q Consensus 162 ~~l---------------------------------------------------~~L~~L~L~~n~i~~~~~~~~~~l~~ 190 (873)
... .+|+.|++++|.+++..+..|+.+++
T Consensus 200 ~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 279 (606)
T 3t6q_A 200 DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSG 279 (606)
T ss_dssp TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTT
T ss_pred hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccC
Confidence 431 16888999999999888888999999
Q ss_pred CcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCc-hhhcCCCCCcEEEcc
Q 039344 191 LATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIP-YEYRNLVKLTILLLG 269 (873)
Q Consensus 191 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~ 269 (873)
|++|++++|.++ .+|..+..+++|++|++++|++++..|..+..+++|++|++++|.+.+..+ ..+..+++|++|+++
T Consensus 280 L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 358 (606)
T 3t6q_A 280 LQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLS 358 (606)
T ss_dssp CSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECC
T ss_pred CCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECC
Confidence 999999999999 788889999999999999999998888899999999999999999985554 459999999999999
Q ss_pred CCcCcCc---CCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCC-CCCCCCCCCeeeeccccCC
Q 039344 270 HNQFRGP---IPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISS-DWGRCPKLSTLDFSINNIT 345 (873)
Q Consensus 270 ~N~l~~~---~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~i~ 345 (873)
+|++.+. ...+..+++|++|++++|.++++.+..|..+++|++|++++|.+.+..+. .+..+++|+.|++++|.++
T Consensus 359 ~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 438 (606)
T 3t6q_A 359 HDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD 438 (606)
T ss_dssp SSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCB
T ss_pred CCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccC
Confidence 9999875 45789999999999999999999999999999999999999999877654 4899999999999999999
Q ss_pred ccCCccccCCCCCCEEeccCCccCCC---CCccccccccccEEEecCccccCCcccccccccccccccccccccccccCC
Q 039344 346 GNVPPEIGHSSQLGVLDLSSNHIVGE---IPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPK 422 (873)
Q Consensus 346 ~~~~~~~~~~~~L~~L~Ls~N~i~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 422 (873)
+..|..++.+++|++|+|++|.+++. .+..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..|.
T Consensus 439 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 518 (606)
T 3t6q_A 439 ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE 518 (606)
T ss_dssp TTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGG
T ss_pred CcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChh
Confidence 88899999999999999999999862 346789999999999999999998899999999999999999999999999
Q ss_pred CcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCc
Q 039344 423 SLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIP 471 (873)
Q Consensus 423 ~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 471 (873)
.+..+. .| .|+|++|++++.+|..+..+++|+.|++++|++++..+
T Consensus 519 ~l~~l~--~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 519 ALSHLK--GI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp GGTTCC--SC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred HhCccc--cc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 999877 88 99999999999999999999999999999999997655
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-55 Score=535.10 Aligned_cols=491 Identities=22% Similarity=0.244 Sum_probs=366.9
Q ss_pred CCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCccccc-CCCCccCCCCCCEEEcccCCCCCC
Q 039344 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGS-IPGEIGNFRFFSDLELSNNKLSGS 84 (873)
Q Consensus 6 ~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~ 84 (873)
.++++.. |. + .++|++|||++|.|+++.|..|.++++|++|+|++|...+. .|++|+++++|++|+|++|.+++.
T Consensus 13 ~~~L~~v-P~-l--p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~ 88 (844)
T 3j0a_A 13 FCNLTQV-PQ-V--LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL 88 (844)
T ss_dssp CCCSSCC-CS-S--CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE
T ss_pred CCCCCCC-CC-C--CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc
Confidence 4455554 43 3 36788888888888888888888888888888888854434 478888888888888888888877
Q ss_pred CCcccccccccceeeccccccCCCCCcc--ccCCcccCcccccccccccccC-ccccCCCCCcEEEccCCCCcccccccc
Q 039344 85 IPPSLGNLSNLATLYLDTNSLSNSIPSE--LGNLRSLSNLQLNNNILSGSIP-HSLGNLTNLATLYIYSNSLSASILGKI 161 (873)
Q Consensus 85 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~ 161 (873)
.|.+|.++++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+
T Consensus 89 ~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 89 HPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp CTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred CHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 7888888888888888888888755554 8888888888888888876544 568888888888888888887777777
Q ss_pred CCC--CCCCEEEccCCcCccCCCccccCCCC------CcEEeccCCCCcccCCccccC----------------------
Q 039344 162 GNL--KSLSNLQLSENNFNGSIPPSLGNLSN------LATLYLDTNSLSYSIPSELGN---------------------- 211 (873)
Q Consensus 162 ~~l--~~L~~L~L~~n~i~~~~~~~~~~l~~------L~~L~L~~n~l~~~~~~~~~~---------------------- 211 (873)
..+ ++|+.|+++.|.+.+..+..+..+++ |+.|++++|.+++..+..+..
T Consensus 169 ~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~ 248 (844)
T 3j0a_A 169 EPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFG 248 (844)
T ss_dssp HHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSS
T ss_pred ccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccc
Confidence 776 78888888888888777776666555 888888888776544433321
Q ss_pred ----------------CCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcC
Q 039344 212 ----------------LRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG 275 (873)
Q Consensus 212 ----------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 275 (873)
.++|+.|++++|.+.+..+..|..+++|+.|+|++|++++..+..|..+++|++|++++|++.+
T Consensus 249 ~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 328 (844)
T 3j0a_A 249 FHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGE 328 (844)
T ss_dssp CSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSC
T ss_pred ccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCc
Confidence 2578888888888887777788888888888888888888888888888888888888888877
Q ss_pred c-CCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccC
Q 039344 276 P-IPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGH 354 (873)
Q Consensus 276 ~-~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~ 354 (873)
. +..+..+++|+.|++++|.++.+.+..|..+++|++|+|++|.+++. ..+++|+.|++++|+++ .+|..
T Consensus 329 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~--- 399 (844)
T 3j0a_A 329 LYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI--- 399 (844)
T ss_dssp CCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---
T ss_pred cCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---
Confidence 4 44788888888888888888888888888888888888888888642 23677888888888877 34432
Q ss_pred CCCCCEEeccCCccCCCCC-ccccccccccEEEecCccccCCccc-ccccccccccccccccccc-----cccCCCcCch
Q 039344 355 SSQLGVLDLSSNHIVGEIP-IELGKLNFFIKLVLAHNQLSGQLSP-KLGSLVQLEHLDLSSNRLS-----NSIPKSLGNL 427 (873)
Q Consensus 355 ~~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l 427 (873)
..+++.|++++|++++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++
T Consensus 400 ~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l 479 (844)
T 3j0a_A 400 NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGL 479 (844)
T ss_dssp CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCB
T ss_pred ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCc
Confidence 3567777777777764321 2344677777788888877754332 3455677777777777776 3334556655
Q ss_pred hhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCCCCcccCCCccc
Q 039344 428 ELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFKDAPIEA 507 (873)
Q Consensus 428 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~ 507 (873)
. +|+.|+|++|.+++.+|..+..+++|+.|+|++|+|++++|..+. ++|+.|||++|++++.+|+. |+......
T Consensus 480 ~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~ 553 (844)
T 3j0a_A 480 S--HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLD 553 (844)
T ss_dssp C--CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEE
T ss_pred c--cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEE
Confidence 4 777777777777777777777777777788887777777666655 67777777777777776653 44555555
Q ss_pred ccCCCCcc
Q 039344 508 LQGNKGLY 515 (873)
Q Consensus 508 ~~~n~~l~ 515 (873)
+.+|+-.|
T Consensus 554 l~~Np~~C 561 (844)
T 3j0a_A 554 ITHNKFIC 561 (844)
T ss_dssp EEEECCCC
T ss_pred ecCCCccc
Confidence 66666555
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-55 Score=521.48 Aligned_cols=476 Identities=21% Similarity=0.208 Sum_probs=339.0
Q ss_pred CCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCC
Q 039344 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSI 85 (873)
Q Consensus 6 ~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 85 (873)
+++++. +|..+. +++++|+|++|++++..+.+|.++++|++|+|++|+++++.|.+|+++++|++|+|++|.+++..
T Consensus 20 ~~~l~~-ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~ 96 (606)
T 3vq2_A 20 DQKLSK-VPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS 96 (606)
T ss_dssp TSCCSS-CCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCC
T ss_pred CCCccc-CCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccC
Confidence 445544 555565 68899999999998888888999999999999999998888888899999999999999998877
Q ss_pred CcccccccccceeeccccccCCCCCccccCCcccCccccccccccc-ccCccccCCCCCcEEEccCCCCccccccccCCC
Q 039344 86 PPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSG-SIPHSLGNLTNLATLYIYSNSLSASILGKIGNL 164 (873)
Q Consensus 86 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 164 (873)
|.+|.++++|++|+|++|++++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|+++++.+..|+.+
T Consensus 97 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 176 (606)
T 3vq2_A 97 PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFL 176 (606)
T ss_dssp TTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHH
T ss_pred hhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhh
Confidence 8889999999999999999987777888889999999999999875 468889999999999999999888877777766
Q ss_pred CCCC----EEEccCCcCccCCCccccCCCCCcEEeccCCCCcc-cCCcc-------------------------------
Q 039344 165 KSLS----NLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSY-SIPSE------------------------------- 208 (873)
Q Consensus 165 ~~L~----~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~------------------------------- 208 (873)
++|+ +|++++|.+++..+..+... +|+.|++++|.+++ ..|..
T Consensus 177 ~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~ 255 (606)
T 3vq2_A 177 RENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIM 255 (606)
T ss_dssp HHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGG
T ss_pred hccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHh
Confidence 6554 78999998886666666554 78888888887641 12222
Q ss_pred -------------------------ccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCC
Q 039344 209 -------------------------LGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKL 263 (873)
Q Consensus 209 -------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 263 (873)
+..+++|+.|++++|.+.. .| .+..+++|++|++++|.+. ..| .+ .+++|
T Consensus 256 ~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L 330 (606)
T 3vq2_A 256 EGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLK-QFP-TL-DLPFL 330 (606)
T ss_dssp TTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCS-SCC-CC-CCSSC
T ss_pred hhhhhccHhheeccccccccccccccccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCc-ccc-cC-CCCcc
Confidence 4455666666666666653 33 5666666666666666663 444 33 66666
Q ss_pred cEEEccCCcCcCcCCcCCCCCCCCeEEccCccccccc--ccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeecc
Q 039344 264 TILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNI--SESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSI 341 (873)
Q Consensus 264 ~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 341 (873)
+.|++++|+..+.. .+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+ .+..+..+++|+.|++++
T Consensus 331 ~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~ 408 (606)
T 3vq2_A 331 KSLTLTMNKGSISF-KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQH 408 (606)
T ss_dssp CEEEEESCSSCEEC-CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTT
T ss_pred ceeeccCCcCccch-hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCC
Confidence 66666666544332 4556666777777777666553 4556666677777777776664 346666667777777777
Q ss_pred ccCCccCC-ccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccC-Ccccccccccccccccccccccccc
Q 039344 342 NNITGNVP-PEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSG-QLSPKLGSLVQLEHLDLSSNRLSNS 419 (873)
Q Consensus 342 N~i~~~~~-~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~ 419 (873)
|++.+..| ..+..+++|++|++++|.+++..|..+..+++|++|++++|++++ .+|..+..+++|+.|+|++|++++.
T Consensus 409 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 488 (606)
T 3vq2_A 409 STLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQI 488 (606)
T ss_dssp SEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred CccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCcc
Confidence 76665555 456666677777777777666666666666777777777776665 3566666667777777777777666
Q ss_pred cCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhhccC-CCcEEecCCCcccccCC
Q 039344 420 IPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMN-GLLHIDISYNELRGSIP 495 (873)
Q Consensus 420 ~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~L~~l~ls~N~l~~~~p 495 (873)
.|..++.+. +|++|+|++|++++..|..+..+++|+.|+|++|+|+. +|..+..++ +|++|++++|++.+..+
T Consensus 489 ~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 489 SWGVFDTLH--RLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CTTTTTTCT--TCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred Chhhhcccc--cCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 666666654 66777777777766666666667777777777777663 444466665 47777777777665444
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.7e-55 Score=516.26 Aligned_cols=479 Identities=21% Similarity=0.232 Sum_probs=420.7
Q ss_pred CCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccc
Q 039344 23 LSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDT 102 (873)
Q Consensus 23 l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 102 (873)
.+.++.++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|.+|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 89 (606)
T 3vq2_A 13 NITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTG 89 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCC
Confidence 468999999998 6777665 8999999999999988888999999999999999999988899999999999999999
Q ss_pred cccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccc-cccccCCCCCCCEEEccCCcCccCC
Q 039344 103 NSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSAS-ILGKIGNLKSLSNLQLSENNFNGSI 181 (873)
Q Consensus 103 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~ 181 (873)
|++++..|..|.++++|++|++++|.+++..+..|+.+++|++|++++|++.+. .+..|+++++|++|++++|++++..
T Consensus 90 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 90 NPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred CcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 999988899999999999999999999977778899999999999999999864 4788999999999999999999888
Q ss_pred CccccCCCCCc----EEeccCCCCcccCCccccCCCCCCEEEccCcccC-------------------------------
Q 039344 182 PPSLGNLSNLA----TLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLS------------------------------- 226 (873)
Q Consensus 182 ~~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------------- 226 (873)
+..++.+++|+ +|++++|.+++..+..+... +|++|++++|.+.
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~ 248 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc
Confidence 88888776655 89999999997666666655 8999999998764
Q ss_pred ---------------------------CCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCc
Q 039344 227 ---------------------------GSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPI 279 (873)
Q Consensus 227 ---------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 279 (873)
+..|. +..+++|+.|++++|.+.. .| .+..+++|+.|++++|++.. .+.
T Consensus 249 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~~-lp~ 324 (606)
T 3vq2_A 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLKQ-FPT 324 (606)
T ss_dssp CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCSS-CCC
T ss_pred ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCcc-ccc
Confidence 11222 5677899999999999975 44 78889999999999999944 445
Q ss_pred CCCCCCCCeEEccCcccccccccccccCCCccEEeccCcccccc--CCCCCCCCCCCCeeeeccccCCccCCccccCCCC
Q 039344 280 LRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGE--ISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQ 357 (873)
Q Consensus 280 l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~ 357 (873)
+ .+++|++|++++|...+.. .+..+++|++|++++|.+++. .+..+..+++|+.|++++|.+++ +|..+..+++
T Consensus 325 ~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~ 400 (606)
T 3vq2_A 325 L-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEE 400 (606)
T ss_dssp C-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTT
T ss_pred C-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCC
Confidence 6 8999999999999544332 677899999999999999876 37888899999999999999985 6688999999
Q ss_pred CCEEeccCCccCCCCC-ccccccccccEEEecCccccCCccccccccccccccccccccccc-ccCCCcCchhhhhhhcc
Q 039344 358 LGVLDLSSNHIVGEIP-IELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSN-SIPKSLGNLELIHLSEL 435 (873)
Q Consensus 358 L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~~~L~~L 435 (873)
|+.|++++|.+.+..| ..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++.+ .+|..++.+. +|+.|
T Consensus 401 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~--~L~~L 478 (606)
T 3vq2_A 401 LQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTT--NLTFL 478 (606)
T ss_dssp CCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT--TCCEE
T ss_pred CCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCC--CCCEE
Confidence 9999999999998777 688999999999999999999899999999999999999999997 4799998876 99999
Q ss_pred cccCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCCC-Cccc-CCCcccccCCCC
Q 039344 436 DLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNS-TTFK-DAPIEALQGNKG 513 (873)
Q Consensus 436 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~-~~~~-~~~~~~~~~n~~ 513 (873)
+|++|++++..|..+..+++|+.|+|++|++++.+|..|..+++|++|||++|+++ .+|.. ..++ ......+.+|+-
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCC
T ss_pred ECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999 56654 2222 244556778765
Q ss_pred ccc
Q 039344 514 LYG 516 (873)
Q Consensus 514 l~g 516 (873)
.|.
T Consensus 558 ~c~ 560 (606)
T 3vq2_A 558 ACI 560 (606)
T ss_dssp CCS
T ss_pred ccC
Confidence 554
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-54 Score=528.21 Aligned_cols=477 Identities=23% Similarity=0.217 Sum_probs=421.1
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCccc-ccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLS-GSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLS 82 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 82 (873)
+++|.|++..|.+|+++++|++|+|++|... .+.|++|.++++|++|+|++|.+++..|++|+++++|++|+|++|.++
T Consensus 31 Ls~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 110 (844)
T 3j0a_A 31 LSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLS 110 (844)
T ss_dssp EESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCS
T ss_pred CCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCC
Confidence 5789999999999999999999999999655 444899999999999999999999999999999999999999999999
Q ss_pred CCCCcc--cccccccceeeccccccCCCCC-ccccCCcccCcccccccccccccCccccCC--CCCcEEEccCCCCcccc
Q 039344 83 GSIPPS--LGNLSNLATLYLDTNSLSNSIP-SELGNLRSLSNLQLNNNILSGSIPHSLGNL--TNLATLYIYSNSLSASI 157 (873)
Q Consensus 83 ~~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~ 157 (873)
+..|.. |.++++|++|+|++|.+++..+ ..|.++++|++|+|++|.+++..+..|..+ ++|+.|++++|.+.+..
T Consensus 111 ~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~ 190 (844)
T 3j0a_A 111 DAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRV 190 (844)
T ss_dssp SCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCC
T ss_pred cccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCcccccc
Confidence 766654 9999999999999999997654 679999999999999999998889999888 89999999999998877
Q ss_pred ccccCCCCC------CCEEEccCCcCccCCCcccc------------------------------------C--CCCCcE
Q 039344 158 LGKIGNLKS------LSNLQLSENNFNGSIPPSLG------------------------------------N--LSNLAT 193 (873)
Q Consensus 158 ~~~~~~l~~------L~~L~L~~n~i~~~~~~~~~------------------------------------~--l~~L~~ 193 (873)
+..+..+.+ |++|++++|.+++..+..+. + .++|+.
T Consensus 191 ~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~ 270 (844)
T 3j0a_A 191 SVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRH 270 (844)
T ss_dssp CCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCE
T ss_pred ccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccE
Confidence 777766665 99999999988765554332 1 268999
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcC
Q 039344 194 LYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQF 273 (873)
Q Consensus 194 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 273 (873)
|++++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++++|++
T Consensus 271 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i 350 (844)
T 3j0a_A 271 LDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHI 350 (844)
T ss_dssp EECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCC
T ss_pred EECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCC
Confidence 99999999988899999999999999999999988889999999999999999999999899999999999999999999
Q ss_pred cCcCC-cCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCC-cc
Q 039344 274 RGPIP-ILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVP-PE 351 (873)
Q Consensus 274 ~~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~-~~ 351 (873)
....+ .+..+++|+.|+|++|.++++.. +++|+.|++++|+++ .+|.. ..+++.|++++|++++... ..
T Consensus 351 ~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~-----~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~ 421 (844)
T 3j0a_A 351 AIIQDQTFKFLEKLQTLDLRDNALTTIHF-----IPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYF 421 (844)
T ss_dssp CCCCSSCSCSCCCCCEEEEETCCSCCCSS-----CCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHH
T ss_pred CccChhhhcCCCCCCEEECCCCCCCcccC-----CCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhh
Confidence 88554 68999999999999999986543 789999999999998 44443 4689999999999986432 23
Q ss_pred ccCCCCCCEEeccCCccCCCCCc-cccccccccEEEecCcccc-----CCcccccccccccccccccccccccccCCCcC
Q 039344 352 IGHSSQLGVLDLSSNHIVGEIPI-ELGKLNFFIKLVLAHNQLS-----GQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLG 425 (873)
Q Consensus 352 ~~~~~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 425 (873)
+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 56899999999999999865443 4567899999999999997 34456788999999999999999999999898
Q ss_pred chhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCC
Q 039344 426 NLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPN 496 (873)
Q Consensus 426 ~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~ 496 (873)
++. +|+.|+|++|+|++..+..+. ++|+.|+|++|+|++.+|..| .+|+.+++++|++.+..+-
T Consensus 502 ~l~--~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 502 HLT--ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCC--SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSC
T ss_pred chh--hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCccccccc
Confidence 877 999999999999998877776 899999999999999999875 4899999999999986653
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-52 Score=488.69 Aligned_cols=476 Identities=24% Similarity=0.270 Sum_probs=416.4
Q ss_pred cCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCccccc
Q 039344 12 SIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGN 91 (873)
Q Consensus 12 ~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 91 (873)
.+|..+. +.++.|+|++|+++++.+.+|.++++|++|+|++|+++++.|++|+++++|++|+|++|++++..|.+|.+
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 4666665 57999999999999888999999999999999999999888899999999999999999999888899999
Q ss_pred ccccceeeccccccCCCCCccccCCcccCccccccccccc-ccCccccCCCCCcEEEccCCCCccccccccCCCCCC---
Q 039344 92 LSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSG-SIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSL--- 167 (873)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--- 167 (873)
+++|++|++++|+++...+..|.++++|++|++++|.+++ .+|..|+++++|++|++++|+++.+.+..++.+++|
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~ 178 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchh
Confidence 9999999999999997666679999999999999999986 368999999999999999999999888888888888
Q ss_pred -CEEEccCCcCccCCCccccCCCCCcEEeccCCCCcc-cCCccccCCCC-------------------------------
Q 039344 168 -SNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSY-SIPSELGNLRS------------------------------- 214 (873)
Q Consensus 168 -~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~------------------------------- 214 (873)
+.|++++|.+++..+..+..+ +|+.|++++|.... ..+..+..++.
T Consensus 179 ~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l 257 (570)
T 2z63_A 179 NLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257 (570)
T ss_dssp CCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGS
T ss_pred hhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccccc
Confidence 899999999998888888766 89999999884331 11222222222
Q ss_pred -CCEEEccCc-ccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEcc
Q 039344 215 -LSNLSLGYN-KLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLD 292 (873)
Q Consensus 215 -L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~ 292 (873)
++.+++++| .+.+..+..+..+++|++|++++|.++ ..|..+..+ +|+.|++++|.+...+. ..+++|+.|+++
T Consensus 258 ~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~--~~l~~L~~L~l~ 333 (570)
T 2z63_A 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT--LKLKSLKRLTFT 333 (570)
T ss_dssp EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB--CBCSSCCEEEEE
T ss_pred chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc--ccccccCEEeCc
Confidence 455666666 666677888899999999999999998 467778888 99999999999985433 578899999999
Q ss_pred CcccccccccccccCCCccEEeccCccccccC--CCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCC
Q 039344 293 RNYLTGNISESFYIYPNLTYIDLSQNNFYGEI--SSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVG 370 (873)
Q Consensus 293 ~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~ 370 (873)
+|.+.+..+. ..+++|++|++++|.+++.. +..+..+++|+.|++++|.+++..+ .+..+++|++|++++|.+.+
T Consensus 334 ~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~ 410 (570)
T 2z63_A 334 SNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQ 410 (570)
T ss_dssp SCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEES
T ss_pred CCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCcccc
Confidence 9998865544 67899999999999998654 6778889999999999999986544 49999999999999999987
Q ss_pred CCC-ccccccccccEEEecCccccCCcccccccccccccccccccccc-cccCCCcCchhhhhhhcccccCCccCcccch
Q 039344 371 EIP-IELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLS-NSIPKSLGNLELIHLSELDLSRNFLREAIPS 448 (873)
Q Consensus 371 ~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~ 448 (873)
..| ..+..+++|++|++++|.+++..+..+..+++|+.|+|++|++. +.+|..+..+. +|++|+|++|++++..|.
T Consensus 411 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~--~L~~L~l~~n~l~~~~~~ 488 (570)
T 2z63_A 411 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR--NLTFLDLSQCQLEQLSPT 488 (570)
T ss_dssp CTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT--TCCEEECTTSCCCEECTT
T ss_pred ccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhccc--CCCEEECCCCccccCChh
Confidence 666 57889999999999999999989999999999999999999997 67999998876 999999999999999899
Q ss_pred hhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCCCCc
Q 039344 449 QICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTT 499 (873)
Q Consensus 449 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~~~ 499 (873)
.+..+++|+.|++++|++++.+|..|..+++|++|++++|++++..|....
T Consensus 489 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 539 (570)
T 2z63_A 489 AFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539 (570)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred hhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHH
Confidence 999999999999999999999999999999999999999999999887543
No 12
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.9e-52 Score=442.63 Aligned_cols=255 Identities=21% Similarity=0.356 Sum_probs=209.7
Q ss_pred cCCCCCceeeecCCeEEEEEEeC------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
.++++.+.||+|+||+||+|++. +++.||||+++..... ...++|.+|+.++++++|||||+++|+|.+.+.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--HHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 44666789999999999999863 5688999999765332 335789999999999999999999999999999
Q ss_pred eEEEEEeccCCChhhHhcccc-------------cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC
Q 039344 676 LFIVYEYFKMCSLAVILSNDA-------------AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~ 742 (873)
.++|||||++|+|.+++.... ....++|.++.+++.|||+||+|||++ +|+||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECC
Confidence 999999999999999996532 234589999999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhh
Q 039344 743 ENEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLN 819 (873)
Q Consensus 743 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~ 819 (873)
++.+||+|||+|+....... ......||+.|||||++.++.|+.++|||||||++|||+| |+.||.......
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~----- 255 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD----- 255 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH-----
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 99999999999987644322 2345679999999999999999999999999999999998 899987544322
Q ss_pred hhhhhhhhcCCC-CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhcC
Q 039344 820 LNIALDEMLDPR-LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLKI 873 (873)
Q Consensus 820 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 873 (873)
....+..+. .+.+. .+ +..+.+++.+||+.||++||||+||++.|+.
T Consensus 256 ---~~~~i~~~~~~~~p~-~~---~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 256 ---VVEMIRNRQVLPCPD-DC---PAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp ---HHHHHHTTCCCCCCT-TC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---HHHHHHcCCCCCCcc-cc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 122222222 22222 22 2348899999999999999999999999863
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.8e-52 Score=440.87 Aligned_cols=254 Identities=23% Similarity=0.430 Sum_probs=208.1
Q ss_pred cCCCCCceeeecCCeEEEEEEeC------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
++|.+.+.||+|+||+||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 56888899999999999999753 4788999999753 23346789999999999999999999999999999
Q ss_pred eEEEEEeccCCChhhHhcccc----------cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC
Q 039344 676 LFIVYEYFKMCSLAVILSNDA----------AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE 745 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~ 745 (873)
.|+|||||++|+|.++++... ....++|.++..++.||++||+|||++ +|+||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 999999999999999997542 234699999999999999999999999 9999999999999999999
Q ss_pred eEEeccccccccCCCCCCc--cccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhh
Q 039344 746 AHVSDFGIAKFLKPDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNI 822 (873)
Q Consensus 746 ~kl~Dfg~a~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~ 822 (873)
+||+|||+|+......... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.......
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~-------- 238 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------- 238 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 9999999998765433321 23468999999999999999999999999999999999 999987544322
Q ss_pred hhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+..+..+..+... +..+.+++.+||+.||++|||++||.+.|+
T Consensus 239 ~~~~i~~~~~~~~p~~~---~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 239 VIECITQGRVLQRPRTC---PQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccc---hHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 12222222222112222 234889999999999999999999998874
No 14
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.6e-52 Score=441.83 Aligned_cols=253 Identities=24% Similarity=0.420 Sum_probs=202.5
Q ss_pred cCCCCCceeeecCCeEEEEEEeC------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
++|.+.++||+|+||+||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+.+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 56777889999999999999864 5789999999753 33446789999999999999999999999999999
Q ss_pred eEEEEEeccCCChhhHhcccc------------cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC
Q 039344 676 LFIVYEYFKMCSLAVILSNDA------------AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE 743 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~ 743 (873)
.|+|||||++|+|.++++... ...+++|.++..|+.||+.||+|||++ +|+||||||+|||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 999999999999999997543 224689999999999999999999999 99999999999999999
Q ss_pred CCeEEeccccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhh
Q 039344 744 NEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNL 820 (873)
Q Consensus 744 ~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~ 820 (873)
+.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||.........
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~---- 270 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI---- 270 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH----
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH----
Confidence 9999999999987654332 2235679999999999999999999999999999999999 99998754432211
Q ss_pred hhhhhhhcCC-CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 821 NIALDEMLDP-RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 821 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+..+ +++.+.. + ...+.+++.+||+.||++||||+||++.|+
T Consensus 271 ----~~i~~g~~~~~p~~-~---~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 271 ----DCITQGRELERPRA-C---PPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp ----HHHHHTCCCCCCTT-C---CHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred ----HHHHcCCCCCCccc-c---cHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 111111 2222221 2 234889999999999999999999999885
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-51 Score=432.58 Aligned_cols=257 Identities=24% Similarity=0.358 Sum_probs=202.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.+++.+.++||+|+||+||+|++. ..||||+++.... .....+.|.+|++++++++|||||+++|+|.+ +..++||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 467888899999999999999876 3599999875433 23346789999999999999999999999864 5689999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
|||++|+|.++++... ..+++.++..|+.|||.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999996543 4599999999999999999999999 9999999999999999999999999999876543
Q ss_pred C--CCcccccccccccccccccc---CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCC
Q 039344 761 S--SNWTELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835 (873)
Q Consensus 761 ~--~~~~~~~g~~~y~aPE~~~~---~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (873)
. .......||+.|||||++.+ ++|+.++|||||||++|||+||+.||............ .......+..+..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~---~~~~~~~p~~~~~ 262 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGRGYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHTTCCCCCSTTS
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH---HhcCCCCCCcccc
Confidence 2 23345789999999999864 45899999999999999999999999754432211111 1111222322222
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
... ....+.+++.+||+.||++||||+||++.|+
T Consensus 263 ~~~---~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 263 YKN---CPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CTT---SCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred ccc---chHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 222 2335889999999999999999999998875
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-50 Score=472.47 Aligned_cols=459 Identities=22% Similarity=0.216 Sum_probs=408.5
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG 83 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 83 (873)
+++|++++..|.+|.++++|++|+|++|+++++.|++|.++++|++|+|++|++++..|++|.++++|++|++++|+++.
T Consensus 35 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 114 (570)
T 2z63_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 114 (570)
T ss_dssp CCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCC
T ss_pred ccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccccccc
Confidence 57899999999999999999999999999998889999999999999999999998888999999999999999999997
Q ss_pred CCCcccccccccceeeccccccCC-CCCccccCCcccCcccccccccccccCccccCCCCC----cEEEccCCCCccccc
Q 039344 84 SIPPSLGNLSNLATLYLDTNSLSN-SIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNL----ATLYIYSNSLSASIL 158 (873)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~n~l~~~~~ 158 (873)
..+..|+++++|++|++++|.+++ .+|..|.++++|++|++++|.+++..+..|+.+++| +.|++++|.+..+.+
T Consensus 115 l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~ 194 (570)
T 2z63_A 115 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 194 (570)
T ss_dssp STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECT
T ss_pred CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCH
Confidence 777789999999999999999986 369999999999999999999998888889999999 899999999999888
Q ss_pred cccCCCCCCCEEEccCCcCcc-------------------------------CCCccccCCC--CCcEEeccCC-CCccc
Q 039344 159 GKIGNLKSLSNLQLSENNFNG-------------------------------SIPPSLGNLS--NLATLYLDTN-SLSYS 204 (873)
Q Consensus 159 ~~~~~l~~L~~L~L~~n~i~~-------------------------------~~~~~~~~l~--~L~~L~L~~n-~l~~~ 204 (873)
..|..+ +|++|++++|.... .....+..+. .++.++++++ .+.+.
T Consensus 195 ~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~ 273 (570)
T 2z63_A 195 GAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDD 273 (570)
T ss_dssp TTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESC
T ss_pred HHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhh
Confidence 888776 89999999884321 1112222222 2456667666 66667
Q ss_pred CCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCC
Q 039344 205 IPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLT 284 (873)
Q Consensus 205 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~ 284 (873)
.+..+..+++|++|++++|.++ ..|..+..+ +|++|++++|.+.. .|. ..+++|+.|++++|.+.+..+. ..++
T Consensus 274 ~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~-l~~--~~l~~L~~L~l~~n~~~~~~~~-~~~~ 347 (570)
T 2z63_A 274 IIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQ-FPT--LKLKSLKRLTFTSNKGGNAFSE-VDLP 347 (570)
T ss_dssp STTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSS-CCB--CBCSSCCEEEEESCBSCCBCCC-CBCT
T ss_pred chhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccc-cCc--ccccccCEEeCcCCcccccccc-ccCC
Confidence 8888999999999999999998 577788888 99999999999984 443 5789999999999998876555 7889
Q ss_pred CCCeEEccCccccccc--ccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCC-ccccCCCCCCEE
Q 039344 285 SLERVRLDRNYLTGNI--SESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVP-PEIGHSSQLGVL 361 (873)
Q Consensus 285 ~L~~L~L~~n~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~-~~~~~~~~L~~L 361 (873)
+|++|++++|.+++.. +..+..+++|++|++++|.+.+..+. +..+++|+.|++++|.+++..+ ..+..+++|++|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 9999999999999765 56788999999999999999876555 8999999999999999987666 578899999999
Q ss_pred eccCCccCCCCCccccccccccEEEecCcccc-CCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCC
Q 039344 362 DLSSNHIVGEIPIELGKLNFFIKLVLAHNQLS-GQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRN 440 (873)
Q Consensus 362 ~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N 440 (873)
++++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+. +|++|+|++|
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n 504 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS--SLQVLNMASN 504 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT--TCCEEECCSS
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhccc--CCCEEeCCCC
Confidence 99999999889999999999999999999998 57889999999999999999999988899999876 9999999999
Q ss_pred ccCcccchhhhhhcccceecccCccccCCCch
Q 039344 441 FLREAIPSQICIMQSLEKLNLSHNSLSGLIPS 472 (873)
Q Consensus 441 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 472 (873)
++++.++..+..+++|+.|++++|++++..|.
T Consensus 505 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 505 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999999999999999988774
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.7e-51 Score=473.54 Aligned_cols=477 Identities=22% Similarity=0.211 Sum_probs=403.7
Q ss_pred cCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCC
Q 039344 5 YNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGS 84 (873)
Q Consensus 5 ~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 84 (873)
++|.++ .+|..+. +.|++|+|++|++++..|.+|.++++|++|+|++|++++..|++|.++++|++|+|++|++++.
T Consensus 13 ~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 89 (549)
T 2z81_A 13 RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSL 89 (549)
T ss_dssp TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSC
T ss_pred CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCcc
Confidence 456666 4566665 7899999999999988899999999999999999999988889999999999999999999988
Q ss_pred CCcccccccccceeeccccccCCC-CCccccCCcccCcccccccc-cccccCccccCCCCCcEEEccCCCCccccccccC
Q 039344 85 IPPSLGNLSNLATLYLDTNSLSNS-IPSELGNLRSLSNLQLNNNI-LSGSIPHSLGNLTNLATLYIYSNSLSASILGKIG 162 (873)
Q Consensus 85 ~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (873)
.|.+|+++++|++|++++|++++. .|..|.++++|++|++++|. ++...+..|.++++|++|++++|.+++..+..+.
T Consensus 90 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 90 SSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp CHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred CHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhh
Confidence 788899999999999999999863 57789999999999999998 4534446899999999999999999998899999
Q ss_pred CCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccC--C-ccccCCCCCCEEEccCcccCCCcc----cccCC
Q 039344 163 NLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSI--P-SELGNLRSLSNLSLGYNKLSGSIP----ISMGN 235 (873)
Q Consensus 163 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~ 235 (873)
.+++|++|+++.|.+.......+..+++|++|++++|.+++.. + .....+++|+.|++++|++++..+ ..+..
T Consensus 170 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 170 SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 9999999999999987443333467899999999999998642 2 234567899999999999875433 34467
Q ss_pred CCCccEEecccccCCCCC------chhhcCCCCCcEEEccCCcCcCcCC------cCCCCCCCCeEEccCcccccccccc
Q 039344 236 LSNLTYLNLFENSLSGAI------PYEYRNLVKLTILLLGHNQFRGPIP------ILRNLTSLERVRLDRNYLTGNISES 303 (873)
Q Consensus 236 l~~L~~L~L~~n~l~~~~------~~~~~~l~~L~~L~L~~N~l~~~~~------~l~~l~~L~~L~L~~n~l~~~~~~~ 303 (873)
+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+..... .+...++|+.|++++|.++.++...
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~ 329 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSF 329 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHH
T ss_pred hccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHH
Confidence 789999999999887542 2345678899999999998765211 1234578999999999999877776
Q ss_pred cccCCCccEEeccCccccccC---CCCCCCCCCCCeeeeccccCCccCC--ccccCCCCCCEEeccCCccCCCCCccccc
Q 039344 304 FYIYPNLTYIDLSQNNFYGEI---SSDWGRCPKLSTLDFSINNITGNVP--PEIGHSSQLGVLDLSSNHIVGEIPIELGK 378 (873)
Q Consensus 304 ~~~~~~L~~L~Ls~N~l~~~~---~~~~~~l~~L~~L~l~~N~i~~~~~--~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~ 378 (873)
+..+++|++|++++|++.+.. +..+..+++|+.|++++|++++..+ ..++.+++|++|+|++|+++ .+|..+..
T Consensus 330 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 408 (549)
T 2z81_A 330 SQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW 408 (549)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCC
T ss_pred HhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcc
Confidence 778999999999999998765 3457889999999999999986432 45889999999999999998 68889999
Q ss_pred cccccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccce
Q 039344 379 LNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEK 458 (873)
Q Consensus 379 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 458 (873)
+++|++|++++|+++. ++..+ .++|+.|||++|+|++.. ..+. +|++|+|++|+|+. +|. ...+++|+.
T Consensus 409 ~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~--~L~~L~Ls~N~l~~-ip~-~~~l~~L~~ 477 (549)
T 2z81_A 409 PEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLP--RLQELYISRNKLKT-LPD-ASLFPVLLV 477 (549)
T ss_dssp CTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCT--TCCEEECCSSCCSS-CCC-GGGCTTCCE
T ss_pred cccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCC--hhcEEECCCCccCc-CCC-cccCccCCE
Confidence 9999999999999985 34333 268999999999998643 3333 89999999999995 555 467899999
Q ss_pred ecccCccccCCCchhhhccCCCcEEecCCCcccccCCC
Q 039344 459 LNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPN 496 (873)
Q Consensus 459 L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~ 496 (873)
|+|++|++++.+|..|..+++|+.|++++|++.+..|.
T Consensus 478 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 478 MKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp EECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred EecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99999999999999999999999999999999988774
No 18
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.6e-51 Score=432.98 Aligned_cols=249 Identities=24% Similarity=0.411 Sum_probs=210.1
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
..|++.+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|+++++.++|||||++++++.+.+..|+||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56889999999999999999864 79999999997543322 356889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
|||++|+|.+++.. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 99999999999864 3489999999999999999999999 9999999999999999999999999999988766
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
.....+.+||+.|||||++.+..|+.++||||+||++|||++|+.||.......... .+.....+.++...
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-----~i~~~~~~~~~~~~---- 294 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKNLH---- 294 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSSCCCCSCGG----
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-----HHHcCCCCCCCccc----
Confidence 666677899999999999999999999999999999999999999987543322111 11111122222211
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 841 DKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.....+.+++.+||+.||++|||++|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22335889999999999999999999875
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.5e-51 Score=439.19 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=204.9
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||+||+|+. .+|+.||||++....... ...+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 6799999999999999999976 479999999997654332 34578999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
|||++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999996543 23478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||....... ....+.....+.....
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--------~~~~i~~~~~~~~~~~-- 248 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN--------LVLKIISGSFPPVSLH-- 248 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHTCCCCCCTT--
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--------HHHHHHcCCCCCCCcc--
Confidence 333456789999999999999999999999999999999999999987543221 1222222232222211
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 841 DKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+.+++.+||+.||++|||++|+++
T Consensus 249 -~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 249 -YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1234889999999999999999999975
No 20
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.4e-51 Score=426.42 Aligned_cols=248 Identities=21% Similarity=0.301 Sum_probs=208.6
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||+||+|+. .+|+.||+|++.+.........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999975 579999999986432222233577999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++|+|.+++... +.+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 999999999999643 4599999999999999999999999 9999999999999999999999999999987644
Q ss_pred C--CCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 761 S--SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 761 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
. ....+.+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+....+..+...
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~~~~~p~~~ 257 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--------LIFAKIIKLEYDFPEKF 257 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCTTC
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCccc
Confidence 3 2345678999999999999999999999999999999999999998753322 12222333333333222
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKV 867 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev 867 (873)
. ..+.+++.+|++.||++|||++|+
T Consensus 258 s----~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 258 F----PKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp C----HHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred C----HHHHHHHHHHccCCHhHCcChHHH
Confidence 2 247899999999999999999885
No 21
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=434.18 Aligned_cols=249 Identities=24% Similarity=0.414 Sum_probs=210.8
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
..|++.+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|+.+|+.++|||||++++++.+.+..|+||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 56999999999999999999864 79999999997543332 356889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
|||++|+|.+++.. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 228 EFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp ECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 99999999999854 3489999999999999999999999 9999999999999999999999999999988766
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
.....+.+||+.|||||++.+..|+.++||||+||++|||++|+.||.......... .+.....+.+.....
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-----~i~~~~~~~~~~~~~--- 372 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKNLHK--- 372 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCCSCTTS---
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-----HHHcCCCCCCccccc---
Confidence 666677899999999999999999999999999999999999999987544322111 111112222222222
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 841 DKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+.+++.+||+.||++|||++|+++
T Consensus 373 -~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 373 -VSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp -SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1234789999999999999999999875
No 22
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.2e-50 Score=414.04 Aligned_cols=248 Identities=21% Similarity=0.326 Sum_probs=192.1
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||+||+|+. .+|+.||+|++.+.........+.+.+|+++++.++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999976 479999999997654444444677999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+ +|+|.+++... ..+++.++..++.||+.|++|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 57898888643 4599999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
....+.+||+.|||||++.+..+ +.++||||+||++|||+||+.||...... .....+.......+...
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--------~~~~~i~~~~~~~p~~~- 235 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNGVYTLPKFL- 235 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCTTS-
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCCCC-
Confidence 33456789999999999998876 57999999999999999999998753321 11222222333322221
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++|||++|+++
T Consensus 236 ---s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 236 ---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 224789999999999999999999986
No 23
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-49 Score=414.56 Aligned_cols=246 Identities=21% Similarity=0.324 Sum_probs=197.7
Q ss_pred CCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe----cceeEEE
Q 039344 605 DDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH----VRHLFIV 679 (873)
Q Consensus 605 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 679 (873)
++.+.||+|+||+||+|+.. +++.||+|++...... ....+.|.+|++++++++|||||+++++|.+ .+..|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 56678999999999999764 6899999998754332 2335779999999999999999999999875 3568999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCC--eeeCCCCCCCeeeC-CCCCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP--IVHRDISSKNVLLD-FENEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~-~~~~~kl~Dfg~a~~ 756 (873)
||||++|+|.+++.+. ..+++..+..++.||+.||+|||++ + |+||||||+|||++ .+|.+||+|||+|+.
T Consensus 108 mEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999999653 4589999999999999999999998 6 99999999999998 479999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.. .....+.+||+.|||||++.+ +|+.++||||+||++|||+||+.||....... .....+..+..+...
T Consensus 182 ~~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-------~~~~~i~~~~~~~~~ 251 (290)
T 3fpq_A 182 KR--ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-------QIYRRVTSGVKPASF 251 (290)
T ss_dssp CC--TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-------HHHHHHTTTCCCGGG
T ss_pred CC--CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-------HHHHHHHcCCCCCCC
Confidence 43 234456789999999998865 69999999999999999999999986433221 111122222211111
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
. ......+.+++.+||+.||++|||++|+++
T Consensus 252 ~--~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 D--KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G--GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C--ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 111224789999999999999999999986
No 24
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.7e-50 Score=474.96 Aligned_cols=451 Identities=21% Similarity=0.284 Sum_probs=345.0
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccC-----------CCCCCEEEcccCCCCCCCCcccc
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGN-----------FRFFSDLELSNNKLSGSIPPSLG 90 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-----------l~~L~~L~L~~n~l~~~~~~~~~ 90 (873)
.++.|+|++|++++.+|.+|+++++|++|+|++|.+. ..+..++. +..|+ +++++|.+.+.+|..+.
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~~~~~~~~~~~~~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEK-VNERLFGPKGISANMSDEQKQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGG-GTCCSBSTTSBCTTCCHHHHHHHH-THHHHHHTCCCGGGGSC
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccc-cCCccccccccccCchHHHHHHHH-hhHHHhhhccCchhhHH
Confidence 4566666666666666666666666666666666552 11111110 12233 44444444433333333
Q ss_pred c-ccccceeeccccccCCCCCccccCCcccCccccc--ccccccccCccccCCCCCcEEEccCCCCccc-----------
Q 039344 91 N-LSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLN--NNILSGSIPHSLGNLTNLATLYIYSNSLSAS----------- 156 (873)
Q Consensus 91 ~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----------- 156 (873)
. +.++..+++....+.. .....++.+.+. .|++++ +|..|+.+++|++|+|++|++++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 232 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENS 232 (636)
T ss_dssp HHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred HHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccccc
Confidence 1 1222222222222110 111233444443 578887 888899999999999999999874
Q ss_pred ------cccccC--CCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCC-Ccc-cCCccccCC------CCCCEEEc
Q 039344 157 ------ILGKIG--NLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNS-LSY-SIPSELGNL------RSLSNLSL 220 (873)
Q Consensus 157 ------~~~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L 220 (873)
.|..++ ++++|++|+|++|++.+.+|..|+++++|++|++++|+ +++ .+|..++.+ ++|++|++
T Consensus 233 ~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L 312 (636)
T 4eco_A 233 EYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYI 312 (636)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEEC
T ss_pred chhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEEC
Confidence 677777 89999999999999988899999999999999999998 887 788877776 89999999
Q ss_pred cCcccCCCccc--ccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCC-CCeEEccCcccc
Q 039344 221 GYNKLSGSIPI--SMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTS-LERVRLDRNYLT 297 (873)
Q Consensus 221 ~~N~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~-L~~L~L~~n~l~ 297 (873)
++|+++ .+|. .+..+++|++|++++|++++.+| .|..+++|++|++++|++...+..+..+++ |++|++++|.++
T Consensus 313 ~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 313 GYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp CSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS
T ss_pred CCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc
Confidence 999998 6777 88999999999999999987778 888999999999999999877777888888 999999999998
Q ss_pred cccccccccC--CCccEEeccCccccccCCCCCC-------CCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCcc
Q 039344 298 GNISESFYIY--PNLTYIDLSQNNFYGEISSDWG-------RCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHI 368 (873)
Q Consensus 298 ~~~~~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~-------~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i 368 (873)
.++ ..+... ++|++|++++|.+.+..|..+. .+++|+.|++++|++++..+..+..+++|++|+|++|.+
T Consensus 391 ~lp-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l 469 (636)
T 4eco_A 391 YIP-NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNML 469 (636)
T ss_dssp SCC-SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCC
T ss_pred ccc-hhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCC
Confidence 554 455544 4899999999999988888888 788999999999999854444556789999999999999
Q ss_pred CCCCCccccc-c-------ccccEEEecCccccCCcccccc--cccccccccccccccccccCCCcCchhhhhhhcccc-
Q 039344 369 VGEIPIELGK-L-------NFFIKLVLAHNQLSGQLSPKLG--SLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDL- 437 (873)
Q Consensus 369 ~~~~~~~~~~-l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~L- 437 (873)
+ .+|..... . ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+. +|+.|+|
T Consensus 470 ~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~--~L~~L~Ls 544 (636)
T 4eco_A 470 T-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSS--TLKGFGIR 544 (636)
T ss_dssp S-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCS--SCCEEECC
T ss_pred C-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCC--CCCEEECC
Confidence 8 56654433 2 28999999999999 5777776 89999999999999987 888888765 9999999
Q ss_pred -----cCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccc
Q 039344 438 -----SRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRG 492 (873)
Q Consensus 438 -----s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~ 492 (873)
++|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|++|||++|++..
T Consensus 545 ~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 545 NQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp SCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 56888999999999999999999999999 56677655 899999999998874
No 25
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.2e-49 Score=428.55 Aligned_cols=264 Identities=22% Similarity=0.353 Sum_probs=212.1
Q ss_pred HHHHHHHhcCCCCCceeeecCCeEEEEEEeC------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeE
Q 039344 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKV 666 (873)
Q Consensus 594 ~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l 666 (873)
..+++...++|++.+.||+|+||+||+|+.. +++.||||+++.... ....++|.+|++++++++ |||||++
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3445556688999999999999999999754 246899999975432 233578999999999995 5999999
Q ss_pred EeEEEec-ceeEEEEEeccCCChhhHhccccc-------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCC
Q 039344 667 YGFCLHV-RHLFIVYEYFKMCSLAVILSNDAA-------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRD 732 (873)
Q Consensus 667 ~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~D 732 (873)
+|+|.+. +..++|||||++|+|.++++.... ...+++.++..++.|||.||+|||++ +|+|||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999764 568999999999999999975432 24589999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcc
Q 039344 733 ISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 809 (873)
Q Consensus 733 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~ 809 (873)
|||+|||+++++.+||+|||+|+.+...... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999977554432 234678999999999999999999999999999999998 9999975
Q ss_pred cccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 810 ISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
........ ..+.+- .+++.+... ...+.+++.+||+.||++|||++||++.|+
T Consensus 291 ~~~~~~~~----~~i~~g--~~~~~p~~~----~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 291 VKIDEEFC----RRLKEG--TRMRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCCSHHHH----HHHHHT--CCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCHHHHHH----HHHHcC--CCCCCCccC----CHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 44221111 111111 122222222 224889999999999999999999999874
No 26
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.7e-49 Score=421.37 Aligned_cols=247 Identities=22% Similarity=0.277 Sum_probs=200.1
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
+.|+..++||+|+||+||+|+. .+|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5677888999999999999986 4799999999975321 247999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC-CeEEeccccccccCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN-EAHVSDFGIAKFLKP 759 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~~ 759 (873)
||+++|+|.+++... +.+++.++..++.||+.||+|||++ +|+||||||+|||++.+| .+||+|||+|+.+..
T Consensus 130 Ey~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 999999999999643 4599999999999999999999999 999999999999999998 699999999998754
Q ss_pred CCCC-----ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCC
Q 039344 760 DSSN-----WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834 (873)
Q Consensus 760 ~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (873)
.... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||.................. . ..++
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~--~~~~- 279 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP-I--REIP- 279 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG-G--GGSC-
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCC-c--hhcC-
Confidence 3321 22357999999999999999999999999999999999999999754432221111111000 0 0011
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHh
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 871 (873)
. .....+.+++.+||+.||++|||++|+++.|
T Consensus 280 -~----~~s~~~~~li~~~L~~dP~~R~sa~el~~~l 311 (336)
T 4g3f_A 280 -P----SCAPLTAQAIQEGLRKEPVHRASAMELRRKV 311 (336)
T ss_dssp -T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -c----cCCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence 1 1123478999999999999999999998875
No 27
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.3e-49 Score=470.99 Aligned_cols=437 Identities=20% Similarity=0.256 Sum_probs=265.5
Q ss_pred CCCCEEECCCCcccccCCccccCCCCCceEEc-cCCcccccCCCCc----------------------------------
Q 039344 21 KSLSDLELGNNKLSGSIPHSLGNLTNLATLYI-HTNSLSGSIPGEI---------------------------------- 65 (873)
Q Consensus 21 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-~~n~l~~~~p~~~---------------------------------- 65 (873)
..++.|+|++|++++.+|++|++|++|++|+| ++|.+++..|-..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46899999999999999999999999999999 8888876633221
Q ss_pred -----------------cCCCCCCEEEccc--CCCCCCCCcccccccccceeeccccccCC-----------------CC
Q 039344 66 -----------------GNFRFFSDLELSN--NKLSGSIPPSLGNLSNLATLYLDTNSLSN-----------------SI 109 (873)
Q Consensus 66 -----------------~~l~~L~~L~L~~--n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~ 109 (873)
.....++.+.+.. |++++ +|..|.++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1112223333332 56665 66677777777777777777775 26
Q ss_pred Ccccc--CCcccCcccccccccccccCccccCCCCCcEEEccCCC-Ccc-ccccccC-------CCCCCCEEEccCCcCc
Q 039344 110 PSELG--NLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNS-LSA-SILGKIG-------NLKSLSNLQLSENNFN 178 (873)
Q Consensus 110 ~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~-------~l~~L~~L~L~~n~i~ 178 (873)
|..++ ++++|++|+|++|.+.+.+|..|+.+++|++|+|++|+ +++ ..|..+. .+++|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 66655 77777777777777666677777777777777777776 654 3343333 3347777777777776
Q ss_pred cCCCc--cccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCC-ccEEecccccCCCCCch
Q 039344 179 GSIPP--SLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSN-LTYLNLFENSLSGAIPY 255 (873)
Q Consensus 179 ~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~ 255 (873)
.+|. .++++++|+.|+|++|.++ .+| .|+.+++|++|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 5565 6677777777777777776 555 6667777777777777776 56666666666 777777777776 4555
Q ss_pred hhcCCCC--CcEEEccCCcCcCcCCcCC------CCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCC
Q 039344 256 EYRNLVK--LTILLLGHNQFRGPIPILR------NLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSD 327 (873)
Q Consensus 256 ~~~~l~~--L~~L~L~~N~l~~~~~~l~------~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 327 (873)
.+..+.. |+.|++++|++.+..+.+. .+++|+.|+|++|.++.++...+..+++|+.|+|++|++. .+|..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 715 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPEN 715 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChH
Confidence 5555433 7777777777766443322 3346666777777666655555556666666666666666 33332
Q ss_pred CCC--------CCCCCeeeeccccCCccCCcccc--CCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCcc
Q 039344 328 WGR--------CPKLSTLDFSINNITGNVPPEIG--HSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLS 397 (873)
Q Consensus 328 ~~~--------l~~L~~L~l~~N~i~~~~~~~~~--~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 397 (873)
+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|.|++ +|..+..+++|+.|+|++|+
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------ 787 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------ 787 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------
T ss_pred HhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------
Confidence 222 126666666666666 4555554 66666666666666664 56666666666666665532
Q ss_pred cccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhhcc
Q 039344 398 PKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKM 477 (873)
Q Consensus 398 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 477 (873)
++++|++.+.+|..+..+. +|+.|+|++|++ +.+|..+. ++|+.|+|++|++..+.+..+...
T Consensus 788 ------------~ls~N~l~~~ip~~l~~L~--~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~ 850 (876)
T 4ecn_A 788 ------------DAEGNRILRQWPTGITTCP--SLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPY 850 (876)
T ss_dssp ------------CTTCCBCCCCCCTTGGGCS--SCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHH
T ss_pred ------------CcccccccccChHHHhcCC--CCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHcccc
Confidence 2223444444444444333 444444444444 23333332 244444444444444444444443
Q ss_pred CCCcEEecCCCc
Q 039344 478 NGLLHIDISYNE 489 (873)
Q Consensus 478 ~~L~~l~ls~N~ 489 (873)
..+..+.|++|+
T Consensus 851 ~~~~~~~L~~n~ 862 (876)
T 4ecn_A 851 IEAGMYVLLYDK 862 (876)
T ss_dssp HHTTCCEEECCT
T ss_pred ccchheeecCCC
Confidence 344444444443
No 28
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8.1e-49 Score=457.33 Aligned_cols=478 Identities=21% Similarity=0.207 Sum_probs=401.3
Q ss_pred CCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeec
Q 039344 21 KSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYL 100 (873)
Q Consensus 21 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 100 (873)
+.....|.++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|.+|.++++|++|+|
T Consensus 5 ~~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 5 DASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp CTTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 34455789999998 6777664 89999999999999888999999999999999999999888899999999999999
Q ss_pred cccccCCCCCccccCCcccCccccccccccc-ccCccccCCCCCcEEEccCCC-CccccccccCCCCCCCEEEccCCcCc
Q 039344 101 DTNSLSNSIPSELGNLRSLSNLQLNNNILSG-SIPHSLGNLTNLATLYIYSNS-LSASILGKIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 101 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~i~ 178 (873)
++|++++..|..|.++++|++|++++|.+++ ..|..|+.+++|++|++++|. +..+.+..|.++++|++|++++|.++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998777789999999999999999986 356789999999999999998 66666678999999999999999999
Q ss_pred cCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCc--c-cccCCCCCccEEecccccCCCCCch
Q 039344 179 GSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSI--P-ISMGNLSNLTYLNLFENSLSGAIPY 255 (873)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~L~L~~n~l~~~~~~ 255 (873)
+..|..+..+++|++|++++|.+.......+..+++|++|++++|++++.. + .....+++|+.|++++|.+++..+.
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 241 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH
T ss_pred ccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH
Confidence 999999999999999999999998443334567999999999999998642 2 2334678999999999998765443
Q ss_pred h----hcCCCCCcEEEccCCcCcCcC-------CcCCCCCCCCeEEccCccccccc-----ccccccCCCccEEeccCcc
Q 039344 256 E----YRNLVKLTILLLGHNQFRGPI-------PILRNLTSLERVRLDRNYLTGNI-----SESFYIYPNLTYIDLSQNN 319 (873)
Q Consensus 256 ~----~~~l~~L~~L~L~~N~l~~~~-------~~l~~l~~L~~L~L~~n~l~~~~-----~~~~~~~~~L~~L~Ls~N~ 319 (873)
. +..+++|+.+++++|.+.+.. ..+..+++|+.|.+.++.+.... ...+...++|+.|++++|.
T Consensus 242 ~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~ 321 (549)
T 2z81_A 242 ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSK 321 (549)
T ss_dssp HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSC
T ss_pred HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCc
Confidence 3 466789999999999987632 34577899999999999876532 1224456789999999999
Q ss_pred ccccCCCCC-CCCCCCCeeeeccccCCccCCc---cccCCCCCCEEeccCCccCCCCC--ccccccccccEEEecCcccc
Q 039344 320 FYGEISSDW-GRCPKLSTLDFSINNITGNVPP---EIGHSSQLGVLDLSSNHIVGEIP--IELGKLNFFIKLVLAHNQLS 393 (873)
Q Consensus 320 l~~~~~~~~-~~l~~L~~L~l~~N~i~~~~~~---~~~~~~~L~~L~Ls~N~i~~~~~--~~~~~l~~L~~L~L~~N~l~ 393 (873)
+. .+|..+ ..+++|+.|++++|++++..|. .++.+++|++|+|++|++++..+ ..+..+++|++|++++|+++
T Consensus 322 l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 400 (549)
T 2z81_A 322 VF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH 400 (549)
T ss_dssp CC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred cc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc
Confidence 97 555555 5799999999999999976643 37889999999999999985432 45889999999999999999
Q ss_pred CCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchh
Q 039344 394 GQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSC 473 (873)
Q Consensus 394 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 473 (873)
.+|..+..+++|+.|+|++|+|+ .+|..+. .+|+.|||++|++++.+ ..+++|++|+|++|+|+. +|.
T Consensus 401 -~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~----~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~-ip~- 468 (549)
T 2z81_A 401 -PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP----QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKT-LPD- 468 (549)
T ss_dssp -CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC----TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSS-CCC-
T ss_pred -cCChhhcccccccEEECCCCCcc-cccchhc----CCceEEECCCCChhhhc----ccCChhcEEECCCCccCc-CCC-
Confidence 57888999999999999999997 4555443 38999999999999754 478999999999999995 555
Q ss_pred hhccCCCcEEecCCCcccccCCCC-CcccCCCcccccCCCCc
Q 039344 474 FEKMNGLLHIDISYNELRGSIPNS-TTFKDAPIEALQGNKGL 514 (873)
Q Consensus 474 ~~~~~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~l 514 (873)
...+++|++|||++|++++.+|.. ..++......+.+|+-.
T Consensus 469 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 510 (549)
T 2z81_A 469 ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510 (549)
T ss_dssp GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBC
T ss_pred cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCcc
Confidence 467999999999999999877753 34555566667777543
No 29
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.6e-50 Score=420.76 Aligned_cols=249 Identities=22% Similarity=0.293 Sum_probs=199.5
Q ss_pred cCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
++|++.+.||+|+||+||+|+.. +++.||+|+++....... ....+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 57999999999999999999752 578999999875432221 1346789999999999999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999999653 4599999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 758 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 758 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
........+.+||+.|||||++.+..|+.++||||+||++|||+||+.||....... ....+....++.+..
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--------~~~~i~~~~~~~p~~ 248 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE--------TMTMILKAKLGMPQF 248 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCTT
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH--------HHHHHHcCCCCCCCc
Confidence 655555567889999999999999999999999999999999999999987543221 222222333333322
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCH-----HHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTM-----QKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 869 (873)
. ...+.+++.+||+.||++|||+ +|+++
T Consensus 249 ~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 L----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp S----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred C----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 2 2247899999999999999984 56653
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.8e-49 Score=457.76 Aligned_cols=454 Identities=20% Similarity=0.204 Sum_probs=299.8
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTN 103 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (873)
+.||+++|+++ .+|..+. ++|++|+|++|++++..|+.|.++++|++|+|++|++++..|.+|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 35556666655 3444443 55666666666665544555555666666666666665555555666666666666666
Q ss_pred ccCCCCCccccCCcccCccccccccccc-ccCccccCCCCCcEEEccCCCCccccccccCCCCCC--CEEEccCCcC--c
Q 039344 104 SLSNSIPSELGNLRSLSNLQLNNNILSG-SIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSL--SNLQLSENNF--N 178 (873)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i--~ 178 (873)
+++ .+|.. .+++|++|+|++|.+++ ..|..|+.+++|++|++++|++++ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 655 33333 55566666666666554 245556666666666666665544 234444455 6666666666 4
Q ss_pred cCCCccccCCC-CCcEEeccCCCCcccCC-ccccCCCCCCEEEccCcc-------cCCCcccccCCCCCccEEecccccC
Q 039344 179 GSIPPSLGNLS-NLATLYLDTNSLSYSIP-SELGNLRSLSNLSLGYNK-------LSGSIPISMGNLSNLTYLNLFENSL 249 (873)
Q Consensus 179 ~~~~~~~~~l~-~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~n~l 249 (873)
+..|..+..+. ....+++++|.+.+..+ ..+..+++|+.|++++|. +.+..+ .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 45555555443 23344555555543332 345556666666666665 443333 456666666666666665
Q ss_pred CCCCchhhc---CCCCCcEEEccCCcCcC-cCCcC-----CCCCCCCeEEccCcccccccccccccC---CCccEEeccC
Q 039344 250 SGAIPYEYR---NLVKLTILLLGHNQFRG-PIPIL-----RNLTSLERVRLDRNYLTGNISESFYIY---PNLTYIDLSQ 317 (873)
Q Consensus 250 ~~~~~~~~~---~l~~L~~L~L~~N~l~~-~~~~l-----~~l~~L~~L~L~~n~l~~~~~~~~~~~---~~L~~L~Ls~ 317 (873)
++..+..+. ..++|++|++++|++.+ .+..+ ..+++|+.+++++|.+ .++...+..+ ++|+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~ 311 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSG 311 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEES
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCC
Confidence 532221111 13467777777777664 33334 6677777777777777 4443333333 5688888888
Q ss_pred ccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCC--CCCccccccccccEEEecCccccCC
Q 039344 318 NNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVG--EIPIELGKLNFFIKLVLAHNQLSGQ 395 (873)
Q Consensus 318 N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~--~~~~~~~~l~~L~~L~L~~N~l~~~ 395 (873)
|.+.... .+..+++|+.|++++|++++..|..++.+++|++|+|++|++++ .+|..+..+++|+.|++++|++++.
T Consensus 312 n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 389 (520)
T 2z7x_B 312 TRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYD 389 (520)
T ss_dssp SCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCC
T ss_pred Ccccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcc
Confidence 8875432 12577888888888888888788888888888888888888875 4556788888899999999988874
Q ss_pred ccc-ccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhh
Q 039344 396 LSP-KLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCF 474 (873)
Q Consensus 396 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 474 (873)
+|. .+..+++|+.|+|++|++++..|..+. .+|+.|||++|+++ .+|..+..+++|+.|+|++|+|+++++..|
T Consensus 390 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~----~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~ 464 (520)
T 2z7x_B 390 EKKGDCSWTKSLLSLNMSSNILTDTIFRCLP----PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIF 464 (520)
T ss_dssp GGGCSCCCCTTCCEEECCSSCCCGGGGGSCC----TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTT
T ss_pred cccchhccCccCCEEECcCCCCCcchhhhhc----ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHh
Confidence 454 578889999999999999888877765 38899999999998 577777799999999999999997655569
Q ss_pred hccCCCcEEecCCCcccccCC
Q 039344 475 EKMNGLLHIDISYNELRGSIP 495 (873)
Q Consensus 475 ~~~~~L~~l~ls~N~l~~~~p 495 (873)
..+++|++|++++|++++..+
T Consensus 465 ~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 465 DRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCcccEEECcCCCCcccCC
Confidence 999999999999999997654
No 31
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.3e-49 Score=417.78 Aligned_cols=261 Identities=22% Similarity=0.301 Sum_probs=199.0
Q ss_pred cCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc----eeE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR----HLF 677 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~ 677 (873)
++|.+.+.||+|+||+||+|++. |+.||||++... ......+..|+..+.+++|||||+++|+|.+++ ..|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 45778899999999999999985 899999998642 111222344566667889999999999998754 579
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC-----CCCeeeCCCCCCCeeeCCCCCeEEeccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC-----FPPIVHRDISSKNVLLDFENEAHVSDFG 752 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-----~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 752 (873)
+||||+++|+|.++++.. .++|+.+.+++.|++.||+|||+++ .++|+||||||+|||++.++.+||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999999643 4899999999999999999999762 3589999999999999999999999999
Q ss_pred cccccCCCCCC----ccccccccccccccccccC------CCCCcchhHHHHHHHHHHHhCCCCCcccccc--hhhh---
Q 039344 753 IAKFLKPDSSN----WTELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFISSM--SFSS--- 817 (873)
Q Consensus 753 ~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDv~s~G~il~el~tg~~P~~~~~~~--~~~~--- 817 (873)
+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||+.||...... .+..
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99877544332 2245799999999998764 4678999999999999999999887543221 1111
Q ss_pred --hhhhhh----hhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 818 --LNLNIA----LDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 818 --~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...... .....++.++.... ..+....+.+++.+||+.||++||||+||++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCcccc-chHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 111111 22223333332221 2244556889999999999999999999999874
No 32
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.4e-49 Score=468.71 Aligned_cols=431 Identities=17% Similarity=0.268 Sum_probs=231.4
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCccc------c------cCCccccCCCCCceEEccCCcccccCCCCccCC-C-
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLS------G------SIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNF-R- 69 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~------~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~- 69 (873)
+.+|.+.+.+|.+|++++.|+.|+|++|.+. + .+|... +..|+ +++++|.+.+..|..+..+ .
T Consensus 88 L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 88 LEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp CTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHH
T ss_pred ecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHH
Confidence 4689999999999999999999999999872 1 233322 34556 6666666665555544411 1
Q ss_pred -----------------CCCEEEc--ccCCCCCCCCcccccccccceeeccccccCCC-----------------CCccc
Q 039344 70 -----------------FFSDLEL--SNNKLSGSIPPSLGNLSNLATLYLDTNSLSNS-----------------IPSEL 113 (873)
Q Consensus 70 -----------------~L~~L~L--~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~~~~~ 113 (873)
.++.+.+ .+|++++ +|..|+++++|++|+|++|++++. +|..+
T Consensus 165 l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 165 CINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp HHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 1111111 1344444 455555555555555555555542 45555
Q ss_pred c--CCcccCcccccccccccccCccccCCCCCcEEEccCCC-Ccc-ccccccCCC------CCCCEEEccCCcCccCCCc
Q 039344 114 G--NLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNS-LSA-SILGKIGNL------KSLSNLQLSENNFNGSIPP 183 (873)
Q Consensus 114 ~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~n~i~~~~~~ 183 (873)
. ++++|++|+|++|.+.+.+|..|+++++|++|++++|+ +++ ..|..+..+ ++|++|+|++|+++ .+|.
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 4 55555555555555555555555555555555555554 444 334434333 55555555555555 4444
Q ss_pred --cccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCC-ccEEecccccCCCCCchhhcCC
Q 039344 184 --SLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSN-LTYLNLFENSLSGAIPYEYRNL 260 (873)
Q Consensus 184 --~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l 260 (873)
.++++++|++|++++|.+++.+| .|..+++|++|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+..+
T Consensus 323 ~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~ 399 (636)
T 4eco_A 323 ETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAK 399 (636)
T ss_dssp HHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTT
T ss_pred hhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhc
Confidence 45555555555555555554444 4555555555555555555 44444555555 555555555555 344444433
Q ss_pred C--CCcEEEccCCcCcCcCC-cCC-------CCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCC
Q 039344 261 V--KLTILLLGHNQFRGPIP-ILR-------NLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGR 330 (873)
Q Consensus 261 ~--~L~~L~L~~N~l~~~~~-~l~-------~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 330 (873)
. +|+.|++++|++.+..+ .+. .+++|++|++++|.++.++...+..+++|++|+|++|+++...+..+..
T Consensus 400 ~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 479 (636)
T 4eco_A 400 SVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKD 479 (636)
T ss_dssp CSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEE
T ss_pred ccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcc
Confidence 2 55555555555554222 233 4455556666666655555555555566666666666665222222222
Q ss_pred C-------CCCCeeeeccccCCccCCcccc--CCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCcccccc
Q 039344 331 C-------PKLSTLDFSINNITGNVPPEIG--HSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLG 401 (873)
Q Consensus 331 l-------~~L~~L~l~~N~i~~~~~~~~~--~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 401 (873)
. ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+
T Consensus 480 ~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~---------- 547 (636)
T 4eco_A 480 ENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR---------- 547 (636)
T ss_dssp TTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB----------
T ss_pred ccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc----------
Confidence 2 25666666666665 4555554 56666666666666664 55566666666666664322
Q ss_pred cccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCcccc
Q 039344 402 SLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLS 467 (873)
Q Consensus 402 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 467 (873)
++++|++.+.+|..+..+. +|+.|+|++|++ +.+|..+. ++|+.|+|++|++.
T Consensus 548 --------~ls~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 548 --------DAQGNRTLREWPEGITLCP--SLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp --------CTTCCBCCCCCCTTGGGCS--SCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred --------ccccCcccccChHHHhcCC--CCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 2234444455555554443 555555555555 23344333 45555555555554
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.4e-48 Score=451.88 Aligned_cols=450 Identities=21% Similarity=0.230 Sum_probs=386.2
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG 83 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 83 (873)
+++|+|+ .+|..+. ++|++|+|++|++++..|++|.++++|++|+|++|++++..|++|+++++|++|+|++|+++
T Consensus 7 ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~- 82 (520)
T 2z7x_B 7 RSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV- 82 (520)
T ss_dssp CTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-
T ss_pred cCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-
Confidence 4678898 5788777 89999999999999888899999999999999999999888999999999999999999999
Q ss_pred CCCcccccccccceeeccccccCC-CCCccccCCcccCcccccccccccccCccccCCCCC--cEEEccCCCC--ccccc
Q 039344 84 SIPPSLGNLSNLATLYLDTNSLSN-SIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNL--ATLYIYSNSL--SASIL 158 (873)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~ 158 (873)
.+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++ ..|..+++| ++|++++|.+ .+..+
T Consensus 83 ~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~ 157 (520)
T 2z7x_B 83 KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDP 157 (520)
T ss_dssp EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCT
T ss_pred ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccccccc
Confidence 45555 89999999999999997 478999999999999999999985 467788888 9999999999 77777
Q ss_pred cccCCCC-CCCEEEccCCcCccCCC-ccccCCCCCcEEeccCCC-------CcccCCccccCCCCCCEEEccCcccCCCc
Q 039344 159 GKIGNLK-SLSNLQLSENNFNGSIP-PSLGNLSNLATLYLDTNS-------LSYSIPSELGNLRSLSNLSLGYNKLSGSI 229 (873)
Q Consensus 159 ~~~~~l~-~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 229 (873)
..+..+. +...+++++|.+.+..+ ..+..+++|+.|++++|. +.+.++ .+..+++|+.|++++|.+++..
T Consensus 158 ~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~ 236 (520)
T 2z7x_B 158 EGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNS 236 (520)
T ss_dssp TTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHH
T ss_pred ccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHH
Confidence 7777665 34467889999876554 467889999999999997 665555 7889999999999999987532
Q ss_pred ccccC---CCCCccEEecccccCCCCCchhh-----cCCCCCcEEEccCCcCcCcC-CcCCCC---CCCCeEEccCcccc
Q 039344 230 PISMG---NLSNLTYLNLFENSLSGAIPYEY-----RNLVKLTILLLGHNQFRGPI-PILRNL---TSLERVRLDRNYLT 297 (873)
Q Consensus 230 ~~~~~---~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~-~~l~~l---~~L~~L~L~~n~l~ 297 (873)
+..+. ..++|++|++++|++++..|..+ ..+++|+.+++++|.+ ..+ ..+..+ ++|+.|++++|.+.
T Consensus 237 ~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~ 315 (520)
T 2z7x_B 237 FIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMV 315 (520)
T ss_dssp HHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCC
T ss_pred HHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCccc
Confidence 22111 24699999999999998888888 8999999999999999 322 233333 67999999999987
Q ss_pred cccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCc--cCCccccCCCCCCEEeccCCccCCCCCc-
Q 039344 298 GNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITG--NVPPEIGHSSQLGVLDLSSNHIVGEIPI- 374 (873)
Q Consensus 298 ~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~--~~~~~~~~~~~L~~L~Ls~N~i~~~~~~- 374 (873)
.... +..+++|++|++++|++++..|..+..+++|+.|++++|++++ .+|..++.+++|++|+|++|.+++.+|.
T Consensus 316 ~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~ 393 (520)
T 2z7x_B 316 HMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG 393 (520)
T ss_dssp CCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC
T ss_pred cccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccc
Confidence 6542 2678999999999999999899999999999999999999986 5567899999999999999999975665
Q ss_pred cccccccccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhc
Q 039344 375 ELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQ 454 (873)
Q Consensus 375 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 454 (873)
.+..+++|++|++++|++++..|..+. ++|+.|||++|+|+ .+|..+..+. +|++|+|++|++++..+..+..++
T Consensus 394 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~--~L~~L~L~~N~l~~l~~~~~~~l~ 468 (520)
T 2z7x_B 394 DCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE--ALQELNVASNQLKSVPDGIFDRLT 468 (520)
T ss_dssp SCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT--TCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC--CCCEEECCCCcCCccCHHHhccCC
Confidence 488899999999999999887776664 79999999999998 8888887655 999999999999975555589999
Q ss_pred ccceecccCccccCCCc
Q 039344 455 SLEKLNLSHNSLSGLIP 471 (873)
Q Consensus 455 ~L~~L~L~~N~l~~~~~ 471 (873)
+|+.|++++|++++..+
T Consensus 469 ~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 469 SLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TCCEEECCSSCBCCCHH
T ss_pred cccEEECcCCCCcccCC
Confidence 99999999999997654
No 34
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-47 Score=458.64 Aligned_cols=433 Identities=19% Similarity=0.220 Sum_probs=372.0
Q ss_pred ccCCcccccCCccccCCCCCCEEEC-CCCcccccCCccc-----------------------------------------
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLEL-GNNKLSGSIPHSL----------------------------------------- 41 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L-~~n~l~~~~p~~~----------------------------------------- 41 (873)
+.+|+|.+.+|.+|++++.|+.|+| ++|.+++..|-.-
T Consensus 330 Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~ 409 (876)
T 4ecn_A 330 LAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAIN 409 (876)
T ss_dssp CTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred CccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhh
Confidence 4689999999999999999999999 8998876533210
Q ss_pred ----------cCCCCCceEEccC--CcccccCCCCccCCCCCCEEEcccCCCCC-----------------CCCcccc--
Q 039344 42 ----------GNLTNLATLYIHT--NSLSGSIPGEIGNFRFFSDLELSNNKLSG-----------------SIPPSLG-- 90 (873)
Q Consensus 42 ----------~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~-- 90 (873)
.....++.+.+.. |++++ +|..|+++++|++|+|++|.+++ .+|..++
T Consensus 410 ~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~ 488 (876)
T 4ecn_A 410 RNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWS 488 (876)
T ss_dssp TCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGG
T ss_pred hCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhc
Confidence 1223445555554 88997 89999999999999999999997 3888877
Q ss_pred cccccceeeccccccCCCCCccccCCcccCcccccccc-ccc-ccCccccCCC-------CCcEEEccCCCCcccccc--
Q 039344 91 NLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNI-LSG-SIPHSLGNLT-------NLATLYIYSNSLSASILG-- 159 (873)
Q Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~L~~n~l~~~~~~-- 159 (873)
++++|++|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..++.++ +|+.|+|++|+++. .+.
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~-ip~~~ 567 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE-FPASA 567 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCB-CCCHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCc-cCChh
Confidence 99999999999999999999999999999999999998 887 7888777665 99999999999984 455
Q ss_pred ccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCC-CCEEEccCcccCCCcccccCCCCC
Q 039344 160 KIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRS-LSNLSLGYNKLSGSIPISMGNLSN 238 (873)
Q Consensus 160 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~ 238 (873)
.|..+++|++|+|++|+++ .+| .|..+++|+.|+|++|.++ .+|..+..+++ |++|+|++|+++ .+|..+..++.
T Consensus 568 ~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~ 643 (876)
T 4ecn_A 568 SLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV 643 (876)
T ss_dssp HHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCS
T ss_pred hhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhcccc
Confidence 8999999999999999999 677 8999999999999999999 78888999999 999999999999 67878777654
Q ss_pred --ccEEecccccCCCCCchhh---c--CCCCCcEEEccCCcCcCcCCc-CCCCCCCCeEEccCcccccccccccccC---
Q 039344 239 --LTYLNLFENSLSGAIPYEY---R--NLVKLTILLLGHNQFRGPIPI-LRNLTSLERVRLDRNYLTGNISESFYIY--- 307 (873)
Q Consensus 239 --L~~L~L~~n~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~~~~--- 307 (873)
|+.|+|++|++.+..|... . .+++|+.|++++|++...+.. +..+++|+.|+|++|.++.++...+...
T Consensus 644 ~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~ 723 (876)
T 4ecn_A 644 YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGN 723 (876)
T ss_dssp SCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSC
T ss_pred CCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccccc
Confidence 9999999999987665332 2 345899999999999975554 4588999999999999998777666544
Q ss_pred ----CCccEEeccCccccccCCCCCC--CCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCcccccccc
Q 039344 308 ----PNLTYIDLSQNNFYGEISSDWG--RCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNF 381 (873)
Q Consensus 308 ----~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~ 381 (873)
++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..++.+++|+.|+|++|+
T Consensus 724 l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~-------------- 787 (876)
T 4ecn_A 724 YKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR-------------- 787 (876)
T ss_dssp CTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB--------------
T ss_pred ccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC--------------
Confidence 39999999999999 6788887 89999999999999997 79899999999999999987
Q ss_pred ccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecc
Q 039344 382 FIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNL 461 (873)
Q Consensus 382 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 461 (873)
++++|++.+.+|..+..+++|+.|+|++|+| +.+|..+.. +|+.|||++|++....+..++....+..+.|
T Consensus 788 ----~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~----~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L 858 (876)
T 4ecn_A 788 ----DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTP----QLYILDIADNPNISIDVTSVCPYIEAGMYVL 858 (876)
T ss_dssp ----CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCS----SSCEEECCSCTTCEEECGGGHHHHHTTCCEE
T ss_pred ----CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcC----CCCEEECCCCCCCccChHHccccccchheee
Confidence 5677888888888888888999999999998 688887652 8889999999998888888888888888888
Q ss_pred cCcccc
Q 039344 462 SHNSLS 467 (873)
Q Consensus 462 ~~N~l~ 467 (873)
.+|++.
T Consensus 859 ~~n~~~ 864 (876)
T 4ecn_A 859 LYDKTQ 864 (876)
T ss_dssp ECCTTS
T ss_pred cCCCcc
Confidence 888765
No 35
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1e-47 Score=405.51 Aligned_cols=250 Identities=22% Similarity=0.398 Sum_probs=193.1
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc------
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR------ 674 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 674 (873)
.+|++.+.||+|+||+||+|+.+ +|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 46899999999999999999764 79999999987542 2334577999999999999999999999987644
Q ss_pred ------eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEE
Q 039344 675 ------HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748 (873)
Q Consensus 675 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl 748 (873)
..|+||||+++|+|.+++.........++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3699999999999999998765545567777899999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCC------------ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhh
Q 039344 749 SDFGIAKFLKPDSSN------------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFS 816 (873)
Q Consensus 749 ~Dfg~a~~~~~~~~~------------~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~ 816 (873)
+|||+|+........ .++.+||+.|||||++.+..|+.++||||+||++|||++ ||.....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---- 232 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---- 232 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----
Confidence 999999877543221 234579999999999999999999999999999999996 7653111
Q ss_pred hhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 817 SLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.......+.+...+. ..........+++.+||+.||++|||+.|+++
T Consensus 233 ---~~~~~~~~~~~~~p~---~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 ---RVRTLTDVRNLKFPP---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp ---HHHHHHHHHTTCCCH---HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHHhcCCCCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111122222223221 12233345678999999999999999999986
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.9e-46 Score=443.08 Aligned_cols=469 Identities=23% Similarity=0.238 Sum_probs=356.0
Q ss_pred cCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCccccc
Q 039344 12 SIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGN 91 (873)
Q Consensus 12 ~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 91 (873)
.+|..++ +++++|||++|+|+++.|.+|.++++|++|+|++|+|+++.|++|+++++|++|+|++|+|++..+.+|.+
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 5677776 58999999999999888899999999999999999999888999999999999999999999888889999
Q ss_pred ccccceeeccccccCCCCCccccCCcccCccccccccccc-ccCccccCCCCCcEEEccCCCCccccccccCCCCCC---
Q 039344 92 LSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSG-SIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSL--- 167 (873)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--- 167 (873)
+++|++|+|++|+++++.+..|+++++|++|+|++|.+++ ..|..++.+++|++|++++|+++++.+..|..+.++
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~ 202 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 202 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhh
Confidence 9999999999999998777889999999999999999975 357889999999999999999999888887765544
Q ss_pred -CEEEccCCcCccCCCccccCCCCCcEEeccCCCCcc-cCCccc------------------------------------
Q 039344 168 -SNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSY-SIPSEL------------------------------------ 209 (873)
Q Consensus 168 -~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~------------------------------------ 209 (873)
..++++.|.++...+..+. ...+..+++.+|.... ..+..+
T Consensus 203 ~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l 281 (635)
T 4g8a_A 203 NLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 281 (635)
T ss_dssp CCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGS
T ss_pred hhhhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccch
Confidence 4788999999865554443 3345666666654331 111112
Q ss_pred ---------------------cCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEc
Q 039344 210 ---------------------GNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLL 268 (873)
Q Consensus 210 ---------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 268 (873)
..+.+++.+++.+|.+... ..+....+|+.|++.+|.+....+ ..+..|+.+++
T Consensus 282 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l 356 (635)
T 4g8a_A 282 TIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTF 356 (635)
T ss_dssp EEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEE
T ss_pred hhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCc---ccchhhhhccc
Confidence 2233444555555544422 123344566666666666654333 23456666666
Q ss_pred cCCcCcCcCCcCCCCCCCCeEEccCcccccc--cccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCc
Q 039344 269 GHNQFRGPIPILRNLTSLERVRLDRNYLTGN--ISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITG 346 (873)
Q Consensus 269 ~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~ 346 (873)
.+|.+.... ....+++|+.|++++|.+... .+..+..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|+...
T Consensus 357 ~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 357 TSNKGGNAF-SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp ESCCSCCBC-CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEES
T ss_pred ccccCCCCc-ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccc
Confidence 666655432 334577888888888877633 34445567778888888887763 45567778888888888777654
Q ss_pred cCC-ccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccc-cCCcccccccccccccccccccccccccCCCc
Q 039344 347 NVP-PEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQL-SGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSL 424 (873)
Q Consensus 347 ~~~-~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 424 (873)
..+ ..+..+.+++.++++.|.+.+..+..+..++.|+.|++++|.+ .+..|..+..+++|+.|||++|+|++..|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 433 4567778888888888888877777788888888888888864 44566778888888888888888887778888
Q ss_pred CchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhhhcc-CCCcEEecCCCcccc
Q 039344 425 GNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKM-NGLLHIDISYNELRG 492 (873)
Q Consensus 425 ~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~L~~l~ls~N~l~~ 492 (873)
+++. +|++|+|++|+|++..|..+..+++|+.|+|++|+|++.+|..|..+ ++|++|+|++|+|.+
T Consensus 515 ~~l~--~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 515 NSLS--SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TTCT--TCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred cCCC--CCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 8766 88888888888888888888888888888888888888888888777 578888888888875
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.9e-46 Score=432.35 Aligned_cols=459 Identities=20% Similarity=0.183 Sum_probs=360.5
Q ss_pred CCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeec
Q 039344 21 KSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYL 100 (873)
Q Consensus 21 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 100 (873)
...+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|.+|.++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 34578999999998 4776554 78999999999999777788999999999999999999888889999999999999
Q ss_pred cccccCCCCCccccCCcccCcccccccccccc-cCccccCCCCCcEEEccCCCCccccccccCCCCCC--CEEEccCCcC
Q 039344 101 DTNSLSNSIPSELGNLRSLSNLQLNNNILSGS-IPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSL--SNLQLSENNF 177 (873)
Q Consensus 101 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~i 177 (873)
++|+++ .+|.. .+++|++|+|++|.+++. .|..|+++++|++|++++|+++... +..+++| ++|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~---~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD---LLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT---TGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCc---hhhhhhceeeEEEeecccc
Confidence 999998 56655 789999999999999863 4578999999999999999987643 4444555 9999999998
Q ss_pred --ccCCCccccCCC-CCcEEeccCCCCcccCCc-cccCCCCCCEEEccCcccC----CCcccccCCCCCccEEecccccC
Q 039344 178 --NGSIPPSLGNLS-NLATLYLDTNSLSYSIPS-ELGNLRSLSNLSLGYNKLS----GSIPISMGNLSNLTYLNLFENSL 249 (873)
Q Consensus 178 --~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~n~l 249 (873)
++..|..+..+. ..-.+++++|.+.+..+. .+..+++|+.|++++|+.. ......+..+++|+.|+++++.+
T Consensus 182 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEE
T ss_pred cccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcC
Confidence 777787777664 222567888888764443 4667889999999988521 01223466778888888888776
Q ss_pred CCCCchh---hcCCCCCcEEEccCCcCcCcC-CcC-----CCCCCCCeEEccCccccccccccccc---CCCccEEeccC
Q 039344 250 SGAIPYE---YRNLVKLTILLLGHNQFRGPI-PIL-----RNLTSLERVRLDRNYLTGNISESFYI---YPNLTYIDLSQ 317 (873)
Q Consensus 250 ~~~~~~~---~~~l~~L~~L~L~~N~l~~~~-~~l-----~~l~~L~~L~L~~n~l~~~~~~~~~~---~~~L~~L~Ls~ 317 (873)
.+..... .....+|++|++++|++.+.. ..+ ..++.|+.++++.|.+ .++...+.. .++|++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~~ 340 (562)
T 3a79_B 262 TWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKEALYSVFAEMNIKMLSISD 340 (562)
T ss_dssp CHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTCCCSEEEEES
T ss_pred cHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecChhhhhhhhccCcceEEEccC
Confidence 5321111 123358999999999998633 333 5666666666666666 333232222 36799999999
Q ss_pred ccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCC--CCccccccccccEEEecCccccCC
Q 039344 318 NNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGE--IPIELGKLNFFIKLVLAHNQLSGQ 395 (873)
Q Consensus 318 N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~--~~~~~~~l~~L~~L~L~~N~l~~~ 395 (873)
|.+.... ....+++|+.|++++|++++..|..++.+++|++|+|++|++++. +|..+..+++|+.|++++|++++.
T Consensus 341 n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 418 (562)
T 3a79_B 341 TPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSH 418 (562)
T ss_dssp SCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSC
T ss_pred CCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCc
Confidence 9986322 126789999999999999988999999999999999999999863 346788999999999999999984
Q ss_pred cc-cccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchhh
Q 039344 396 LS-PKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCF 474 (873)
Q Consensus 396 ~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 474 (873)
+| ..+..+++|+.|+|++|++++.+|..+. .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++++..|
T Consensus 419 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~----~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~ 493 (562)
T 3a79_B 419 AYDRTCAWAESILVLNLSSNMLTGSVFRCLP----PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVF 493 (562)
T ss_dssp CSSCCCCCCTTCCEEECCSSCCCGGGGSSCC----TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTST
T ss_pred cChhhhcCcccCCEEECCCCCCCcchhhhhc----CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHH
Confidence 44 4688999999999999999988887775 38999999999999 466666799999999999999997655559
Q ss_pred hccCCCcEEecCCCcccccCCC
Q 039344 475 EKMNGLLHIDISYNELRGSIPN 496 (873)
Q Consensus 475 ~~~~~L~~l~ls~N~l~~~~p~ 496 (873)
..+++|+.|++++|+|.+..|-
T Consensus 494 ~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 494 DRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TTCTTCCCEECCSCCBCCCHHH
T ss_pred hcCCCCCEEEecCCCcCCCcch
Confidence 9999999999999999987654
No 38
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-45 Score=400.29 Aligned_cols=260 Identities=22% Similarity=0.335 Sum_probs=200.8
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec------c
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV------R 674 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 674 (873)
++|++.+.||+|+||+||+|+. .+|+.||||+++..... ....+.+.+|+++|+.++|||||++++++... +
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 5799999999999999999976 47999999999765332 23356788999999999999999999998643 5
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
..|+||||++ |+|.+++... +.+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 6899999997 6788888653 4599999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC----CCCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh------
Q 039344 755 KFLKPD----SSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA------ 823 (873)
Q Consensus 755 ~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~------ 823 (873)
+.+... .....+.+||+.|||||++.+. .++.++||||+||++|||++|+.||................
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 876432 2234567899999999998875 46899999999999999999999997543221111110000
Q ss_pred ------------hhhhcCCCCCCCCch-hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 824 ------------LDEMLDPRLPTPSRN-VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 824 ------------~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
......+..+.+... .......+.+++.+||+.||++|||++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000011111111000 0011235789999999999999999999875
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3e-45 Score=427.38 Aligned_cols=451 Identities=21% Similarity=0.206 Sum_probs=372.4
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG 83 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 83 (873)
+++|+|++ +|..+. ++|++|+|++|++++..|++|.++++|++|+|++|++++..|++|.++++|++|+|++|+++
T Consensus 38 ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~- 113 (562)
T 3a79_B 38 YSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ- 113 (562)
T ss_dssp CTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-
T ss_pred cCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-
Confidence 46788886 777775 89999999999999888899999999999999999999988999999999999999999999
Q ss_pred CCCcccccccccceeeccccccCCC-CCccccCCcccCcccccccccccccCccccCCCCC--cEEEccCCCC--ccccc
Q 039344 84 SIPPSLGNLSNLATLYLDTNSLSNS-IPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNL--ATLYIYSNSL--SASIL 158 (873)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~ 158 (873)
.+|.. .+++|++|+|++|++++. .|..|.++++|++|++++|.+++. .+..+++| ++|++++|.+ ++..+
T Consensus 114 ~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~ 188 (562)
T 3a79_B 114 NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGET 188 (562)
T ss_dssp EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSC
T ss_pred ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCc
Confidence 56655 899999999999999963 468999999999999999999853 45666666 9999999999 77778
Q ss_pred cccCCCC-CCCEEEccCCcCccCCCc-cccCCCCCcEEeccCCCCc----ccCCccccCCCCCCEEEccCcccCCCc---
Q 039344 159 GKIGNLK-SLSNLQLSENNFNGSIPP-SLGNLSNLATLYLDTNSLS----YSIPSELGNLRSLSNLSLGYNKLSGSI--- 229 (873)
Q Consensus 159 ~~~~~l~-~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~--- 229 (873)
..+..+. ..-.++++.|.+.+..+. .+..+++|+.|++++|... ......+..+++|+.|+++++.+.+..
T Consensus 189 ~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~ 268 (562)
T 3a79_B 189 ESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVK 268 (562)
T ss_dssp CEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHH
T ss_pred ccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHH
Confidence 8877765 122678899998875554 5667899999999999632 012345788899999999988876321
Q ss_pred -ccccCCCCCccEEecccccCCCCCchhh-----cCCCCCcEEEccCCcCcCcCCcCC---CCCCCCeEEccCccccccc
Q 039344 230 -PISMGNLSNLTYLNLFENSLSGAIPYEY-----RNLVKLTILLLGHNQFRGPIPILR---NLTSLERVRLDRNYLTGNI 300 (873)
Q Consensus 230 -~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~l~---~l~~L~~L~L~~n~l~~~~ 300 (873)
+..+ ..++|++|++++|.+++..|..+ ..+++|+.++++.|.+..+...+. ...+|++|++++|.+....
T Consensus 269 ~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~ 347 (562)
T 3a79_B 269 LFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV 347 (562)
T ss_dssp HHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC
T ss_pred HHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc
Confidence 1111 23599999999999998888776 777777777887777721111121 2267999999999987543
Q ss_pred ccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCcc--CCccccCCCCCCEEeccCCccCCCCCc-ccc
Q 039344 301 SESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGN--VPPEIGHSSQLGVLDLSSNHIVGEIPI-ELG 377 (873)
Q Consensus 301 ~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~--~~~~~~~~~~L~~L~Ls~N~i~~~~~~-~~~ 377 (873)
. ...+++|++|++++|.+++..+..+..+++|+.|++++|++++. +|..++.+++|++|+|++|.+++.+|. .+.
T Consensus 348 ~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 425 (562)
T 3a79_B 348 C--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCA 425 (562)
T ss_dssp C--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCC
T ss_pred C--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhc
Confidence 2 26789999999999999998999999999999999999999863 346789999999999999999985665 588
Q ss_pred ccccccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccc
Q 039344 378 KLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLE 457 (873)
Q Consensus 378 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 457 (873)
.+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+. +|++|+|++|++++..+..+..+++|+
T Consensus 426 ~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~--~L~~L~L~~N~l~~l~~~~~~~l~~L~ 500 (562)
T 3a79_B 426 WAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQ--ALQELNVASNQLKSVPDGVFDRLTSLQ 500 (562)
T ss_dssp CCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSC--CCSEEECCSSCCCCCCTTSTTTCTTCC
T ss_pred CcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCC--CCCEEECCCCCCCCCCHHHHhcCCCCC
Confidence 899999999999999887766554 78999999999998 7888777665 999999999999965555599999999
Q ss_pred eecccCccccCCCc
Q 039344 458 KLNLSHNSLSGLIP 471 (873)
Q Consensus 458 ~L~L~~N~l~~~~~ 471 (873)
.|++++|++++..+
T Consensus 501 ~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 501 YIWLHDNPWDCTCP 514 (562)
T ss_dssp CEECCSCCBCCCHH
T ss_pred EEEecCCCcCCCcc
Confidence 99999999997655
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.7e-44 Score=390.04 Aligned_cols=198 Identities=27% Similarity=0.353 Sum_probs=171.0
Q ss_pred HHHhcCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEe
Q 039344 598 IRATNDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLH 672 (873)
Q Consensus 598 ~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 672 (873)
....+.|++.+.||+|+||+||+|+.+ +++.||+|++.... ....+.+|+++++.+ +|||||++++++.+
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 345678999999999999999999753 57889999986431 135688999999998 69999999999999
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC-CCeEEecc
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE-NEAHVSDF 751 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~-~~~kl~Df 751 (873)
.+..|+||||+++|+|.+++. .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred CCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence 999999999999999999883 388999999999999999999999 99999999999999877 79999999
Q ss_pred ccccccCCCCC----------------------------CccccccccccccccccccC-CCCCcchhHHHHHHHHHHHh
Q 039344 752 GIAKFLKPDSS----------------------------NWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIK 802 (873)
Q Consensus 752 g~a~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~t 802 (873)
|+|+....... ...+.+||+.|+|||++.+. .++.++||||+||++|||+|
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~ 242 (361)
T 4f9c_A 163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242 (361)
T ss_dssp TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH
Confidence 99986543221 12345799999999998875 48999999999999999999
Q ss_pred CCCCCcc
Q 039344 803 GKHPRDF 809 (873)
Q Consensus 803 g~~P~~~ 809 (873)
|+.||..
T Consensus 243 G~~Pf~~ 249 (361)
T 4f9c_A 243 GRYPFYK 249 (361)
T ss_dssp TCSSSSC
T ss_pred CCCCCCC
Confidence 9999853
No 41
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.2e-43 Score=416.97 Aligned_cols=455 Identities=20% Similarity=0.186 Sum_probs=382.2
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG 83 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 83 (873)
+++|+|+...|.+|.++++|++|+|++|+|+++.|++|.++++|++|+|++|+|++..+++|.++++|++|+|++|++++
T Consensus 59 Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~ 138 (635)
T 4g8a_A 59 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 138 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCC
T ss_pred eeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCC
Confidence 47899999999999999999999999999998889999999999999999999998888899999999999999999998
Q ss_pred CCCcccccccccceeeccccccCCC-CCccccCCcccCcccccccccccccCccccCCCCCc----EEEccCCCCccccc
Q 039344 84 SIPPSLGNLSNLATLYLDTNSLSNS-IPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLA----TLYIYSNSLSASIL 158 (873)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~n~l~~~~~ 158 (873)
+.+.+|+++++|++|+|++|+++.. .|..+..+++|++|++++|++++..+..|..+.+++ .++++.|.+..+.+
T Consensus 139 l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~ 218 (635)
T 4g8a_A 139 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 218 (635)
T ss_dssp STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECT
T ss_pred CChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCc
Confidence 8888999999999999999999863 578899999999999999999988888887766544 68889998877665
Q ss_pred cccCCCCCCCEEEccCCcCcc----------------------------------------------------------C
Q 039344 159 GKIGNLKSLSNLQLSENNFNG----------------------------------------------------------S 180 (873)
Q Consensus 159 ~~~~~l~~L~~L~L~~n~i~~----------------------------------------------------------~ 180 (873)
..+..+ .++.+++++|.... .
T Consensus 219 ~~~~~~-~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 297 (635)
T 4g8a_A 219 GAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDG 297 (635)
T ss_dssp TTTTTC-EEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEE
T ss_pred ccccch-hhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccc
Confidence 554332 34445554442210 0
Q ss_pred CCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCC
Q 039344 181 IPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNL 260 (873)
Q Consensus 181 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 260 (873)
....+..+.+++.+.+.++.+... ..+.....|+.|++.+|.+....+ ..+..|+.+++..|.+... ..+..+
T Consensus 298 ~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l 370 (635)
T 4g8a_A 298 IIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDL 370 (635)
T ss_dssp CTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBC
T ss_pred hhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccc
Confidence 111233345677777777776632 346677899999999999985543 3567899999999988643 345678
Q ss_pred CCCcEEEccCCcCcCc---CCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccC-CCCCCCCCCCCe
Q 039344 261 VKLTILLLGHNQFRGP---IPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEI-SSDWGRCPKLST 336 (873)
Q Consensus 261 ~~L~~L~L~~N~l~~~---~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~ 336 (873)
++|+.|++++|.+... ...+..+.+|+.+++..|.+.... ..+..+++|+.+++++|+..... ...|..+++++.
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~-~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~ 449 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMS-SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEEC-SCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhcccccccccc-ccccccccccchhhhhcccccccccccccccccccc
Confidence 9999999999998752 224567889999999999987654 45778999999999999887654 456788999999
Q ss_pred eeeccccCCccCCccccCCCCCCEEeccCCccC-CCCCccccccccccEEEecCccccCCcccccccccccccccccccc
Q 039344 337 LDFSINNITGNVPPEIGHSSQLGVLDLSSNHIV-GEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNR 415 (873)
Q Consensus 337 L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 415 (873)
++++.|.+....+..+..++.|+.|+|++|.+. +..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+
T Consensus 450 l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~ 529 (635)
T 4g8a_A 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 529 (635)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCc
Confidence 999999999888999999999999999999854 4578889999999999999999999889999999999999999999
Q ss_pred cccccCCCcCchhhhhhhcccccCCccCcccchhhhhh-cccceecccCccccCC
Q 039344 416 LSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIM-QSLEKLNLSHNSLSGL 469 (873)
Q Consensus 416 l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~ 469 (873)
|++..|..|.++. +|+.|||++|+|++..|..+..+ ++|+.|+|++|+++..
T Consensus 530 l~~l~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 530 FFSLDTFPYKCLN--SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCBCCCGGGTTCT--TCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCCChhHHhCCC--CCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9988888888876 99999999999999999999988 6899999999999864
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.5e-44 Score=406.42 Aligned_cols=251 Identities=22% Similarity=0.222 Sum_probs=199.1
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHH---HHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFL---NEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~---~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
++|++.++||+|+||+||+|+.+ +|+.||+|++.+...........+. .++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999764 7999999998643211111122333 3456667778999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||++||+|.+++... +.+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+
T Consensus 269 lVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 999999999999999653 4599999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 758 KPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 758 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
... ...+.+||+.|||||++.+ ..|+.++|+||+||++|||++|+.||......... .............+.
T Consensus 343 ~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-----~i~~~i~~~~~~~p~ 415 (689)
T 3v5w_A 343 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----EIDRMTLTMAVELPD 415 (689)
T ss_dssp SSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-----HHHHHHHHCCCCCCT
T ss_pred CCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHHhhcCCCCCCCc
Confidence 543 2345789999999999974 57999999999999999999999999753322111 111122222222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPT-----MQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~ 869 (873)
.. ...+.+++.+||+.||++|++ ++||++
T Consensus 416 ~~----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 416 SF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TS----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred cC----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 22 224789999999999999998 677754
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.2e-43 Score=406.49 Aligned_cols=251 Identities=19% Similarity=0.293 Sum_probs=209.3
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||+||+|+. .+|+.||+|++.... ....+.+.+|+.+|+.++|||||++++++.+.+..|+||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 6799999999999999999976 479999999987532 233567889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC--CCeEEeccccccccC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE--NEAHVSDFGIAKFLK 758 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~--~~~kl~Dfg~a~~~~ 758 (873)
||+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 234 E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 234 EFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp ECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred eecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999986432 3589999999999999999999999 99999999999999854 899999999999876
Q ss_pred CCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 759 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+.......+...
T Consensus 309 ~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~ 379 (573)
T 3uto_A 309 PK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDWNMDDSA 379 (573)
T ss_dssp TT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCCCCCSGG
T ss_pred CC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCCCCCCccc
Confidence 43 3445678999999999999999999999999999999999999998754332 12222222222222222
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.......+.+|+.+||+.||++|||++|+++
T Consensus 380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2222345789999999999999999999986
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.8e-42 Score=392.19 Aligned_cols=392 Identities=22% Similarity=0.251 Sum_probs=249.0
Q ss_pred CEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccccccccccc-CccccCCCCCcEEEccC
Q 039344 72 SDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSI-PHSLGNLTNLATLYIYS 150 (873)
Q Consensus 72 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~ 150 (873)
+.++.+++.++ .+|. +. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45666666666 4444 22 56666666666666555666666666666666666665333 44566666666666666
Q ss_pred CCCccccccccCCCCCCCEEEccCCcCccCCCcc--ccCCCCCcEEeccCCCCcccCCcc-ccCCCCCCEEEccCcccCC
Q 039344 151 NSLSASILGKIGNLKSLSNLQLSENNFNGSIPPS--LGNLSNLATLYLDTNSLSYSIPSE-LGNLRSLSNLSLGYNKLSG 227 (873)
Q Consensus 151 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~ 227 (873)
|+++++.+..|.++++|++|+|++|++++..+.. |..+++|++|+|++|.+++..|.. +..+++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 6666555556666666666666666665432222 555555555555555555444443 4555555555555555555
Q ss_pred CcccccCCC--CCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccc
Q 039344 228 SIPISMGNL--SNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFY 305 (873)
Q Consensus 228 ~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 305 (873)
..+..+..+ .+|+.|++++|.+.+..+..+.. .....+..+++|++|++++|.+++..+..+.
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~---------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 233 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW---------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFF 233 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH---------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc---------------cccccccccceeeeEecCCCcccccchhhhh
Confidence 444444443 34455555555544332221110 0011233456777777777777766555554
Q ss_pred cC---CCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccC--CCCCCEEeccCCccCCCCCccccccc
Q 039344 306 IY---PNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGH--SSQLGVLDLSSNHIVGEIPIELGKLN 380 (873)
Q Consensus 306 ~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~--~~~L~~L~Ls~N~i~~~~~~~~~~l~ 380 (873)
.. ++|+.|++++|.+.+... ..+.+.+..+..+.. .++|+.|++++|.+++..|..+..++
T Consensus 234 ~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 299 (455)
T 3v47_A 234 DAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFT 299 (455)
T ss_dssp HHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCT
T ss_pred ccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCC
Confidence 43 678888888776653211 111222122222222 35677777777777777777777777
Q ss_pred cccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceec
Q 039344 381 FFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLN 460 (873)
Q Consensus 381 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 460 (873)
+|++|++++|++++..+..+..+++|+.|+|++|++++..|..+..+. +|++|+|++|++++..|..+..+++|++|+
T Consensus 300 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 300 DLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLD--KLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCT--TCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcc--cCCEEECCCCcccccChhhccccccccEEE
Confidence 777777777777776777777788888888888888776677777665 788888888888887788888888999999
Q ss_pred ccCccccCCCchhhhccCCCcEEecCCCcccccCCCCC
Q 039344 461 LSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNST 498 (873)
Q Consensus 461 L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~~ 498 (873)
|++|+|++.++..|..+++|++|++++|++++..|...
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 99999998888888889999999999999998888644
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.3e-42 Score=384.27 Aligned_cols=413 Identities=25% Similarity=0.310 Sum_probs=248.3
Q ss_pred CccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCC-------------CEEEcccCC
Q 039344 14 PSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFF-------------SDLELSNNK 80 (873)
Q Consensus 14 p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~ 80 (873)
|..+ ..+.|++|++++|++ +.+|++|+++++|++|++++|++++.+|..++.+.+| ++|++++|.
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 4444 358899999999999 6899999999999999999999999999999998875 888888888
Q ss_pred CCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccc
Q 039344 81 LSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGK 160 (873)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 160 (873)
+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|.+++ ++.. .++|++|++++|++++++ .
T Consensus 83 l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~lp--~ 148 (454)
T 1jl5_A 83 LSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEKLP--E 148 (454)
T ss_dssp CSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSSCC--C
T ss_pred ccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCCCc--c
Confidence 885 4432 3678888888888885 5543 3788888888888874 3321 168888888888888743 5
Q ss_pred cCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCcc
Q 039344 161 IGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLT 240 (873)
Q Consensus 161 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 240 (873)
|+.+++|++|++++|++++ +|..+ .+|++|++++|.+++ +| .++++++|++|++++|++++ .|.. .++|+
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~ 218 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLE 218 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCC
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCccc
Confidence 8888888888888888885 44433 478888888888885 45 58888888888888888875 3332 25788
Q ss_pred EEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccc
Q 039344 241 YLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNF 320 (873)
Q Consensus 241 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l 320 (873)
+|++++|.++ ..| .+..+++|++|++++|++.+.+.. +++|+.|++++|.+++++.. .++|++|++++|++
T Consensus 219 ~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~l~~~----~~~L~~L~ls~N~l 289 (454)
T 1jl5_A 219 SIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTDLPEL----PQSLTFLDVSENIF 289 (454)
T ss_dssp EEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCC
T ss_pred EEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccccCcc----cCcCCEEECcCCcc
Confidence 8888888888 445 377888888888888888764432 36788888888888865432 37788888888888
Q ss_pred cccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCccccc
Q 039344 321 YGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKL 400 (873)
Q Consensus 321 ~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 400 (873)
++.. . -.++|+.|++++|++++. +. ..++|++|++++|++++ +|.. +++|+.|++++|+++. +|.
T Consensus 290 ~~l~-~---~~~~L~~L~l~~N~l~~i-~~---~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~-- 354 (454)
T 1jl5_A 290 SGLS-E---LPPNLYYLNASSNEIRSL-CD---LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE-- 354 (454)
T ss_dssp SEES-C---CCTTCCEEECCSSCCSEE-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC--
T ss_pred Cccc-C---cCCcCCEEECcCCcCCcc-cC---CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc--
Confidence 7522 1 125788888888887742 21 12478888888888874 5543 4677888888888874 444
Q ss_pred cccccccccccccccccc--ccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccC--CCchhhhc
Q 039344 401 GSLVQLEHLDLSSNRLSN--SIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSG--LIPSCFEK 476 (873)
Q Consensus 401 ~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~ 476 (873)
.+++|+.|+|++|++++ .+|.++..+ +.|.+.+.+|.. +++|+.|++++|++++ .+|.
T Consensus 355 -~l~~L~~L~L~~N~l~~l~~ip~~l~~L----------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~---- 416 (454)
T 1jl5_A 355 -LPQNLKQLHVEYNPLREFPDIPESVEDL----------RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE---- 416 (454)
T ss_dssp -CCTTCCEEECCSSCCSSCCCCCTTCCEE----------ECCC-------------------------------------
T ss_pred -hhhhccEEECCCCCCCcCCCChHHHHhh----------hhcccccccccc---cCcCCEEECCCCcCCccccchh----
Confidence 46778888888888876 566665533 345555555542 4678888888888876 4444
Q ss_pred cCCCcEEecCCCcccccCCC
Q 039344 477 MNGLLHIDISYNELRGSIPN 496 (873)
Q Consensus 477 ~~~L~~l~ls~N~l~~~~p~ 496 (873)
.++.|.+.+|.+.+++|.
T Consensus 417 --sl~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 417 --SVEDLRMNSERVVDPYEF 434 (454)
T ss_dssp --------------------
T ss_pred --hHhheeCcCcccCCcccc
Confidence 345566777777665543
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.4e-42 Score=389.18 Aligned_cols=389 Identities=19% Similarity=0.164 Sum_probs=226.7
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCC-CCCcccccccccceeeccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSG-SIPPSLGNLSNLATLYLDT 102 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~ 102 (873)
+.++.++++++ .+|. +. ++|++|+|++|++++..|..|.++++|++|+|++|.+.+ +.+.+|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45667777776 4554 22 667777777777776667777777777777777776653 3355666677777777777
Q ss_pred cccCCCCCccccCCcccCcccccccccccccCcc--ccCCCCCcEEEccCCCCccccccc-cCCCCCCCEEEccCCcCcc
Q 039344 103 NSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHS--LGNLTNLATLYIYSNSLSASILGK-IGNLKSLSNLQLSENNFNG 179 (873)
Q Consensus 103 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~i~~ 179 (873)
|++++..|..|.++++|++|+|++|.+++..+.. |..+++|++|+|++|++.++.+.. |..+++|++|++++|.+++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 7766555666666666666666666666433333 666666666666666665554443 5556666666666666655
Q ss_pred CCCccccCC--CCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhh
Q 039344 180 SIPPSLGNL--SNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEY 257 (873)
Q Consensus 180 ~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 257 (873)
..+..+..+ .+|+.|++++|.+....+..++. .....+..+++|++|++++|++++..+..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 555555443 34555555555554322221110 000112244566666666666665555555
Q ss_pred cCC---CCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCccccccccccccc--CCCccEEeccCccccccCCCCCCCCC
Q 039344 258 RNL---VKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYI--YPNLTYIDLSQNNFYGEISSDWGRCP 332 (873)
Q Consensus 258 ~~l---~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~--~~~L~~L~Ls~N~l~~~~~~~~~~l~ 332 (873)
... .+|+.|++++|.+.+....... +.......+.. .++|++|++++|.+.+..+..+..++
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 299 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSSFGHTN-------------FKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFT 299 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCCTTCCS-------------SCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCT
T ss_pred hccccccceeeEeeccccccccccchhh-------------hccCcccccccccccCceEEEecCccccccchhhcccCC
Confidence 443 5666666666655442111111 11111111211 24566666666666666666666666
Q ss_pred CCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCccccccccccccccccc
Q 039344 333 KLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLS 412 (873)
Q Consensus 333 ~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 412 (873)
+|+.|++++|++++..|..|+.+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..+..+++|+.|+|+
T Consensus 300 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 379 (455)
T 3v47_A 300 DLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALD 379 (455)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECC
Confidence 66666666666666556666666666666666666665555666666666666666666666556666666666666666
Q ss_pred ccccccccCCCcCchhhhhhhcccccCCccCcccc
Q 039344 413 SNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIP 447 (873)
Q Consensus 413 ~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~ 447 (873)
+|+|++..+..+..+. +|++|+|++|++++..|
T Consensus 380 ~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 380 TNQLKSVPDGIFDRLT--SLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SSCCSCCCTTTTTTCT--TCCEEECCSSCBCCCTT
T ss_pred CCccccCCHhHhccCC--cccEEEccCCCcccCCC
Confidence 6666654444555544 66666666666665544
No 47
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.4e-42 Score=372.05 Aligned_cols=264 Identities=28% Similarity=0.397 Sum_probs=204.5
Q ss_pred HHHHHHHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec
Q 039344 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV 673 (873)
Q Consensus 594 ~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 673 (873)
..++.....+|++.+.||+|+||+||+|+.. |+.||||++..... .....+++.+|++++++++||||+++++++.+.
T Consensus 29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp ---CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred cccccCChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 3334445678999999999999999999874 88999999876433 233456799999999999999999999999999
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCC--eeeCCCCCCCeeeCCCCCeEEecc
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP--IVHRDISSKNVLLDFENEAHVSDF 751 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~~kl~Df 751 (873)
+..++||||+++++|.+++........+++..++.++.|++.|++|||++ + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999997765445589999999999999999999999 8 999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCC
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (873)
|+++.............||+.|+|||.+.+..++.++||||+||++|||++|+.||............ ......
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~------~~~~~~ 257 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV------GFKCKR 257 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH------HHSCCC
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HhcCCC
Confidence 99986655444445678999999999999999999999999999999999999998754322111110 011122
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...+... ...+.+++.+||+.||++|||++++++.|+
T Consensus 258 ~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 258 LEIPRNL----NPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2222211 224889999999999999999999999874
No 48
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2e-42 Score=374.87 Aligned_cols=280 Identities=31% Similarity=0.582 Sum_probs=226.8
Q ss_pred ccccCHHHHHHHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEe
Q 039344 589 EGKIIYEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYG 668 (873)
Q Consensus 589 ~~~~~~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 668 (873)
...+++.++....++|++.+.||+|+||.||+|+..+|+.||||++........ ...+.+|+++++.++||||+++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C--CCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH--HHHHHHHHHHHHhccCCCccceEE
Confidence 346778899999999999999999999999999988899999999976433222 236889999999999999999999
Q ss_pred EEEecceeEEEEEeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeE
Q 039344 669 FCLHVRHLFIVYEYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAH 747 (873)
Q Consensus 669 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~k 747 (873)
++.+.+..++||||+++++|.+++.... ....+++..+..++.|++.|++|||+++.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999997654 334589999999999999999999998777899999999999999999999
Q ss_pred EeccccccccCCCCCC-ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc--------hhhhh
Q 039344 748 VSDFGIAKFLKPDSSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM--------SFSSL 818 (873)
Q Consensus 748 l~Dfg~a~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~--------~~~~~ 818 (873)
|+|||+++........ .....||+.|+|||++.+..++.++||||+|+++|||++|+.||+..... .+...
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999999876544332 33456999999999999989999999999999999999999999632211 00000
Q ss_pred -hhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 819 -NLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 819 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
........+.+..... ....+....+.+++.+||+.||++|||++||++.|+
T Consensus 255 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp TTSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HhhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 0111122222322222 223455677999999999999999999999999985
No 49
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-41 Score=362.75 Aligned_cols=250 Identities=24% Similarity=0.429 Sum_probs=209.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|++.+.||+|+||+||+|+. .+|+.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH---HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 46799999999999999999985 578999999987543222 46789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999998643 488999999999999999999999 999999999999999999999999999988776
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||........... ......+....+..
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-----~~~~~~~~~~~~~~-- 241 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-----IATNGTPELQNPEK-- 241 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHHCSCCCSCGGG--
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHhCCCCCCCCccc--
Confidence 65556667899999999999999999999999999999999999999875433211111 11111122222211
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+.+++.+||+.||++|||++|+++
T Consensus 242 --~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 242 --LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 2234789999999999999999999976
No 50
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.5e-42 Score=371.92 Aligned_cols=272 Identities=30% Similarity=0.485 Sum_probs=221.3
Q ss_pred CHHHHHHHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe
Q 039344 593 IYEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672 (873)
Q Consensus 593 ~~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 672 (873)
.+.++..++++|++.+.||+|+||.||+|+.++|+.||||++..... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS---QGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS---SHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh---HHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 33445567789999999999999999999988899999999875422 235789999999999999999999999999
Q ss_pred cceeEEEEEeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecc
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDF 751 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Df 751 (873)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999999987544 233589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhh-------hhhh
Q 039344 752 GIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSL-------NLNI 822 (873)
Q Consensus 752 g~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~-------~~~~ 822 (873)
|+++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....+...... ....
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 99986543222 22345689999999999999999999999999999999999999875433211111 0111
Q ss_pred hhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
......++..... ...+....+.+++.+||+.||++|||++|+++.|+
T Consensus 264 ~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 264 QLEQIVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CCCSSSSSSCTTC--SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cHHHhcChhhccc--cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1223333333222 22455667999999999999999999999999885
No 51
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.5e-41 Score=362.47 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=214.3
Q ss_pred cccCHHHHHHHhcC----------CCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc
Q 039344 590 GKIIYEEIIRATND----------FDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI 658 (873)
Q Consensus 590 ~~~~~~e~~~~~~~----------~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l 658 (873)
+.++++++..+.+. |+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhC
Confidence 45677777777654 666789999999999999876 7999999998754322 246789999999999
Q ss_pred cCCceeeEEeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCe
Q 039344 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNV 738 (873)
Q Consensus 659 ~h~niv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 738 (873)
+||||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 999999999999999999999999999999999864 2489999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhh
Q 039344 739 LLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSL 818 (873)
Q Consensus 739 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~ 818 (873)
+++.++.+||+|||+++.............||+.|+|||++.+..++.++||||+|+++|||++|+.||.........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-- 250 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-- 250 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--
Confidence 999999999999999987765544555678999999999999999999999999999999999999998754322111
Q ss_pred hhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 819 NLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
........+...... .....+.+++.+||+.||++|||++|+++
T Consensus 251 ---~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 ---KRLRDSPPPKLKNSH----KVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHHHHSSCCCCTTGG----GSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHhcCCCCCcCccc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111122222111 12234889999999999999999999986
No 52
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-41 Score=366.03 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=208.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|++.+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 46799999999999999999986 58999999998754322 23456788999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp ECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999998653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCCC-CcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
. .......||+.|+|||++.+..+. .++||||+||++|||++|+.||+...... ....+..+....+...
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~~~~p~~~ 237 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--------LRERVLRGKYRIPFYM 237 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCTTS
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCCCCCCC
Confidence 3 344567899999999999888765 78999999999999999999987543221 1222222333333222
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||.+|||++|+++
T Consensus 238 ----s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 238 ----STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ----CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 224789999999999999999999975
No 53
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.1e-41 Score=366.10 Aligned_cols=250 Identities=23% Similarity=0.295 Sum_probs=207.6
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||+||+|+.+ +|+.||+|++++.........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 67899999999999999999865 69999999986532112223567889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 999999999988643 3589999999999999999999999 9999999999999999999999999999875555
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.......+...
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~~~~p~~~-- 228 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--------LFELILMEEIRFPRTL-- 228 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCTTS--
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCCCCCCCC--
Confidence 555566789999999999999999999999999999999999999987533221 1112222222222221
Q ss_pred HHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 039344 841 DKLISIVEVTISCVDENPESRP-----TMQKVCQ 869 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~ 869 (873)
...+.+++.+||+.||++|| +++|+++
T Consensus 229 --s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 229 --SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp --CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 22478999999999999999 8999875
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=359.94 Aligned_cols=254 Identities=28% Similarity=0.473 Sum_probs=207.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|.+.+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 367888999999999999999864 6899999988542 334467899999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 9999999999999653 24589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCc--------------cccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhh-hhhhhhhh
Q 039344 760 DSSNW--------------TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFS-SLNLNIAL 824 (873)
Q Consensus 760 ~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~-~~~~~~~~ 824 (873)
..... ....||+.|+|||++.+..++.++||||+|+++|||++|..||......... ........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence 32211 1457999999999999999999999999999999999999998653322111 11111112
Q ss_pred hhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 825 DEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.....+..+ ..+.+++.+||+.||++|||++++++.|+
T Consensus 241 ~~~~~~~~~----------~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 241 DRYCPPNCP----------PSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHTCCTTCC----------TTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCCC----------HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 222122221 13789999999999999999999999875
No 55
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.6e-40 Score=374.15 Aligned_cols=404 Identities=26% Similarity=0.322 Sum_probs=281.4
Q ss_pred ccCCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCC-------------ceEEccCCcccccCCCCccCCCC
Q 039344 4 IYNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNL-------------ATLYIHTNSLSGSIPGEIGNFRF 70 (873)
Q Consensus 4 ~~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~p~~~~~l~~ 70 (873)
+++|++ +.+|.+|+++++|++|++++|++++.+|.+++.+++| ++|++++|+++ .+|.. .++
T Consensus 18 l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~~---~~~ 92 (454)
T 1jl5_A 18 RHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPEL---PPH 92 (454)
T ss_dssp -----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCSC---CTT
T ss_pred cccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCCC---cCC
Confidence 357888 8999999999999999999999999999999999875 99999999999 45552 378
Q ss_pred CCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccC
Q 039344 71 FSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYS 150 (873)
Q Consensus 71 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 150 (873)
|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|.+++ +| .|+.+++|++|++++
T Consensus 93 L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~ 162 (454)
T 1jl5_A 93 LESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDN 162 (454)
T ss_dssp CSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCC
Confidence 9999999999996 6644 3789999999999985 3332 2799999999999995 77 599999999999999
Q ss_pred CCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcc
Q 039344 151 NSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIP 230 (873)
Q Consensus 151 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 230 (873)
|++++++. . ..+|++|++++|++++ +| .++++++|++|++++|.+++ +|... ++|++|++++|+++ .+|
T Consensus 163 N~l~~lp~-~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 163 NSLKKLPD-L---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp SCCSCCCC-C---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC
T ss_pred CcCcccCC-C---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc
Confidence 99987432 2 3599999999999996 45 69999999999999999995 44432 58999999999999 566
Q ss_pred cccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCc
Q 039344 231 ISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNL 310 (873)
Q Consensus 231 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L 310 (873)
.+..+++|++|++++|++++. |. .+++|+.|++++|++.+.+.. .++|++|++++|.++++.. ..++|
T Consensus 232 -~~~~l~~L~~L~l~~N~l~~l-~~---~~~~L~~L~l~~N~l~~l~~~---~~~L~~L~ls~N~l~~l~~----~~~~L 299 (454)
T 1jl5_A 232 -ELQNLPFLTTIYADNNLLKTL-PD---LPPSLEALNVRDNYLTDLPEL---PQSLTFLDVSENIFSGLSE----LPPNL 299 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCSSC-CS---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSEESC----CCTTC
T ss_pred -ccCCCCCCCEEECCCCcCCcc-cc---cccccCEEECCCCcccccCcc---cCcCCEEECcCCccCcccC----cCCcC
Confidence 489999999999999999864 33 248999999999999985443 4899999999999997542 13789
Q ss_pred cEEeccCccccccCCCCCCCC-CCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecC
Q 039344 311 TYIDLSQNNFYGEISSDWGRC-PKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAH 389 (873)
Q Consensus 311 ~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~ 389 (873)
++|++++|++++.. .+ ++|+.|++++|++++ +|.. +++|++|++++|.++ .+|. .+.+|+.|++++
T Consensus 300 ~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~ 366 (454)
T 1jl5_A 300 YYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEY 366 (454)
T ss_dssp CEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCS
T ss_pred CEEECcCCcCCccc-----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCC
Confidence 99999999998532 23 589999999999986 5554 589999999999998 5666 478999999999
Q ss_pred ccccC--CcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCc--ccchhhhhhcccceecccCcc
Q 039344 390 NQLSG--QLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLRE--AIPSQICIMQSLEKLNLSHNS 465 (873)
Q Consensus 390 N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~ 465 (873)
|++++ .+|..+.. |+.|.+.+.+|..+ .+|+.||+++|++++ .+| ++|+.|.+.+|.
T Consensus 367 N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~~-----~~L~~L~ls~N~l~~~~~iP------~sl~~L~~~~~~ 427 (454)
T 1jl5_A 367 NPLREFPDIPESVED--------LRMNSHLAEVPELP-----QNLKQLHVETNPLREFPDIP------ESVEDLRMNSER 427 (454)
T ss_dssp SCCSSCCCCCTTCCE--------EECCC----------------------------------------------------
T ss_pred CCCCcCCCChHHHHh--------hhhccccccccccc-----CcCCEEECCCCcCCccccch------hhHhheeCcCcc
Confidence 99998 56655543 34577777777643 378899999999987 444 357788899999
Q ss_pred ccCCCchhhhcc
Q 039344 466 LSGLIPSCFEKM 477 (873)
Q Consensus 466 l~~~~~~~~~~~ 477 (873)
+.+..|......
T Consensus 428 ~~~~~~~~~~~~ 439 (454)
T 1jl5_A 428 VVDPYEFAHETT 439 (454)
T ss_dssp ------------
T ss_pred cCCccccCHHHh
Confidence 988776654433
No 56
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=367.21 Aligned_cols=249 Identities=23% Similarity=0.363 Sum_probs=198.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||+||+|+. .+|+.||||++....... ..+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 57899999999999999999975 579999999987653322 235688999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++.++..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999998543 3589999999999999999999999 999999999999999999999999999986654
Q ss_pred CC-CCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 760 DS-SNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 760 ~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
.. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+...... ....+..+....+..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~~~~p~~ 232 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA--------LYKKIMRGKYDVPKW 232 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCCCCCTT
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHcCCCCCCCC
Confidence 32 23455689999999999988775 889999999999999999999987533221 122222223322222
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. ..+.+++.+||+.||++|||++|+++
T Consensus 233 ~s----~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 233 LS----PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC----HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11 23778999999999999999999986
No 57
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.9e-40 Score=354.62 Aligned_cols=276 Identities=30% Similarity=0.491 Sum_probs=225.9
Q ss_pred ccccCHHHHHHHhcCCCCC------ceeeecCCeEEEEEEeCCCcEEEEEEccCCCC-CcchhHHHHHHHHHHHHhccCC
Q 039344 589 EGKIIYEEIIRATNDFDDE------HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLP-GEMTFQQEFLNEVKALTEIWHR 661 (873)
Q Consensus 589 ~~~~~~~e~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~ 661 (873)
...+.+.++..++..|... +.||+|+||.||+|+. +++.||||++..... ......+.+.+|+.+++.++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3567889999999998877 8999999999999987 488999999875432 2233467899999999999999
Q ss_pred ceeeEEeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC
Q 039344 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD 741 (873)
Q Consensus 662 niv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~ 741 (873)
||+++++++.+.+..++||||+++++|.+++........+++..+..++.|++.|++|||++ +|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence 99999999999999999999999999999997655556799999999999999999999999 999999999999999
Q ss_pred CCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhh
Q 039344 742 FENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLN 819 (873)
Q Consensus 742 ~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~ 819 (873)
.++.+||+|||+++........ .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||+...........
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 9999999999999876543222 234578999999998765 5889999999999999999999999754432111111
Q ss_pred ------hhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 820 ------LNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 820 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
......+.+++.+.... ......+.+++.+||+.||++|||++++++.|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCSCCC---HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHhhhhhhhhhhhccccccccc---hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11123344454443332 344556899999999999999999999999875
No 58
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.2e-41 Score=370.68 Aligned_cols=255 Identities=22% Similarity=0.368 Sum_probs=208.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEe--------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL--------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCL 671 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 671 (873)
.++|++.+.||+|+||.||+|+. .++..||||+++.. ......+.+.+|+.+++.+ +||||++++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT--CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC--cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 46788999999999999999975 24567999999754 2333457799999999999 8999999999999
Q ss_pred ecceeEEEEEeccCCChhhHhccccc-------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCe
Q 039344 672 HVRHLFIVYEYFKMCSLAVILSNDAA-------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNV 738 (873)
Q Consensus 672 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 738 (873)
+.+..|+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999975432 23578999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchh
Q 039344 739 LLDFENEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSF 815 (873)
Q Consensus 739 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~ 815 (873)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||........
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~ 314 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999999987654332 2233457889999999999999999999999999999999 9999875432211
Q ss_pred hhhhhhhhhhhhcCCC-CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 816 SSLNLNIALDEMLDPR-LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 816 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ..+..+. ...+.. ....+.+++.+||+.||++||++.|+++.|+
T Consensus 315 ~--------~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 315 F--------KLLKEGHRMDKPAN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp H--------HHHHTTCCCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H--------HHHhcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 1111111 111111 1234889999999999999999999999875
No 59
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.7e-41 Score=370.52 Aligned_cols=254 Identities=23% Similarity=0.326 Sum_probs=204.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 678 (873)
.++|++.++||+|+||+||+|+.+ +++.||+|++++.........+.+.+|..++.++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999865 6889999999765433333345678899999887 89999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++|+|..++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 131 V~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999998653 4589999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhh-hhhhhhhhhhhcCCCCCCCCc
Q 039344 759 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFS-SLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 837 (873)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||+........ ..........+.......+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 4445556678999999999999999999999999999999999999999743321111 111111222233333333322
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTM 864 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~ 864 (873)
. ...+.+++.+||+.||++||++
T Consensus 285 ~----s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 L----SVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp S----CHHHHHHHHHHTCSCTTTSTTC
T ss_pred C----CHHHHHHHHHHhcCCHhHcCCC
Confidence 2 2247899999999999999985
No 60
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.6e-41 Score=365.51 Aligned_cols=254 Identities=20% Similarity=0.262 Sum_probs=209.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCc---chhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGE---MTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999865 68999999987643321 12357899999999999999999999999999999
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC----CeEEeccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFG 752 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg 752 (873)
++||||+++|+|.+++... ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 9999999999999999643 3589999999999999999999999 999999999999998877 79999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 753 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 753 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... .....+.....
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~i~~~~~ 235 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITAVSY 235 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCC
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCC
Confidence 99876543 3344567999999999999989999999999999999999999998753322 22223333333
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+..........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3222222222345889999999999999999999975
No 61
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.6e-41 Score=362.70 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=205.7
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 679 (873)
++|++.+.||+|+||.||+|+.+ +|+.||+|++...........+.+.+|..+++++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57899999999999999999865 6899999999865444444456788999999988 899999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++|+|.+++... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 9999999999998643 3589999999999999999999999 999999999999999999999999999987554
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhh-hhhhhhhhhhhcCCCCCCCCch
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFS-SLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..........+.......+...
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~ 242 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 242 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC
Confidence 444556678999999999999999999999999999999999999999753221100 0111111222222333222222
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTM 864 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~ 864 (873)
...+.+++.+||+.||++||++
T Consensus 243 ----s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 243 ----SVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CHHHHHHHHHHhcCCHhHCCCC
Confidence 2247899999999999999995
No 62
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6e-41 Score=357.03 Aligned_cols=258 Identities=25% Similarity=0.379 Sum_probs=205.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 367999999999999999999754 7899999998765555555567899999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999999998643 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCC-Cc
Q 039344 760 DSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP-SR 837 (873)
Q Consensus 760 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 837 (873)
... ......||+.|+|||.+.+..++.++||||+|+++|||+||+.||......... ...+ ....+.. ..
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-------~~~~-~~~~~~~~~~ 235 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-------IKHI-QDSVPNVTTD 235 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-------HHHH-SSCCCCHHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-------HHHh-hccCCCcchh
Confidence 322 233457899999999999999999999999999999999999998754322111 1111 1111110 00
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCC-CHHHHHHHhc
Q 039344 838 NVHDKLISIVEVTISCVDENPESRP-TMQKVCQLLK 872 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~ 872 (873)
...+....+.+++.+||+.||++|| +++++.+.|+
T Consensus 236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 0011223588999999999999998 8888888764
No 63
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=374.91 Aligned_cols=255 Identities=19% Similarity=0.241 Sum_probs=208.4
Q ss_pred HhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
..++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 356799999999999999999975 57899999998764322 2335678999999999999999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC---CCCCeEEecccccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD---FENEAHVSDFGIAK 755 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~---~~~~~kl~Dfg~a~ 755 (873)
||||+++|+|.+.+... ..+++..+..++.||+.|++|||++ +|+||||||+||+++ .++.+||+|||+++
T Consensus 88 v~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999988653 3589999999999999999999999 999999999999998 46789999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCC
Q 039344 756 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835 (873)
Q Consensus 756 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (873)
.............||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ...+..+....+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~--------~~~i~~~~~~~~ 233 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL--------YQQIKAGAYDFP 233 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------HHHHHHTCCCCC
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH--------HHHHHhCCCCCC
Confidence 877665555667899999999999999999999999999999999999999865432211 111222222111
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111122335889999999999999999999986
No 64
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=368.39 Aligned_cols=251 Identities=22% Similarity=0.337 Sum_probs=202.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 678 (873)
.++|++.+.||+|+||+||+|+.+ +|+.||+|+++..........+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999865 6899999998753222223356688999999988 79999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 102 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 99999999999998653 4589999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 759 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+...
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~p~~~ 247 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEVVYPTWL 247 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTTS
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCCCC
Confidence 4445555678999999999999989999999999999999999999998754322 22222333333333222
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCH------HHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTM------QKVCQ 869 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~------~ev~~ 869 (873)
. ..+.+++.+||+.||++||++ +|+++
T Consensus 248 ~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 248 H----EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp C----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred C----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1 247899999999999999998 66654
No 65
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.9e-41 Score=367.68 Aligned_cols=256 Identities=20% Similarity=0.250 Sum_probs=207.5
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCC--CCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPL--PGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
+.|++.+.||+|+||+||+|+.. +|+.||||++.... .......+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56999999999999999999764 78999999985321 1111125779999999999999999999999999999999
Q ss_pred EEEeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC---eEEeccccc
Q 039344 679 VYEYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIA 754 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~Dfg~a 754 (873)
||||+++++|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999988876543 334589999999999999999999999 9999999999999987654 999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCC
Q 039344 755 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834 (873)
Q Consensus 755 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (873)
+.............||+.|+|||++.+..++.++||||+||++|+|++|+.||..... .....+.......
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~~~~~~ 251 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIKGKYKM 251 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHHTCCCC
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHcCCCCC
Confidence 8876554445567899999999999999999999999999999999999999874321 1122222222222
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...........+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 21111122345889999999999999999999975
No 66
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-41 Score=360.41 Aligned_cols=251 Identities=20% Similarity=0.270 Sum_probs=208.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +|+.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 467999999999999999999765 6889999998643 22346788999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC--CCCeEEecccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF--ENEAHVSDFGIAKFL 757 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~--~~~~kl~Dfg~a~~~ 757 (873)
|||+++++|.+++.... ..+++.++..++.|++.|++|||++ +|+||||||+||+++. ++.+||+|||+++..
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999986432 3589999999999999999999999 9999999999999997 789999999999877
Q ss_pred CCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 758 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 758 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....+.......+..
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~ 225 (321)
T 1tki_A 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMNAEYTFDEE 225 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCCCHH
T ss_pred CCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHcCCCCCChh
Confidence 543 3345567999999999999888999999999999999999999998753322 1222222233322222
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
........+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22223345889999999999999999999986
No 67
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=355.81 Aligned_cols=264 Identities=19% Similarity=0.284 Sum_probs=209.9
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc--eeEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR--HLFI 678 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 678 (873)
++|.+.+.||+|+||+||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 57899999999999999999865 5899999998753222 22577889999999999999999999998765 7899
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee----CCCCCeEEeccccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL----DFENEAHVSDFGIA 754 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill----~~~~~~kl~Dfg~a 754 (873)
||||+++++|.+++........+++..++.++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999998766555699999999999999999999999 99999999999999 77788999999999
Q ss_pred cccCCCCCCccccccccccccccccc--------cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 755 KFLKPDSSNWTELAGTYGYVAPELAY--------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 755 ~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
+...... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...................
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred eecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 8775443 334567999999999886 5678999999999999999999999997433211111111111100
Q ss_pred h-----------------cCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHh
Q 039344 827 M-----------------LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871 (873)
Q Consensus 827 ~-----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 871 (873)
. ..+..+............+.+++.+||+.||++|||++|+++..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 0 00122222223345566789999999999999999999998754
No 68
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.7e-40 Score=356.38 Aligned_cols=262 Identities=20% Similarity=0.303 Sum_probs=202.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.++|++.+.||+|+||+||+|+..+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 367999999999999999999998899999999975432 2233567889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++ ++.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp ECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred cCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99985 7777765432 3589999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh-------------hhh
Q 039344 761 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA-------------LDE 826 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~-------------~~~ 826 (873)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||................ ...
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 555566788999999999876 568999999999999999999999997544321111110000 000
Q ss_pred hcCCCCCCCC--c---hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 827 MLDPRLPTPS--R---NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 827 ~~~~~~~~~~--~---~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+.+....... . ........+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000000 0 00011235789999999999999999999986
No 69
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=360.00 Aligned_cols=253 Identities=25% Similarity=0.431 Sum_probs=204.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
..+|++.+.||+|+||.||+|+.. .+..||||+++... .....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 356888999999999999999874 35569999997542 233457899999999999999999999999999999
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999986432 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-C
Q 039344 757 LKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-R 831 (873)
Q Consensus 757 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~ 831 (873)
........ ....+|+.|+|||++.+..++.++||||+||++|||++ |+.||........ ...+... .
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--------~~~~~~~~~ 272 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--------ISSVEEGYR 272 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--------HHHHHTTCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--------HHHHHcCCC
Confidence 75443221 22345778999999998999999999999999999999 9999865332211 1111111 1
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+.+.. ....+.+++.+||+.||++|||++++++.|+
T Consensus 273 ~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 273 LPAPMG----CPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCC----cCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 222211 1234889999999999999999999999885
No 70
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.5e-40 Score=363.93 Aligned_cols=253 Identities=20% Similarity=0.286 Sum_probs=207.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 467999999999999999999764 6899999999764332 23356789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC---CeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---EAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~~kl~Dfg~a~~ 756 (873)
|||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++ .+||+|||+++.
T Consensus 107 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp ECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999988643 3589999999999999999999999 999999999999998654 599999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||....... ....+.......+.
T Consensus 181 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--------~~~~i~~~~~~~~~ 251 (362)
T 2bdw_A 181 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------LYAQIKAGAYDYPS 251 (362)
T ss_dssp CTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCCCCCT
T ss_pred ecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhCCCCCCc
Confidence 6533 33445689999999999999899999999999999999999999987533221 11112222222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++||+++|+++
T Consensus 252 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 252 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111222345889999999999999999999875
No 71
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.5e-40 Score=354.10 Aligned_cols=257 Identities=25% Similarity=0.399 Sum_probs=199.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHh--ccCCceeeEEeEEEec----c
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTE--IWHRNIVKVYGFCLHV----R 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~ 674 (873)
.++|++.+.||+|+||+||+|+. +|+.||||++... ..+.+..|.+++.. ++||||+++++++.+. .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 46799999999999999999988 5899999998642 23566677777776 7999999999997653 4
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHH--------hCCCCCeeeCCCCCCCeeeCCCCCe
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH--------NDCFPPIVHRDISSKNVLLDFENEA 746 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlk~~Nill~~~~~~ 746 (873)
..++||||+++|+|.+++.. ..+++..++.++.|++.|++||| +. +|+||||||+||+++.++.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 58999999999999999954 34899999999999999999999 77 99999999999999999999
Q ss_pred EEeccccccccCCCCCC----ccccccccccccccccccC------CCCCcchhHHHHHHHHHHHhC----------CCC
Q 039344 747 HVSDFGIAKFLKPDSSN----WTELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHP 806 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDv~s~G~il~el~tg----------~~P 806 (873)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 99999999876544332 2234799999999998876 455799999999999999999 777
Q ss_pred Ccccccchhhhhhh-hhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 807 RDFISSMSFSSLNL-NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 807 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
|............. .........+..+.. .........+.+++.+||+.||++|||++|+++.|+
T Consensus 233 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 233 FYDVVPNDPSFEDMRKVVCVDQQRPNIPNR-WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCcchhhhhHHHhccCCCCCCChh-hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 65432211111111 111111111222211 112234567999999999999999999999999885
No 72
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=358.40 Aligned_cols=253 Identities=20% Similarity=0.272 Sum_probs=206.7
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCc---chhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGE---MTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
+.|.+.+.||+|+||.||+|+.. +|+.||+|++....... ....+.+.+|+.+++.++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56889999999999999999865 68999999987543221 123578999999999999999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC----CeEEecccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFGI 753 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg~ 753 (873)
+||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 999999999999998643 4589999999999999999999999 999999999999999887 799999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||....... ....+......
T Consensus 165 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~~~~~~~~ 235 (326)
T 2y0a_A 165 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--------TLANVSAVNYE 235 (326)
T ss_dssp CEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--------HHHHHHHTCCC
T ss_pred CeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHhcCCC
Confidence 98775432 3345679999999999998999999999999999999999999986433211 11111111111
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.+..........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111122335789999999999999999999986
No 73
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.2e-40 Score=348.05 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=207.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.++|++.+.||+|+||.||+|+..++..||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 467899999999999999999999888999999975422 2467899999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999986542 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 761 SSN-WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 761 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||+....... ...+...........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~ 229 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV--------VLKVSQGHRLYRPHL 229 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--------HHHHHTTCCCCCCTT
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH--------HHHHHcCCCCCCCCc
Confidence 221 223446678999999998889999999999999999999 9999875432211 111111111111111
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ...+.+++.+||+.||++|||++|+++.|+
T Consensus 230 ~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 230 A---SDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp S---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred C---hHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 124889999999999999999999999885
No 74
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-40 Score=349.92 Aligned_cols=252 Identities=23% Similarity=0.413 Sum_probs=207.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.++|++.+.||+|+||.||+|+..+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 367888999999999999999998899999999975422 2467999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999996533 3589999999999999999999999 9999999999999999999999999999866432
Q ss_pred CC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 761 SS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 761 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.. ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....+...........
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~ 231 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFRLYKPRL 231 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCCCCCCTT
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhcCccCCCCCc
Confidence 21 2223456788999999998999999999999999999999 999987533221 1111111111111111
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ...+.+++.+||+.||++||+++++++.|+
T Consensus 232 ~---~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 232 A---STHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp S---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C---CHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1 224889999999999999999999999875
No 75
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6.5e-41 Score=363.16 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=205.3
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEeccee
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 676 (873)
...++|.+.+.||+|+||.||+|+.+ +|+.||+|+++..........+.+..|..+++.+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 44578999999999999999999875 6899999998753211112246678899999887 899999999999999999
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
|+||||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.+|.+||+|||+++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999998643 3589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
............||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.......+.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~~~~p~ 239 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--------LFHSIRMDNPFYPR 239 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCT
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHhCCCCCCc
Confidence 5544445556789999999999999999999999999999999999999987533221 11111112222221
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHH-HHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQ-KVC 868 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~-ev~ 868 (873)
.. ...+.+++.+||+.||++||++. +++
T Consensus 240 ~~----s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 240 WL----EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TS----CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred cc----CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 22478999999999999999987 554
No 76
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.9e-41 Score=369.48 Aligned_cols=255 Identities=24% Similarity=0.408 Sum_probs=206.8
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
..++|.+.+.||+|+||.||+|+.. +++.||||+++... .....++|.+|+++++.++||||+++++++.+.+..++
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 3467889999999999999999876 78999999987542 22334678899999999999999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 190 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999999996432 3589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCc--cccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCC
Q 039344 759 PDSSNW--TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835 (873)
Q Consensus 759 ~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (873)
...... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||......... ..... ..+.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~-----~~~~~--~~~~~~~ 337 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-----EFVEK--GGRLPCP 337 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH-----HHHHT--TCCCCCC
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHc--CCCCCCC
Confidence 321111 12235778999999998899999999999999999998 99998754322111 11111 1122222
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.. . ...+.+++.+||+.||++|||++++++.|+
T Consensus 338 ~~-~---~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 338 EL-C---PDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp TT-C---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-C---CHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 21 1 224889999999999999999999999875
No 77
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.7e-41 Score=361.21 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=202.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|.+.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36799999999999999999986 57899999998643211112235788999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+ +|++.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 67888887543 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+...... ....+.......+...
T Consensus 161 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--------~~~~i~~~~~~~p~~~ 231 (336)
T 3h4j_B 161 G-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN--------LFKKVNSCVYVMPDFL 231 (336)
T ss_dssp S-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT--------CBCCCCSSCCCCCTTS
T ss_pred C-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCCCCCcccC
Confidence 3 33345679999999999988776 789999999999999999999987532211 1111112222222211
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||.+|||++|+++
T Consensus 232 ----s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 232 ----SPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ----CHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ----CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 224789999999999999999999975
No 78
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-40 Score=365.92 Aligned_cols=253 Identities=23% Similarity=0.438 Sum_probs=195.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
..+|++.+.||+|+||.||+|+.. ++..||||+++... .....++|.+|+.++++++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 357999999999999999999864 57789999997542 233457899999999999999999999999999999
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++++|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999996542 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-C
Q 039344 757 LKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-R 831 (873)
Q Consensus 757 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~ 831 (873)
........ ....+++.|+|||++.+..++.++|||||||++||+++ |+.||........ ...+... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~--------~~~i~~~~~ 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--------IKAVDEGYR 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH--------HHHHHTTEE
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCC
Confidence 65433221 12335678999999999999999999999999999998 9999864332211 1111111 1
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+.+.. ....+.+++.+||+.||++||++++|++.|+
T Consensus 269 ~~~~~~----~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 269 LPPPMD----CPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCCCTT----CBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcc----ccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 111111 1234889999999999999999999999874
No 79
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-40 Score=359.42 Aligned_cols=263 Identities=24% Similarity=0.332 Sum_probs=203.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc----ee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR----HL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 676 (873)
..+|++.+.||+|+||+||+|+.. ++.||||++... ......+.+|+.++++++||||+++++++.+.. ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 467999999999999999999887 899999998642 222345667888999999999999999998754 46
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC-------CCCeeeCCCCCCCeeeCCCCCeEEe
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC-------FPPIVHRDISSKNVLLDFENEAHVS 749 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-------~~~i~H~Dlk~~Nill~~~~~~kl~ 749 (873)
++||||+++|+|.+++... .+++..+..++.|++.|++|||+.. .++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999643 4899999999999999999999861 2389999999999999999999999
Q ss_pred ccccccccCCCCC--Ccccccccccccccccccc-----CCCCCcchhHHHHHHHHHHHhCCCCCcccccc---hhhhh-
Q 039344 750 DFGIAKFLKPDSS--NWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSM---SFSSL- 818 (873)
Q Consensus 750 Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~---~~~~~- 818 (873)
|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... .+...
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999987654332 2334679999999999886 34567899999999999999999999754321 11100
Q ss_pred ----hhhhhhhhhcCCCCCCC-Cc--hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 819 ----NLNIALDEMLDPRLPTP-SR--NVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 819 ----~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
................. .. ........+.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111111111111 11 11233456899999999999999999999999885
No 80
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-39 Score=365.86 Aligned_cols=356 Identities=30% Similarity=0.417 Sum_probs=259.5
Q ss_pred CcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCC
Q 039344 7 NSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIP 86 (873)
Q Consensus 7 n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 86 (873)
+++.+.++. ..++.++.|++++|+++ .+|. +..+++|++|+|++|++++..| +..+++|++|++++|.+++..+
T Consensus 34 ~~~~~~i~~--~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~ 107 (466)
T 1o6v_A 34 TNVTDTVSQ--TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP 107 (466)
T ss_dssp SSTTSEECH--HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG
T ss_pred cccccccCh--hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh
Confidence 334444442 34567889999999887 4554 7888999999999999885544 8888999999999998885544
Q ss_pred cccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCC
Q 039344 87 PSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKS 166 (873)
Q Consensus 87 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 166 (873)
+.++++|++|++++|++++. +. +.++++|++|++++|.+++ ++ .+..+++|++|+++ |.+.... .+..+++
T Consensus 108 --~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~ 178 (466)
T 1o6v_A 108 --LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTT 178 (466)
T ss_dssp --GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTT
T ss_pred --hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCC
Confidence 88889999999999988854 33 8888899999999998884 33 48888888888886 4554433 3788888
Q ss_pred CCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEeccc
Q 039344 167 LSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFE 246 (873)
Q Consensus 167 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 246 (873)
|++|++++|.+++. ..+..+++|++|++++|.+++..+ ++.+++|++|++++|++++. ..+..+++|++|++++
T Consensus 179 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 179 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 252 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCC
Confidence 88888888888754 347778888888888888875544 67788888888888888753 3567778888888888
Q ss_pred ccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCC
Q 039344 247 NSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISS 326 (873)
Q Consensus 247 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~ 326 (873)
|.+++..+ +..+++|+.|++++|++.+..+ +..+++|++|++++|.++++.+ +..+++|++|++++|++++..+
T Consensus 253 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 253 NQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-
T ss_pred Cccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-
Confidence 88876544 7777788888888887776444 6677777777777777776544 5666777777777777765444
Q ss_pred CCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccC
Q 039344 327 DWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSG 394 (873)
Q Consensus 327 ~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 394 (873)
+..+++|+.|++++|++++. ..++.+++|+.|++++|++++..| +..+++|+.|++++|.+++
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred -hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 55666777777777766643 456666667777777776665554 5666666666666666664
No 81
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=353.30 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=198.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCc-----------------------chhHHHHHHHHHHHH
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGE-----------------------MTFQQEFLNEVKALT 656 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~ 656 (873)
.++|++.+.||+|+||.||+|+. .+|+.||||++....... ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46799999999999999999976 468999999986542211 112356889999999
Q ss_pred hccCCceeeEEeEEEe--cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCC
Q 039344 657 EIWHRNIVKVYGFCLH--VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDIS 734 (873)
Q Consensus 657 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk 734 (873)
.++||||+++++++.+ .+..++||||++++++.+++.. ..+++..+..++.|++.||+|||++ +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999986 5688999999999999876532 3589999999999999999999999 99999999
Q ss_pred CCCeeeCCCCCeEEeccccccccCCCCCCccccccccccccccccccCC---CCCcchhHHHHHHHHHHHhCCCCCcccc
Q 039344 735 SKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFIS 811 (873)
Q Consensus 735 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~sDv~s~G~il~el~tg~~P~~~~~ 811 (873)
|+||+++.++.+||+|||+++.............||+.|+|||.+.+.. ++.++||||+||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999988765554455678999999999988765 3778999999999999999999987533
Q ss_pred cchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 812 SMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
......... .. ....+.... ....+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~----~~--~~~~~~~~~----~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 IMCLHSKIK----SQ--ALEFPDQPD----IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHH----HC--CCCCCSSSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHh----cc--cCCCCCccc----cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 221111100 00 111111111 1224889999999999999999999875
No 82
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.1e-39 Score=365.33 Aligned_cols=360 Identities=20% Similarity=0.231 Sum_probs=177.7
Q ss_pred CCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccc
Q 039344 13 IPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNL 92 (873)
Q Consensus 13 ~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 92 (873)
.+..++.+++|++|+|++|++++. | .|..+++|++|+|++|++++. | ++.+++|++|++++|++++. + ++++
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 334444455555555555555432 3 345555555555555555532 2 44444555555555554432 1 4444
Q ss_pred cccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEc
Q 039344 93 SNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQL 172 (873)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 172 (873)
++|++|++++|++++ +| +. .+++|++|++++|+++++ .++.+++|++|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~------------------------~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l 155 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VS------------------------QNPLLTYLNCARNTLTEI---DVSHNTQLTELDC 155 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CT------------------------TCTTCCEEECTTSCCSCC---CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec--CC------------------------CCCcCCEEECCCCcccee---ccccCCcCCEEEC
Confidence 444444444444443 22 44 444444444444444432 1344444444444
Q ss_pred cCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCC
Q 039344 173 SENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGA 252 (873)
Q Consensus 173 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 252 (873)
++|...+.+ .+..+++|++|++++|.+++ +| +..+++|++|++++|++++. .+..+++|++|++++|++++
T Consensus 156 ~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~- 226 (457)
T 3bz5_A 156 HLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE- 226 (457)
T ss_dssp TTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-
T ss_pred CCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-
Confidence 444322222 24444455555555555543 22 44455555555555555432 24445555555555555554
Q ss_pred CchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCC
Q 039344 253 IPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCP 332 (873)
Q Consensus 253 ~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 332 (873)
+| +..+++|+.|++++|++++.+ +..+++|+.|++++|. |+.|++++|.+.+.+| +..++
T Consensus 227 ip--~~~l~~L~~L~l~~N~l~~~~--~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 227 ID--VTPLTQLTYFDCSVNPLTELD--VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp CC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCT
T ss_pred cC--ccccCCCCEEEeeCCcCCCcC--HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccc
Confidence 22 445555555555555555432 3344555555554432 3445555665544444 34556
Q ss_pred CCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCccccccccccccccccc
Q 039344 333 KLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLS 412 (873)
Q Consensus 333 ~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 412 (873)
+|+.|++++|...+.+|. ...+|+.|++++| ++|++|++++|++++. + ++.+++|+.||++
T Consensus 287 ~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~ 347 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCV 347 (457)
T ss_dssp TCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECC
T ss_pred cCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECC
Confidence 666666666665544442 2344444444444 3566666666666652 2 5666666666666
Q ss_pred ccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCchh
Q 039344 413 SNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSC 473 (873)
Q Consensus 413 ~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 473 (873)
+|+|++ + ..|..|++++|.+.+. ..+..|+.+++++|+++|.+|..
T Consensus 348 ~N~l~~-----l-----~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 348 NAHIQD-----F-----SSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp SSCCCB-----C-----TTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred CCCCCC-----c-----cccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 666653 1 1445556666666543 23445555666666666555543
No 83
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-40 Score=355.05 Aligned_cols=247 Identities=23% Similarity=0.360 Sum_probs=204.9
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||.||+|+.. +|+.||+|+++..........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 67899999999999999999865 79999999986532212223567889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.+|.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp CCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 999999999998653 3589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+...
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~p~~~-- 226 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILNAELRFPPFF-- 226 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHCCCCCCTTS--
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCCCC--
Confidence 23467999999999999999999999999999999999999998643322 11222222222222221
Q ss_pred HHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 039344 841 DKLISIVEVTISCVDENPESRP-----TMQKVCQ 869 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~ 869 (873)
...+.+++.+|++.||++|| +++|+++
T Consensus 227 --~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 --NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 12478999999999999999 8888874
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.4e-40 Score=350.44 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=199.3
Q ss_pred cCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYE 681 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 681 (873)
++|++.+.||+|+||+||+|+..+|+.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 468899999999999999999888999999998754322 2224678899999999999999999999999999999999
Q ss_pred eccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCCC
Q 039344 682 YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDS 761 (873)
Q Consensus 682 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 761 (873)
|+++ ++.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9985 8888876432 4588999999999999999999999 99999999999999999999999999998776544
Q ss_pred CCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh----------hh--hhc
Q 039344 762 SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA----------LD--EML 828 (873)
Q Consensus 762 ~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~----------~~--~~~ 828 (873)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||................ .. ...
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 445556789999999998764 58999999999999999999999997543221111000000 00 000
Q ss_pred CCCCC----CCCc-hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 829 DPRLP----TPSR-NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 829 ~~~~~----~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
++... .+.. ........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11110 0000 00112234789999999999999999999986
No 85
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.4e-40 Score=359.98 Aligned_cols=252 Identities=21% Similarity=0.268 Sum_probs=206.7
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 677 (873)
..++|++.+.||+|+||.||+|+.+ +|+.||+|+++..........+.+..|..+++.+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3478999999999999999999876 5789999998753211222346788999999888 8999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||+++|+|.+++... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 999999999999998643 3589999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 758 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 758 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~p~~ 243 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEHNVAYPKS 243 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhCCCCCCCC
Confidence 54444555678999999999999999999999999999999999999998753322 1222222233322222
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPT-----MQKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~ 869 (873)
. ...+.+++.+||+.||++||+ ++++++
T Consensus 244 ~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 244 M----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp S----CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred C----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 2 224789999999999999995 566654
No 86
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.7e-40 Score=355.49 Aligned_cols=251 Identities=22% Similarity=0.309 Sum_probs=195.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEe----CCCcEEEEEEccCCCCC-cchhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL----ASGEIIAVKKFHSPLPG-EMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
.++|++.+.||+|+||.||+|+. .+|+.||+|+++..... .......+.+|+.+++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 47899999999764321 12234567899999999999999999999999999
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.|+||||+++++|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 99999999999999998643 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCC
Q 039344 756 FLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835 (873)
Q Consensus 756 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (873)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------~~~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--------TIDKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhCCCCCC
Confidence 65544444455689999999999999999999999999999999999999987543221 1122222222222
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRP-----TMQKVCQ 869 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~ 869 (873)
... ...+.+++.+||+.||++|| +++|+++
T Consensus 242 ~~~----~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 PYL----TQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp TTS----CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCC----CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 221 22478999999999999999 7778765
No 87
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.2e-40 Score=355.05 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=201.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||+||+|+.. +++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 367999999999999999999865 7899999998654222 2236688999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 84 LEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 9999999999998643 3489999999999999999999999 999999999999999999999999999986543
Q ss_pred CC--CCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC-CCC
Q 039344 760 DS--SNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL-PTP 835 (873)
Q Consensus 760 ~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 835 (873)
.. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||......... ......... ..+
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-------~~~~~~~~~~~~~ 230 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-------YSDWKEKKTYLNP 230 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH-------HHHHHTTCTTSTT
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH-------HHHHhcccccCCc
Confidence 22 22345679999999999987775 77899999999999999999999754322110 111111111 111
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. .....+.+++.+||+.||++|||++|+++
T Consensus 231 ~~---~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 WK---KIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp GG---GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cc---cCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11 12234789999999999999999999975
No 88
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=361.82 Aligned_cols=252 Identities=25% Similarity=0.364 Sum_probs=204.2
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67899999999999999999765 68899999986432222223567889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+.+|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.+|.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 999999999998653 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCcccccccccccccccccc---CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 761 SSNWTELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... .....+.......+..
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~-----~~~~~~~~~~~~~p~~ 242 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK-----EIVHTFETTVVTYPSA 242 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH-----HHHHHHHHCCCCCCTT
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH-----HHHHHHhhcccCCCCc
Confidence 34456789999999999874 45899999999999999999999999743322111 1111111122222222
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCC-HHHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPT-MQKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs-~~ev~~ 869 (873)
. ...+.+++.+||+.||++||+ ++++.+
T Consensus 243 ~----s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 243 W----SQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp S----CHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred C----CHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 2 224889999999999999998 677654
No 89
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.7e-40 Score=357.32 Aligned_cols=251 Identities=21% Similarity=0.381 Sum_probs=203.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc-----
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR----- 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 674 (873)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 357899999999999999999876 79999999997543 2234578999999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEeccCCChhhHhcccccccCCC
Q 039344 675 ----------------------------------------------------HLFIVYEYFKMCSLAVILSNDAAAKNLG 702 (873)
Q Consensus 675 ----------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~ 702 (873)
..++||||+++++|.+++.........+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 3799999999999999998766656677
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCCCC------------Cccccccc
Q 039344 703 WTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS------------NWTELAGT 770 (873)
Q Consensus 703 ~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~g~ 770 (873)
+..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....... ......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 788999999999999999999 999999999999999999999999999987765421 22345799
Q ss_pred cccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHH
Q 039344 771 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVT 850 (873)
Q Consensus 771 ~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 850 (873)
+.|+|||++.+..++.++||||+||++|||++|..|+... ............+ .........+.+++
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~~~~~li 306 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITDVRNLKFP---LLFTQKYPQEHMMV 306 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHHHHTTCCC---HHHHHHCHHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHHhhccCCC---cccccCChhHHHHH
Confidence 9999999999999999999999999999999998884311 1111112222222 11223344578999
Q ss_pred hhcccCCCCCCCCHHHHHH
Q 039344 851 ISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 851 ~~cl~~dP~~RPs~~ev~~ 869 (873)
.+||+.||++|||++|+++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHH
T ss_pred HHHccCCCCcCCCHHHHhh
Confidence 9999999999999999986
No 90
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.4e-40 Score=369.62 Aligned_cols=374 Identities=17% Similarity=0.180 Sum_probs=301.3
Q ss_pred CceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 47 LATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
++......+......+..++.+++|++|++++|.+++. | .|..+++|++|++++|++++. | +..+++|++|++++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~ 94 (457)
T 3bz5_A 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDS 94 (457)
T ss_dssp HHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCS
T ss_pred HHHHHHHhcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcC
Confidence 44444444445545555677777888888888888753 4 677888888888888888753 3 77888888888888
Q ss_pred cccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCC
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIP 206 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 206 (873)
|.+++. + ++.+++|++|++++|+++++. ++.+++|++|++++|++++. .++.+++|++|++++|...+.+
T Consensus 95 N~l~~~-~--~~~l~~L~~L~L~~N~l~~l~---~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~- 164 (457)
T 3bz5_A 95 NKLTNL-D--VTPLTKLTYLNCDTNKLTKLD---VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL- 164 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECCSSCCSCCC---CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC-
T ss_pred CCCcee-e--cCCCCcCCEEECCCCcCCeec---CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc-
Confidence 888853 3 888999999999999998753 88999999999999999974 3888999999999999654344
Q ss_pred ccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCC
Q 039344 207 SELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSL 286 (873)
Q Consensus 207 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L 286 (873)
.+..+++|++|++++|++++. | +..+++|+.|++++|++++. .+..+++|+.|++++|++++.+ +..+++|
T Consensus 165 -~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L 235 (457)
T 3bz5_A 165 -DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--VTPLTQL 235 (457)
T ss_dssp -CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--CTTCTTC
T ss_pred -ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC--ccccCCC
Confidence 488899999999999999863 4 78899999999999999875 4888999999999999999843 7888999
Q ss_pred CeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCC
Q 039344 287 ERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSN 366 (873)
Q Consensus 287 ~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N 366 (873)
+.|++++|.+++++ +..+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|+|++|
T Consensus 236 ~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n 296 (457)
T 3bz5_A 236 TYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHN 296 (457)
T ss_dssp SEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTC
T ss_pred CEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCC
Confidence 99999999998865 456788889988776 46788899998776665 577899999999999
Q ss_pred ccCCCCCccccccccccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCccc
Q 039344 367 HIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAI 446 (873)
Q Consensus 367 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~ 446 (873)
...+.+|. ...+|+.|++++| ++|+.|+|++|+|++. + ++.+. +|+.||+++|++++
T Consensus 297 ~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~--~L~~L~l~~N~l~~-- 353 (457)
T 3bz5_A 297 TQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNT--KLKSLSCVNAHIQD-- 353 (457)
T ss_dssp TTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCT--TCSEEECCSSCCCB--
T ss_pred cccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCC--cCcEEECCCCCCCC--
Confidence 98777664 3345555555544 6899999999999973 3 77665 99999999999986
Q ss_pred chhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCCC
Q 039344 447 PSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNS 497 (873)
Q Consensus 447 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~ 497 (873)
++.|..|++++|.++|. ..+..|..+++++|+++|.+|..
T Consensus 354 ------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 354 ------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp ------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred ------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 35788899999999986 35677888999999999999975
No 91
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.3e-40 Score=352.03 Aligned_cols=260 Identities=25% Similarity=0.410 Sum_probs=202.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-----CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec--
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV-- 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-- 673 (873)
.++|++.+.||+|+||+||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 46789999999999999999974 36899999998743 333457899999999999999999999999654
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
...++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 45899999999999999996543 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc--------hhhhhhhhh
Q 039344 754 AKFLKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM--------SFSSLNLNI 822 (873)
Q Consensus 754 a~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~--------~~~~~~~~~ 822 (873)
++........ .....++..|+|||.+.+..++.++||||+|+++|||+||..||...... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 9876543321 22345777899999999999999999999999999999999997643211 000001111
Q ss_pred hhhhhcC-CCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 823 ALDEMLD-PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 823 ~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.. .+.+.+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHHTTCCCCCCTT----CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhccCcCCCCcC----cCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1111111 12222221 1234889999999999999999999999875
No 92
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=362.79 Aligned_cols=255 Identities=22% Similarity=0.364 Sum_probs=208.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC--------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA--------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCL 671 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 671 (873)
.++|.+.+.||+|+||+||+|+.. .+..||||++.... .....+.+.+|+++++.+ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 467899999999999999999752 34679999997642 233457799999999999 9999999999999
Q ss_pred ecceeEEEEEeccCCChhhHhccccc-------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCe
Q 039344 672 HVRHLFIVYEYFKMCSLAVILSNDAA-------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNV 738 (873)
Q Consensus 672 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 738 (873)
+.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999975432 24589999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchh
Q 039344 739 LLDFENEAHVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSF 815 (873)
Q Consensus 739 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~ 815 (873)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||........
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~ 302 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999999987654332 2334567889999999999999999999999999999999 9999875432211
Q ss_pred hhhhhhhhhhhhcCCC-CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 816 SSLNLNIALDEMLDPR-LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 816 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...+.... ...+... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 303 --------~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 303 --------FKLLKEGHRMDKPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp --------HHHHHTTCCCCCCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --------HHHHHcCCCCCCCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 1111111 224889999999999999999999999874
No 93
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-39 Score=349.02 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=200.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
..+|.+.+.||+|+||.||+|+.. ..+|+|+++.... .....+.+.+|+.++++++||||+++++++. .+..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 467999999999999999999875 3589998875433 2334578999999999999999999999875 45689999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++... ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999998643 34589999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCCccccccccccccccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCC
Q 039344 761 --SSNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835 (873)
Q Consensus 761 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (873)
........||+.|+|||++. +..++.++||||+||++|||++|+.||........... ........+.....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~---~~~~~~~~~~~~~~ 262 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF---MVGRGYASPDLSKL 262 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH---HHHHTCCCCCSTTS
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHH---HHhcCCCCcchhhh
Confidence 22334567999999999986 56688899999999999999999999875443211111 11111122222211
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
... ....+.+++.+||+.||++||++.|+++.|+
T Consensus 263 ~~~---~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 263 YKN---CPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CSS---SCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred hcC---CcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 111 1234889999999999999999999999875
No 94
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.1e-39 Score=347.23 Aligned_cols=261 Identities=20% Similarity=0.299 Sum_probs=201.1
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||+||+|+.. +|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc-CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 47889999999999999999865 6899999999765432 334577889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||++++ +.+.+... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~-l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQD-LKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSEE-HHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCCC-HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 999864 44444322 24589999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCccccccccccccccccccCC-CCCcchhHHHHHHHHHHHhCCCCCcccccc-hhhhhhhhh-------h---hhhhc
Q 039344 761 SSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSM-SFSSLNLNI-------A---LDEML 828 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~s~G~il~el~tg~~P~~~~~~~-~~~~~~~~~-------~---~~~~~ 828 (873)
........||+.|+|||++.+.. ++.++||||+||++|||++|..||...... ......... . .....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 55556678899999999988766 799999999999999999998885422211 000000000 0 00000
Q ss_pred C----CCCC---CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 829 D----PRLP---TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 829 ~----~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+ +..+ ............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0000 000000112235789999999999999999999986
No 95
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-40 Score=360.78 Aligned_cols=258 Identities=20% Similarity=0.383 Sum_probs=208.9
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeC------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 672 (873)
...++|++.+.||+|+||.||+|+.. +++.||+|+++... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 34578999999999999999999864 34889999997543 23345789999999999999999999999999
Q ss_pred cceeEEEEEeccCCChhhHhccccc---------------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeC
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAA---------------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHR 731 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~ 731 (873)
.+..++||||+++++|.+++..... ...+++.+++.++.||++|++|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9999999999999999999975321 24689999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCCeEEeccccccccCCCC--CCccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCc
Q 039344 732 DISSKNVLLDFENEAHVSDFGIAKFLKPDS--SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRD 808 (873)
Q Consensus 732 Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~ 808 (873)
||||+||+++.++.+||+|||+++...... .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 999999999999999999999998654322 12234567899999999999999999999999999999999 999987
Q ss_pred ccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...... ....+.++......... ...+.+++.+||+.||++||++.++++.|+
T Consensus 279 ~~~~~~--------~~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 279 GMAHEE--------VIYYVRDGNILACPENC---PLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp TSCHHH--------HHHHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCChHH--------HHHHHhCCCcCCCCCCC---CHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 533221 11222222222111111 224889999999999999999999999874
No 96
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.3e-40 Score=365.89 Aligned_cols=264 Identities=22% Similarity=0.356 Sum_probs=209.7
Q ss_pred HHHHHHHhcCCCCCceeeecCCeEEEEEEe------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeE
Q 039344 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKV 666 (873)
Q Consensus 594 ~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 666 (873)
..++....++|++.+.||+|+||.||+|+. .+++.||||+++... .....+.+.+|+++++++ +||||+++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 445555678899999999999999999963 356899999997542 223356799999999999 89999999
Q ss_pred EeEEEecc-eeEEEEEeccCCChhhHhccccc------------------------------------------------
Q 039344 667 YGFCLHVR-HLFIVYEYFKMCSLAVILSNDAA------------------------------------------------ 697 (873)
Q Consensus 667 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~------------------------------------------------ 697 (873)
++++.+.+ ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998755 48999999999999999976432
Q ss_pred ---------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCCCC
Q 039344 698 ---------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSS 762 (873)
Q Consensus 698 ---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 762 (873)
...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12288999999999999999999999 999999999999999999999999999987644332
Q ss_pred --CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 763 --NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 763 --~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
......||+.|+|||++.+..++.++||||+||++|||+| |+.||........... .......... +...
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~----~~~~~~~~~~--~~~~- 321 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----RLKEGTRMRA--PDYT- 321 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH----HHHHTCCCCC--CTTC-
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH----HHHcCCCCCC--CCCC-
Confidence 2334568899999999999999999999999999999998 9999875432211111 1111111111 1111
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...+.+++.+||+.||++|||++|+++.|+
T Consensus 322 ---~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 322 ---TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 124889999999999999999999999885
No 97
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.3e-40 Score=347.39 Aligned_cols=255 Identities=27% Similarity=0.442 Sum_probs=193.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCc-chhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGE-MTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|++.+.||+|+||.||+|+.. |+.||||+++...... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 367889999999999999999986 8999999987543322 22357789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC--------CCCeEEecc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF--------ENEAHVSDF 751 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~--------~~~~kl~Df 751 (873)
|||+++++|.+++.. ..+++..++.++.|++.|++|||++...+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999853 35899999999999999999999992222999999999999986 678999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCC
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (873)
|+++....... ....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||............ ... ...
T Consensus 161 g~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~--~~~ 232 (271)
T 3dtc_A 161 GLAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV----AMN--KLA 232 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH----HTS--CCC
T ss_pred Ccccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh----hcC--CCC
Confidence 99986654322 2457899999999999999999999999999999999999998754322111100 001 111
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+.+.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 233 ~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 233 LPIPST----CPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcc----cCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 111111 1234889999999999999999999999885
No 98
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.7e-40 Score=358.60 Aligned_cols=247 Identities=22% Similarity=0.275 Sum_probs=205.7
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 67899999999999999999865 79999999986432222223567889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999998653 3589999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+..+....+...
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------~~~~i~~~~~~~p~~~-- 261 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--------IYEKIVSGKVRFPSHF-- 261 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCTTC--
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--------HHHHHHcCCCCCCCCC--
Confidence 234679999999999999999999999999999999999999987533221 1222222333322222
Q ss_pred HHHHHHHHHHhhcccCCCCCCCC-----HHHHHH
Q 039344 841 DKLISIVEVTISCVDENPESRPT-----MQKVCQ 869 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~ 869 (873)
...+.+++.+||+.||++||+ ++|+++
T Consensus 262 --~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 --SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 224789999999999999998 888764
No 99
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.4e-39 Score=365.34 Aligned_cols=347 Identities=30% Similarity=0.400 Sum_probs=274.5
Q ss_pred cCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCc
Q 039344 42 GNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSN 121 (873)
Q Consensus 42 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (873)
..+++|+.|++++|.++ .+|+ +..+++|++|+|++|.+++..+ +.++++|++|++++|++++..+ +.++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34678999999999988 5564 7888999999999999985544 8889999999999999985444 888999999
Q ss_pred ccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCC
Q 039344 122 LQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSL 201 (873)
Q Consensus 122 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 201 (873)
|++++|.+++..+ +..+++|++|++++|.+.++. .+..+++|++|+++ |.+.+. ..+.++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~--~~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDL--KPLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCc--hhhccCCCCCEEECcCCcC
Confidence 9999999885433 888999999999999887643 48888999999986 555533 2388888999999999988
Q ss_pred cccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCC
Q 039344 202 SYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILR 281 (873)
Q Consensus 202 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~ 281 (873)
+.. ..+..+++|++|++++|++.+..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++.+..+ +.
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~ 262 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-LS 262 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GT
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh-hh
Confidence 743 347888889999999998886654 67788889999988888754 357788888888888888887554 77
Q ss_pred CCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEE
Q 039344 282 NLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVL 361 (873)
Q Consensus 282 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L 361 (873)
.+++|++|++++|.++++.+ +..+++|++|++++|++.+..+ +..+++|+.|++++|++++..| ++.+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 78888888888888887654 7778888888888888875443 6778888888888888876544 6778888888
Q ss_pred eccCCccCCCCCccccccccccEEEecCccccCCccccccccccccccccccccccc
Q 039344 362 DLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSN 418 (873)
Q Consensus 362 ~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 418 (873)
++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 8888888754 467778888888888888877655 7777888888888888875
No 100
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=362.95 Aligned_cols=256 Identities=23% Similarity=0.352 Sum_probs=205.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 674 (873)
.++|++.+.||+|+||+||+|+.. +++.||||++.... .......+.+|+.++++++||||+++++++.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 367889999999999999999843 56789999997532 2233567899999999999999999999999999
Q ss_pred eeEEEEEeccCCChhhHhcccc----cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC---CeE
Q 039344 675 HLFIVYEYFKMCSLAVILSNDA----AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---EAH 747 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~~k 747 (873)
..++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999997543 223589999999999999999999999 999999999999999655 499
Q ss_pred EeccccccccCCCC--CCccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhh
Q 039344 748 VSDFGIAKFLKPDS--SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIAL 824 (873)
Q Consensus 748 l~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~ 824 (873)
|+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++ |..||........ .
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~--------~ 296 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------L 296 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--------H
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--------H
Confidence 99999997553221 22234567899999999999999999999999999999998 9999875432211 1
Q ss_pred hhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 825 DEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+............ ...+.+++.+||+.||++||++++|++.|+
T Consensus 297 ~~i~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 297 EFVTSGGRMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCCccC---CHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 112221111111111 224889999999999999999999999874
No 101
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2e-40 Score=363.11 Aligned_cols=248 Identities=22% Similarity=0.275 Sum_probs=196.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHH-HHhccCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKA-LTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++.........+.+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367999999999999999999875 688999999976533333334556777776 577899999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999998653 3588999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 759 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+...
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~ 262 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNKPLQLKPNI 262 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--------HHHHHHHHSCCCCCSSS
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhcccCCCCCC
Confidence 4445556678999999999999999999999999999999999999998753322 12222222222222221
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQK 866 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~e 866 (873)
...+.+++.+||+.||++||++.+
T Consensus 263 ----~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 263 ----TNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ----CHHHHHHHHHHcccCHHhCCCCCC
Confidence 124789999999999999999853
No 102
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.9e-40 Score=354.25 Aligned_cols=250 Identities=23% Similarity=0.312 Sum_probs=186.2
Q ss_pred CceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEEecceeEEEEEecc
Q 039344 607 EHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVRHLFIVYEYFK 684 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 684 (873)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|+.+++.+. ||||+++++++.+....|+||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 478999999999999865 6899999998632 2467889999999996 9999999999999999999999999
Q ss_pred CCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC---CeEEeccccccccCCCC
Q 039344 685 MCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---EAHVSDFGIAKFLKPDS 761 (873)
Q Consensus 685 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~ 761 (873)
+++|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++ .+||+|||+++......
T Consensus 90 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 90 GGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp SCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 99999998653 4589999999999999999999999 999999999999998766 79999999998776655
Q ss_pred CCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHH
Q 039344 762 SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHD 841 (873)
Q Consensus 762 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (873)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........+..+....+......
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-TCTSAVEIMKKIKKGDFSFEGEAWKN 242 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHT
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-ccccHHHHHHHHHcCCCCCCcccccC
Confidence 55566788999999999999999999999999999999999999987533211 11112223444445555444433334
Q ss_pred HHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 842 KLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 842 ~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+.+++.+||+.||++|||++|+++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 4556899999999999999999998864
No 103
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=362.09 Aligned_cols=259 Identities=21% Similarity=0.344 Sum_probs=205.9
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEe------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCL 671 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 671 (873)
...++|++.+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3457899999999999999999985 24668999999754322 2246799999999999 8999999999999
Q ss_pred ecceeEEEEEeccCCChhhHhccccc--------------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeC
Q 039344 672 HVRHLFIVYEYFKMCSLAVILSNDAA--------------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHR 731 (873)
Q Consensus 672 ~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~ 731 (873)
+.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 99999999999999999999976432 13478999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCc
Q 039344 732 DISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRD 808 (873)
Q Consensus 732 Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~ 808 (873)
||||+||+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999876544332 234557889999999999999999999999999999998 999987
Q ss_pred ccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 809 FISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
......... ...........+ .. ....+.+++.+||+.||++|||+.++++.|+
T Consensus 277 ~~~~~~~~~----~~~~~~~~~~~~--~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 277 GIPVDANFY----KLIQNGFKMDQP--FY----ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp TCCCSHHHH----HHHHTTCCCCCC--TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCcHHHHH----HHHhcCCCCCCC--CC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 544221111 111111111111 11 1234889999999999999999999999875
No 104
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.8e-40 Score=347.88 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=204.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.++|++.+.||+|+||+||+|+..++..||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 467889999999999999999999888999999975422 2467899999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999999996532 4589999999999999999999999 9999999999999999999999999999866432
Q ss_pred CC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 761 SS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 761 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.. ......+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||......... ...........+ ...
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~-----~~~~~~~~~~~~--~~~ 246 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----EHIAQGLRLYRP--HLA 246 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----HHHHTTCCCCCC--TTC
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHH-----HHHhcccCCCCC--CcC
Confidence 11 1223456788999999998899999999999999999998 99998754322111 111111111111 111
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...+.+++.+||+.||++|||++++++.|+
T Consensus 247 ----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 247 ----SEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp ----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 124889999999999999999999999874
No 105
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-39 Score=344.41 Aligned_cols=248 Identities=21% Similarity=0.317 Sum_probs=181.0
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999975 478999999997654444444678999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+ ++++.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 56777776543 3589999999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||+....... ...+.......+...
T Consensus 166 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~~~~~~~~~~- 235 (275)
T 2eue_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL--------FKNISNGVYTLPKFL- 235 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------HHHHHHTCCCCCTTS-
T ss_pred -ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHhCCCCCCccC-
Confidence 23344578999999999987765 7899999999999999999999875332211 111112222222221
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++|||++|+++
T Consensus 236 ---~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 236 ---SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 224789999999999999999999975
No 106
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.8e-40 Score=374.88 Aligned_cols=251 Identities=23% Similarity=0.294 Sum_probs=197.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.............+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999975 47899999998753222222346678999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN-DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+...
T Consensus 227 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 9999999999998643 358999999999999999999998 8 99999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 759 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+.......+...
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--------~~~i~~~~~~~p~~~ 372 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--------FELILMEEIRFPRTL 372 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------HHHHHHCCCCCCTTS
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH--------HHHHHhCCCCCCccC
Confidence 555555667899999999999999999999999999999999999999865332211 111222222222221
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRP-----TMQKVCQ 869 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~ 869 (873)
...+.+++.+||+.||++|| +++|+++
T Consensus 373 ----~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 373 ----GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 12478999999999999999 9999975
No 107
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1e-39 Score=353.95 Aligned_cols=255 Identities=16% Similarity=0.214 Sum_probs=204.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 678 (873)
..+|++.+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+.+++.+ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 46799999999999999999985 5789999999875422 23578999999999 99999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC-----eEEecccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE-----AHVSDFGI 753 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~-----~kl~Dfg~ 753 (873)
||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 89999998754 34699999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccCCCCCC-------ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 754 AKFLKPDSSN-------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 754 a~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..............
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~----- 231 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQK----- 231 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHH-----
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHH-----
Confidence 9876543321 2456799999999999999999999999999999999999999986432211111111
Q ss_pred hcCCCCCCCCch-hHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 827 MLDPRLPTPSRN-VHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 827 ~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
+.....+.+... ..... .+.+++.+||+.||.+||+++++.+.|+
T Consensus 232 i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 232 IGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 000000000000 00011 5889999999999999999999999874
No 108
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=347.24 Aligned_cols=252 Identities=24% Similarity=0.377 Sum_probs=184.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 36799999999999999999986 57999999998643211222346789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999986532 4589999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.........|++.|+|||.+.+..++.++||||+|+++|||++|+.||........ ...........+...
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~- 235 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--------LNKVVLADYEMPSFL- 235 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCCTTS-
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--------HHHHhhcccCCcccc-
Confidence 44444456789999999999988899999999999999999999999875332111 111111122112111
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++|||++++++
T Consensus 236 ---~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 236 ---SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 224789999999999999999999976
No 109
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.6e-40 Score=356.52 Aligned_cols=250 Identities=21% Similarity=0.296 Sum_probs=189.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.+.|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 467999999999999999999876 58899999997542 135688999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC---CCCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF---ENEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~kl~Dfg~a~~ 756 (873)
|||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 127 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 127 LELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp ECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 9999999999998653 3489999999999999999999999 9999999999999975 88999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.........
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-------~~~~~i~~~~~~~~~ 272 (349)
T 2w4o_A 201 VEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-------FMFRRILNCEYYFIS 272 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-------HHHHHHHTTCCCCCT
T ss_pred cCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-------HHHHHHHhCCCccCC
Confidence 6432 23345679999999999999999999999999999999999999986433221 111222222222111
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111122335889999999999999999999986
No 110
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2e-40 Score=360.33 Aligned_cols=259 Identities=23% Similarity=0.369 Sum_probs=207.3
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeCC------CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLAS------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCL 671 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 671 (873)
...++|++.+.||+|+||.||+|+... +..||+|.+.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345789999999999999999998642 2479999997543 223357799999999999 8999999999999
Q ss_pred ecceeEEEEEeccCCChhhHhccccc-----------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee
Q 039344 672 HVRHLFIVYEYFKMCSLAVILSNDAA-----------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL 740 (873)
Q Consensus 672 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill 740 (873)
+.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999865431 24578999999999999999999999 99999999999999
Q ss_pred CCCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhh
Q 039344 741 DFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSS 817 (873)
Q Consensus 741 ~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~ 817 (873)
+.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||+|+++|||+| |..||..........
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 277 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH
Confidence 99999999999999866443322 223456789999999999999999999999999999998 999987543221111
Q ss_pred hhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...........+ ... ...+.+++.+||+.||.+|||+.|+++.|+
T Consensus 278 ----~~~~~~~~~~~~--~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 278 ----KLVKDGYQMAQP--AFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp ----HHHHHTCCCCCC--TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----HHHhcCCCCCCC--CCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 111111111111 111 224889999999999999999999999874
No 111
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.1e-40 Score=368.13 Aligned_cols=264 Identities=21% Similarity=0.252 Sum_probs=207.3
Q ss_pred HHHHHHHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe
Q 039344 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672 (873)
Q Consensus 594 ~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 672 (873)
+.++....++|++.++||+|+||+||+|+.+ +++.||+|++.+.........+.+.+|+.+++.++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444555789999999999999999999876 578999999864211111112348899999999999999999999999
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccc
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFG 752 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 752 (873)
.+..|+||||+++|+|.+++... ...+++..+..++.||+.|++|||+. +|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 99999999999999999999653 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC-ccccccccccccccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 753 IAKFLKPDSSN-WTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 753 ~a~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
+|+........ ....+||+.|+|||++. ...++.++||||+||++|||++|+.||................ ..
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-~~ 299 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK-ER 299 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH-HH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc-cc
Confidence 99876544332 23468999999999987 5668999999999999999999999987544322111111100 01
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHH
Q 039344 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPES--RPTMQKVCQ 869 (873)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~ 869 (873)
..++..... ....+.+++.+|+..+|++ ||+++|+++
T Consensus 300 ---~~~p~~~~~---~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 300 ---FQFPTQVTD---VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ---CCCCSSCCC---SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ---ccCCccccc---CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 111211111 1224789999999888888 999999875
No 112
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.4e-40 Score=357.42 Aligned_cols=255 Identities=25% Similarity=0.381 Sum_probs=198.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce----
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH---- 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 675 (873)
.++|++.+.||+|+||.||+|+. .+++.||||+++..........+.+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999985 5789999999987655555556789999999999999999999999987553
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.|+||||+++++|.+++... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 49999999999999998643 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 756 FLKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 756 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
........ .....||+.|+|||++.+..++.++||||+|+++|||++|+.||.......... .......
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~--------~~~~~~~ 236 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY--------QHVREDP 236 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--------HHHHCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--------HHhcCCC
Confidence 76543222 234568999999999999999999999999999999999999987543321111 1111111
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+..........+.+++.+||+.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 237 IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 1110000112235889999999999999998777654
No 113
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=358.50 Aligned_cols=252 Identities=17% Similarity=0.262 Sum_probs=205.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 367999999999999999999765 68999999987532 22346789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC--CCCeEEecccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF--ENEAHVSDFGIAKFL 757 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~--~~~~kl~Dfg~a~~~ 757 (873)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||+++..
T Consensus 127 ~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999986432 3589999999999999999999999 9999999999999984 467999999999877
Q ss_pred CCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 758 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 758 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..+.......+..
T Consensus 202 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~--------~~i~~~~~~~~~~ 272 (387)
T 1kob_A 202 NPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL--------QNVKRCDWEFDED 272 (387)
T ss_dssp CTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH--------HHHHHCCCCCCSS
T ss_pred CCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH--------HHHHhCCCCCCcc
Confidence 543 2334567999999999999999999999999999999999999998754332111 1111111111111
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
........+.+++.+||+.||++|||++|+++
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 11112234889999999999999999999986
No 114
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=8.4e-40 Score=368.37 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=207.2
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|.+.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 67899999999999999999865 79999999986432222223567899999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 96 EYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp ECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999998643 4589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... .....+.++....+....
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~p~~~s 240 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--------TLFKKICDGIFYTPQYLN 240 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--------HHHHHHHTTCCCCCTTCC
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcCCcCCCccCC
Confidence 33445689999999999988776 68999999999999999999998753322 112223333333222211
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+.+++.+||+.||++|||++|+++
T Consensus 241 ----~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 241 ----PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 24789999999999999999999986
No 115
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.1e-40 Score=356.51 Aligned_cols=251 Identities=20% Similarity=0.256 Sum_probs=202.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 678 (873)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++..... ...+|++++.++ +||||+++++++.+.+..|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 467999999999999999999765 689999999975432 234688888888 79999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC-C---CeEEeccccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE-N---EAHVSDFGIA 754 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~-~---~~kl~Dfg~a 754 (873)
||||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||++..+ + .+||+|||++
T Consensus 94 v~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp EECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 99999999999998654 3589999999999999999999999 99999999999998543 3 4999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCC
Q 039344 755 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834 (873)
Q Consensus 755 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (873)
+.............||+.|+|||++.+..++.++||||+||++|||++|+.||........ ......+..+....
T Consensus 168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-----~~~~~~i~~~~~~~ 242 (342)
T 2qr7_A 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP-----EEILARIGSGKFSL 242 (342)
T ss_dssp EECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH-----HHHHHHHHHCCCCC
T ss_pred ccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH-----HHHHHHHccCCccc
Confidence 9876655555667899999999999888899999999999999999999999975322111 11122222222222
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+..........+.+++.+||+.||++||+++++++
T Consensus 243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 21111122335889999999999999999999875
No 116
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.3e-39 Score=348.82 Aligned_cols=263 Identities=19% Similarity=0.337 Sum_probs=191.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|++.+.||+|+||+||+|+.. +|+.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE--GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT--CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc--ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 467999999999999999999764 6899999998754322 2236788999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccc---cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
|||++ ++|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 58988886432 223588999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhh-------h---hh
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNI-------A---LD 825 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~-------~---~~ 825 (873)
............||+.|+|||++.+ ..++.++||||+||++|||++|+.||............... . ..
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 7655455556689999999999876 46899999999999999999999999754322111110000 0 00
Q ss_pred hh--cCCCCCCC-CchhH---------HHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 826 EM--LDPRLPTP-SRNVH---------DKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 826 ~~--~~~~~~~~-~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. ..+..... ..... .....+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 00000000 00000 11235889999999999999999999975
No 117
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.6e-41 Score=371.30 Aligned_cols=259 Identities=20% Similarity=0.257 Sum_probs=205.2
Q ss_pred HHHHHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc
Q 039344 596 EIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 596 e~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 674 (873)
++....++|++.+.||+|+||+||+|+.+ +++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999865 68899999986421111111244789999999999999999999999999
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
..|+||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecccee
Confidence 999999999999999998542 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-CccccccccccccccccccCC----CCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcC
Q 039344 755 KFLKPDSS-NWTELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLD 829 (873)
Q Consensus 755 ~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 829 (873)
+....... .....+||+.|+|||++.+.. ++.++||||+||++|||++|+.||............... ...
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~----~~~ 291 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH----KNS 291 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH----HHH
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc----ccc
Confidence 87654432 233568999999999988665 788999999999999999999998754322111111110 001
Q ss_pred CCCCCCCchhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHH
Q 039344 830 PRLPTPSRNVHDKLISIVEVTISCVDENPES--RPTMQKVCQ 869 (873)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~ 869 (873)
..++..... ...+.+++.+|++.+|++ ||+++|+++
T Consensus 292 ~~~p~~~~~----s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 292 LTFPDDNDI----SKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CCCCTTCCC----CHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ccCCCcccc----cHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 112211111 224789999999999988 999999975
No 118
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9e-40 Score=352.11 Aligned_cols=256 Identities=23% Similarity=0.379 Sum_probs=207.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEe------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 674 (873)
..+|.+.+.||+|+||.||+|+. .+++.||+|+++... .....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 46788999999999999999975 345889999997542 2334577999999999999999999999999999
Q ss_pred eeEEEEEeccCCChhhHhccccc---------------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCC
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAA---------------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDI 733 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dl 733 (873)
..++||||+++++|.+++..... ...+++.+++.++.|++.|++|||++ +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999975432 13478999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCccc
Q 039344 734 SSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 810 (873)
Q Consensus 734 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~ 810 (873)
||+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544332 223456788999999999899999999999999999999 99998754
Q ss_pred ccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 811 SSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
........ ......... +.. ....+.+++.+||+.||++||+++|+++.|+
T Consensus 257 ~~~~~~~~-----~~~~~~~~~--~~~----~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 257 PPERLFNL-----LKTGHRMER--PDN----CSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp CGGGHHHH-----HHTTCCCCC--CTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHHHHH-----hhcCCcCCC--Ccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 43221111 111111111 111 1234889999999999999999999999875
No 119
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.9e-40 Score=351.99 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=208.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEe------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEec
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHV 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 673 (873)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... .....+.+.+|+.+++++ +||||+++++++.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 46789999999999999999974 357889999997542 223357799999999999 999999999999999
Q ss_pred ceeEEEEEeccCCChhhHhccccc---------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCe
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAA---------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNV 738 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 738 (873)
+..++||||+++|+|.+++..... ...+++..++.++.|++.|++|||++ +|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999975432 22489999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchh
Q 039344 739 LLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSF 815 (873)
Q Consensus 739 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~ 815 (873)
+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||+| |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999877654332 223457789999999999999999999999999999999 9999875432211
Q ss_pred hhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 816 SSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.. ...........+ .. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 257 ~~----~~~~~~~~~~~~--~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 257 FY----KMIKEGFRMLSP--EH----APAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp HH----HHHHHTCCCCCC--TT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HH----HHhccCCCCCCc--cc----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 11 111111111111 11 1234889999999999999999999999885
No 120
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.7e-40 Score=371.83 Aligned_cols=254 Identities=23% Similarity=0.404 Sum_probs=207.4
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
...++|++.+.||+|+||.||+|+..++..||||+++... ...+.|.+|+.+++.++||||+++++++. .+..++
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 3457788999999999999999999889999999997532 22578999999999999999999999986 667899
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 260 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 999999999999997543 23588999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 759 PDSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 759 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... ......+++.|+|||++....++.++|||||||++|||+| |+.||.......... .+... .+.+.+.
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~-----~i~~~--~~~~~~~ 408 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-----ALERG--YRMPRPE 408 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-----HHHHT--CCCCCCT
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcC--CCCCCCC
Confidence 3211 1123346788999999998999999999999999999999 999987543322111 11111 1222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ....+.+++.+||+.||++|||+++|++.|+
T Consensus 409 ~----~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 409 N----CPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp T----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 1 1234889999999999999999999999885
No 121
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.7e-39 Score=366.57 Aligned_cols=247 Identities=28% Similarity=0.429 Sum_probs=202.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc-eeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR-HLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. |+.||||+++... ..+.|.+|+.++++++||||+++++++.+.+ ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 467888999999999999999887 7899999997542 2477999999999999999999999987765 78999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 99999999999997543 23478999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-CCCCCCc
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-RLPTPSR 837 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 837 (873)
. .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||......... ..+..+ +++.+..
T Consensus 342 ~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~--------~~i~~~~~~~~p~~ 410 (450)
T 1k9a_A 342 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV--------PRVEKGYKMDAPDG 410 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH--------HHHHTTCCCCCCTT
T ss_pred c---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH--------HHHHcCCCCCCCCc
Confidence 2 223467889999999999999999999999999999998 99998754432211 111111 2222221
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.+++.+||+.||++|||+.++++.|+
T Consensus 411 ----~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 411 ----CPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1234889999999999999999999999875
No 122
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2e-39 Score=345.76 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=209.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|.+.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 367889999999999999999875 5889999998765444444567889999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++....
T Consensus 94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999987543 3589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.........|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ....+.......+...
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~- 238 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--------TYLRIKKNEYSIPKHI- 238 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCCCCTTS-
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhhccCCCcccc-
Confidence 5555556679999999999999889999999999999999999999987533211 1112222222222221
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++|||++|+++
T Consensus 239 ---~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 239 ---NPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---CHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 124789999999999999999999876
No 123
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-39 Score=355.25 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=200.7
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
..|+..+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999985 579999999997654444444577999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+. |++.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9998 5777776432 24589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCccccccccccccccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 761 SSNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
....||+.|+|||++. ...++.++|||||||++|||++|+.||........... ......+... ..
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~-----~~~~~~~~~~--~~ 276 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-----IAQNESPALQ--SG 276 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHSCCCCCC--CT
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-----HHhcCCCCCC--CC
Confidence 3457999999999884 56789999999999999999999999865432211111 0111111111 11
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
. ....+.+++.+||+.||++|||++++++
T Consensus 277 ~---~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 277 H---WSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C---CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1 1224789999999999999999999875
No 124
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.9e-39 Score=360.21 Aligned_cols=264 Identities=18% Similarity=0.274 Sum_probs=204.0
Q ss_pred hcCCCCCceeeec--CCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 601 TNDFDDEHCIGKG--GQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 601 ~~~~~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
..+|++.+.||+| +||+||+|+.. +|+.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 4679999999999 99999999875 7999999999754322 234577889999999999999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999875432 3489999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCC-------CCcccccccccccccccccc--CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhc
Q 039344 758 KPDS-------SNWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEML 828 (873)
Q Consensus 758 ~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 828 (873)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...................+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 3221 11223478999999999987 57899999999999999999999999754432211111111000000
Q ss_pred CCCC---------------------------C-------CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 829 DPRL---------------------------P-------TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 829 ~~~~---------------------------~-------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+... + ............+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0000 0 000001112345889999999999999999999975
No 125
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=352.59 Aligned_cols=257 Identities=22% Similarity=0.356 Sum_probs=191.6
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeCCC----cEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLASG----EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
..++|++.+.||+|+||.||+|+.... ..||||+++...... ...+.+.+|++++++++||||+++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 346799999999999999999986533 279999997543222 335789999999999999999999999987665
Q ss_pred e------EEEEEeccCCChhhHhcccccc---cCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCe
Q 039344 676 L------FIVYEYFKMCSLAVILSNDAAA---KNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA 746 (873)
Q Consensus 676 ~------~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~ 746 (873)
. ++||||+++++|.+++...... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 4 9999999999999998654322 2589999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhh
Q 039344 747 HVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIA 823 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~ 823 (873)
||+|||+++....... ......+++.|+|||.+.+..++.++||||+||++|||++ |+.||.........
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~------- 249 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY------- 249 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-------
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH-------
Confidence 9999999987654332 1223456788999999999999999999999999999999 99998754432211
Q ss_pred hhhhcCCC-CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 824 LDEMLDPR-LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 824 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+.... ...+.. ....+.+++.+||+.||++|||+.++++.|+
T Consensus 250 -~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 250 -NYLIGGNRLKQPPE----CMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp -HHHHTTCCCCCCTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHhcCCCCCCCCc----cCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 111211 1234889999999999999999999998874
No 126
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.2e-39 Score=348.25 Aligned_cols=261 Identities=21% Similarity=0.296 Sum_probs=197.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|++.+.||+|+||.||+|+. .+|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35799999999999999999986 57899999999764444445567899999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 680 YEYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
|||+++++|.+++.... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999986532 234589999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 759 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
..........|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ......+.....+....
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~- 260 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL------YSLCKKIEQCDYPPLPS- 260 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH------HHHHHHHHTTCSCCCCT-
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH------HHHHHHhhcccCCCCcc-
Confidence 54444445678999999999999999999999999999999999999986432110 01111111111111110
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
......+.+++.+||+.||++|||++++++.|+
T Consensus 261 -~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 261 -DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 011224889999999999999999999999874
No 127
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.4e-39 Score=349.53 Aligned_cols=254 Identities=19% Similarity=0.263 Sum_probs=207.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcc---hhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEM---TFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
.++|++.+.||+|+||.||+|+.. +|+.||+|++........ ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356899999999999999999865 689999999875433221 1357899999999999999999999999999999
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC----CeEEeccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFG 752 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg 752 (873)
++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999998653 3588999999999999999999999 999999999999999888 79999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 753 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 753 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
+++..... .......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .....+.....
T Consensus 165 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITSVSY 235 (321)
T ss_dssp TCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCC
T ss_pred cceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhccc
Confidence 99876543 2334567999999999999999999999999999999999999998643321 11122222222
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+..........+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2211111122335889999999999999999999986
No 128
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=348.47 Aligned_cols=251 Identities=27% Similarity=0.460 Sum_probs=196.0
Q ss_pred cCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYE 681 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 681 (873)
++|++.+.||+|+||+||+|+.. ++.||+|++... ...+.+.+|++++++++||||+++++++. +..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEE
Confidence 57888999999999999999886 789999998642 23578999999999999999999999886 34799999
Q ss_pred eccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC-eEEeccccccccCCC
Q 039344 682 YFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE-AHVSDFGIAKFLKPD 760 (873)
Q Consensus 682 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~-~kl~Dfg~a~~~~~~ 760 (873)
|+++++|.+++........+++..++.++.|+++|++|||+....+|+||||||+||+++.++. +||+|||+++.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999986655456889999999999999999999932129999999999999998886 799999999765432
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||+........ ..........+.....
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 228 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR------IMWAVHNGTRPPLIKN-- 228 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH------HHHHHHTTCCCCCBTT--
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH------HHHHHhcCCCCCcccc--
Confidence 23456899999999999999999999999999999999999998754322110 0001111111111111
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 841 DKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.+++.+||+.||++|||++++++.|+
T Consensus 229 -~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 229 -LPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp -CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1224789999999999999999999999874
No 129
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.6e-39 Score=353.10 Aligned_cols=252 Identities=22% Similarity=0.282 Sum_probs=193.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||+||+|+.. +++.||+|++...... .+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 467999999999999999999875 7899999999754322 25688999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC--eEEecccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE--AHVSDFGIAKFL 757 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~--~kl~Dfg~a~~~ 757 (873)
|||+++|+|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 9999999999998543 3589999999999999999999999 9999999999999988775 999999999754
Q ss_pred CCCCCCccccccccccccccccccCCCCCc-chhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 758 KPDSSNWTELAGTYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 758 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||.......... .....+.......+.
T Consensus 169 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~~~~~~~~~~~~~~~ 243 (361)
T 3uc3_A 169 VLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR----KTIQRILSVKYSIPD 243 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH----HHHHHHHTTCCCCCT
T ss_pred ccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH----HHHHHHhcCCCCCCC
Confidence 332 22344679999999999988887655 899999999999999999997544321111 112222222222111
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. .....+.+++.+||+.||++|||++|+++
T Consensus 244 ~~--~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 244 DI--RISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp TS--CCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cC--CCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 10 01224789999999999999999999975
No 130
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.3e-39 Score=344.02 Aligned_cols=257 Identities=17% Similarity=0.197 Sum_probs=204.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 678 (873)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+..++.+ +|+|++++++++.+....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 46799999999999999999985 5799999999865422 24577899999999 89999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC-----eEEecccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE-----AHVSDFGI 753 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~-----~kl~Dfg~ 753 (873)
||||+ +++|.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 89999999653 23589999999999999999999999 9999999999999988776 99999999
Q ss_pred ccccCCCCC-------CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 754 AKFLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 754 a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
++....... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||............... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~ 236 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI-GEK 236 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH-HHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH-Hhh
Confidence 987754432 134567999999999999999999999999999999999999999864322111110000 000
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
......+ .........+.+++.+||+.||++||++++|++.|+
T Consensus 237 ~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 237 KQSTPLR---ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHSCHH---HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred ccCccHH---HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 0000000 000011235889999999999999999999999874
No 131
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-39 Score=356.47 Aligned_cols=261 Identities=23% Similarity=0.281 Sum_probs=202.6
Q ss_pred HHHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCC--CcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc
Q 039344 598 IRATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLP--GEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 598 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 674 (873)
....++|++.+.||+|+||.||+|+. .+++.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34567899999999999999999976 4688999999864311 12233578999999999999999999999999999
Q ss_pred eeEEEEEeccCCChhhHhccccc-------------------------------------ccCCChHHHHHHHHHHHHHH
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAA-------------------------------------AKNLGWTRRMNMIKGIVDAL 717 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~-------------------------------------~~~~~~~~~~~i~~~i~~~l 717 (873)
..++||||+++|+|.+++..... ...+++..++.++.|++.|+
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999853111 11235677889999999999
Q ss_pred HHHHhCCCCCeeeCCCCCCCeeeCCCC--CeEEeccccccccCCCCC----Ccccccccccccccccccc--CCCCCcch
Q 039344 718 SYMHNDCFPPIVHRDISSKNVLLDFEN--EAHVSDFGIAKFLKPDSS----NWTELAGTYGYVAPELAYT--MKVTEKCD 789 (873)
Q Consensus 718 ~~LH~~~~~~i~H~Dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~sD 789 (873)
+|||++ +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998777 899999999986543221 2345679999999999875 67889999
Q ss_pred hHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 790 VYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 790 v~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
|||+||++|||++|+.||....... ....+.......+..........+.+++.+||+.||++||++.|+++
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDAD--------TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHH--------HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999999999987543221 12222222222222222222345889999999999999999999986
No 132
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.6e-39 Score=343.05 Aligned_cols=253 Identities=20% Similarity=0.291 Sum_probs=205.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 468999999999999999999764 6899999998754332 23356788999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC---eEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~Dfg~a~~ 756 (873)
|||++++++.+.+... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+..
T Consensus 84 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999998888543 4589999999999999999999999 9999999999999987665 99999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||.......... .+.......+.
T Consensus 158 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--------~~~~~~~~~~~ 228 (284)
T 3kk8_A 158 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA--------QIKAGAYDYPS 228 (284)
T ss_dssp CCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--------HHHHTCCCCCT
T ss_pred cccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH--------HHHhccccCCc
Confidence 6543 33345679999999999999999999999999999999999999986543221111 11111111111
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111112234889999999999999999999976
No 133
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.4e-39 Score=352.18 Aligned_cols=252 Identities=23% Similarity=0.430 Sum_probs=197.3
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCc----EEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGE----IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
++|++.+.||+|+||+||+|+.. +|+ .||+|.++.... ....+.+.+|+.++++++||||++++++|.+.. .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 67899999999999999999854 444 368888764322 223578999999999999999999999998754 7
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++|+||+.+|+|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 88999999999999986543 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 757 LKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 757 ~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
....... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||+........ ...... ...+
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~--~~~~ 239 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----SILEKG--ERLP 239 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTT--CCCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH-----HHHHcC--CCCC
Confidence 7544332 233456889999999999999999999999999999999 99998754332211 111111 1122
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+... ...+.+++.+||+.||++||++.++++.|+
T Consensus 240 ~~~~~----~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 240 QPPIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCTTB----CHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCccC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 22211 224889999999999999999999998874
No 134
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.3e-39 Score=351.87 Aligned_cols=256 Identities=23% Similarity=0.364 Sum_probs=205.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEe--------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL--------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCL 671 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 671 (873)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 47899999999999999999976 356789999997542 233457799999999999 8999999999999
Q ss_pred ecceeEEEEEeccCCChhhHhccccc-------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCe
Q 039344 672 HVRHLFIVYEYFKMCSLAVILSNDAA-------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNV 738 (873)
Q Consensus 672 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 738 (873)
+.+..++||||+++++|.+++..... ...+++..++.++.|++.|++|||++ +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999976432 23488999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchh
Q 039344 739 LLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSF 815 (873)
Q Consensus 739 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~ 815 (873)
+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||........
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 268 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence 9999999999999999876543321 223456789999999998889999999999999999999 9999875432211
Q ss_pred hhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 816 SSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
... ......... +.. ....+.+++.+||+.||++||+++|+++.|+
T Consensus 269 ~~~-----~~~~~~~~~--~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 269 FKL-----LKEGHRMDK--PAN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp HHH-----HHHTCCCCC--CTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHH-----HhcCCCCCC--Ccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 111111111 111 1224889999999999999999999999874
No 135
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=348.36 Aligned_cols=261 Identities=21% Similarity=0.341 Sum_probs=199.1
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||+||+|+.. +|+.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 57899999999999999999875 589999999875432 2334567889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||++++++.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999887543 3489999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhh-------------hhhh
Q 039344 761 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNI-------------ALDE 826 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~-------------~~~~ 826 (873)
........||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||............... ....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 555566789999999999876 56799999999999999999999999754432111100000 0000
Q ss_pred hcCCCCCCCCch------hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 827 MLDPRLPTPSRN------VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 827 ~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
......+.+... .......+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 001111111000 0112335789999999999999999999985
No 136
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.8e-39 Score=343.55 Aligned_cols=252 Identities=22% Similarity=0.378 Sum_probs=193.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
.++|++.+.||+|+||.||+|+.. .+..||+|++.... .....+.+.+|+.++++++||||+++++++. .+..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 467889999999999999999764 24579999987542 2334577999999999999999999999984 5678
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999986432 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCC-CC
Q 039344 757 LKPDSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPR-LP 833 (873)
Q Consensus 757 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 833 (873)
...... ......+++.|+|||.+.+..++.++||||+|+++|||++ |..||........ ...+.... .+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--------~~~i~~~~~~~ 237 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--------IGRIENGERLP 237 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--------HHHHHTTCCCC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--------HHHHHcCCCCC
Confidence 654322 2233456789999999998899999999999999999997 9999875433211 11111111 11
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 238 MPPN----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111 1234889999999999999999999999874
No 137
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-39 Score=348.84 Aligned_cols=257 Identities=22% Similarity=0.336 Sum_probs=198.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999865 7889999999765444444567899999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 113 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 9999999999998643 3589999999999999999999999 999999999999999999999999999986654
Q ss_pred CC-CCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 760 DS-SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 760 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.. .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||......... .... ...+.+...
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~----~~~~~~~~~ 257 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG-----AHIN----QAIPRPSTV 257 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH-----HHHH----SCCCCGGGT
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH-----HHhc----cCCCCcccc
Confidence 32 2233567899999999999999999999999999999999999998753321110 0011 111100000
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCC-CHHHHHHHhc
Q 039344 839 VHDKLISIVEVTISCVDENPESRP-TMQKVCQLLK 872 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~ 872 (873)
.......+.+++.+||+.||++|| +++++++.|+
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 011122488999999999999999 9999998874
No 138
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6e-40 Score=354.76 Aligned_cols=261 Identities=21% Similarity=0.315 Sum_probs=209.8
Q ss_pred HHHHHhcCCCCCceeeecCCeEEEEEEeC------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeE
Q 039344 596 EIIRATNDFDDEHCIGKGGQGSVYMSKLA------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGF 669 (873)
Q Consensus 596 e~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 669 (873)
++....++|++.+.||+|+||.||+|+.. +++.||+|++.... .......+.+|+.+++.++||||++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 33445678999999999999999999754 47889999997542 22335678999999999999999999999
Q ss_pred EEecceeEEEEEeccCCChhhHhccccc-------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC
Q 039344 670 CLHVRHLFIVYEYFKMCSLAVILSNDAA-------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742 (873)
Q Consensus 670 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~ 742 (873)
+.+.+..++||||+++++|.+++..... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcC
Confidence 9999999999999999999999875432 13568999999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhh
Q 039344 743 ENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLN 819 (873)
Q Consensus 743 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~ 819 (873)
++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.......
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----- 248 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----- 248 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-----
Confidence 999999999999866433221 223456889999999999999999999999999999999 899986533221
Q ss_pred hhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 820 LNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+........... ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 249 ---~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 249 ---VLRFVMEGGLLDKPDN---CPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp ---HHHHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred ---HHHHHHcCCcCCCCCC---CCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1112222222111111 1224889999999999999999999999875
No 139
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=356.80 Aligned_cols=247 Identities=22% Similarity=0.284 Sum_probs=196.9
Q ss_pred CCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEEEecc
Q 039344 606 DEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFK 684 (873)
Q Consensus 606 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 684 (873)
..+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 357899999999999976 468999999987532 2335789999999999999999999999999999999999999
Q ss_pred CCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee--CCCCCeEEeccccccccCCCCC
Q 039344 685 MCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL--DFENEAHVSDFGIAKFLKPDSS 762 (873)
Q Consensus 685 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill--~~~~~~kl~Dfg~a~~~~~~~~ 762 (873)
+++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++......
T Consensus 170 ~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~- 243 (373)
T 2x4f_A 170 GGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE- 243 (373)
T ss_dssp TCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-
Confidence 999998886432 3589999999999999999999999 99999999999999 567899999999998775432
Q ss_pred CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHH
Q 039344 763 NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDK 842 (873)
Q Consensus 763 ~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (873)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......+.......
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--------~~~~i~~~~~~~~~~~~~~~ 315 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE--------TLNNILACRWDLEDEEFQDI 315 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTCCCSCSGGGTTS
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhccCCCChhhhccC
Confidence 3344579999999999998889999999999999999999999987543221 11222222222222111222
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 843 LISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 843 ~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++|||++|+++
T Consensus 316 ~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 345889999999999999999999986
No 140
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.1e-39 Score=355.43 Aligned_cols=251 Identities=21% Similarity=0.264 Sum_probs=191.1
Q ss_pred cCCCCC-ceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEe----cc
Q 039344 602 NDFDDE-HCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLH----VR 674 (873)
Q Consensus 602 ~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~ 674 (873)
++|.+. +.||+|+||+||+|+.. +|+.||||++... ..+.+|++++.+. +||||+++++++.. .+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 456665 68999999999999765 6899999998631 4567888887544 89999999999876 56
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC---CCCeEEecc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF---ENEAHVSDF 751 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~kl~Df 751 (873)
..|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 7899999999999999997543 24589999999999999999999999 9999999999999998 789999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCC
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (873)
|+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.............. .+..+.
T Consensus 209 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~ 283 (400)
T 1nxk_A 209 GFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQ 283 (400)
T ss_dssp TTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTC
T ss_pred ccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCc
Confidence 999876533 233456789999999999999999999999999999999999999975443221111111 111111
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+..........+.+++.+||+.||++|||++|+++
T Consensus 284 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 284 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111112234889999999999999999999986
No 141
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-39 Score=372.37 Aligned_cols=254 Identities=25% Similarity=0.394 Sum_probs=208.0
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
...+|++.+.||+|+||.||+|+.. +++.||||+++.... ..++|.+|+.++++++||||++++++|.+.+..++
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 3467888999999999999999876 488999999975422 25789999999999999999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999999997533 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 759 PDSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 759 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||......... ..+... .+...+.
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~-----~~~~~~--~~~~~~~ 442 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKD--YRMERPE 442 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-----HHHHTT--CCCCCCT
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcC--CCCCCCC
Confidence 4322 1223446788999999999999999999999999999999 99998754322111 111111 1112121
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ....+.+++.+||+.||++|||++++++.|+
T Consensus 443 ~----~~~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 443 G----CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1 1234889999999999999999999999885
No 142
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.3e-39 Score=351.75 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=209.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|.+.+.||+|+||.||+++.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467899999999999999999865 5789999998765444444567899999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 9999999999987543 4589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.........|++.|+|||.+.+..++.++||||+|+++|||++|+.||........ ...+.......+...
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~~~~~~~~~~- 264 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET--------YLRIKKNEYSIPKHI- 264 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------HHHHHHTCCCCCTTS-
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH--------HHHHhcCCCCCCccC-
Confidence 55555567799999999999998999999999999999999999999875332111 111111122212111
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++||+++|+++
T Consensus 265 ---~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 265 ---NPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 124789999999999999999999876
No 143
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.3e-39 Score=345.64 Aligned_cols=260 Identities=22% Similarity=0.398 Sum_probs=204.3
Q ss_pred cCCCCCceeeecCCeEEEEEEe-----CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec--c
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--R 674 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 674 (873)
..|++.+.||+|+||.||+|++ .+++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+. .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG--NHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc--hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 5588899999999999999983 46899999999754322 2357899999999999999999999999876 6
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
..++||||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 6899999999999999985433 4589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc-------hhhhhhhhhhh
Q 039344 755 KFLKPDSS---NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM-------SFSSLNLNIAL 824 (873)
Q Consensus 755 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~-------~~~~~~~~~~~ 824 (873)
+....... ......||..|+|||.+.+..++.++||||+|+++|||+||+.|+...... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 87765443 223456788899999999999999999999999999999999996532110 00011111111
Q ss_pred hhhcCC-CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 825 DEMLDP-RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 825 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+... +.+.+.. ....+.+++.+||+.||++|||++++++.|+
T Consensus 254 ~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 254 NTLKEGKRLPCPPN----CPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHTTCCCCCCTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhccCCCCCCCC----CCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 111111 1222211 1234889999999999999999999999885
No 144
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=359.93 Aligned_cols=266 Identities=19% Similarity=0.292 Sum_probs=209.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc--eeE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR--HLF 677 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~ 677 (873)
.++|.+.+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|++++++++||||+++++++.+.. ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 357899999999999999999865 589999999875322 222577889999999999999999999998755 779
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee----CCCCCeEEecccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL----DFENEAHVSDFGI 753 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill----~~~~~~kl~Dfg~ 753 (873)
+||||+++|+|.+++........+++..++.++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998766555599999999999999999999999 99999999999999 7777899999999
Q ss_pred ccccCCCCCCcccccccccccccccccc--------CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhh
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 825 (873)
++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..................
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 98765432 3345679999999998865 56788999999999999999999998743321110000000000
Q ss_pred hh-----------------cCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 826 EM-----------------LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 826 ~~-----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.. ..+..+............+.+++.+||+.||++||+++|+++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 00 001122222223455667889999999999999999999988763
No 145
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.4e-39 Score=367.57 Aligned_cols=252 Identities=26% Similarity=0.436 Sum_probs=201.7
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..++|++.+.||+|+||.||+|+..++..||||+++.... ..++|.+|+.++++++||||+++++++.+ +..++|
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 3467888999999999999999998888899999975422 24689999999999999999999999876 678999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999996532 24589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-CCCCCC
Q 039344 760 DSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-RLPTPS 836 (873)
Q Consensus 760 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 836 (873)
... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||........ ...+..+ +.+.+.
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--------~~~i~~~~~~~~~~ 404 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------LDQVERGYRMPCPP 404 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCT
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC
Confidence 322 2223456789999999999999999999999999999999 9999875432211 1111111 222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ....+.+++.+||+.||++|||++++++.|+
T Consensus 405 ~----~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 405 E----CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp T----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 1234889999999999999999999999875
No 146
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-39 Score=343.82 Aligned_cols=249 Identities=26% Similarity=0.438 Sum_probs=200.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +++.||+|++.............+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999765 6779999998643222222356789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||++++++.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 9999999999998643 3589999999999999999999999 999999999999999999999999999865433
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ...+.......+...
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~- 230 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------YKRISRVEFTFPDFV- 230 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------HHHHHHTCCCCCTTS-
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH--------HHHHHhCCCCCCCcC-
Confidence 2 23446789999999999999999999999999999999999999874332211 111111122212111
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++|||++|+++
T Consensus 231 ---~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 231 ---TEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp ---CHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 124789999999999999999999986
No 147
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3e-39 Score=341.25 Aligned_cols=250 Identities=20% Similarity=0.311 Sum_probs=204.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|... +++.||+|++....... .+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 456899999999999999999765 57789999987543322 57799999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee---CCCCCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~~ 756 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||++..
T Consensus 85 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 85 MELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 9999999999988643 3589999999999999999999999 99999999999999 7888999999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......||+.|+|||.+.+. ++.++||||+|+++|||++|+.||....... ....+.......+.
T Consensus 159 ~~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~ 228 (277)
T 3f3z_A 159 FKPG-KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--------VMLKIREGTFTFPE 228 (277)
T ss_dssp CCTT-SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCH
T ss_pred ccCc-cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhCCCCCCc
Confidence 6543 333456799999999988654 8999999999999999999999987533221 11222222222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++|||+.++++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 229 KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 211122345889999999999999999999875
No 148
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6.7e-39 Score=340.43 Aligned_cols=254 Identities=30% Similarity=0.458 Sum_probs=201.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchh----HHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTF----QQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
.++|++.+.||+|+||+||+|+. .+++.||+|++.......... .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36799999999999999999986 478999999987654333221 167899999999999999999999986654
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCC--eeeCCCCCCCeeeCCCCC-----eEE
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP--IVHRDISSKNVLLDFENE-----AHV 748 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~-----~kl 748 (873)
++||||+++++|.+++.... ..+++..++.++.|++.|++|||++ + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 79999999999988886543 4589999999999999999999999 8 999999999999998876 999
Q ss_pred eccccccccCCCCCCccccccccccccccccc--cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 749 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 749 ~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
+|||+++.... ......||+.|+|||.+. ...++.++||||+||++|||++|+.||.......... .......
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~ 245 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREE 245 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHS
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhcc
Confidence 99999975432 344567999999999984 4557889999999999999999999987543221100 0011111
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...+..+. . ....+.+++.+||+.||++|||++|+++.|+
T Consensus 246 ~~~~~~~~--~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 246 GLRPTIPE--D----CPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp CCCCCCCT--T----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCc--c----cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11112211 1 1234889999999999999999999999885
No 149
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-39 Score=341.01 Aligned_cols=252 Identities=23% Similarity=0.403 Sum_probs=206.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.++|++.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 367888999999999999999998899999999975432 2467899999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++.... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999986532 4588999999999999999999999 9999999999999999999999999999866432
Q ss_pred CC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 761 SS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 761 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
.. ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....+...........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~i~~~~~~~~~~~ 229 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFRLYKPRL 229 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCCCCCCTT
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--------HHHHHhcCCcCCCCcc
Confidence 11 1223456788999999998899999999999999999999 899987533221 1111111111111111
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.+++.+||+.||++||+++++++.|+
T Consensus 230 ---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 230 ---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1224889999999999999999999999874
No 150
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=345.31 Aligned_cols=246 Identities=22% Similarity=0.265 Sum_probs=193.8
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 679 (873)
++|++.++||+|+||+||+|+.. +|+.||||++......... ...+..|+..+.++ +||||++++++|.+.+..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 57999999999999999999876 7999999998765443332 34555666666555 899999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+ ++++.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 136 ~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred Eecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 9999 57888887543 24599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ...+.....+. ...
T Consensus 210 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-----------~~~~~~~~~~~--~~~ 274 (311)
T 3p1a_A 210 AG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-----------WQQLRQGYLPP--EFT 274 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-----------HHHHTTTCCCH--HHH
T ss_pred CC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHhccCCCc--ccc
Confidence 32 3344569999999998876 789999999999999999999776542211 11111111110 111
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
......+.+++.+||+.||++|||++|+++
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 112335889999999999999999999986
No 151
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.9e-39 Score=341.67 Aligned_cols=251 Identities=19% Similarity=0.288 Sum_probs=203.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec--ceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--RHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 678 (873)
.++|++.+.||+|+||.||+|+.. |+.||||+++..... ....+.+.+|+.+++.++||||+++++++.+. +..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC-HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 367889999999999999999986 889999999765322 23356799999999999999999999999876 77899
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCC--eeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP--IVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
||||+++|+|.+++.... ...+++..++.++.|++.|++|||++ + |+||||||+||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999997543 23589999999999999999999998 7 99999999999999999999999998764
Q ss_pred cCCCCCCccccccccccccccccccCCCCC---cchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTE---KCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
... ....||+.|+|||.+.+..++. ++||||+|+++|||++|+.||.......... ........+..+
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 233 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM----KVALEGLRPTIP 233 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH----HHHHSCCCCCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH----HHHhcCCCCCCC
Confidence 332 2346899999999998765544 7999999999999999999987543221111 111111112221
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. . ....+.+++.+||+.||++|||++++++.|+
T Consensus 234 ~--~----~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 234 P--G----ISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp T--T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C--C----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1 1 1224889999999999999999999999885
No 152
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.6e-40 Score=361.63 Aligned_cols=262 Identities=23% Similarity=0.249 Sum_probs=205.0
Q ss_pred HHHHHHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec
Q 039344 595 EEIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV 673 (873)
Q Consensus 595 ~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 673 (873)
.+.....++|++.+.||+|+||+||+|+.+ +|+.||+|++++.........+.+.+|..++..++||||+++++++.+.
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344445688999999999999999999875 7999999998642111111224478999999999999999999999999
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
+..|+||||+++|+|.+++.... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 99999999999999999996432 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccccccccccccc-------cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhh
Q 039344 754 AKFLKPDSSN-WTELAGTYGYVAPELAY-------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825 (873)
Q Consensus 754 a~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 825 (873)
++........ ....+||+.|+|||++. +..++.++||||+||++|||++|+.||............... ..
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~-~~ 287 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY-KE 287 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH-HH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhc-cc
Confidence 9877554332 23468999999999987 356899999999999999999999998754332211111110 00
Q ss_pred hhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCC---CCHHHHHH
Q 039344 826 EMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESR---PTMQKVCQ 869 (873)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ev~~ 869 (873)
. ..++.... .....+.+++.+||. +|++| |+++|+++
T Consensus 288 ~---~~~p~~~~---~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 288 H---LSLPLVDE---GVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp H---CCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred C---cCCCcccc---CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1 11111001 112347899999999 99998 68999875
No 153
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.1e-39 Score=340.65 Aligned_cols=253 Identities=20% Similarity=0.293 Sum_probs=203.3
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCc---chhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGE---MTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
++|++.+.||+|+||.||+|+.. +|+.||+|++....... ....+.+.+|+.+++.++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999876 68999999987543221 123578999999999999999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC----CeEEecccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN----EAHVSDFGI 753 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg~ 753 (873)
+||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999998643 4589999999999999999999999 999999999999999887 799999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
++...... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ....+......
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~ 229 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--------TLTNISAVNYD 229 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--------HHHHhHhcccC
Confidence 98765432 3344578999999999999999999999999999999999999987533211 11112122221
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.+..........+.+++.+||+.||++||+++|+++
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 111111122335889999999999999999999986
No 154
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.7e-39 Score=368.02 Aligned_cols=257 Identities=23% Similarity=0.295 Sum_probs=208.1
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|.+.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 67888999999999999999875 69999999986432222223467889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 681 EYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
||+++|+|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999986543 234689999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||......... ......+.......+...
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~----~~~~~~i~~~~~~~p~~~- 416 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN----KELKQRVLEQAVTYPDKF- 416 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH----HHHHHHHHHCCCCCCTTS-
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH----HHHHHHHhhcccCCCccc-
Confidence 544445568999999999999999999999999999999999999999754321110 111122222222222221
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCH-----HHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTM-----QKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 869 (873)
...+.+++.+||+.||++||++ +++++
T Consensus 417 ---s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 417 ---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ---CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ---CHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 2247899999999999999965 56653
No 155
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=350.35 Aligned_cols=246 Identities=20% Similarity=0.284 Sum_probs=203.1
Q ss_pred HhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcc-----hhHHHHHHHHHHHHhccCCceeeEEeEEEec
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEM-----TFQQEFLNEVKALTEIWHRNIVKVYGFCLHV 673 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 673 (873)
..++|++.+.||+|+||.||+|+. .+|+.||||++........ ...+.+.+|+.+++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 346799999999999999999975 5789999999876532211 1234577899999999999999999999999
Q ss_pred ceeEEEEEeccCC-ChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccc
Q 039344 674 RHLFIVYEYFKMC-SLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFG 752 (873)
Q Consensus 674 ~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 752 (873)
+..++||||+.+| ++.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 999988654 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCC
Q 039344 753 IAKFLKPDSSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831 (873)
Q Consensus 753 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (873)
+++...... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... .....
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~ 240 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAA 240 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTC
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhc
Confidence 998765443 3345679999999999988877 7899999999999999999999864221 11111
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQL 870 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 870 (873)
...+... ...+.+++.+||+.||++|||++++++.
T Consensus 241 ~~~~~~~----~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 IHPPYLV----SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred cCCCccc----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112111 1248899999999999999999999873
No 156
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-39 Score=344.50 Aligned_cols=257 Identities=24% Similarity=0.345 Sum_probs=205.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe--cceeE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH--VRHLF 677 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 677 (873)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+ ....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 367899999999999999999865 7899999999754332 2345779999999999999999999998854 56889
Q ss_pred EEEEeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCC-----eeeCCCCCCCeeeCCCCCeEEecc
Q 039344 678 IVYEYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPP-----IVHRDISSKNVLLDFENEAHVSDF 751 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----i~H~Dlk~~Nill~~~~~~kl~Df 751 (873)
+||||+++++|.+++.... ....+++..++.++.|++.|++|||+. + |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999997543 234589999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCC
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (873)
|.++.............|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......... ..+..+.
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~i~~~~ 232 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA--------GKIREGK 232 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--------HHHHHTC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHH--------HHHhhcc
Confidence 99987655433344567899999999999989999999999999999999999998754322111 1111111
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+..... ....+.+++.+||+.||++||+++|+++.+.
T Consensus 233 ~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 233 FRRIPYR---YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cccCCcc---cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 1111111 1224889999999999999999999998653
No 157
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.2e-39 Score=350.33 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=198.4
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcE----EEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEI----IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
++|++.+.||+|+||+||+|+.. +++. ||+|.+...... ...+.+.+|+.+++.++||||+++++++. .+..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC--SCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 67889999999999999999754 4544 788887543221 12356778999999999999999999986 5668
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 99999999999999986542 4589999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 757 LKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 757 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
...... ......+++.|+|||.+.+..++.++||||+||++|||+| |+.||........... .... ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~~~~--~~~~ 237 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL-----LEKG--ERLA 237 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH-----HHTT--CBCC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH-----HHcC--CCCC
Confidence 754432 2345567889999999999999999999999999999999 9999875433221111 1111 1111
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+... ...+.+++.+||+.||++||+++++++.|+
T Consensus 238 ~~~~~----~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 238 QPQIC----TIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CCTTB----CTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCCcC----cHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 113778999999999999999999999874
No 158
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.3e-39 Score=367.75 Aligned_cols=256 Identities=22% Similarity=0.254 Sum_probs=206.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467899999999999999999865 7999999998643211222246688999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999986543 23489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .....+.......+...
T Consensus 339 ~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~----~i~~~i~~~~~~~p~~~- 412 (576)
T 2acx_A 339 G-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE----EVERLVKEVPEEYSERF- 412 (576)
T ss_dssp T-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH----HHHHHHHHCCCCCCTTS-
T ss_pred C-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH----HHHHHhhcccccCCccC-
Confidence 3 23345689999999999999899999999999999999999999997543211100 01111111111111111
Q ss_pred HHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRP-----TMQKVCQ 869 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~ 869 (873)
...+.+++.+||+.||++|| +++|+++
T Consensus 413 ---s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 413 ---SPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 22478999999999999999 7888875
No 159
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=351.33 Aligned_cols=249 Identities=23% Similarity=0.385 Sum_probs=196.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccC--CceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH--RNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~l 678 (873)
.+.|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.+++.++| |||+++++++.+....++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 467999999999999999999988899999999875432 23345778999999999976 999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||| +.+++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 5678999998653 4589999999999999999999999 999999999999997 6889999999998765
Q ss_pred CCCC--Ccccccccccccccccccc-----------CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhh
Q 039344 759 PDSS--NWTELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825 (873)
Q Consensus 759 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 825 (873)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~ 231 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKLH 231 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-------HHHHH
Confidence 4432 2235679999999999865 67889999999999999999999998643221 01111
Q ss_pred hhcCCCCC--CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 826 EMLDPRLP--TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 826 ~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...++... .+... ...+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~----~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 232 AIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcCCcccCCcccC----CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 22222211 11111 124789999999999999999999976
No 160
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.2e-39 Score=353.90 Aligned_cols=266 Identities=21% Similarity=0.274 Sum_probs=206.0
Q ss_pred cCHHHHHHHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-----CCceee
Q 039344 592 IIYEEIIRATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-----HRNIVK 665 (873)
Q Consensus 592 ~~~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~ 665 (873)
+.+.+.....++|.+.+.||+|+||+||+|+. .+++.||||++.. .....+.+..|+.+++.+. ||||++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN----IKKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc----chhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34444445568899999999999999999986 4789999999863 2233567788999999996 999999
Q ss_pred EEeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC---
Q 039344 666 VYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF--- 742 (873)
Q Consensus 666 l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~--- 742 (873)
+++++...+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 999999999999999999 8999999875432 3489999999999999999999999 9999999999999975
Q ss_pred ----------------------CCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHH
Q 039344 743 ----------------------ENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEV 800 (873)
Q Consensus 743 ----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el 800 (873)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++||||+||++|||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 789999999999865432 2346789999999999999999999999999999999
Q ss_pred HhCCCCCcccccchhhhhhhh-------hh--------hhhhcC-----CCCCCCCchhHH--------------HHHHH
Q 039344 801 IKGKHPRDFISSMSFSSLNLN-------IA--------LDEMLD-----PRLPTPSRNVHD--------------KLISI 846 (873)
Q Consensus 801 ~tg~~P~~~~~~~~~~~~~~~-------~~--------~~~~~~-----~~~~~~~~~~~~--------------~~~~l 846 (873)
++|+.||.............. .. .....+ ..++........ ....+
T Consensus 253 l~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred HHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 999999975432211000000 00 000000 001111100000 01357
Q ss_pred HHHHhhcccCCCCCCCCHHHHHH
Q 039344 847 VEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 847 ~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.+++.+||+.||++|||++|+++
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHhcCChhhCCCHHHHhc
Confidence 79999999999999999999975
No 161
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.5e-39 Score=339.04 Aligned_cols=251 Identities=22% Similarity=0.395 Sum_probs=204.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.++|++.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|+++++.++||||+++++++. .+..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence 467889999999999999999998888999999875422 2477999999999999999999999986 45689999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999986532 23589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCC-CCCCCc
Q 039344 761 SS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPR-LPTPSR 837 (873)
Q Consensus 761 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 837 (873)
.. ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||........ ...+.... ...+..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~ 234 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--------IQNLERGYRMVRPDN 234 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCTT
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH--------HHHHhcccCCCCccc
Confidence 22 1223456788999999998889999999999999999999 9999875332211 11111111 111111
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.+++.+||+.||++|||++++++.|+
T Consensus 235 ----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 235 ----CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1234889999999999999999999999874
No 162
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9.4e-39 Score=344.31 Aligned_cols=257 Identities=24% Similarity=0.397 Sum_probs=203.2
Q ss_pred CCCCCceeeecCCeEEEEEEeC-----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec--ce
Q 039344 603 DFDDEHCIGKGGQGSVYMSKLA-----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV--RH 675 (873)
Q Consensus 603 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 675 (873)
.|++.+.||+|+||+||++.+. +|+.||||++.... .....+.+.+|+++++.++||||+++++++.+. ..
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 3488999999999999998642 68899999997542 233457799999999999999999999999874 67
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.++||||+++++|.+++... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 89999999999999998643 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccch-------hhhhhhhhhhh
Q 039344 756 FLKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMS-------FSSLNLNIALD 825 (873)
Q Consensus 756 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~-------~~~~~~~~~~~ 825 (873)
........ .....+++.|+|||.+.+..++.++||||+|+++|||+||+.||....... ...........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 77654322 234567888999999999889999999999999999999999987432110 00001111111
Q ss_pred hhcCC-CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 826 EMLDP-RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 826 ~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..... ..+.+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 263 ~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 263 LLERGERLPRPDK----CPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcccCCCCCcc----ccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111 1111111 1234889999999999999999999999875
No 163
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=337.67 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=199.6
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|.....||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 3455556999999999999985 5688999999875422 23577999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC-CCCeEEeccccccccCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF-ENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~~ 759 (873)
||+++++|.+++.........++..+..++.|++.|++|||++ +|+||||||+||+++. ++.+||+|||.++....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999997654444577889999999999999999999 9999999999999987 89999999999987765
Q ss_pred CCCCccccccccccccccccccCC--CCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
.........|++.|+|||.+.+.. ++.++||||||+++|||++|+.||.......... .. .......+..+. .
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~-~~~~~~~~~~~~--~ 250 (295)
T 2clq_A 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM--FK-VGMFKVHPEIPE--S 250 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH--HH-HHHHCCCCCCCT--T
T ss_pred CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH--Hh-hccccccccccc--c
Confidence 444444567899999999987654 7889999999999999999999986433221100 00 001111122221 1
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+.+++.+||+.||++||+++++++
T Consensus 251 ----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 251 ----MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1224789999999999999999999985
No 164
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.5e-39 Score=340.42 Aligned_cols=252 Identities=25% Similarity=0.372 Sum_probs=197.6
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|.+.+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc--hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 56889999999999999999764 6899999998764322 22578999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee---CCCCCeEEeccccccc
Q 039344 681 EYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAKF 756 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~~ 756 (873)
||+++++|.+++.... ....+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 9999999999886542 335689999999999999999999999 99999999999999 4567899999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......|++.|+|||.+. +.++.++||||+|+++|||++|+.||............ ....+......
T Consensus 177 ~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~------~~~~~~~~~~~ 248 (285)
T 3is5_A 177 FKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA------TYKEPNYAVEC 248 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCCC--
T ss_pred cCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh------ccCCccccccc
Confidence 6543 2334567899999999875 56889999999999999999999998754322111110 11111111111
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 249 ~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Cc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 1224789999999999999999999986
No 165
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.6e-39 Score=340.66 Aligned_cols=257 Identities=24% Similarity=0.404 Sum_probs=193.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
..+|++.+.||+|+||+||+|+.. ..||+|+++..... ....+.+.+|+.+++.++||||+++++++ .....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 467999999999999999999875 35999998765332 33457799999999999999999999975 456689999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999986443 4589999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCCccccccccccccccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCC
Q 039344 761 --SSNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTP 835 (873)
Q Consensus 761 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (873)
........||+.|+|||.+. +..++.++||||+|+++|||++|+.||........... ........+.....
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~ 250 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE---MVGRGSLSPDLSKV 250 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHH---HHHHTSCCCCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHH---HhcccccCcchhhc
Confidence 22234567899999999986 56688899999999999999999999875443211111 11111111211111
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.. .....+.+++.+||+.||++|||++++++.|+
T Consensus 251 ~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 251 RS---NCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cc---cCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 11 12235889999999999999999999999885
No 166
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-40 Score=356.38 Aligned_cols=257 Identities=22% Similarity=0.332 Sum_probs=187.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHh--ccCCceeeEEeEEEecc----
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTE--IWHRNIVKVYGFCLHVR---- 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~---- 674 (873)
.++|.+.+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++.. ++||||+++++++.+..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 367999999999999999999876 899999998642 13567788888877 79999999999998876
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHH--------hCCCCCeeeCCCCCCCeeeCCCCCe
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH--------NDCFPPIVHRDISSKNVLLDFENEA 746 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlk~~Nill~~~~~~ 746 (873)
..++||||+++|+|.+++... .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999543 4788899999999999999999 77 99999999999999999999
Q ss_pred EEeccccccccCCCCCC----ccccccccccccccccccC------CCCCcchhHHHHHHHHHHHhC----------CCC
Q 039344 747 HVSDFGIAKFLKPDSSN----WTELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHP 806 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDv~s~G~il~el~tg----------~~P 806 (873)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99999999766544332 1234799999999998776 345689999999999999999 555
Q ss_pred Ccccccch-hhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 807 RDFISSMS-FSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 807 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
|....... ...............+..+.... ..+....+.+++.+||+.||++|||++++++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 293 (303)
T 3gxj_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHhhcCCCcccccc-chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 54321110 00111111112222222222111 1244557999999999999999999999999985
No 167
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=343.51 Aligned_cols=264 Identities=23% Similarity=0.343 Sum_probs=199.8
Q ss_pred HhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCC--cchhHHHHHHHHHHHHhcc---CCceeeEEeEEEec
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPG--EMTFQQEFLNEVKALTEIW---HRNIVKVYGFCLHV 673 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 673 (873)
..++|++.+.||+|+||+||+|+. .+|+.||+|++...... .......+.+|+.+++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999985 57899999998643221 1112346677888777765 99999999999875
Q ss_pred c-----eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEE
Q 039344 674 R-----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748 (873)
Q Consensus 674 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl 748 (873)
. ..++||||+. ++|.+++..... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 5799999998 599998875442 3489999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhh---h
Q 039344 749 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIAL---D 825 (873)
Q Consensus 749 ~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~---~ 825 (873)
+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||................. .
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999876543 334556889999999999999999999999999999999999999975443211111110000 0
Q ss_pred -----------hhcCCCCCCCC-chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 826 -----------EMLDPRLPTPS-RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 826 -----------~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+..+.+. ....+....+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00000000000 000112235789999999999999999999986
No 168
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-39 Score=346.38 Aligned_cols=254 Identities=25% Similarity=0.396 Sum_probs=208.5
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
...+|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 4577999999999999999999876 5889999998743 2235789999999999999999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++++|.+++.... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 87 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999996533 24589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 759 PDSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 759 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... ......+++.|+|||.+.+..++.++||||+|+++|+|++ |..||.......... ......... .+.
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~-----~~~~~~~~~--~~~ 235 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-----LLEKDYRME--RPE 235 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-----HHHTTCCCC--CCT
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHhccCCCC--CCC
Confidence 4432 2233456788999999999999999999999999999999 999987543221111 111111111 111
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ....+.+++.+||+.||++|||++++++.|+
T Consensus 236 ~----~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 236 G----CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 1 1234889999999999999999999999874
No 169
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.9e-39 Score=351.64 Aligned_cols=261 Identities=22% Similarity=0.378 Sum_probs=208.9
Q ss_pred HHHHHHHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCc-----chhHHHHHHHHHHHHhc-cCCceeeE
Q 039344 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGE-----MTFQQEFLNEVKALTEI-WHRNIVKV 666 (873)
Q Consensus 594 ~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~l~~l-~h~niv~l 666 (873)
+.......++|++.+.||+|+||.||+|+.. +|+.||||++....... ....+.+.+|+.+++.+ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 4444455678999999999999999999875 79999999987543211 12245688999999999 79999999
Q ss_pred EeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCe
Q 039344 667 YGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA 746 (873)
Q Consensus 667 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~ 746 (873)
++++...+..++||||+++++|.+++... ..+++..+..++.||+.|++|||+. ||+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 99999999999999999999999998643 4589999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCCcccccccccccccccccc------CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhh
Q 039344 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNL 820 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~ 820 (873)
||+|||++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........
T Consensus 240 kl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~----- 313 (365)
T 2y7j_A 240 RLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM----- 313 (365)
T ss_dssp EECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----
T ss_pred EEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH-----
Confidence 99999999877643 33445689999999998863 3578899999999999999999999865332211
Q ss_pred hhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+..................+.+++.+||+.||++|||++|+++
T Consensus 314 ---~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 314 ---LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ---HHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---HHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111112221111111112335889999999999999999999986
No 170
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.4e-39 Score=354.65 Aligned_cols=261 Identities=19% Similarity=0.268 Sum_probs=198.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCC------CcEEEEEEccCCCCCcch--------hHHHHHHHHHHHHhccCCceeeE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLAS------GEIIAVKKFHSPLPGEMT--------FQQEFLNEVKALTEIWHRNIVKV 666 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l 666 (873)
..+|++.+.||+|+||.||+|+... ++.||||++......... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4689999999999999999998754 478999998654211000 01123445556667789999999
Q ss_pred EeEEEec----ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC-
Q 039344 667 YGFCLHV----RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD- 741 (873)
Q Consensus 667 ~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~- 741 (873)
++++... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9999875 4589999999 99999998653 24599999999999999999999999 999999999999999
Q ss_pred -CCCCeEEeccccccccCCCCCC-------ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc
Q 039344 742 -FENEAHVSDFGIAKFLKPDSSN-------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM 813 (873)
Q Consensus 742 -~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~ 813 (873)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876543221 13345999999999999999999999999999999999999999853221
Q ss_pred -hhh---hhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 814 -SFS---SLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 814 -~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
... ..........+.++.++... ....+.+++..||+.||++||+++++++.|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPAAN-----APGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCTTC-----CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhccccc-----CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 111 11111112222222211110 1224889999999999999999999999874
No 171
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.7e-38 Score=340.12 Aligned_cols=250 Identities=25% Similarity=0.399 Sum_probs=207.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.+.|++.+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 35689999999999999999975 47899999999755332 2357899999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999854 3589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNV 839 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (873)
.........|++.|+|||.+.+..++.++||||||+++|+|++|+.||.......... .......+..+. ..
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~--~~- 243 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-----LIPKNNPPTLEG--NY- 243 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCCCS--SC-
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-----HhhcCCCCCCcc--cc-
Confidence 5444456679999999999999999999999999999999999999987543221111 111111111111 11
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 039344 840 HDKLISIVEVTISCVDENPESRPTMQKVCQL 870 (873)
Q Consensus 840 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 870 (873)
...+.+++.+||+.||++|||++|+++.
T Consensus 244 ---~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 244 ---SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ---CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ---CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 2248899999999999999999999763
No 172
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-39 Score=354.78 Aligned_cols=252 Identities=25% Similarity=0.386 Sum_probs=191.3
Q ss_pred CCCCCceeeecCCeEEEEEEeC--CC--cEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe-cceeE
Q 039344 603 DFDDEHCIGKGGQGSVYMSKLA--SG--EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH-VRHLF 677 (873)
Q Consensus 603 ~~~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 677 (873)
.|.+.+.||+|+||+||+|+.. ++ ..||+|.+... ......+.|.+|+.++++++||||+++++++.+ .+..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4667789999999999999753 22 36899998753 233346789999999999999999999999764 45789
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||+++|+|.+++.... ..+++..+..++.||++|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 168 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999996533 3578999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC----CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 758 KPDSS----NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 758 ~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
..... ......+++.|+|||.+.+..++.++|||||||++|||+| |..||........... +.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~--------~~~~~~ 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY--------LLQGRR 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH--------HHTTCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH--------HHcCCC
Confidence 43321 1233457789999999999999999999999999999999 6777765433222111 111111
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....... ...+.+++.+||+.||++||+++|+++.|+
T Consensus 315 ~~~p~~~---~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 315 LLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 224889999999999999999999999874
No 173
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.9e-39 Score=368.32 Aligned_cols=253 Identities=24% Similarity=0.374 Sum_probs=208.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356899999999999999999865 7999999998765444344467899999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee---CCCCCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~~ 756 (873)
|||+.+++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 105 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 9999999999988654 3589999999999999999999999 99999999999999 5678999999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||....... ....+..+....+.
T Consensus 179 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~~~~ 248 (484)
T 3nyv_A 179 FEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--------ILKKVEKGKYTFEL 248 (484)
T ss_dssp BCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCS
T ss_pred cccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHcCCCCCCC
Confidence 7543 33455679999999999866 68999999999999999999999987543321 12222222322222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 222223345889999999999999999999975
No 174
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=346.16 Aligned_cols=252 Identities=26% Similarity=0.449 Sum_probs=197.9
Q ss_pred cCCCCCceeeecCCeEEEEEEeCC-----CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLAS-----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
.+|++.+.||+|+||.||+|+... +..||+|+++... .......+.+|+.+++.++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 567778999999999999997542 2459999997543 233356799999999999999999999999999999
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++++|.+++... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 9999999999999998643 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-C
Q 039344 757 LKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-R 831 (873)
Q Consensus 757 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~ 831 (873)
....... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....+.+. +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--------~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--------VMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHHCCCc
Confidence 6543221 123345788999999998899999999999999999999 999986433211 11122222 1
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+.+.. ....+.+++.+||+.||++||+++++++.|+
T Consensus 269 ~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 269 LPTPMD----CPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCCTT----CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCccc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 222221 1234889999999999999999999999874
No 175
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=345.44 Aligned_cols=263 Identities=25% Similarity=0.387 Sum_probs=198.6
Q ss_pred HHHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc--cCCceeeEEeEEEec--
Q 039344 598 IRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI--WHRNIVKVYGFCLHV-- 673 (873)
Q Consensus 598 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~-- 673 (873)
....++|++.+.||+|+||.||+|+.. |+.||||++... ....+..|.+++... +||||+++++++.+.
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 344578999999999999999999887 899999998532 134455666665554 899999999999887
Q ss_pred --ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC-----CCCeeeCCCCCCCeeeCCCCCe
Q 039344 674 --RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC-----FPPIVHRDISSKNVLLDFENEA 746 (873)
Q Consensus 674 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-----~~~i~H~Dlk~~Nill~~~~~~ 746 (873)
...++||||+++|+|.+++... .+++..++.++.|++.|++|||+++ .++|+||||||+||+++.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6889999999999999999543 4899999999999999999999762 2389999999999999999999
Q ss_pred EEeccccccccCCCCCCc----cccccccccccccccccCCCCCc------chhHHHHHHHHHHHhC----------CCC
Q 039344 747 HVSDFGIAKFLKPDSSNW----TELAGTYGYVAPELAYTMKVTEK------CDVYSFGVLALEVIKG----------KHP 806 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~------sDv~s~G~il~el~tg----------~~P 806 (873)
||+|||+++......... ....||+.|+|||++.+.....+ +|||||||++|||+|| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999998765433321 24579999999999987766655 9999999999999999 555
Q ss_pred Ccccccchhhhhhh-hhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 807 RDFISSMSFSSLNL-NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 807 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
|............. .........+..+.. ....+....+.+++.+||+.||++|||+.|+++.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNR-WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhhhccCcccccc-chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 44322111100011 111111112222211 112245567999999999999999999999999885
No 176
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.6e-39 Score=348.04 Aligned_cols=262 Identities=19% Similarity=0.285 Sum_probs=204.3
Q ss_pred HHHHHHHhcCCCCC-ceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEE
Q 039344 594 YEEIIRATNDFDDE-HCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFC 670 (873)
Q Consensus 594 ~~e~~~~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 670 (873)
++......+.|.+. +.||+|+||.||+|+.. +|+.||+|++....... .....+.+|+.+++.+ +||||+++++++
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 33344555667776 89999999999999765 68999999987643332 3357899999999999 579999999999
Q ss_pred EecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC---CCCeE
Q 039344 671 LHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF---ENEAH 747 (873)
Q Consensus 671 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~k 747 (873)
.+.+..++||||+++++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+|
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999986532 34589999999999999999999999 9999999999999998 78999
Q ss_pred EeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhh
Q 039344 748 VSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEM 827 (873)
Q Consensus 748 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 827 (873)
|+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........... ....
T Consensus 175 L~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-----i~~~ 248 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN-----ISQV 248 (327)
T ss_dssp ECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHHT
T ss_pred EeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH-----HHhc
Confidence 99999998765432 33446799999999999999999999999999999999999999875432211111 1111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 828 LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+..........+.+++.+||+.||++|||++++++
T Consensus 249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 249 ---NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ---CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 111111111112234789999999999999999999975
No 177
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.5e-39 Score=344.77 Aligned_cols=259 Identities=18% Similarity=0.336 Sum_probs=198.8
Q ss_pred cCCCCC-ceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEE
Q 039344 602 NDFDDE-HCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 602 ~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 678 (873)
+.|.+. +.||+|+||+||+|+. .+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 567774 7899999999999985 4799999999975422 2357789999999985 79999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC---eEEecccccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDFGIAK 755 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~Dfg~a~ 755 (873)
||||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++. +||+|||+++
T Consensus 89 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 99999999999998653 3589999999999999999999999 9999999999999998876 9999999997
Q ss_pred ccCCCCC-------Ccccccccccccccccccc-----CCCCCcchhHHHHHHHHHHHhCCCCCcccccc--hhhh----
Q 039344 756 FLKPDSS-------NWTELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSM--SFSS---- 817 (873)
Q Consensus 756 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~--~~~~---- 817 (873)
....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .|..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6543211 1224568999999999875 55889999999999999999999999754321 1110
Q ss_pred -hhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 818 -LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 818 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.......+..........+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0011122223333333222111122345889999999999999999999986
No 178
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=350.65 Aligned_cols=260 Identities=19% Similarity=0.256 Sum_probs=196.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcch--------hHHHHHHHHHHHHhccCCceeeEEe
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMT--------FQQEFLNEVKALTEIWHRNIVKVYG 668 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~ 668 (873)
.++|.+.+.||+|+||.||+|+.. ++..||+|++......... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999875 5788999998754221100 1134678888899999999999999
Q ss_pred EEEe----cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC
Q 039344 669 FCLH----VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN 744 (873)
Q Consensus 669 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~ 744 (873)
++.+ ....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9988 67899999999 999999986543 589999999999999999999999 999999999999999887
Q ss_pred --CeEEeccccccccCCCCC-------CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchh
Q 039344 745 --EAHVSDFGIAKFLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSF 815 (873)
Q Consensus 745 --~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~ 815 (873)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999987643221 12455799999999999999999999999999999999999999964221111
Q ss_pred hhhhhhhhhhhhcC----CCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 816 SSLNLNIALDEMLD----PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 816 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.............. ...+. . .....+.+++.+||+.||++||++++|++.|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAPS-G----SSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSCT-T----SCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred HHHHHHHhhcccccHHHHhhccc-c----ccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 00000000000000 00000 0 11224889999999999999999999999985
No 179
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1e-38 Score=353.15 Aligned_cols=248 Identities=23% Similarity=0.383 Sum_probs=197.4
Q ss_pred cCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc--CCceeeEEeEEEecceeEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW--HRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv 679 (873)
.+|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.+++.++ ||||+++++++...+..|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 56999999999999999999988899999999875433 2334578999999999996 59999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|| +.+++|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++....
T Consensus 135 ~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 6778999998654 3588999999999999999999999 999999999999996 68999999999987654
Q ss_pred CCC--Ccccccccccccccccccc-----------CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 760 DSS--NWTELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 760 ~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~~~ 279 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKLHA 279 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------HHHHHH
Confidence 332 2245679999999999865 36889999999999999999999998643211 011222
Q ss_pred hcCCCCC--CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 827 MLDPRLP--TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 827 ~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+.++... .+... ...+.+++.+||+.||++|||++|+++
T Consensus 280 ~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 280 IIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCccccCCCCccc----hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 2222221 11111 124789999999999999999999985
No 180
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1e-38 Score=360.60 Aligned_cols=258 Identities=20% Similarity=0.292 Sum_probs=195.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec------
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV------ 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 673 (873)
.++|++.+.||+|+||+||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 467999999999999999999754 689999999975422 233457789999999999999999999999654
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
...|+||||++++ +.+.+. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 3579999999865 544443 2388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh------------
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN------------ 821 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~------------ 821 (873)
|+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..............
T Consensus 211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 211 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp C-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9876543 334557899999999999999999999999999999999999999976432211100000
Q ss_pred --hhhhhhcCCC----------------CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 --IALDEMLDPR----------------LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 --~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.......... .+............+.+++.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0011111111 01111111222456899999999999999999999986
No 181
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8e-39 Score=339.26 Aligned_cols=248 Identities=23% Similarity=0.397 Sum_probs=204.5
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 67899999999999999999865 67899999986432112223467899999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 999999999998653 3589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||+....... ...+.......+...
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~~~~~~~~~~-- 235 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET--------HRRIVNVDLKFPPFL-- 235 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------HHHHHTTCCCCCTTS--
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH--------HHHHhccccCCCCcC--
Confidence 23346789999999999999999999999999999999999999875332211 112222222222211
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 841 DKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++||+++++++
T Consensus 236 --~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 236 --SDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 224789999999999999999999986
No 182
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.8e-39 Score=346.80 Aligned_cols=264 Identities=22% Similarity=0.361 Sum_probs=209.6
Q ss_pred HHHHHHHhcCCCCCceeeecCCeEEEEEEe------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeE
Q 039344 594 YEEIIRATNDFDDEHCIGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKV 666 (873)
Q Consensus 594 ~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 666 (873)
..+.....++|++.+.||+|+||+||+|+. .+++.||||+++... .....+.+.+|+.+++++ +||||+++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 444445568899999999999999999974 356899999997543 223356799999999999 79999999
Q ss_pred EeEEEecc-eeEEEEEeccCCChhhHhccccc-------------ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCC
Q 039344 667 YGFCLHVR-HLFIVYEYFKMCSLAVILSNDAA-------------AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRD 732 (873)
Q Consensus 667 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~D 732 (873)
++++...+ ..++||||+++++|.+++..... ...+++..++.++.|++.|++|||++ +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99998754 58999999999999999976442 12378899999999999999999999 999999
Q ss_pred CCCCCeeeCCCCCeEEeccccccccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcc
Q 039344 733 ISSKNVLLDFENEAHVSDFGIAKFLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 809 (873)
Q Consensus 733 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~ 809 (873)
|||+||+++.++.+||+|||+++........ .....||+.|+|||.+.+..++.++||||+|+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999876544332 234567889999999999999999999999999999998 9999875
Q ss_pred cccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 810 ISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
........ ....... ....+... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~~~~~~~----~~~~~~~--~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 254 VKIDEEFC----RRLKEGT--RMRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CCCSHHHH----HHHHHTC--CCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cchhHHHH----HHhccCc--cCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 43221110 0111111 11111111 224889999999999999999999999875
No 183
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=348.74 Aligned_cols=260 Identities=16% Similarity=0.255 Sum_probs=192.7
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|.+.+.||+|+||+||+|+.. +++.||+|++........ ...+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA--PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccccc--chhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 57889999999999999999875 789999999875422111 123557999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||++ +++.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9998 5888887643 24589999999999999999999999 9999999999999999999999999999876655
Q ss_pred CCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh----------------hh
Q 039344 761 SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN----------------IA 823 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~----------------~~ 823 (873)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.............. ..
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 555556688999999999876 5689999999999999999999999975432211110000 00
Q ss_pred hhhhcCCCCCCCC--chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 824 LDEMLDPRLPTPS--RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 824 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
......+...... .........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000001110000 000011235789999999999999999999976
No 184
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=337.45 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=203.0
Q ss_pred cCCCCCc-eeeecCCeEEEEEEeC---CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 602 NDFDDEH-CIGKGGQGSVYMSKLA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 602 ~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
++|.+.+ .||+|+||.||+|... +++.||+|+++... .....+.+.+|+++++.++||||+++++++ +.+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 4555555 8999999999999753 67889999997642 333467899999999999999999999999 556789
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||+++++|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 999999999999998643 24589999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 758 KPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 758 ~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
...... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||.......... .......+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~i~~~~~~~~- 234 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA-----FIEQGKRMEC- 234 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH-----HHHTTCCCCC-
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-----HHhcCCcCCC-
Confidence 544332 123456889999999988889999999999999999998 999987543321111 1111111111
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
+.. ....+.+++.+||+.||++||++.++++.|+
T Consensus 235 -~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 235 -PPE----CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp -CTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -CCC----cCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1234889999999999999999999999874
No 185
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1e-38 Score=341.99 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=201.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 467899999999999999999865 7999999999754222 235688999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee---CCCCCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~~ 756 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 85 MQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp ECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 9999999999988543 3589999999999999999999999 99999999999999 7788999999999975
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
... .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||........ ...+.......+.
T Consensus 159 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~i~~~~~~~~~ 228 (304)
T 2jam_A 159 EQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL--------FEKIKEGYYEFES 228 (304)
T ss_dssp CCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------HHHHHHCCCCCCT
T ss_pred cCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH--------HHHHHcCCCCCCc
Confidence 432 223445789999999999999999999999999999999999999864332111 1111111111111
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++||+++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111112235889999999999999999999976
No 186
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=348.03 Aligned_cols=266 Identities=21% Similarity=0.300 Sum_probs=199.0
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCc--chhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGE--MTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
....+|++.+.||+|+||.||+|+.. +|+.||||++....... ....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999865 68999999987543221 1112468899999999999999999999999999
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.++||||+++ ++.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 7887775432 4588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh-------hhhh
Q 039344 756 FLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA-------LDEM 827 (873)
Q Consensus 756 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~-------~~~~ 827 (873)
.............||+.|+|||.+.+. .++.++||||+||++|||++|..||................ ....
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 876555555667899999999998764 47899999999999999999999987544321111111100 0000
Q ss_pred ------cC-CCCCCCC--chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 039344 828 ------LD-PRLPTPS--RNVHDKLISIVEVTISCVDENPESRPTMQKVCQL 870 (873)
Q Consensus 828 ------~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 870 (873)
.. ...+... .........+.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000000 0001112458899999999999999999999863
No 187
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-38 Score=343.42 Aligned_cols=259 Identities=22% Similarity=0.342 Sum_probs=196.3
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 674 (873)
...++|.+.+.||+|+||.||+|+.. +++.||+|+++..... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 34577888999999999999999754 3458999998754332 233567999999999999999999999998755
Q ss_pred -----eeEEEEEeccCCChhhHhcccc---cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCe
Q 039344 675 -----HLFIVYEYFKMCSLAVILSNDA---AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA 746 (873)
Q Consensus 675 -----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~ 746 (873)
..++||||+++++|.+++.... ....+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3599999999999999985332 334689999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhh
Q 039344 747 HVSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIA 823 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~ 823 (873)
||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.........
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~------- 259 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY------- 259 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-------
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-------
Confidence 9999999987654322 1233457889999999999999999999999999999999 88998754432211
Q ss_pred hhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 824 LDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+........... ....+.+++.+||+.||++|||+.++++.|+
T Consensus 260 -~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 260 -DYLLHGHRLKQPED---CLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp -HHHHTTCCCCCBTT---CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHHcCCCCCCCcc---ccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111111111 1234889999999999999999999999875
No 188
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7e-39 Score=340.95 Aligned_cols=253 Identities=24% Similarity=0.373 Sum_probs=201.1
Q ss_pred hcCCCCCc-eeeecCCeEEEEEEe---CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEH-CIGKGGQGSVYMSKL---ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
..+|.+.+ .||+|+||.||+|.. .+++.||||+++.... .....+++.+|+.+++.++||||+++++++ +.+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 45677777 999999999999954 3468899999976432 233467899999999999999999999999 56778
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++++|.+++... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999999999653 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---cccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 757 LKPDSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 757 ~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
........ ....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......... ........+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~~~~ 241 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-----AMLEKGERMGC 241 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCCCCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCCCCC
Confidence 75543322 22346788999999988889999999999999999999 99998754322111 11111111111
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
+.. ....+.+++.+||+.||++||++.++++.|+
T Consensus 242 --~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 242 --PAG----CPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp --CTT----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred --CCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1234889999999999999999999999875
No 189
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8e-39 Score=346.48 Aligned_cols=262 Identities=17% Similarity=0.280 Sum_probs=192.9
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
...++|++.+.||+|+||+||+|+. .+|+.||||+++..... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 3457899999999999999999975 47899999999754322 223466789999999999999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC-----CCCCeEEeccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD-----FENEAHVSDFG 752 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-----~~~~~kl~Dfg 752 (873)
+||||++ ++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++ .++.+||+|||
T Consensus 110 lv~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 9999998 5898888644 3489999999999999999999999 999999999999994 44569999999
Q ss_pred cccccCCCCCCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh--------
Q 039344 753 IAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA-------- 823 (873)
Q Consensus 753 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~-------- 823 (873)
+++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||................
T Consensus 183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence 998776555555666789999999998875 48999999999999999999999997544321111100000
Q ss_pred -----hhhhcCCCCCC-CCchhHH-----HHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 824 -----LDEMLDPRLPT-PSRNVHD-----KLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 824 -----~~~~~~~~~~~-~~~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+. ...+. ....... ....+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWK-QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCC-TTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhh-hhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 00000 0000000 1235789999999999999999999986
No 190
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.2e-38 Score=338.22 Aligned_cols=258 Identities=18% Similarity=0.241 Sum_probs=197.9
Q ss_pred HhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEE-EecceeE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFC-LHVRHLF 677 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~ 677 (873)
..++|++.+.||+|+||.||+|+. .+++.||||++...... +.+.+|+.+++.++|++++..++++ .+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 457899999999999999999985 57899999987643222 3478899999999888777666665 5677889
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee---CCCCCeEEeccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIA 754 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a 754 (873)
+||||+ +++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 899999986432 3589999999999999999999999 99999999999999 78899999999999
Q ss_pred cccCCCCC-------CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhh
Q 039344 755 KFLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEM 827 (873)
Q Consensus 755 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 827 (873)
+....... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||....................
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc
Confidence 87654432 12346789999999999999999999999999999999999999976443211111111100111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 828 LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+. . .........+.+++.+||+.||++|||++++++.|+
T Consensus 236 ~~~~-~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 236 STPI-E---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HSCH-H---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cchh-h---hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 0000 0 000001234889999999999999999999999874
No 191
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.9e-39 Score=341.94 Aligned_cols=247 Identities=20% Similarity=0.394 Sum_probs=198.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CC-------cEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SG-------EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 672 (873)
.++|.+.+.||+|+||+||+|+.. ++ ..||+|++... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 367889999999999999999754 23 46999998643 22345789999999999999999999999999
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC-------
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE------- 745 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~------- 745 (873)
.+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999997543 3489999999999999999999999 9999999999999998887
Q ss_pred -eEEeccccccccCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCC-Ccccccchhhhhhhhh
Q 039344 746 -AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNI 822 (873)
Q Consensus 746 -~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P-~~~~~~~~~~~~~~~~ 822 (873)
+||+|||+++.... .....|++.|+|||.+.+ ..++.++||||+|+++|||++|..| |........ ..
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-----~~ 229 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-----LQ 229 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HH
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-----HH
Confidence 99999999975432 233567899999999987 6789999999999999999996554 432221110 00
Q ss_pred hhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.... ....+... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 230 ~~~~--~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 230 FYED--RHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHHT--TCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred Hhhc--cCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 0110 11111111 113789999999999999999999999885
No 192
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-38 Score=344.90 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=206.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-----CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEE--ec
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCL--HV 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~ 673 (873)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++. +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 36789999999999999999983 46889999998753 2333567999999999999999999999987 45
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
...++||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 66899999999999999996533 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhh-------hhhhhhh
Q 039344 754 AKFLKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFS-------SLNLNIA 823 (873)
Q Consensus 754 a~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~-------~~~~~~~ 823 (873)
++........ .....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......... .......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 9877544321 23346788899999999988999999999999999999999998643221000 0000111
Q ss_pred hhhhcCCC-CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 824 LDEMLDPR-LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 824 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
........ .+.+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 254 LELLEEGQRLPAPPA----CPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcccCCCCCCc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 111111 1234889999999999999999999999875
No 193
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=9.6e-39 Score=337.20 Aligned_cols=250 Identities=21% Similarity=0.342 Sum_probs=196.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+..++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367999999999999999999875 7999999998643222223356789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999998653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
. .......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+....... ...+.......+...
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~ 234 (276)
T 2h6d_A 164 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL--------FKKIRGGVFYIPEYL 234 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------HHHHHHCCCCCCTTS
T ss_pred C-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--------HHHhhcCcccCchhc
Confidence 3 22344578999999999987765 5899999999999999999999875332111 111111121112111
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.+++.+||+.||++|||++|+++
T Consensus 235 ----~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 235 ----NRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ----CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 124789999999999999999999986
No 194
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.3e-38 Score=338.04 Aligned_cols=257 Identities=18% Similarity=0.246 Sum_probs=200.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEE-EecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFC-LHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 678 (873)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .+.+.+|+.+++.++|++++..++++ .+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 46899999999999999999986 6799999999865422 24588999999999888766666655 56678899
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee---CCCCCeEEecccccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAK 755 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~ 755 (873)
||||+ +++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 99999 899999986332 4589999999999999999999999 99999999999999 478899999999998
Q ss_pred ccCCCCCC-------ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhc
Q 039344 756 FLKPDSSN-------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEML 828 (873)
Q Consensus 756 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 828 (873)
........ .....||+.|+|||.+.+..++.++||||+||++|||++|+.||.....................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS 236 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC
Confidence 76654321 23567899999999999999999999999999999999999999854322111111000000000
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+. + .........+.+++.+||+.||++|||++++++.|+
T Consensus 237 ~~~-~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 237 TPI-E---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp SCH-H---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred Cch-H---HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 000 0 000011234889999999999999999999999874
No 195
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=344.01 Aligned_cols=253 Identities=24% Similarity=0.437 Sum_probs=196.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcE----EEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEI----IAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
..+|++.+.||+|+||+||+|+.. +++. ||+|.+..... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS--CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 367999999999999999999854 4544 57777764322 233578999999999999999999999998755
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.++|+||+.+|++.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 789999999999999986543 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC--ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 756 FLKPDSSN--WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 756 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
........ .....+|+.|+|||.+.+..++.++||||+||++|||++ |+.||+.......... ... ....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~-----~~~--~~~~ 238 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEK--GERL 238 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-----HHT--TCCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHc--CCCC
Confidence 76543322 233456788999999999999999999999999999999 9999875443221111 111 1112
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
+.+... ...+.+++.+||+.||++||++.|+++.|+
T Consensus 239 ~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 239 PQPPIC----TIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 222221 224889999999999999999999999874
No 196
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.5e-38 Score=336.54 Aligned_cols=253 Identities=22% Similarity=0.366 Sum_probs=200.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCC----CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLAS----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
.++|.+.+.||+|+||.||+|+... +..||+|++.... .....+.+.+|+.+++.++||||+++++++.+ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence 4678999999999999999997542 3469999987542 23345789999999999999999999999865 456
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++++|.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 8999999999999998643 24589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCC
Q 039344 757 LKPDSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834 (873)
Q Consensus 757 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (873)
...... ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||........... .... ...+.
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-----~~~~--~~~~~ 235 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-----LEKG--DRLPK 235 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-----HHHT--CCCCC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-----HhcC--CCCCC
Confidence 654322 2234457889999999998899999999999999999998 9999874333221111 1111 11111
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
+... ...+.+++.+||+.||++||++.|+++.|+
T Consensus 236 ~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 236 PDLC----PPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 1111 224889999999999999999999999874
No 197
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.4e-38 Score=332.99 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=203.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 367899999999999999999865 7899999998654222 2357889999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+.....
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999998643 3589999999999999999999999 999999999999999999999999999986543
Q ss_pred CC--CCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC-CCC
Q 039344 760 DS--SNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL-PTP 835 (873)
Q Consensus 760 ~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 835 (873)
.. .......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||+........ ...+..... ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~~~~~ 230 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-------YSDWKEKKTYLNP 230 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-------HHHHHTTCTTSTT
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-------HHHhhhcccccCc
Confidence 22 22345678999999999987765 77899999999999999999999754322110 011111111 111
Q ss_pred CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 836 SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 836 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. .....+.+++.+||+.||++|||++|+++
T Consensus 231 ~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 WK---KIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp GG---GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hh---hcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 11 11234789999999999999999999975
No 198
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-38 Score=355.95 Aligned_cols=256 Identities=20% Similarity=0.276 Sum_probs=192.9
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCC-----cchhHHHHHHHHHHHHhccCCceeeEEeEEEe
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPG-----EMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 672 (873)
...++|.+.+.||+|+||+||+|.. .+++.||||++...... .......+.+|+.++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 3457899999999999999999976 46899999998643211 1111235889999999999999999999985
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC---CeEEe
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---EAHVS 749 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~~kl~ 749 (873)
.+..++||||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++ .+||+
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred cCceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 45579999999999999988643 4589999999999999999999999 999999999999997654 59999
Q ss_pred ccccccccCCCCCCcccccccccccccccccc---CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 750 DFGIAKFLKPDSSNWTELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 750 Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ....
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-------~~~~ 356 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-------LKDQ 356 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-------HHHH
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-------HHHH
Confidence 99999876533 33445679999999999864 5678899999999999999999999874332111 1111
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+..................+.+++.+||+.||++|||++|+++
T Consensus 357 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1222222221111122345889999999999999999999986
No 199
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=371.25 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=197.5
Q ss_pred CCCCc-eeeecCCeEEEEEEeC---CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 604 FDDEH-CIGKGGQGSVYMSKLA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 604 ~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
+.+.+ .||+|+||.||+|... ++..||||+++.... ....++|.+|+++++.++|||||+++++|.+ +..++|
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS--STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 33344 7999999999999763 466799999976432 2336789999999999999999999999976 568999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 414 ~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 9999999999999653 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCc---cccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-CCCC
Q 039344 760 DSSNW---TELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-RLPT 834 (873)
Q Consensus 760 ~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 834 (873)
..... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||......... ..+..+ +...
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~--------~~i~~~~~~~~ 560 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM--------AFIEQGKRMEC 560 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH--------HHHHTTCCCCC
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH--------HHHHcCCCCCC
Confidence 33222 22345688999999999999999999999999999998 99998754432211 111111 1222
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
+.. ....+.+++.+||+.||++||++++|++.|+
T Consensus 561 p~~----~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 561 PPE----CPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp CTT----CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred CCc----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 221 1234889999999999999999999999875
No 200
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-38 Score=364.01 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=203.9
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCc----------chhHHHHHHHHHHHHhccCCceeeEEe
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGE----------MTFQQEFLNEVKALTEIWHRNIVKVYG 668 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~l~~ 668 (873)
..++|.+.+.||+|+||+||+|+.. +++.||+|++....... ....+.+.+|+.+++.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999865 68899999987543221 123577999999999999999999999
Q ss_pred EEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC---C
Q 039344 669 FCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN---E 745 (873)
Q Consensus 669 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~ 745 (873)
++.+.+..++||||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999888543 4589999999999999999999999 999999999999999876 6
Q ss_pred eEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhh
Q 039344 746 AHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825 (873)
Q Consensus 746 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 825 (873)
+||+|||+++..... .......||+.|+|||++. +.++.++||||+||++|+|++|+.||...... ....
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~ 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DIIK 257 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHH
Confidence 999999999876543 3344567999999999976 46899999999999999999999998753322 1222
Q ss_pred hhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 826 EMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.+..+....+..........+.+++.+||+.||.+|||++|+++
T Consensus 258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 22223332222211222345889999999999999999999975
No 201
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-38 Score=364.38 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=203.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||+||+|+.. +|+.||||++....... ...+.+.+|++++++++||||+++++++.+....|+|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 367999999999999999999865 78999999986432111 1257789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC---CCCCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD---FENEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~---~~~~~kl~Dfg~a~~ 756 (873)
|||+++++|.+.+... ..+++..+..++.|++.|++|||++ +|+||||||+||+++ .++.+||+|||+++.
T Consensus 100 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999888543 3589999999999999999999999 999999999999995 456799999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||....... ....+..+......
T Consensus 174 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~~~~ 243 (486)
T 3mwu_A 174 FQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--------ILKRVETGKYAFDL 243 (486)
T ss_dssp BCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCCCSCS
T ss_pred CCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCCCCC
Confidence 6543 33445679999999999875 58999999999999999999999987543221 12222222222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++|||+.++++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 222223345889999999999999999999986
No 202
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=338.16 Aligned_cols=251 Identities=27% Similarity=0.422 Sum_probs=201.9
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
..++|++.+.||+|+||.||+|... +|+.||+|++.... . .+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--D---LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--C---CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--H---HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 3577999999999999999999865 58999999987532 1 3678999999999999999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++...
T Consensus 102 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999998532 34589999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCch
Q 039344 759 PDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRN 838 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (873)
..........|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......... ........+....+..
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 250 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-----FMIPTNPPPTFRKPEL- 250 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCSSGGG-
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhcCCCcccCCccc-
Confidence 5544455567999999999999999999999999999999999999998754322111 0111111112211111
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 839 VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 839 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+.+++.+||+.||++|||+.++++
T Consensus 251 ---~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 251 ---WSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---SCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1234889999999999999999999975
No 203
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.8e-38 Score=339.13 Aligned_cols=254 Identities=25% Similarity=0.370 Sum_probs=199.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCC----CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe-cce
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLAS----GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH-VRH 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 675 (873)
...|++.+.||+|+||+||+|+..+ +..||+|.+... ......+.+.+|+.++++++||||+++++++.+ .+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 3568888999999999999997542 236899998753 233345779999999999999999999999754 567
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.++||||+++++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 899999999999999996532 4588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC
Q 039344 756 FLKPDSS----NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP 830 (873)
Q Consensus 756 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 830 (873)
....... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||......... ......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~--------~~~~~~ 248 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT--------VYLLQG 248 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH--------HHHHTT
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH--------HHHhcC
Confidence 6644321 2234567889999999999999999999999999999999 55565543322211 111111
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
......... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 249 ~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 249 RRLLQPEYC---PDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111111 124889999999999999999999999885
No 204
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-38 Score=345.39 Aligned_cols=262 Identities=21% Similarity=0.367 Sum_probs=199.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 367899999999999999999875 58999999986543 2333456688999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||++++++.++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999998876433 3489999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhh----------------hh
Q 039344 760 DSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNL----------------NI 822 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~----------------~~ 822 (873)
.........|++.|+|||.+.+. .++.++||||+||++|||++|+.||............. ..
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 55555567899999999998875 68999999999999999999999997544321110000 00
Q ss_pred hhhhhcCCCCCCCCch---hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 823 ALDEMLDPRLPTPSRN---VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 823 ~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.......+........ .......+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0011111111111100 0112345889999999999999999999875
No 205
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.9e-38 Score=343.67 Aligned_cols=261 Identities=22% Similarity=0.322 Sum_probs=204.9
Q ss_pred HHHHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHh--ccCCceeeEEeEEEecc
Q 039344 597 IIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTE--IWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 597 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~ 674 (873)
.....++|.+.+.||+|+||.||+|+.. |+.||||++... ..+.+.+|+++++. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3445678999999999999999999885 899999998632 24677889999887 68999999999998775
Q ss_pred ----eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHH--------hCCCCCeeeCCCCCCCeeeCC
Q 039344 675 ----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH--------NDCFPPIVHRDISSKNVLLDF 742 (873)
Q Consensus 675 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlk~~Nill~~ 742 (873)
..++||||+++|+|.+++... .+++.+++.++.|++.|++||| +. +|+||||||+||+++.
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred CccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 789999999999999999642 4899999999999999999999 77 9999999999999999
Q ss_pred CCCeEEeccccccccCCCCCC----ccccccccccccccccccC------CCCCcchhHHHHHHHHHHHhC---------
Q 039344 743 ENEAHVSDFGIAKFLKPDSSN----WTELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG--------- 803 (873)
Q Consensus 743 ~~~~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDv~s~G~il~el~tg--------- 803 (873)
++.+||+|||+++........ .....||+.|+|||.+.+. .++.++|||||||++|||+||
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 999999999999876554332 2345789999999998765 234689999999999999999
Q ss_pred -CCCCcccccchhh-hhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 804 -KHPRDFISSMSFS-SLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 804 -~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..||......... .............+.++... ...+....+.+++.+||+.||++|||+++|++.|+
T Consensus 263 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 263 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cccCccccCcCcccHHHHHHHHHHHHhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 6676543221110 01111111222222222111 11244557899999999999999999999999875
No 206
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.2e-39 Score=370.01 Aligned_cols=252 Identities=26% Similarity=0.436 Sum_probs=206.1
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
..++|++.+.||+|+||.||+|+..++..||||+++.... ..++|.+|++++++++||||+++++++.+ +..++|
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 4567888999999999999999998888899999975422 24689999999999999999999999876 678999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999999996532 24589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-CCCCCC
Q 039344 760 DSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-RLPTPS 836 (873)
Q Consensus 760 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 836 (873)
... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||........ ...+... +.+.+.
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~--------~~~i~~~~~~~~~~ 487 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------LDQVERGYRMPCPP 487 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCT
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC
Confidence 211 1123456788999999999999999999999999999999 9999875432211 1111111 222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
. ....+.+++.+||+.||++|||+++|++.|+
T Consensus 488 ~----~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 488 E----CPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 1234889999999999999999999999885
No 207
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.7e-38 Score=336.12 Aligned_cols=247 Identities=22% Similarity=0.317 Sum_probs=199.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 678 (873)
.++|++.+.||+|+||+||+|+.. +++.||+|++....... ....++.+|+..+..+ +||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 467999999999999999999875 79999999997653333 2357788999999999 99999999999999999999
Q ss_pred EEEeccCCChhhHhccccc-ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC-------------
Q 039344 679 VYEYFKMCSLAVILSNDAA-AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN------------- 744 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~------------- 744 (873)
||||+++++|.+++..... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999975432 24589999999999999999999999 999999999999998544
Q ss_pred ------CeEEeccccccccCCCCCCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhh
Q 039344 745 ------EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSS 817 (873)
Q Consensus 745 ------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~ 817 (873)
.+||+|||.++...... ...||+.|+|||.+.+. .++.++||||+||++|||++|..|+.....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----- 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----- 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-----
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-----
Confidence 79999999998765432 24589999999998766 566899999999999999999987542211
Q ss_pred hhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 818 LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.....+...... ...+.+++.+||+.||++|||++|+++
T Consensus 237 ------~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 ------WHEIRQGRLPRIPQVL---SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ------HHHHHTTCCCCCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------HHHHHcCCCCCCCccc---CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111122221111111 224889999999999999999999986
No 208
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3e-39 Score=356.80 Aligned_cols=245 Identities=13% Similarity=0.112 Sum_probs=191.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHH---HHHhccCCceeeEE-------eE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVK---ALTEIWHRNIVKVY-------GF 669 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~niv~l~-------~~ 669 (873)
.++|.+.+.||+|+||+||+|+. .+|+.||||++...........+.+.+|+. .++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999985 569999999997554444445678999995 55555899999998 77
Q ss_pred EEecc-----------------eeEEEEEeccCCChhhHhccccc----ccCCChHHHHHHHHHHHHHHHHHHhCCCCCe
Q 039344 670 CLHVR-----------------HLFIVYEYFKMCSLAVILSNDAA----AKNLGWTRRMNMIKGIVDALSYMHNDCFPPI 728 (873)
Q Consensus 670 ~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 728 (873)
+.+.+ ..|+||||+ +|+|.+++..... ...+++..++.++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 66553 278999999 5899999975431 11233588889999999999999999 99
Q ss_pred eeCCCCCCCeeeCCCCCeEEeccccccccCCCCCCccccccccccccccccccC-----------CCCCcchhHHHHHHH
Q 039344 729 VHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM-----------KVTEKCDVYSFGVLA 797 (873)
Q Consensus 729 ~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~sDv~s~G~il 797 (873)
+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999998643 23345567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 798 LEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 798 ~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
|||++|+.||........ ...+.... +. ....+.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~--------~~~~~~~~-~~-------~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGG--------SEWIFRSC-KN-------IPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CC--------SGGGGSSC-CC-------CCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccc--------hhhhhhhc-cC-------CCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999864332211 11111111 11 1124789999999999999999999986
No 209
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.7e-38 Score=363.34 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=199.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.+.|++.+.||+|+||+||+|+.. +++.||+|++........ ....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C-TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 356999999999999999999865 789999999876432222 246789999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC---CCeEEeccccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE---NEAHVSDFGIAKF 756 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~kl~Dfg~a~~ 756 (873)
|||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.. +.+||+|||+++.
T Consensus 115 ~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999888543 3589999999999999999999999 99999999999999764 4599999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPS 836 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (873)
.... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||....... ....+..+......
T Consensus 189 ~~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 189 FENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--------ILRKVEKGKYTFDS 258 (494)
T ss_dssp CBTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCCCCCS
T ss_pred CCCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCCCCc
Confidence 6543 2344567999999999876 569999999999999999999999987543321 12222222222222
Q ss_pred chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 837 RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 837 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.........+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 222222345889999999999999999999875
No 210
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-38 Score=375.77 Aligned_cols=252 Identities=21% Similarity=0.277 Sum_probs=209.2
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 677 (873)
..++|++.+.||+|+||.||+|+.. +++.||||+++..........+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999865 6889999998743211122246688899999887 7999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 999999999999998654 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCc
Q 039344 758 KPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSR 837 (873)
Q Consensus 758 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (873)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 564 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPKS 564 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHSSCCCCCTT
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCCCCcc
Confidence 5555556677899999999999999999999999999999999999999875332 22233344444433332
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCH-----HHHHH
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTM-----QKVCQ 869 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 869 (873)
. ...+.+++.+||+.||++||++ +||++
T Consensus 565 ~----s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 565 M----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp S----CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred C----CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 2 2247899999999999999997 66653
No 211
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=353.68 Aligned_cols=320 Identities=22% Similarity=0.245 Sum_probs=187.6
Q ss_pred ceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccccc
Q 039344 48 ATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNN 127 (873)
Q Consensus 48 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 127 (873)
+.++.++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 34555555555 4444432 34555555555555444555555555555555555555444444555555555555555
Q ss_pred ccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCc
Q 039344 128 ILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPS 207 (873)
Q Consensus 128 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 207 (873)
.++ .+.+..|.++++|++|+|++|++++..+..|..+++|++|++++|.+++..+.
T Consensus 91 ~l~------------------------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 91 RLK------------------------LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCC------------------------SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred cCC------------------------ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 444 44444444444455555555554444444455555555555555555544444
Q ss_pred cccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcC-cCCcCCCCCCC
Q 039344 208 ELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILRNLTSL 286 (873)
Q Consensus 208 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~l~~l~~L 286 (873)
.|.++++|++|++++|++++..+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+ ..+......+|
T Consensus 147 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 147 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 55555555555555555554444445555555555555555555555555555666666666555443 22233334467
Q ss_pred CeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCC
Q 039344 287 ERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSN 366 (873)
Q Consensus 287 ~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N 366 (873)
++|++++|.++.++...|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 77777777777666666777777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccCCCCCccccccccccEEEecCccccC
Q 039344 367 HIVGEIPIELGKLNFFIKLVLAHNQLSG 394 (873)
Q Consensus 367 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 394 (873)
.|++..+..+..+++|+.|++++|.+..
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccC
Confidence 7775555556666666677777666654
No 212
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=355.81 Aligned_cols=318 Identities=22% Similarity=0.212 Sum_probs=208.3
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTN 103 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (873)
+.++.++++++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..|.+|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 46777777776 5665543 57777777777777777777777777777777777777777777777777888888777
Q ss_pred ccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCc
Q 039344 104 SLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPP 183 (873)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 183 (873)
+++...+..|.++++|++|+|++|.+++..+..|..+++|++|++++|.+..+.+..|.++++|++|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77765555677777777777777777766677777777777777777777777777777777777777777777766556
Q ss_pred cccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCC
Q 039344 184 SLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKL 263 (873)
Q Consensus 184 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 263 (873)
.|..+++|+.|++++|.+++..+..|..+++|++|++++|...+..+.......+|++|++++|+++...+..|..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 67777777777777777776666677777777777777776655555555555567777777777765554556666666
Q ss_pred cEEEccCCcCcCcCC-cCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccc
Q 039344 264 TILLLGHNQFRGPIP-ILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSIN 342 (873)
Q Consensus 264 ~~L~L~~N~l~~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 342 (873)
+.|+|++|++.+..+ .+..+++|++|+|++|.++++.+..|..+++|++|+|++|++++..+..|..+++|+.|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 666666666554222 3444444444444444444444444444444444444444444333333333444444444444
Q ss_pred cC
Q 039344 343 NI 344 (873)
Q Consensus 343 ~i 344 (873)
.+
T Consensus 331 ~l 332 (477)
T 2id5_A 331 PL 332 (477)
T ss_dssp CE
T ss_pred Cc
Confidence 33
No 213
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.5e-38 Score=344.34 Aligned_cols=256 Identities=24% Similarity=0.347 Sum_probs=201.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEe------CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL------ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 674 (873)
.++|++.+.||+|+||.||+|+. .+++.||||++.... .......+.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 46799999999999999999973 357789999997432 2334567899999999999999999999999999
Q ss_pred eeEEEEEeccCCChhhHhccccc----ccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC---CCeE
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAA----AKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE---NEAH 747 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~k 747 (873)
..++||||+++++|.+++..... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.+ ..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999975432 23488999999999999999999999 99999999999999954 4699
Q ss_pred EeccccccccCCCCC--CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhh
Q 039344 748 VSDFGIAKFLKPDSS--NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIAL 824 (873)
Q Consensus 748 l~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~ 824 (873)
|+|||+++....... ......|++.|+|||.+.+..++.++||||+|+++|||+| |+.||....... ..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~ 255 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--------VL 255 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--------HH
Confidence 999999976543322 2234567899999999999999999999999999999998 999987433221 11
Q ss_pred hhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 825 DEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+........... ....+.+++.+||+.||++||+++++++.|+
T Consensus 256 ~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 256 EFVTSGGRMDPPKN---CPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHTTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcCCCCCCCCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11111111111111 1224889999999999999999999999874
No 214
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=341.78 Aligned_cols=253 Identities=25% Similarity=0.393 Sum_probs=195.9
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEe----
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLH---- 672 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 672 (873)
...++|++.+.||+|+||.||+|+. .+|+.||+|++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3467899999999999999999986 4789999999875322 236788999999999 89999999999987
Q ss_pred --cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEec
Q 039344 673 --VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSD 750 (873)
Q Consensus 673 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~D 750 (873)
.+..++||||+++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 467899999999999999997543 34589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCCccccccccccccccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhh
Q 039344 751 FGIAKFLKPDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825 (873)
Q Consensus 751 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 825 (873)
||++..............|++.|+|||++. +..++.++||||+||++|+|++|+.||.......... ...
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~ 247 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-----LIP 247 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHH
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-----Hhh
Confidence 999987654433444567999999999987 5668899999999999999999999986543221110 011
Q ss_pred hhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 826 EMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+.... ... ...+.+++.+||+.||++||+++++++
T Consensus 248 ~~~~~~~~~-~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RNPAPRLKS-KKW----SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSCCCCCSC-SCS----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCccccCCc-ccc----CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111111 111 224889999999999999999999986
No 215
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.3e-38 Score=336.44 Aligned_cols=247 Identities=28% Similarity=0.424 Sum_probs=195.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec-ceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV-RHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv 679 (873)
.++|++.+.||+|+||+||+|+.. |+.||||+++... ..+.+.+|+.+++.++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 467899999999999999999886 8899999987432 247799999999999999999999997654 478999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++.... ...+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999999986543 22378999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCC-CCCCCCc
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDP-RLPTPSR 837 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 837 (873)
. .....+++.|+|||.+.+..++.++||||+|+++|||+| |+.||........ ...+... ....+..
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~ 238 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--------VPRVEKGYKMDAPDG 238 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--------HHHHTTTCCCCCCTT
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHhcCCCCCCccc
Confidence 2 223467889999999999999999999999999999998 9999875432211 1111111 1111111
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 838 NVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 838 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.+++.+||+.||++||++.|+++.|+
T Consensus 239 ----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 239 ----CPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 1234889999999999999999999999875
No 216
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.1e-39 Score=352.23 Aligned_cols=257 Identities=9% Similarity=0.026 Sum_probs=185.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc--cCCceeeEE-------eEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI--WHRNIVKVY-------GFC 670 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~ 670 (873)
..+|.+.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999864 7899999999876544444566788886666555 599988755 555
Q ss_pred Eec-----------------ceeEEEEEeccCCChhhHhcccccccCCChHHH------HHHHHHHHHHHHHHHhCCCCC
Q 039344 671 LHV-----------------RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRR------MNMIKGIVDALSYMHNDCFPP 727 (873)
Q Consensus 671 ~~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~~~~ 727 (873)
... ...|+||||++ |+|.+++.... ..+++..+ ..++.||+.||+|||++ +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 433 34799999999 89999997643 23456666 78889999999999999 9
Q ss_pred eeeCCCCCCCeeeCCCCCeEEeccccccccCCCCCCcccccccccccccccccc--CCCCCcchhHHHHHHHHHHHhCCC
Q 039344 728 IVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKH 805 (873)
Q Consensus 728 i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDv~s~G~il~el~tg~~ 805 (873)
|+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999986542 2224567799999999987 678999999999999999999999
Q ss_pred CCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 806 PRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 806 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
||............ ..............+. .......+.+++.+||+.||++|||++++++
T Consensus 292 Pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGSWK-RPSLRVPGTDSLAFGS--CTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTCCC-BCCTTSCCCCSCCCTT--SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccchh-hhhhhhccccccchhh--ccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99754322110000 0000011111111110 0112234889999999999999999999875
No 217
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=345.36 Aligned_cols=261 Identities=25% Similarity=0.356 Sum_probs=195.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHH--HHhccCCceeeEEeEEEe-----c
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA--LTEIWHRNIVKVYGFCLH-----V 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~ 673 (873)
.++|++.+.||+|+||.||+|+. +++.||||++... ..+.+..|.++ +..++||||+++++++.. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc------chhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46799999999999999999987 4899999998632 13444555555 445799999999987653 2
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC------CCCeeeCCCCCCCeeeCCCCCeE
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC------FPPIVHRDISSKNVLLDFENEAH 747 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------~~~i~H~Dlk~~Nill~~~~~~k 747 (873)
...++||||+++|+|.+++.... .++..+..++.|++.||+|||+.. .++|+||||||+||+++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 35789999999999999985432 588999999999999999999873 23899999999999999999999
Q ss_pred EeccccccccCCCC--------CCcccccccccccccccccc-------CCCCCcchhHHHHHHHHHHHhCCCCCccccc
Q 039344 748 VSDFGIAKFLKPDS--------SNWTELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIKGKHPRDFISS 812 (873)
Q Consensus 748 l~Dfg~a~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~sDv~s~G~il~el~tg~~P~~~~~~ 812 (873)
|+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765321 12234579999999999876 4567789999999999999999877643221
Q ss_pred ch-hhh-------------hhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 813 MS-FSS-------------LNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 813 ~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.. +.. ............+.++............+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 10 000 0000011111223333322222334556999999999999999999999999875
No 218
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-38 Score=353.67 Aligned_cols=203 Identities=27% Similarity=0.424 Sum_probs=164.1
Q ss_pred HhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEEecc--e
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVR--H 675 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 675 (873)
..++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.+++.+. ||||+++++++...+ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 457899999999999999999975 47899999998754332 234567889999999997 999999999997544 6
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.|+||||++ ++|..++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999998 588888754 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC---------------------CCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccc
Q 039344 756 FLKPD---------------------SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFIS 811 (873)
Q Consensus 756 ~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~ 811 (873)
..... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65431 112344689999999999876 678999999999999999999999997544
No 219
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.9e-38 Score=343.64 Aligned_cols=253 Identities=23% Similarity=0.386 Sum_probs=200.4
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcE--EEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEI--IAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 677 (873)
++|++.+.||+|+||.||+|+.. +|.. ||+|.+..... ....+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc--hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 67899999999999999999764 5664 49998875322 22346789999999999 8999999999999999999
Q ss_pred EEEEeccCCChhhHhcccc-------------cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC
Q 039344 678 IVYEYFKMCSLAVILSNDA-------------AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN 744 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~ 744 (873)
+||||+++++|.+++.... ....+++.+++.++.|++.|++|||++ +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997643 234689999999999999999999999 999999999999999999
Q ss_pred CeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhh
Q 039344 745 EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIA 823 (873)
Q Consensus 745 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~ 823 (873)
.+||+|||+++..... .......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||........
T Consensus 180 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~-------- 250 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-------- 250 (327)
T ss_dssp CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------
T ss_pred eEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--------
Confidence 9999999999754322 12233456889999999998889999999999999999998 9999875432211
Q ss_pred hhhhcCC-CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 824 LDEMLDP-RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 824 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
...+... ....+.. ....+.+++.+||+.||++|||++|+++.|+
T Consensus 251 ~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 251 YEKLPQGYRLEKPLN----CDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHGGGTCCCCCCTT----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcCCCCCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 1111111 1234889999999999999999999999874
No 220
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-38 Score=336.00 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=198.4
Q ss_pred CCCCCceeeecCCeEEEEEEeC-C---CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee-E
Q 039344 603 DFDDEHCIGKGGQGSVYMSKLA-S---GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL-F 677 (873)
Q Consensus 603 ~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~ 677 (873)
.|...+.||+|+||+||+|+.. + +..||+|++... ......+.+.+|+.+++.++||||+++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4566789999999999999753 2 237999998753 2333467899999999999999999999999876654 9
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||+.+++|.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 999999999999999653 24588999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC----CCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-CcccccchhhhhhhhhhhhhhcCC-C
Q 039344 758 KPDS----SNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISSMSFSSLNLNIALDEMLDP-R 831 (873)
Q Consensus 758 ~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P-~~~~~~~~~~~~~~~~~~~~~~~~-~ 831 (873)
.... .......+++.|+|||.+.+..++.++||||+|+++|+|++|..| |......... ..+... .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~--------~~~~~~~~ 246 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT--------HFLAQGRR 246 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH--------HHHHTTCC
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH--------HHhhcCCC
Confidence 4321 222345678899999999999999999999999999999996655 4322221111 111111 1
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+.+... ...+.+++.+||+.||++|||++++++.|+
T Consensus 247 ~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 247 LPQPEYC----PDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCccc----hHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 224889999999999999999999999874
No 221
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=340.64 Aligned_cols=257 Identities=21% Similarity=0.340 Sum_probs=200.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe----cce
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH----VRH 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 675 (873)
.++|++.+.||+|+||.||+|+. .+|+.||+|++... .....+.+.+|+++++.++||||+++++++.. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 46799999999999999999986 57999999998642 23345779999999999999999999999973 447
Q ss_pred eEEEEEeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
.++||||+++++|.+++.... ....+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999987532 235689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCC---------ccccccccccccccccccCC---CCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhh
Q 039344 755 KFLKPDSSN---------WTELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNI 822 (873)
Q Consensus 755 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~ 822 (873)
+........ .....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||+...... .....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG---DSVAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT---SCHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc---chhhH
Confidence 765422111 12345799999999987554 6889999999999999999999986421110 00000
Q ss_pred hhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.... ....+.... ....+.+++.+||+.||++||+++++++.|+
T Consensus 259 ~~~~--~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 259 AVQN--QLSIPQSPR----HSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHC--C--CCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Hhhc--cCCCCcccc----CCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 1111 111111111 1234889999999999999999999999874
No 222
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=346.29 Aligned_cols=256 Identities=20% Similarity=0.313 Sum_probs=195.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc-----
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR----- 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 674 (873)
..+|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 46799999999999999999986 4799999999976433 2334577899999999999999999999997653
Q ss_pred -eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 675 -HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 675 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
..|+||||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7899998864 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh-----------
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN----------- 821 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~----------- 821 (873)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 175 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 175 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 987543 2344678999999999877 6789999999999999999999999975443211110000
Q ss_pred --------hhhhhhcCCCCCCC-CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 --------IALDEMLDPRLPTP-SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 --------~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...... ....... ..........+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 252 RLQSDEAKNYMKGL-PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp TCSCHHHHHHHHHS-CCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhhhHHHHHHHHhC-CCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000000 0000000 0000111234789999999999999999999986
No 223
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.7e-38 Score=338.03 Aligned_cols=262 Identities=21% Similarity=0.342 Sum_probs=201.7
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||.||+|+.. +|+.||+|++....... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccch-hhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 57889999999999999999875 78999999987543221 22367889999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||++ ++|.+++..... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++.....
T Consensus 82 e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp ECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred Eccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 9998 689888865432 3488999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCCccccccccccccccccccCC-CCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh----------hhhh--
Q 039344 761 SSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA----------LDEM-- 827 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~----------~~~~-- 827 (873)
........+++.|+|||.+.+.. ++.++||||+|+++|||++|+.||................ ...+
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 44445567899999999988765 7899999999999999999999997644321111100000 0000
Q ss_pred cCCCCCCCC-ch----hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 828 LDPRLPTPS-RN----VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 828 ~~~~~~~~~-~~----~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+..+... .. .......+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 001111000 00 0011235789999999999999999999986
No 224
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.4e-38 Score=333.63 Aligned_cols=245 Identities=23% Similarity=0.368 Sum_probs=202.8
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe------
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH------ 672 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 672 (873)
...+|++.+.||+|+||.||+|+.. +|+.||+|++.... +.+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 3467999999999999999999875 79999999987531 346789999999999999999999865
Q ss_pred ----------cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC
Q 039344 673 ----------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF 742 (873)
Q Consensus 673 ----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~ 742 (873)
....++||||+++++|.+++.... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 455899999999999999996543 34589999999999999999999999 9999999999999999
Q ss_pred CCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhh
Q 039344 743 ENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNI 822 (873)
Q Consensus 743 ~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~ 822 (873)
++.+||+|||+++...... ......|++.|+|||.+.+..++.++||||+|+++|||++|..|+.... .
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------~ 226 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----------K 226 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----------H
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----------H
Confidence 9999999999998775443 2334578999999999999999999999999999999999999964211 1
Q ss_pred hhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 823 ALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.......+..+... ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 227 ~~~~~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 227 FFTDLRDGIISDIF------DKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHHHHHTTCCCTTS------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcccccccC------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11122222222111 123789999999999999999999999874
No 225
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=348.49 Aligned_cols=247 Identities=15% Similarity=0.129 Sum_probs=200.3
Q ss_pred HhcCCCCCceeeecCCeEEEEEE------eCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc---CCceeeEEeEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSK------LASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW---HRNIVKVYGFC 670 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~ 670 (873)
..++|.+.+.||+|+||+||+|. ..+++.||+|++... ...++..|+++++.++ |+||+++++++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 34679999999999999999993 457899999998743 1457788888888886 99999999999
Q ss_pred EecceeEEEEEeccCCChhhHhcccc--cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC------
Q 039344 671 LHVRHLFIVYEYFKMCSLAVILSNDA--AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF------ 742 (873)
Q Consensus 671 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~------ 742 (873)
...+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 99999999999999999999997532 235699999999999999999999999 9999999999999998
Q ss_pred -----CCCeEEeccccccccCC--CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchh
Q 039344 743 -----ENEAHVSDFGIAKFLKP--DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSF 815 (873)
Q Consensus 743 -----~~~~kl~Dfg~a~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~ 815 (873)
++.+||+|||+|+.+.. .........||+.|+|||++.+..++.++|||||||++|||+||+.||.......+
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 293 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC 293 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce
Confidence 89999999999976542 22344567899999999999999999999999999999999999999864322111
Q ss_pred hhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCC-CCHHHHHHHh
Q 039344 816 SSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESR-PTMQKVCQLL 871 (873)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~ev~~~L 871 (873)
. ....+.... . ...+.+++..|++.+|.+| |+++++.+.|
T Consensus 294 ~-----------~~~~~~~~~--~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 294 K-----------PEGLFRRLP--H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp E-----------ECSCCTTCS--S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred e-----------echhccccC--c---HHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 0 111111111 1 2247788999999999998 6777777665
No 226
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.8e-38 Score=343.40 Aligned_cols=260 Identities=21% Similarity=0.328 Sum_probs=198.2
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe--------
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH-------- 672 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 672 (873)
.+|++.+.||+|+||+||+|+. .+|+.||+|++....... .....+.+|+.+++.++||||+++++++.+
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 6799999999999999999987 578999999987553322 224678899999999999999999999987
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccc
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFG 752 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 752 (873)
.+..++||||+++ ++.+.+.... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 3468999999985 6666664332 3589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCC----CCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhh
Q 039344 753 IAKFLKPD----SSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEM 827 (873)
Q Consensus 753 ~a~~~~~~----~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 827 (873)
+++.+... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||............... ....
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~ 248 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL-CGSI 248 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCC
Confidence 99876532 223345678999999998876 45799999999999999999999998754322111100000 0000
Q ss_pred cCC--------------C-CCCCCchhHHH------HHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 828 LDP--------------R-LPTPSRNVHDK------LISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 828 ~~~--------------~-~~~~~~~~~~~------~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
... . .........+. ...+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000 0 00000001111 234789999999999999999999986
No 227
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.6e-38 Score=338.68 Aligned_cols=252 Identities=23% Similarity=0.389 Sum_probs=197.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH---HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 467999999999999999999875 589999999875422 2357889999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||++++++.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999988643 24589999999999999999999999 999999999999999999999999999864322
Q ss_pred CCCCcccccccccccccccc-----ccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCC
Q 039344 760 DSSNWTELAGTYGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (873)
.........|++.|+|||.+ .+..++.++||||+|+++|+|++|+.||........... ......+....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~ 244 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-----IAKSDPPTLLT 244 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHSCCCCCSS
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH-----HhccCCcccCC
Confidence 21222345789999999988 366788999999999999999999999875432211110 11111111111
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+.. ....+.+++.+||+.||++|||++++++
T Consensus 245 ~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 PSK----WSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp GGG----SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccc----cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111 1234889999999999999999999975
No 228
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-38 Score=357.90 Aligned_cols=195 Identities=24% Similarity=0.382 Sum_probs=154.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec-----c
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV-----R 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 674 (873)
.++|++.+.||+|+||+||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc-CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 367999999999999999999754 789999999875432 333457799999999999999999999999543 5
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
..|+||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 6899999985 6888887543 4589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---------------------------CCcccccccccccccccc-ccCCCCCcchhHHHHHHHHHHHhC
Q 039344 755 KFLKPDS---------------------------SNWTELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKG 803 (873)
Q Consensus 755 ~~~~~~~---------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~sDv~s~G~il~el~tg 803 (873)
+...... ......+||+.|+|||++ .+..++.++||||+||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8765322 123456789999999976 456799999999999999999993
No 229
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.7e-38 Score=335.95 Aligned_cols=255 Identities=22% Similarity=0.331 Sum_probs=205.3
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCc------chhHHHHHHHHHHHHhcc-CCceeeEEeEEE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGE------MTFQQEFLNEVKALTEIW-HRNIVKVYGFCL 671 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 671 (873)
..++|++.+.||+|+||.||+|+.. +|+.||||++....... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3578999999999999999999875 68999999987543211 123456889999999995 999999999999
Q ss_pred ecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecc
Q 039344 672 HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDF 751 (873)
Q Consensus 672 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Df 751 (873)
+.+..++||||+++++|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999998643 4589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccccccccccc------cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhh
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 825 (873)
|+++..... .......|++.|+|||++. ...++.++||||+|+++|||++|+.||........ ..
T Consensus 169 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--------~~ 239 (298)
T 1phk_A 169 GFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM--------LR 239 (298)
T ss_dssp TTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------HH
T ss_pred cchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH--------HH
Confidence 999876543 2334567899999999875 45678899999999999999999999865332211 11
Q ss_pred hhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 826 EMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.+.......+..........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111111111111122345889999999999999999999975
No 230
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=346.28 Aligned_cols=258 Identities=16% Similarity=0.206 Sum_probs=200.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCC---------CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceee------
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLAS---------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVK------ 665 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------ 665 (873)
.++|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 3679999999999999999998763 789999998643 35789999999999999988
Q ss_pred ---------EEeEEEe-cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCC
Q 039344 666 ---------VYGFCLH-VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISS 735 (873)
Q Consensus 666 ---------l~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~ 735 (873)
+++++.. .+..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 6778876 67889999999 999999997542 35699999999999999999999999 999999999
Q ss_pred CCeeeCCCC--CeEEeccccccccCCCCC-------CccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 039344 736 KNVLLDFEN--EAHVSDFGIAKFLKPDSS-------NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806 (873)
Q Consensus 736 ~Nill~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P 806 (873)
+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 899999999987653322 12345799999999999999999999999999999999999999
Q ss_pred CcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 807 RDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
|..................... ..+.............+.+++.+||+.||++||+++++++.|+
T Consensus 268 f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 268 WTNCLPNTEDIMKQKQKFVDKP-GPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TGGGTTCHHHHHHHHHHHHHSC-CCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHhccCCh-hhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 8754311100000000001100 1110000000011234889999999999999999999999874
No 231
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.5e-38 Score=368.94 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=195.3
Q ss_pred ceeeecCCeEEEEEEe---CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEEEecc
Q 039344 608 HCIGKGGQGSVYMSKL---ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVYEYFK 684 (873)
Q Consensus 608 ~~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 684 (873)
+.||+|+||.||+|.+ .+++.||||+++.... .....+++.+|++++++++|||||++++++.+ +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 4799999999999964 3567899999975422 22346789999999999999999999999964 55889999999
Q ss_pred CCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCCCCC-
Q 039344 685 MCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSN- 763 (873)
Q Consensus 685 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~- 763 (873)
+|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+......
T Consensus 453 ~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999999543 4589999999999999999999999 9999999999999999999999999999877544322
Q ss_pred --ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 764 --WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 764 --~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......... ..+.... +...+..
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~-----~~i~~~~--~~~~p~~--- 596 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-----AMLEKGE--RMGCPAG--- 596 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTC--CCCCCTT---
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCC--CCCCCCC---
Confidence 223456788999999999999999999999999999998 99998754332111 1111111 1111211
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 841 DKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.+++.+||+.||++||++++|++.|+
T Consensus 597 -~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 597 -CPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp -CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1234889999999999999999999999885
No 232
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.4e-38 Score=332.88 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=198.3
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe----ccee
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH----VRHL 676 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 676 (873)
..|.+.+.||+|+||.||+|.. .++..||+|++...... ....+.+.+|+.+++.++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 4477788999999999999976 46889999998754322 2345779999999999999999999999876 3568
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCC--eeeCCCCCCCeeeC-CCCCeEEecccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP--IVHRDISSKNVLLD-FENEAHVSDFGI 753 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~-~~~~~kl~Dfg~ 753 (873)
++||||+++++|.+++... ..+++..+..++.|++.|++|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999643 4589999999999999999999999 7 99999999999998 789999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
++.... .......|++.|+|||.+. +.++.++||||+|+++|+|++|+.||........ ....+.....+
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~ 248 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-------IYRRVTSGVKP 248 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-------HHHHHTTTCCC
T ss_pred cccccc--cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-------HHHHHhccCCc
Confidence 975443 2334567999999999876 4589999999999999999999999875332211 11111111111
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
... .......+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASF--DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGG--GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccc--CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 110 0111124889999999999999999999986
No 233
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=340.79 Aligned_cols=260 Identities=25% Similarity=0.407 Sum_probs=204.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-----CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc-
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-----ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR- 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~- 674 (873)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 35688899999999999999983 46899999998753 2334578999999999999999999999987644
Q ss_pred -eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 675 -HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 675 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
..++||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 6899999999999999996543 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchh--------hhhhhhh
Q 039344 754 AKFLKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSF--------SSLNLNI 822 (873)
Q Consensus 754 a~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~--------~~~~~~~ 822 (873)
++........ .....++..|+|||.+.+..++.++||||+|+++|||+||..||........ .......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9877554332 1234567789999999988899999999999999999999999763211000 0000001
Q ss_pred hhhhhcC-CCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 823 ALDEMLD-PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 823 ~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
....+.. .+.+.+.. ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 272 ~~~~~~~~~~~~~~~~----~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHHTTCCCCCCTT----CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 12222221 1234889999999999999999999999875
No 234
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.1e-37 Score=343.35 Aligned_cols=258 Identities=21% Similarity=0.303 Sum_probs=192.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecc-----
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR----- 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 674 (873)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 367999999999999999999754 689999999975432 2334567889999999999999999999997654
Q ss_pred -eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 675 -HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 675 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
..++||||+++ ++.+.+. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999985 6777664 2488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh------------
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN------------ 821 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~------------ 821 (873)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..............
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9866432 233456789999999999999999999999999999999999999975432211000000
Q ss_pred --hhhhhhc--CCC--------------CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 --IALDEML--DPR--------------LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 --~~~~~~~--~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....... .+. .+............+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000000 000 01111112233456899999999999999999999986
No 235
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.8e-38 Score=351.80 Aligned_cols=200 Identities=23% Similarity=0.382 Sum_probs=168.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec-----c
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV-----R 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 674 (873)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc-ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 468999999999999999999764 688999999976433 333457899999999999999999999999766 5
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
..|+||||++ ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 6899999987 5898888543 4589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC----------------------Ccccccccccccccccc-ccCCCCCcchhHHHHHHHHHHHhCCCCCc
Q 039344 755 KFLKPDSS----------------------NWTELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRD 808 (873)
Q Consensus 755 ~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~sDv~s~G~il~el~tg~~P~~ 808 (873)
+....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87654321 23567899999999986 56669999999999999999998766654
No 236
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.2e-38 Score=337.22 Aligned_cols=254 Identities=24% Similarity=0.405 Sum_probs=195.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC--CCc--EEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA--SGE--IIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 676 (873)
.++|++.+.||+|+||+||+|+.. +++ .||+|+++..........+.+.+|+.+++.++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 367999999999999999999753 333 68999987654444455678999999999999999999999998755 8
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||+++++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999986542 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcC--C
Q 039344 757 LKPDSSN---WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLD--P 830 (873)
Q Consensus 757 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~--~ 830 (873)
....... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....+.. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~ 242 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--------ILHKIDKEGE 242 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTSCC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--------HHHHHHccCC
Confidence 7554332 223457788999999998889999999999999999999 999987543221 1111111 1
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..+.+.. ....+.+++.+||+.||++|||+.++++.|+
T Consensus 243 ~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 243 RLPRPED----CPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCcC----cCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1221111 1234889999999999999999999999874
No 237
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.7e-38 Score=345.43 Aligned_cols=258 Identities=21% Similarity=0.337 Sum_probs=202.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||+||+|+.. +|+.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 357899999999999999999865 78999999987642 233457799999999999999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++... ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999998653 35899999999999999999999832 899999999999999999999999999975532
Q ss_pred CCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhh--------------------
Q 039344 760 DSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLN-------------------- 819 (873)
Q Consensus 760 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~-------------------- 819 (873)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||............
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 223457899999999999999999999999999999999999999753321110000
Q ss_pred --------------hhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 820 --------------LNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 820 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.....+.......+.... ......+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS--GVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCT--TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCc--ccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000011111111111000 011234889999999999999999999986
No 238
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=346.56 Aligned_cols=255 Identities=21% Similarity=0.296 Sum_probs=201.0
Q ss_pred cCCCCCceeeecCCeEEEEEEe----CCCcEEEEEEccCCCC-CcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecce
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL----ASGEIIAVKKFHSPLP-GEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 675 (873)
++|++.+.||+|+||.||+|+. .+|+.||||+++.... ......+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 6799999999999999999987 4789999999864321 1112235577899999999 69999999999999999
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.++||||+++++|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999998643 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccccccccccccC--CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 756 FLKPDSS-NWTELAGTYGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 756 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~--~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........... ..........
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~----~~~~~~~~~~ 283 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE----ISRRILKSEP 283 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH----HHHHHHHCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHH----HHHHHhccCC
Confidence 6543222 23346799999999998853 478899999999999999999999875332211111 1111111122
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRP-----TMQKVCQL 870 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 870 (873)
+.+... ...+.+++.+||+.||++|| +++|+++.
T Consensus 284 ~~~~~~----~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 PYPQEM----SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCTTS----CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCccc----CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 222111 22478999999999999999 99999864
No 239
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.7e-38 Score=346.06 Aligned_cols=258 Identities=21% Similarity=0.258 Sum_probs=195.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce-----
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH----- 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 675 (873)
..+|++.+.||+|+||+||+|+...+..||+|++...... ..+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 3569999999999999999999877777999988653222 2369999999999999999999965443
Q ss_pred -eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC-CCCCeEEecccc
Q 039344 676 -LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD-FENEAHVSDFGI 753 (873)
Q Consensus 676 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~~~kl~Dfg~ 753 (873)
.++||||++++.+............+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 789999999765554443333445689999999999999999999999 999999999999999 789999999999
Q ss_pred ccccCCCCCCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh-----------
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN----------- 821 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~----------- 821 (873)
|+....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..............
T Consensus 189 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 189 AKILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CEECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 987654332 3346789999999998765 589999999999999999999999976443211110000
Q ss_pred hhhhhhcCCCCCCCCc-hh-----HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 IALDEMLDPRLPTPSR-NV-----HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 ~~~~~~~~~~~~~~~~-~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..........++.... .. ......+.+++.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0001111111111000 00 012235889999999999999999999975
No 240
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4e-38 Score=340.26 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=196.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCC-----cchhHHHHHHHHHHHHhccCCceeeEEeEEEecc
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPG-----EMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVR 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 674 (873)
.++|.+.+.||+|+||.||+|+.. +++.||||++...... .......+.+|+++++.++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999764 6889999998654211 1122345889999999999999999999987655
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC---eEEecc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSDF 751 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~Df 751 (873)
.++||||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++. +||+||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 89999999999999988643 4589999999999999999999999 9999999999999987665 999999
Q ss_pred ccccccCCCCCCccccccccccccccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhc
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEML 828 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 828 (873)
|+++..... .......||+.|+|||++. ...++.++||||+||++|+|++|+.||......... ...+.
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~ 233 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------KDQIT 233 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH-------HHHHH
T ss_pred ccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH-------HHHHH
Confidence 999876432 2234457899999999874 466889999999999999999999998753322110 01111
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.................+.+++.+||+.||++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11111111111112345889999999999999999999985
No 241
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.5e-38 Score=340.65 Aligned_cols=264 Identities=23% Similarity=0.385 Sum_probs=186.1
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
...++|++.+.||+|+||.||+|+. .+++.||||++..... ....+++.+|+.+++.++||||+++++++...+..+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 4457899999999999999999975 4689999999865422 223467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhHhcccc-----cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccc
Q 039344 678 IVYEYFKMCSLAVILSNDA-----AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFG 752 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 752 (873)
+||||+++++|.+++.... ....+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 9999999999999986421 234589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC-----Ccccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhh
Q 039344 753 IAKFLKPDSS-----NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDE 826 (873)
Q Consensus 753 ~a~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 826 (873)
+++....... ......||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||...................
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc
Confidence 9986643321 1234578999999999876 568999999999999999999999987544322111111000000
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 827 MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
... ..... .........+.+++.+||+.||++||+++|+++
T Consensus 247 ~~~-~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 247 LET-GVQDK-EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTC-------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccc-ccccc-hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000 00000 000011234789999999999999999999986
No 242
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5e-38 Score=345.54 Aligned_cols=271 Identities=21% Similarity=0.296 Sum_probs=200.2
Q ss_pred cCHHHHHHHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCc--------chhHHHHHHHHHHHHhccCCce
Q 039344 592 IIYEEIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGE--------MTFQQEFLNEVKALTEIWHRNI 663 (873)
Q Consensus 592 ~~~~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~ni 663 (873)
...+++.....+|++.+.||+|+||.||+|...+|+.||||++....... ....+.+.+|+.+++.++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34567778889999999999999999999998889999999986543321 1224779999999999999999
Q ss_pred eeEEeEEEe-----cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCe
Q 039344 664 VKVYGFCLH-----VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNV 738 (873)
Q Consensus 664 v~l~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 738 (873)
+++++++.. ....++||||++ |++.+++... ...+++..+..++.|++.|++|||++ +|+||||||+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999999954 236899999998 5777777543 24589999999999999999999999 999999999999
Q ss_pred eeCCCCCeEEeccccccccCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhh
Q 039344 739 LLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSS 817 (873)
Q Consensus 739 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~ 817 (873)
+++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp EECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EEcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999999754433 23344678999999999877 678999999999999999999999997543221111
Q ss_pred hhhh---------------hhhhhhcCCCCC-CCCch----hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 818 LNLN---------------IALDEMLDPRLP-TPSRN----VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 818 ~~~~---------------~~~~~~~~~~~~-~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.... ....+....... .+... .......+.+++.+||+.||++|||++|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0000 000011111110 00000 0111235889999999999999999999986
No 243
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.6e-38 Score=344.01 Aligned_cols=255 Identities=20% Similarity=0.348 Sum_probs=204.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcc--------------hhHHHHHHHHHHHHhccCCceeeE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEM--------------TFQQEFLNEVKALTEIWHRNIVKV 666 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l 666 (873)
.++|++.+.||+|+||.||+|+. +|+.||+|++........ ...+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999998 899999999864322111 112789999999999999999999
Q ss_pred EeEEEecceeEEEEEeccCCChhhH------hcccccccCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeeCCCCCCCee
Q 039344 667 YGFCLHVRHLFIVYEYFKMCSLAVI------LSNDAAAKNLGWTRRMNMIKGIVDALSYMHN-DCFPPIVHRDISSKNVL 739 (873)
Q Consensus 667 ~~~~~~~~~~~lv~e~~~~~~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlk~~Nil 739 (873)
++++.+.+..++||||+++++|.++ +... ....+++..++.++.|++.|++|||+ . +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 4432 13568999999999999999999999 8 9999999999999
Q ss_pred eCCCCCeEEeccccccccCCCCCCccccccccccccccccccC-CCCC-cchhHHHHHHHHHHHhCCCCCcccccchhhh
Q 039344 740 LDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTE-KCDVYSFGVLALEVIKGKHPRDFISSMSFSS 817 (873)
Q Consensus 740 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~sDv~s~G~il~el~tg~~P~~~~~~~~~~~ 817 (873)
++.++.+||+|||.++..... ......|++.|+|||.+.+. .++. ++||||+|+++|||++|+.||......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 999999999999999876443 34456789999999999877 5665 999999999999999999998754331
Q ss_pred hhhhhhhhhhcCCCCCCCCc---------------hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 818 LNLNIALDEMLDPRLPTPSR---------------NVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
......+.......+.. ........+.+++.+||+.||++|||++|+++
T Consensus 259 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 ---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 01111111111111100 00112235889999999999999999999986
No 244
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=339.35 Aligned_cols=251 Identities=21% Similarity=0.294 Sum_probs=185.2
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEE-------
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCL------- 671 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~------- 671 (873)
..+|++.+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 357999999999999999999864 7899999998543 2334577899999999995 999999999994
Q ss_pred -ecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCC--eeeCCCCCCCeeeCCCCCeEE
Q 039344 672 -HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPP--IVHRDISSKNVLLDFENEAHV 748 (873)
Q Consensus 672 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~~kl 748 (873)
.....++||||+. |+|.+++........+++..++.++.|++.|++|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3445899999997 78888886644455699999999999999999999999 8 999999999999999999999
Q ss_pred eccccccccCCCCCCc------------ccccccccccccccc---ccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc
Q 039344 749 SDFGIAKFLKPDSSNW------------TELAGTYGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM 813 (873)
Q Consensus 749 ~Dfg~a~~~~~~~~~~------------~~~~g~~~y~aPE~~---~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~ 813 (873)
+|||+++......... ....||+.|+|||++ .+..++.++||||+||++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 9999998765432211 134589999999998 5667889999999999999999999998643322
Q ss_pred hhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 814 SFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.. ....... +..... ...+.+++.+||+.||++|||++|+++.|+
T Consensus 260 ~~--------~~~~~~~--~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 RI--------VNGKYSI--PPHDTQ----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp --------------CCC--CTTCCS----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred Hh--------hcCcccC--Cccccc----chHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 1111111 111111 113778999999999999999999999874
No 245
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.8e-38 Score=331.70 Aligned_cols=254 Identities=23% Similarity=0.329 Sum_probs=203.8
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
...++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch-HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 34568999999999999999999875 78999999986543222 23577999999999999999999999999999999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC---CCeEEeccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE---NEAHVSDFGIA 754 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~kl~Dfg~a 754 (873)
+||||+++++|.+++... ..+++..+..++.|++.|++|||++ +++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999998888543 3589999999999999999999999 99999999999999764 46999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCC
Q 039344 755 KFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834 (873)
Q Consensus 755 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (873)
+...... ......|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||........ ...+..+....
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI--------LKRVETGKYAF 241 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------HHHHHHCCCCC
T ss_pred eeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHcCCCCC
Confidence 8765432 2334568999999998865 489999999999999999999999875432211 11111122221
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...........+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11111122335889999999999999999999986
No 246
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.6e-38 Score=333.37 Aligned_cols=255 Identities=23% Similarity=0.344 Sum_probs=185.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||+||+|+. .+|+.||+|+++..... ....+.+.++...++.++||||+++++++.+.+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46799999999999999999986 57899999999754322 22233445555567888999999999999999999999
Q ss_pred EEeccCCChhhHhccc-ccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 680 YEYFKMCSLAVILSND-AAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
|||++ |++.+++... .....+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99998 4877776542 23356899999999999999999999853 89999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccccc----ccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCC
Q 039344 759 PDSSNWTELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPT 834 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (873)
... ......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||+...... ..............
T Consensus 162 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~ 234 (290)
T 3fme_A 162 DDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF------QQLKQVVEEPSPQL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH------HHHHHHHHSCCCCC
T ss_pred ccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH------HHHHHHhccCCCCc
Confidence 432 22335789999999996 55678899999999999999999999987432210 00001111111111
Q ss_pred CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 835 PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 835 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+... ....+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~---~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 PADK---FSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CTTT---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccc---CCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111 1234889999999999999999999976
No 247
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=332.34 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=197.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCC-cchhHHHHHHHHHHHHhccCCceeeEEeEEE--eccee
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPG-EMTFQQEFLNEVKALTEIWHRNIVKVYGFCL--HVRHL 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 676 (873)
.++|.+.+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999864 6889999998643211 1123577999999999999999999999984 45678
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||||++++ +.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999977 666665432 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CCccccccccccccccccccCC--CCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 757 LKPDS--SNWTELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 757 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
..... .......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||........ ...+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~i~~~~~ 230 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL--------FENIGKGSY 230 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------HHHHHHCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH--------HHHHhcCCC
Confidence 65322 2233567899999999987644 37799999999999999999999875332211 111112222
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+... ...+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 231 AIPGDC----GPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CCCSSS----CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCcc----CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 222221 224789999999999999999999986
No 248
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.4e-37 Score=348.95 Aligned_cols=257 Identities=18% Similarity=0.268 Sum_probs=201.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccC-CceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH-RNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~l 678 (873)
.++|++.++||+|+||.||+|+. .+++.||||++...... +++..|+++++.++| ++++.+..++.+.+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 46899999999999999999985 57999999987654322 347889999999976 666677777778888999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee---CCCCCeEEecccccc
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL---DFENEAHVSDFGIAK 755 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~ 755 (873)
||||+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 89999998643 24599999999999999999999999 99999999999999 688999999999998
Q ss_pred ccCCCCCC-------ccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhc
Q 039344 756 FLKPDSSN-------WTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEML 828 (873)
Q Consensus 756 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 828 (873)
.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...................+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~- 233 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV- 233 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH-
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc-
Confidence 77654322 1256799999999999999999999999999999999999999986443211111111000000
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 829 DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
..... .........+.+++.+||+.||++||++++|++.|+
T Consensus 234 ~~~~~---~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 234 ATSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HSCHH---HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccHH---HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 00000 000011235889999999999999999999999874
No 249
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.8e-38 Score=344.51 Aligned_cols=257 Identities=20% Similarity=0.317 Sum_probs=182.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec------
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV------ 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 673 (873)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 46899999999999999999975 5789999999976432 223457788999999999999999999999754
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
...|+|+|++ +++|.+++.. ..+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999998 6888888754 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh-------hh--
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN-------IA-- 823 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~-------~~-- 823 (873)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.............. ..
T Consensus 179 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 179 ARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865432 344678999999999877 6789999999999999999999999975443211111000 00
Q ss_pred ------hhhhcC--CCCCCCC--chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 824 ------LDEMLD--PRLPTPS--RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 824 ------~~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+.. +..+... .........+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000000 0000000 000011234789999999999999999999975
No 250
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.6e-37 Score=341.31 Aligned_cols=258 Identities=22% Similarity=0.315 Sum_probs=199.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec-----c
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV-----R 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 674 (873)
..+|++.+.||+|+||.||+|+.. +++.||+|++... ......+.+.+|++++++++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 467999999999999999999764 7889999999753 2233457789999999999999999999999764 3
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
..++||||++ ++|.+++.. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6899999998 588888754 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---Ccccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh---------
Q 039344 755 KFLKPDSS---NWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN--------- 821 (873)
Q Consensus 755 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~--------- 821 (873)
+....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 87654322 2244689999999998654 4589999999999999999999999975443221111100
Q ss_pred ----------hhhhhhcCCCCCCCC-chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 ----------IALDEMLDPRLPTPS-RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 ----------~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.......... ..+. .........+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKN-KVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCC-CCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhhhhhHHHHHHhcCCcc-CCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 0000 000111235889999999999999999999986
No 251
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=338.51 Aligned_cols=255 Identities=23% Similarity=0.355 Sum_probs=198.4
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
...++|++.+.||+|+||.||+|+... .||+|++....... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 345789999999999999999998863 48999987543222 223557789999999999999999999999999999
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
||||+++++|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++ ++.+||+|||+++...
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp ECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred EeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 999999999999996543 4589999999999999999999999 999999999999998 7899999999987653
Q ss_pred CC-----CCCcccccccccccccccccc---------CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhh
Q 039344 759 PD-----SSNWTELAGTYGYVAPELAYT---------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIAL 824 (873)
Q Consensus 759 ~~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~ 824 (873)
.. ........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||........... .
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-----~ 255 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ-----M 255 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH-----H
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----h
Confidence 21 122334568999999999864 4578899999999999999999999875432211111 1
Q ss_pred hhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 825 DEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.....+...... ....+.+++.+||+.||++|||++++++.|+
T Consensus 256 ~~~~~~~~~~~~-----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 256 GTGMKPNLSQIG-----MGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HTTCCCCCCCSS-----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred ccCCCCCCCcCC-----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 111111111110 1123789999999999999999999999985
No 252
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.5e-37 Score=331.13 Aligned_cols=250 Identities=26% Similarity=0.407 Sum_probs=191.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe-------
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH------- 672 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 672 (873)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.. .....+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 467899999999999999999864 799999999853 22345778999999999999999999999865
Q ss_pred ------cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCe
Q 039344 673 ------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEA 746 (873)
Q Consensus 673 ------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~ 746 (873)
.+..++||||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 457899999999999999997533 3477889999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCC--------------CCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccc
Q 039344 747 HVSDFGIAKFLKPDS--------------SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFIS 811 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~ 811 (873)
||+|||+++...... .......|++.|+|||.+.+. .++.++||||+||++|||++ ||....
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 999999998764321 122345689999999998764 68999999999999999998 443111
Q ss_pred cchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 812 SMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
. .......+.......+..........+.+++.+||+.||++|||++++++
T Consensus 233 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 E-------RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp H-------HHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred h-------HHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 0 01111111111111111111122234789999999999999999999986
No 253
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.8e-37 Score=334.00 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=197.3
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEEe--cceeE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCLH--VRHLF 677 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~ 677 (873)
++|++.+.||+|+||+||+|+. .+++.||+|++... ..+.+.+|+.+++.++ ||||+++++++.+ ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 6789999999999999999975 57899999998632 1467899999999996 9999999999987 66789
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC-CeEEeccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN-EAHVSDFGIAKF 756 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~-~~kl~Dfg~a~~ 756 (873)
+||||++++++.+++. .+++..+..++.|++.|++|||++ +|+||||||+||+++.++ .+||+|||+++.
T Consensus 110 lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 9999999999998873 378899999999999999999999 999999999999999777 899999999987
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccc-hh-h---hhhhhhh-------
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSM-SF-S---SLNLNIA------- 823 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~-~~-~---~~~~~~~------- 823 (873)
..... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... .. . .......
T Consensus 181 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 181 YHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp CCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 65433 3345678999999999877 66899999999999999999999998532211 00 0 0000000
Q ss_pred --------hhhhcCCCCCCC------CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 824 --------LDEMLDPRLPTP------SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 824 --------~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
............ ..........+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000 0000112345889999999999999999999986
No 254
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.5e-37 Score=344.82 Aligned_cols=258 Identities=18% Similarity=0.300 Sum_probs=198.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc--------CCceeeEEeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW--------HRNIVKVYGFCL 671 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~ 671 (873)
.++|++.+.||+|+||+||+|+. .+++.||||++... ....+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 36799999999999999999975 46889999998642 234577899999999996 888999999998
Q ss_pred ----ecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCC---
Q 039344 672 ----HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFEN--- 744 (873)
Q Consensus 672 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~--- 744 (873)
+....++||||+. +++.+++.... ...+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLG-HHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEeccC-ccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 4567899999995 55555554322 245899999999999999999999964 899999999999999876
Q ss_pred ----------------------------------------------CeEEeccccccccCCCCCCccccccccccccccc
Q 039344 745 ----------------------------------------------EAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPEL 778 (873)
Q Consensus 745 ----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~ 778 (873)
.+||+|||+++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876533 334578999999999
Q ss_pred cccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhh-hhhhhhh------------------cCCC-----CCC
Q 039344 779 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNL-NIALDEM------------------LDPR-----LPT 834 (873)
Q Consensus 779 ~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~-~~~~~~~------------------~~~~-----~~~ 834 (873)
+.+..++.++||||+||++|||++|+.||.......+..... .....+. .... ...
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997543221110000 0000000 0000 000
Q ss_pred ------------CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 835 ------------PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 835 ------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...........+.+++.+||+.||++|||++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00112344567899999999999999999999986
No 255
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.1e-37 Score=347.04 Aligned_cols=199 Identities=19% Similarity=0.298 Sum_probs=173.0
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc------cCCceeeEEeEEEec
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI------WHRNIVKVYGFCLHV 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~ 673 (873)
..+|++.+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|+.+++.+ +|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 457999999999999999999764 6899999998742 23356788899988887 467999999999999
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC--eEEecc
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE--AHVSDF 751 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~--~kl~Df 751 (873)
+..++||||+. +++.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999997 688888865432 3489999999999999999999999 9999999999999999987 999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccc
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 811 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~ 811 (873)
|+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 247 G~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 247 GSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 999765432 334678999999999999999999999999999999999999997544
No 256
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.4e-37 Score=338.81 Aligned_cols=255 Identities=24% Similarity=0.363 Sum_probs=197.8
Q ss_pred HhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHH-HHhccCCceeeEEeEEEecceeE
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKA-LTEIWHRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~ 677 (873)
..++|++.+.||+|+||.||+|+. .+|+.||||+++..... ....++..|+.. ++.++||||+++++++.+.+..+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS--QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC--HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc--HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 346788899999999999999986 57999999999765332 224555566665 77789999999999999999999
Q ss_pred EEEEeccCCChhhHhcccc-cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 678 IVYEYFKMCSLAVILSNDA-AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
+||||+++ +|.+++.... ....+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++.
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999985 8888876422 3456899999999999999999999742 899999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccccc----cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELAY----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
.... .......||+.|+|||++. ...++.++|||||||++|||++|+.||+...... ..... .......
T Consensus 204 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~---~~~~~---~~~~~~~ 276 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQ---VVEEPSP 276 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---HHHHH---HHHSCCC
T ss_pred cccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH---HHHHH---HhcCCCC
Confidence 6432 1223357999999999964 3468899999999999999999999987432210 00011 1111111
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 833 PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+... ....+.+++.+||+.||++||++.|+++
T Consensus 277 ~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 277 QLPADK---FSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCGGG---SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCccc---CCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111 2234889999999999999999999976
No 257
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-37 Score=343.07 Aligned_cols=259 Identities=22% Similarity=0.261 Sum_probs=194.2
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec----
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV---- 673 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 673 (873)
....+|++.+.||+|+||+||+|+. .+|+.||+|++...... ..+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 4567899999999999999999975 57999999998654222 23799999999999999999998543
Q ss_pred ----------------------------------ceeEEEEEeccCCChhhHhccc-ccccCCChHHHHHHHHHHHHHHH
Q 039344 674 ----------------------------------RHLFIVYEYFKMCSLAVILSND-AAAKNLGWTRRMNMIKGIVDALS 718 (873)
Q Consensus 674 ----------------------------------~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~ 718 (873)
...++||||++ ++|.+.+... .....+++..+..++.|++.||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34889999999 5777666532 23456899999999999999999
Q ss_pred HHHhCCCCCeeeCCCCCCCeeeC-CCCCeEEeccccccccCCCCCCccccccccccccccccccC-CCCCcchhHHHHHH
Q 039344 719 YMHNDCFPPIVHRDISSKNVLLD-FENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVL 796 (873)
Q Consensus 719 ~LH~~~~~~i~H~Dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~i 796 (873)
|||+. +|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||.+.+. .++.++||||+||+
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 99999 999999999999998 68899999999998765443 23345789999999998775 48999999999999
Q ss_pred HHHHHhCCCCCcccccchhhhhhhh-------hhhhhh----cCCCCCCCC-chh-----HHHHHHHHHHHhhcccCCCC
Q 039344 797 ALEVIKGKHPRDFISSMSFSSLNLN-------IALDEM----LDPRLPTPS-RNV-----HDKLISIVEVTISCVDENPE 859 (873)
Q Consensus 797 l~el~tg~~P~~~~~~~~~~~~~~~-------~~~~~~----~~~~~~~~~-~~~-----~~~~~~l~~li~~cl~~dP~ 859 (873)
+|||++|+.||.............. .....+ ....++... ... ......+.+++.+||+.||+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9999999999986443211111100 000000 000111000 000 01123488999999999999
Q ss_pred CCCCHHHHHH
Q 039344 860 SRPTMQKVCQ 869 (873)
Q Consensus 860 ~RPs~~ev~~ 869 (873)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999975
No 258
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.4e-37 Score=340.60 Aligned_cols=256 Identities=20% Similarity=0.318 Sum_probs=195.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEeccee---
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHL--- 676 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~--- 676 (873)
.++|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 467899999999999999999754 689999999976533 233457789999999999999999999999876654
Q ss_pred ---EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 677 ---FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 677 ---~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
++||||+. +++.+++. ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 67877763 2389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh-----------
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN----------- 821 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~----------- 821 (873)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 9865432 334678999999999887 6789999999999999999999999975432211111000
Q ss_pred --------hhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 --------IALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
........................+.+++.+||+.||++|||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000010000000000000112345889999999999999999999976
No 259
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.1e-37 Score=335.46 Aligned_cols=264 Identities=21% Similarity=0.346 Sum_probs=199.6
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEe--CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc---cCCceeeEEeEEE--
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKL--ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI---WHRNIVKVYGFCL-- 671 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-- 671 (873)
++.++|++.+.||+|+||.||+|+. .+|+.||+|+++....... ....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc-CCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 3457899999999999999999987 4688999999864322211 123456777777766 8999999999997
Q ss_pred ---ecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEE
Q 039344 672 ---HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHV 748 (873)
Q Consensus 672 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl 748 (873)
.....++||||++ |+|.+++..... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 5667899999998 699998865432 3489999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh----h
Q 039344 749 SDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA----L 824 (873)
Q Consensus 749 ~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~----~ 824 (873)
+|||+++..... .......|++.|+|||++.+..++.++||||+|+++|||++|+.||................ .
T Consensus 162 ~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 162 ADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred ecCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 999999865432 23344678999999999999999999999999999999999999997544321111110000 0
Q ss_pred hh----------hcCCCCCCC-CchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 825 DE----------MLDPRLPTP-SRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 825 ~~----------~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. ........+ ..........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000000000 0000112234789999999999999999999985
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.4e-37 Score=343.64 Aligned_cols=256 Identities=25% Similarity=0.312 Sum_probs=191.9
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec------c
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV------R 674 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 674 (873)
.+|++.+.||+|+||.||+|+.. +|+.||||++..... .+.+|+++++.++||||+++++++... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 46888999999999999999875 699999999865322 223799999999999999999998642 2
Q ss_pred eeEEEEEeccCCChhhHhcc-cccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC-CCeEEeccc
Q 039344 675 HLFIVYEYFKMCSLAVILSN-DAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE-NEAHVSDFG 752 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~-~~~kl~Dfg 752 (873)
..++||||+++ ++.+.+.. ......+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 36799999986 55554432 22345689999999999999999999999 99999999999999966 568999999
Q ss_pred cccccCCCCCCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh-------hhh
Q 039344 753 IAKFLKPDSSNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN-------IAL 824 (873)
Q Consensus 753 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~-------~~~ 824 (873)
+++....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.............. ..+
T Consensus 203 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 203 SAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9987654332 3346789999999998765 689999999999999999999999976443211111000 001
Q ss_pred hhh----cCCCCCCCC--chh----HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 825 DEM----LDPRLPTPS--RNV----HDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 825 ~~~----~~~~~~~~~--~~~----~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
..+ .+..++... .+. ......+.+++.+||+.||++||++.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 111 011111100 000 011235889999999999999999999975
No 261
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.5e-37 Score=333.62 Aligned_cols=256 Identities=20% Similarity=0.302 Sum_probs=200.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEe--CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCc------eeeEEeEEEe
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL--ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN------IVKVYGFCLH 672 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~ 672 (873)
.++|++.+.||+|+||+||+|.. .+|+.||||+++.. ....+.+.+|+.+++.++|++ ++++++++.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 36799999999999999999976 36889999998642 234577889999999997765 9999999999
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC----------
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF---------- 742 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---------- 742 (873)
.+..++||||+ ++++.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 7899998865432 3588999999999999999999999 9999999999999987
Q ss_pred ---------CCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc
Q 039344 743 ---------ENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM 813 (873)
Q Consensus 743 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~ 813 (873)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999865432 23467899999999999999999999999999999999999999754322
Q ss_pred hhhhhhhhh-------h--------------------------hhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCC
Q 039344 814 SFSSLNLNI-------A--------------------------LDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPES 860 (873)
Q Consensus 814 ~~~~~~~~~-------~--------------------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 860 (873)
......... . ......+ ..............+.+++.+||+.||++
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP-LKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCC-GGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcc-hhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 110000000 0 0000000 00000001123456889999999999999
Q ss_pred CCCHHHHHH
Q 039344 861 RPTMQKVCQ 869 (873)
Q Consensus 861 RPs~~ev~~ 869 (873)
|||++|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999975
No 262
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=348.57 Aligned_cols=198 Identities=21% Similarity=0.368 Sum_probs=153.8
Q ss_pred CCCC-CceeeecCCeEEEEEEeC---CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe--ccee
Q 039344 603 DFDD-EHCIGKGGQGSVYMSKLA---SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH--VRHL 676 (873)
Q Consensus 603 ~~~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 676 (873)
.|++ .++||+|+||+||+|+.. +++.||+|++..... .+.+.+|+.+++.++||||+++++++.. ....
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 3555 568999999999999865 578999999975321 2568899999999999999999999964 6789
Q ss_pred EEEEEeccCCChhhHhcccc------cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee----CCCCCe
Q 039344 677 FIVYEYFKMCSLAVILSNDA------AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL----DFENEA 746 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill----~~~~~~ 746 (873)
++||||+++ ++.+++.... ....+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 999999984 7777664322 122489999999999999999999999 99999999999999 677899
Q ss_pred EEeccccccccCCCC---CCccccccccccccccccccC-CCCCcchhHHHHHHHHHHHhCCCCCcc
Q 039344 747 HVSDFGIAKFLKPDS---SNWTELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 809 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~sDv~s~G~il~el~tg~~P~~~ 809 (873)
||+|||+|+...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999998765432 223456789999999998874 589999999999999999999999964
No 263
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.9e-37 Score=339.27 Aligned_cols=266 Identities=20% Similarity=0.219 Sum_probs=189.0
Q ss_pred HHHHHHhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec
Q 039344 595 EEIIRATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV 673 (873)
Q Consensus 595 ~e~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 673 (873)
.+.....++|++.+.||+|+||.||+|+.. +|+.||||++...... ...+.+|+..++.++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 445667789999999999999999999874 6899999998653222 24566788888999999999999999764
Q ss_pred ce-------eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHH--hCCCCCeeeCCCCCCCeeeCC-C
Q 039344 674 RH-------LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH--NDCFPPIVHRDISSKNVLLDF-E 743 (873)
Q Consensus 674 ~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--~~~~~~i~H~Dlk~~Nill~~-~ 743 (873)
+. .++||||++++..............+++..+..++.|++.|++||| +. +|+||||||+||+++. +
T Consensus 92 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred ccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 43 7899999996543333322233456889999999999999999999 88 9999999999999997 8
Q ss_pred CCeEEeccccccccCCCCCCccccccccccccccccccCC-CCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh-
Q 039344 744 NEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN- 821 (873)
Q Consensus 744 ~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~- 821 (873)
+.+||+|||+++...... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||..............
T Consensus 169 ~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 247 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247 (360)
T ss_dssp TEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred CcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence 999999999998765433 233457899999999987654 89999999999999999999999976443211111100
Q ss_pred ------hhhhhhcCCCCC-------CCCch-------hHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 ------IALDEMLDPRLP-------TPSRN-------VHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 ------~~~~~~~~~~~~-------~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.....+ ++... ....+ .......+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 248 LGCPSREVLRKL-NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HCCCCHHHHHHH-CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCCCHHHHHhc-ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000 00000 00000 0012345889999999999999999999975
No 264
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.2e-37 Score=333.00 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=171.4
Q ss_pred hcCCCCC-ceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHH-HHHHhccCCceeeEEeEEEe----c
Q 039344 601 TNDFDDE-HCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEV-KALTEIWHRNIVKVYGFCLH----V 673 (873)
Q Consensus 601 ~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~----~ 673 (873)
.++|.+. +.||+|+||+||+|+.. +|+.||||++... ....+|+ ..++.++||||+++++++.. .
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 4678885 46999999999999876 7999999998642 1222333 33566689999999999986 4
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC---CCeEEec
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE---NEAHVSD 750 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~kl~D 750 (873)
...++||||+++|+|.+++.... ...+++.+++.++.|++.|++|||++ +|+||||||+||+++.+ +.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 56899999999999999997543 24589999999999999999999999 99999999999999864 4599999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCC
Q 039344 751 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830 (873)
Q Consensus 751 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 830 (873)
||+++..... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||............. ..+...
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~ 248 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK----RRIRLG 248 (336)
T ss_dssp CTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH----Hhhhcc
Confidence 9999866532 2334678999999999988889999999999999999999999987543221111100 011111
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+..........+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111112234889999999999999999999986
No 265
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.3e-37 Score=330.13 Aligned_cols=251 Identities=23% Similarity=0.379 Sum_probs=196.1
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc--CCceeeEEeEEEeccee
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW--HRNIVKVYGFCLHVRHL 676 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~ 676 (873)
...++|++.+.||+|+||.||+|+..+++.||||++...... ....+.+.+|+.++++++ ||||+++++++.+.+..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 345779999999999999999999888999999998754322 334577899999999996 59999999999999999
Q ss_pred EEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 677 FIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 677 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
++||| +.+++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++ ++.+||+|||+++.
T Consensus 104 ~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccc
Confidence 99999 6678999998653 3589999999999999999999999 999999999999996 48999999999987
Q ss_pred cCCCCCC--cccccccccccccccccc-----------CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhh
Q 039344 757 LKPDSSN--WTELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIA 823 (873)
Q Consensus 757 ~~~~~~~--~~~~~g~~~y~aPE~~~~-----------~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~ 823 (873)
....... .....|++.|+|||.+.+ ..++.++||||+|+++|||++|+.||....... ..
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-------~~ 248 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-------SK 248 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-------HH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-------HH
Confidence 6543321 234578999999999875 467889999999999999999999986432210 11
Q ss_pred hhhhcCCCC--CCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 824 LDEMLDPRL--PTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 824 ~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.....++.. ..+... ...+.+++.+||+.||++||+++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 249 LHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhcccccCCcccc----hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 112222211 111111 124789999999999999999999986
No 266
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.9e-37 Score=337.29 Aligned_cols=259 Identities=22% Similarity=0.340 Sum_probs=197.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEec-----c
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHV-----R 674 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 674 (873)
.++|++.+.||+|+||.||+|+.. +|+.||||++... ........+.+|+.+++.++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 467999999999999999999865 6899999999643 2333456788999999999999999999998764 6
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIA 754 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 754 (873)
..++||||++ ++|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999998 588888754 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC----------cccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh--
Q 039344 755 KFLKPDSSN----------WTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN-- 821 (873)
Q Consensus 755 ~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~-- 821 (873)
+........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 876533211 223578999999998764 6789999999999999999999999975432111000000
Q ss_pred --------------hhhhhhcC--CCCCCCC--chhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 --------------IALDEMLD--PRLPTPS--RNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 --------------~~~~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+... +..+... .........+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 0000000 000112335789999999999999999999986
No 267
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.7e-37 Score=335.10 Aligned_cols=256 Identities=19% Similarity=0.315 Sum_probs=194.8
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce----
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH---- 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 675 (873)
..+|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 367889999999999999999864 799999999976432 23345778999999999999999999999987653
Q ss_pred --eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 676 --LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 676 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
.++||||++ +++.+++. ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 57877763 2489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhh-----------
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLN----------- 821 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~----------- 821 (873)
++..... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||..............
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865432 334578999999999877 6789999999999999999999999975442211100000
Q ss_pred --------hhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 822 --------IALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 822 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.....+..................+.+++.+||+.||++|||++++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000000000000112335889999999999999999999975
No 268
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.3e-37 Score=361.08 Aligned_cols=254 Identities=22% Similarity=0.373 Sum_probs=200.7
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC----CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA----SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH 675 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 675 (873)
..++|++.+.||+|+||.||+|+.. .+..||+|+++... .....+.+.+|+.+++.++||||+++++++. .+.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 3467888899999999999999764 25679999987532 2334578999999999999999999999985 456
Q ss_pred eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 676 LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 676 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999996432 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 756 FLKPDSS-NWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 756 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||........... +... .+.+
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~-----i~~~--~~~~ 612 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-----IENG--ERLP 612 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-----HHHT--CCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-----HHcC--CCCC
Confidence 7654322 2223456789999999998999999999999999999997 9999875433221111 1111 1111
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.+.. ....+.+++.+||+.||++|||+.++++.|+
T Consensus 613 ~~~~----~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 613 MPPN----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcc----ccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1211 1234889999999999999999999999874
No 269
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=332.84 Aligned_cols=257 Identities=23% Similarity=0.336 Sum_probs=191.3
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEE--------
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCL-------- 671 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-------- 671 (873)
..+|++.+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 467899999999999999999876 5899999998643 2334578899999999999999999999884
Q ss_pred ------ecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC-CCC
Q 039344 672 ------HVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD-FEN 744 (873)
Q Consensus 672 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~ 744 (873)
+....++||||++ |+|.+++.. ..+++..+..++.|++.|++|||++ +|+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 689998854 3488999999999999999999999 999999999999997 567
Q ss_pred CeEEeccccccccCCCC---CCcccccccccccccccccc-CCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhh
Q 039344 745 EAHVSDFGIAKFLKPDS---SNWTELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNL 820 (873)
Q Consensus 745 ~~kl~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~ 820 (873)
.+||+|||+++...... .......+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||.............
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998765322 12334567899999998765 678999999999999999999999997544321111000
Q ss_pred hh-------hhhh------------hcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 821 NI-------ALDE------------MLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 821 ~~-------~~~~------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.. ...+ ...+..+ ...........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKP-LTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCC-HHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCC-hhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00 0000 0000000 00000112345889999999999999999999976
No 270
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.6e-36 Score=332.69 Aligned_cols=202 Identities=22% Similarity=0.293 Sum_probs=171.4
Q ss_pred HhcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CC-----ceeeEEeEEEe
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HR-----NIVKVYGFCLH 672 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~ 672 (873)
..++|++.+.||+|+||+||+|+.. +++.||||+++.. .....++..|+.+++.++ |+ +|+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 3578999999999999999999765 6889999998742 233567788999988884 55 49999999999
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC--CCCCeEEec
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD--FENEAHVSD 750 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~--~~~~~kl~D 750 (873)
.+..++||||++ ++|.+++..... ..+++..+..++.|++.|++|||++ ..+|+||||||+||+++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999997 599988865432 3489999999999999999999952 11899999999999995 467899999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccc
Q 039344 751 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 811 (873)
Q Consensus 751 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~ 811 (873)
||+++..... .....||+.|+|||++.+..++.++||||+||++|||+||+.||....
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999876532 334678999999999999999999999999999999999999998543
No 271
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.6e-37 Score=332.80 Aligned_cols=256 Identities=24% Similarity=0.329 Sum_probs=177.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHH-HHHhccCCceeeEEeEEEecceeEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVK-ALTEIWHRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~l 678 (873)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....++..|+. +++.++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 367899999999999999999874 789999999975422 223455666666 6777799999999999999999999
Q ss_pred EEEeccCCChhhHhcccc--cccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 679 VYEYFKMCSLAVILSNDA--AAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
||||+++ ++.+++.... ....+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999985 7777765321 2356899999999999999999999953 799999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccccccc----ccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCC
Q 039344 757 LKPDSSNWTELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRL 832 (873)
Q Consensus 757 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (873)
..... ......|++.|+|||.+ .+..++.++||||||+++|||++|+.||...... ............
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLTQVVKGDP 247 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHHHHhcCCC
Confidence 65432 22334789999999998 4566899999999999999999999998743211 001111111111
Q ss_pred CC-CCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 833 PT-PSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 833 ~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
+. +..........+.+++.+||+.||++||+++++++
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 10 00000111234889999999999999999999975
No 272
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.3e-36 Score=341.32 Aligned_cols=250 Identities=25% Similarity=0.382 Sum_probs=186.8
Q ss_pred cCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 680 (873)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+.+..++||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 345556889999999998877778999999998642 235678999999887 8999999999999999999999
Q ss_pred EeccCCChhhHhcccccccC----CChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC-------------
Q 039344 681 EYFKMCSLAVILSNDAAAKN----LGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE------------- 743 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~----~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~------------- 743 (873)
||+. |+|.+++........ .++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 699999976442111 13445678999999999999999 99999999999999754
Q ss_pred CCeEEeccccccccCCCCCC----cccccccccccccccccc-------CCCCCcchhHHHHHHHHHHHh-CCCCCcccc
Q 039344 744 NEAHVSDFGIAKFLKPDSSN----WTELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFIS 811 (873)
Q Consensus 744 ~~~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~sDv~s~G~il~el~t-g~~P~~~~~ 811 (873)
+.+||+|||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||+| |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 47999999999887654322 234579999999999875 568999999999999999999 999986432
Q ss_pred cchhhhhhhhhhhhhhcC-CCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 812 SMSFSSLNLNIALDEMLD-PRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
... ......... +.... .........+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~------~~i~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SRE------SNIIRGIFSLDEMKC--LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp THH------HHHHHTCCCCCCCTT--CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhH------HHHhcCCCCcccccc--cccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111 011111111 11111 111234456889999999999999999999985
No 273
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.5e-37 Score=332.25 Aligned_cols=244 Identities=20% Similarity=0.315 Sum_probs=198.6
Q ss_pred HhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcc---hhHHHHHHHHHHHHhcc--CCceeeEEeEEEec
Q 039344 600 ATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEM---TFQQEFLNEVKALTEIW--HRNIVKVYGFCLHV 673 (873)
Q Consensus 600 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~ 673 (873)
...+|++.+.||+|+||.||+|+. .+++.||||++........ ...+.+.+|+.+++.++ ||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 457799999999999999999975 5789999999875432221 11245678999999996 59999999999999
Q ss_pred ceeEEEEEeccC-CChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC-CCCCeEEecc
Q 039344 674 RHLFIVYEYFKM-CSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD-FENEAHVSDF 751 (873)
Q Consensus 674 ~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~~~kl~Df 751 (873)
+..++|||++.+ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999986 8999998643 4589999999999999999999999 999999999999999 7889999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCC-CCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCC
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDP 830 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 830 (873)
|+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ...
T Consensus 195 g~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------------~~~ 258 (320)
T 3a99_A 195 GSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--------------IRG 258 (320)
T ss_dssp TTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------------HHC
T ss_pred ccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh--------------hcc
Confidence 999876532 3344679999999999887766 67899999999999999999998642210 001
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 831 RLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
....+... ...+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 259 QVFFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111 124789999999999999999999986
No 274
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2e-36 Score=334.38 Aligned_cols=258 Identities=19% Similarity=0.299 Sum_probs=196.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-----------CCceeeEEe
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-----------HRNIVKVYG 668 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~ 668 (873)
..+|.+.+.||+|+||+||+|+. .+++.||||++.. .....+.+.+|+.++++++ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG----DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC----CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 36799999999999999999986 5789999999863 2233567889999999886 899999999
Q ss_pred EEEecc----eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC---
Q 039344 669 FCLHVR----HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD--- 741 (873)
Q Consensus 669 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~--- 741 (873)
++...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 998654 789999999 8999999865432 34899999999999999999999953 899999999999995
Q ss_pred ---CCCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhh
Q 039344 742 ---FENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSL 818 (873)
Q Consensus 742 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~ 818 (873)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......+...
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 3447999999999876532 3345789999999999999999999999999999999999999975432111000
Q ss_pred hh-hhhhhhh------------------cCCC-----CCC------------CCchhHHHHHHHHHHHhhcccCCCCCCC
Q 039344 819 NL-NIALDEM------------------LDPR-----LPT------------PSRNVHDKLISIVEVTISCVDENPESRP 862 (873)
Q Consensus 819 ~~-~~~~~~~------------------~~~~-----~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RP 862 (873)
.. .....+. .... ... ...........+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 00 0000000 0000 000 0001134456789999999999999999
Q ss_pred CHHHHHH
Q 039344 863 TMQKVCQ 869 (873)
Q Consensus 863 s~~ev~~ 869 (873)
|++|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999986
No 275
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=337.36 Aligned_cols=248 Identities=23% Similarity=0.324 Sum_probs=186.5
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 679 (873)
..+|...++||+|+||+||.....+|+.||||++..... ..+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 356888899999999997766666799999999864321 2356899999999 799999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCC-----CCeEEeccccc
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFE-----NEAHVSDFGIA 754 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~-----~~~kl~Dfg~a 754 (873)
|||+. |+|.+++.... ...++..+..++.||+.||+|||+. +|+||||||+||+++.+ ..+||+|||+|
T Consensus 97 ~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99997 59999986543 2355567789999999999999999 99999999999999532 35889999999
Q ss_pred cccCCCC---CCccccccccccccccccc---cCCCCCcchhHHHHHHHHHHHh-CCCCCcccccchhhhhhhhhhhhhh
Q 039344 755 KFLKPDS---SNWTELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSMSFSSLNLNIALDEM 827 (873)
Q Consensus 755 ~~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~sDv~s~G~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 827 (873)
+...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||....... .......
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-----~~~~~~~- 244 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-----ANILLGA- 244 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-----HHHHTTC-
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-----HHHHhcc-
Confidence 8765432 2234567999999999987 4567889999999999999999 999985322111 0000111
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 828 LDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.......+. ......+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CSLDCLHPE---KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCTTSCTT---CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCccccCcc---ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 011111111 122334789999999999999999999985
No 276
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5e-36 Score=328.88 Aligned_cols=257 Identities=18% Similarity=0.262 Sum_probs=196.9
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CC-cEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCc------eeeEEeEEEe
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SG-EIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN------IVKVYGFCLH 672 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~ 672 (873)
.++|++.+.||+|+||+||+|... ++ +.||+|+++.. ....+.+.+|+.+++.++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 368999999999999999999864 34 68999998642 233567889999999998776 9999999999
Q ss_pred cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee------------
Q 039344 673 VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL------------ 740 (873)
Q Consensus 673 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill------------ 740 (873)
.+..++||||+ ++++.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 456666664432 23589999999999999999999999 99999999999999
Q ss_pred -------CCCCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc
Q 039344 741 -------DFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM 813 (873)
Q Consensus 741 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~ 813 (873)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999865432 23467999999999999999999999999999999999999999754322
Q ss_pred hhhhhhhhh-------hhhhh------cCCC--CCCC-----------------CchhHHHHHHHHHHHhhcccCCCCCC
Q 039344 814 SFSSLNLNI-------ALDEM------LDPR--LPTP-----------------SRNVHDKLISIVEVTISCVDENPESR 861 (873)
Q Consensus 814 ~~~~~~~~~-------~~~~~------~~~~--~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~R 861 (873)
......... ..... .... +... ..........+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 110000000 00000 0000 0000 00001223468899999999999999
Q ss_pred CCHHHHHH
Q 039344 862 PTMQKVCQ 869 (873)
Q Consensus 862 Ps~~ev~~ 869 (873)
||++|+++
T Consensus 326 pt~~e~l~ 333 (355)
T 2eu9_A 326 ITLAEALL 333 (355)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999975
No 277
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=327.48 Aligned_cols=247 Identities=21% Similarity=0.323 Sum_probs=191.3
Q ss_pred HHHHhcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcc---hhHHHHHHHHHHHHhc----cCCceeeEEe
Q 039344 597 IIRATNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEM---TFQQEFLNEVKALTEI----WHRNIVKVYG 668 (873)
Q Consensus 597 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l----~h~niv~l~~ 668 (873)
.....++|++.+.||+|+||.||+|+. .+|+.||||++........ .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999976 4788999999975432211 1123466799999998 8999999999
Q ss_pred EEEecceeEEEEEe-ccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC-CCCCe
Q 039344 669 FCLHVRHLFIVYEY-FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD-FENEA 746 (873)
Q Consensus 669 ~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~~~ 746 (873)
++.+.+..++|||| +.+++|.+++... ..+++..++.++.|++.|++|||++ +|+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 99999999999999 7899999998653 3589999999999999999999999 999999999999999 88999
Q ss_pred EEeccccccccCCCCCCccccccccccccccccccCCCC-CcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhh
Q 039344 747 HVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALD 825 (873)
Q Consensus 747 kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 825 (873)
||+|||+++..... ......|++.|+|||++.+..+. .++||||+|+++|||++|+.||..... ..
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~- 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------IL- 246 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------HH-
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------Hh-
Confidence 99999999876543 33456789999999998877664 589999999999999999999864211 00
Q ss_pred hhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 826 EMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
......+... ...+.+++.+||+.||++|||++|+++
T Consensus 247 ---~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 ---EAELHFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ---HTCCCCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---hhccCCcccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111111 224789999999999999999999987
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-35 Score=327.87 Aligned_cols=310 Identities=18% Similarity=0.148 Sum_probs=238.8
Q ss_pred CCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCccccccccccee
Q 039344 19 NLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATL 98 (873)
Q Consensus 19 ~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 98 (873)
.+++++.|++++|.++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35788999999999986666668889999999999999997777889999999999999999998888888999999999
Q ss_pred eccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCc
Q 039344 99 YLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 99 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 178 (873)
+|++|+++...+..|.++++|++|++++|.+++..+..|..+++|++|++++|+++.+. +..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccccc
Confidence 99999998555555788999999999999998777778888999999999999887653 556788888999988887
Q ss_pred cCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhc
Q 039344 179 GSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYR 258 (873)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 258 (873)
+. ...++|++|++++|.++.. |.. ..++|++|++++|++++. ..+..+++|++|++++|.+++..|..|.
T Consensus 200 ~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 TL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp EE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 43 3345788888888888844 332 246788888888888753 4677888888888888888877788888
Q ss_pred CCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeee
Q 039344 259 NLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLD 338 (873)
Q Consensus 259 ~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 338 (873)
.+++|+.|++++|++.+.+..+..+++|++|++++|.+++++. .+..+++|++|++++|+++... +..+++|+.|+
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~ 345 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVER-NQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLT 345 (390)
T ss_dssp TCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCCCCGG-GHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEE
T ss_pred ccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcceecCc-cccccCcCCEEECCCCccceeC---chhhccCCEEE
Confidence 8888888888888887765556667777777777777765432 3455666666666666665331 44455555555
Q ss_pred eccccCC
Q 039344 339 FSINNIT 345 (873)
Q Consensus 339 l~~N~i~ 345 (873)
+++|.+.
T Consensus 346 l~~N~~~ 352 (390)
T 3o6n_A 346 LSHNDWD 352 (390)
T ss_dssp CCSSCEE
T ss_pred cCCCCcc
Confidence 5555554
No 279
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.9e-37 Score=352.76 Aligned_cols=261 Identities=24% Similarity=0.276 Sum_probs=200.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe------c
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH------V 673 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~ 673 (873)
.++|++.+.||+|+||.||+|.. .+|+.||||+++... .....+.+.+|++++++++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 36799999999999999999976 468999999987542 23345779999999999999999999999765 6
Q ss_pred ceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCC---eEEec
Q 039344 674 RHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENE---AHVSD 750 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~D 750 (873)
+..++||||+++|+|.+++........+++..++.++.|++.|++|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 67899999999999999998765555689999999999999999999999 9999999999999997775 99999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccc-hhhhhhhhh-----hh
Q 039344 751 FGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSM-SFSSLNLNI-----AL 824 (873)
Q Consensus 751 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~-~~~~~~~~~-----~~ 824 (873)
||.++...... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... .|....... ..
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998765433 334568999999999999999999999999999999999999998643211 111110000 00
Q ss_pred hhhc------CCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 039344 825 DEML------DPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKV 867 (873)
Q Consensus 825 ~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 867 (873)
.+.. ....+.+..........+.+++.+||+.||++|||++|+
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0001 111122222222344568999999999999999999764
No 280
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-35 Score=327.90 Aligned_cols=334 Identities=21% Similarity=0.187 Sum_probs=176.3
Q ss_pred CcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEe
Q 039344 116 LRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLY 195 (873)
Q Consensus 116 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 195 (873)
+++++.|++++|.++...+..|..+++|++|++++|.++.+.+..|..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45566666666666533333455566666666666666555555566666666666666666555555555555555555
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcC
Q 039344 196 LDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG 275 (873)
Q Consensus 196 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 275 (873)
+++|.++...+..|..+++|++|++++|++++..+..+..+++|++|++++|++++. .+..+++|
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L------------ 188 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSL------------ 188 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTC------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---cccccccc------------
Confidence 555555533333345555555555555555544444455555555555555555432 12333344
Q ss_pred cCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCC
Q 039344 276 PIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHS 355 (873)
Q Consensus 276 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~ 355 (873)
+.|++++|.++++ ...+.|++|++++|.+...... ..++|+.|++++|++++. ..++.+
T Consensus 189 -----------~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l 247 (390)
T 3o6n_A 189 -----------FHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNY 247 (390)
T ss_dssp -----------SEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGC
T ss_pred -----------ceeeccccccccc-----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCC
Confidence 4444444443321 1123444455555544432111 123455555555555432 344445
Q ss_pred CCCCEEeccCCccCCCCCccccccccccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcc
Q 039344 356 SQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSEL 435 (873)
Q Consensus 356 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L 435 (873)
++|++|+|++|.+++..|.. +..+++|+.|+|++|++++ +|..+..++ +|+.|
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~------------------------~~~l~~L~~L~L~~n~l~~-~~~~~~~l~--~L~~L 300 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHP------------------------FVKMQRLERLYISNNRLVA-LNLYGQPIP--TLKVL 300 (390)
T ss_dssp TTCSEEECCSSCCCEEESGG------------------------GTTCSSCCEEECCSSCCCE-EECSSSCCT--TCCEE
T ss_pred CCccEEECCCCcCCCcChhH------------------------ccccccCCEEECCCCcCcc-cCcccCCCC--CCCEE
Confidence 55555555555554433444 4444444444444444432 233333332 55666
Q ss_pred cccCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCCCCcccCCCcccccCCCCcc
Q 039344 436 DLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFKDAPIEALQGNKGLY 515 (873)
Q Consensus 436 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~ 515 (873)
+|++|++++ +|..+..+++|+.|+|++|+++... +..+++|++|++++|++.+.-.. ..+...+...+.++...|
T Consensus 301 ~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c 375 (390)
T 3o6n_A 301 DLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHC 375 (390)
T ss_dssp ECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCC
T ss_pred ECCCCccee-cCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCcee
Confidence 666666653 4555667778888888888877653 55677888888888888764221 223344444556666666
Q ss_pred cC
Q 039344 516 GD 517 (873)
Q Consensus 516 g~ 517 (873)
..
T Consensus 376 ~~ 377 (390)
T 3o6n_A 376 KI 377 (390)
T ss_dssp CT
T ss_pred cc
Confidence 53
No 281
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=325.00 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=178.4
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... ....+.+.++..+++.++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 367888999999999999999875 7899999999754322 22233445555568888999999999999999999999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHh-CCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHN-DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
|||+ ++.+..+.... ...+++..+..++.|++.|++|||+ . +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 45555554321 3458999999999999999999998 6 89999999999999999999999999997665
Q ss_pred CCCCCccccccccccccccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 759 PDSSNWTELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 759 ~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
... ......|++.|+|||.+. ...++.++||||+|+++|||++|+.||....... ..... ......+..+
T Consensus 177 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~-~~~~~~~~~~ 251 (318)
T 2dyl_A 177 DDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTK-VLQEEPPLLP 251 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH---HHHHH-HHHSCCCCCC
T ss_pred CCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH---HHHHH-HhccCCCCCC
Confidence 432 233457899999999984 4568899999999999999999999987432210 00000 0011111122
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
.... ....+.+++.+||+.||++||+++++++
T Consensus 252 ~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 GHMG----FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SSSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccCC----CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1111 1224889999999999999999999875
No 282
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3e-35 Score=344.71 Aligned_cols=335 Identities=21% Similarity=0.178 Sum_probs=176.3
Q ss_pred cccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEec
Q 039344 117 RSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYL 196 (873)
Q Consensus 117 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 196 (873)
.+++.|++++|.++...+..|..+++|++|+|++|.++++.+..|..+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 44555555555555333333445555555555555555444445555555555555555555444444444455555555
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCc
Q 039344 197 DTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP 276 (873)
Q Consensus 197 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 276 (873)
++|.++...+..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|.++ +.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------~~ 186 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT------------------------HV 186 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS------------------------BC
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC------------------------Cc
Confidence 555444333333444444444444444444444444444444444444444443 32
Q ss_pred CCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCC
Q 039344 277 IPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSS 356 (873)
Q Consensus 277 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~ 356 (873)
.+..+++|+.|++++|.++++ ...+.|+.|++++|.+....+.. .++|+.|+|++|.+++ +..++.++
T Consensus 187 --~~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~ 254 (597)
T 3oja_B 187 --DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYP 254 (597)
T ss_dssp --CGGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCT
T ss_pred --ChhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCC
Confidence 122334444444444444321 12234444555555444222211 1344555555554442 23344444
Q ss_pred CCCEEeccCCccCCCCCccccccccccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhccc
Q 039344 357 QLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELD 436 (873)
Q Consensus 357 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~ 436 (873)
+|+.|+|++|.++ +..|..+..+++|+.|+|++|++++ +|..+..++ +|+.|+
T Consensus 255 ~L~~L~Ls~N~l~------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~--~L~~L~ 307 (597)
T 3oja_B 255 GLVEVDLSYNELE------------------------KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIP--TLKVLD 307 (597)
T ss_dssp TCSEEECCSSCCC------------------------EEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCT--TCCEEE
T ss_pred CCCEEECCCCccC------------------------CCCHHHhcCccCCCEEECCCCCCCC-CCcccccCC--CCcEEE
Confidence 4444444444444 4444445555555555555555543 344443333 666777
Q ss_pred ccCCccCcccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCCCCcccCCCcccccCCCCccc
Q 039344 437 LSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPNSTTFKDAPIEALQGNKGLYG 516 (873)
Q Consensus 437 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~g 516 (873)
|++|.++ .+|..+..+++|+.|+|++|++++.. +..+++|+.|+|++|+|.+..+. ..+.......+.++...|+
T Consensus 308 Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~ 382 (597)
T 3oja_B 308 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCK 382 (597)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCC
T ss_pred CCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCC
Confidence 7777766 35666778888889999999888664 55678899999999999876432 2355556666788888888
Q ss_pred Ccc
Q 039344 517 DVK 519 (873)
Q Consensus 517 ~~~ 519 (873)
.+.
T Consensus 383 ~~~ 385 (597)
T 3oja_B 383 IDY 385 (597)
T ss_dssp TTC
T ss_pred cch
Confidence 643
No 283
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.4e-35 Score=318.80 Aligned_cols=306 Identities=27% Similarity=0.384 Sum_probs=161.6
Q ss_pred cCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccce
Q 039344 18 RNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLAT 97 (873)
Q Consensus 18 ~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 97 (873)
..+++|++|++++|+++ .+|. |..+++|++|++++|++++. +. +..+++|++|++++|.++. + .+|..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCE
Confidence 34455555555555554 2222 55555555555555555532 22 5555555555555555553 2 23555555555
Q ss_pred eeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcC
Q 039344 98 LYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNF 177 (873)
Q Consensus 98 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 177 (873)
|++++|++++. +. +..+++|++|++++|..... +..+..+++|++|++++|.+....+
T Consensus 115 L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~------------------- 172 (347)
T 4fmz_A 115 LYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP------------------- 172 (347)
T ss_dssp EECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGG-------------------
T ss_pred EECcCCcccCc-hh-hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchh-------------------
Confidence 55555555422 22 44455555555555533322 2224444455555555444443322
Q ss_pred ccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhh
Q 039344 178 NGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEY 257 (873)
Q Consensus 178 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 257 (873)
+..+++|++|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|++|++++|++++..+ +
T Consensus 173 -------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~ 239 (347)
T 4fmz_A 173 -------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--L 239 (347)
T ss_dssp -------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred -------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--h
Confidence 4444455555555555542221 4445555555555555543322 4455555555555555554332 5
Q ss_pred cCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCee
Q 039344 258 RNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTL 337 (873)
Q Consensus 258 ~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 337 (873)
..+++|++|++++|.+... +.+..+++|++|++++|.++++ ..+..+++|++|++++|.+++..+..+..+++|+.|
T Consensus 240 ~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 240 ANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred hcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 5555555555555555543 3455556666666666666654 345566667777777777766666666667777777
Q ss_pred eeccccCCccCCccccCCCCCCEEeccCCccC
Q 039344 338 DFSINNITGNVPPEIGHSSQLGVLDLSSNHIV 369 (873)
Q Consensus 338 ~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~ 369 (873)
++++|++++..| ++.+++|++|++++|.|+
T Consensus 317 ~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 317 FLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EccCCccccccC--hhhhhccceeehhhhccc
Confidence 777777765444 666777777777777764
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.7e-35 Score=318.65 Aligned_cols=306 Identities=26% Similarity=0.401 Sum_probs=249.8
Q ss_pred cCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcE
Q 039344 66 GNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLAT 145 (873)
Q Consensus 66 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 145 (873)
..+++|++|++++|.+.. ++ .+..+++|++|++++|++++. +. +.++++|++|++++|.++. ++ .|..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 455666666666666663 33 366667777777777777643 33 6777777777777777763 33 5778888888
Q ss_pred EEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCccc
Q 039344 146 LYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKL 225 (873)
Q Consensus 146 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 225 (873)
|++++|.+..+.+ +..+++|++|++++|..... +..+..+++|++|++++|.+....+ +..+++|++|++++|++
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 8888888876544 78888888899988865533 3448899999999999999985443 88999999999999999
Q ss_pred CCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccc
Q 039344 226 SGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFY 305 (873)
Q Consensus 226 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 305 (873)
.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++....+ +..+++|++|++++|.++++ ..+.
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~ 262 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVK 262 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGT
T ss_pred ccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHh
Confidence 86544 8899999999999999987655 8899999999999999997655 88999999999999999986 4688
Q ss_pred cCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEE
Q 039344 306 IYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKL 385 (873)
Q Consensus 306 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 385 (873)
.+++|++|++++|.+++. ..+..+++|+.|++++|++++..+..++.+++|++|+|++|.+++..| +..+++|++|
T Consensus 263 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 338 (347)
T 4fmz_A 263 DLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSA 338 (347)
T ss_dssp TCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEE
T ss_pred cCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhcccee
Confidence 999999999999999864 468889999999999999998888999999999999999999997666 8899999999
Q ss_pred EecCcccc
Q 039344 386 VLAHNQLS 393 (873)
Q Consensus 386 ~L~~N~l~ 393 (873)
++++|.|+
T Consensus 339 ~l~~N~i~ 346 (347)
T 4fmz_A 339 DFANQVIK 346 (347)
T ss_dssp SSSCC---
T ss_pred ehhhhccc
Confidence 99999986
No 285
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1e-35 Score=314.41 Aligned_cols=230 Identities=11% Similarity=0.043 Sum_probs=183.4
Q ss_pred cCCCCCceeeecCCeEEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEEE
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 680 (873)
++|++.+.||+|+||.||+|+.. +|+.||||++...........+.+.+|+..++.++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999875 58999999998765555555678999999999999999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||+++++|.+++... ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999998532 35567889999999999999999 99999999999999999999998554
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhH
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVH 840 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 840 (873)
|++ .++.++||||+||++|||+||+.||............. ...............
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 230 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE-----RDTAGQPIEPADIDR 230 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC-----BCTTSCBCCHHHHCT
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH-----HHhccCCCChhhccc
Confidence 333 26789999999999999999999998544321000000 000111111000001
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHhc
Q 039344 841 DKLISIVEVTISCVDENPESRPTMQKVCQLLK 872 (873)
Q Consensus 841 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 872 (873)
.....+.+++.+||+.||++| |++|+++.|+
T Consensus 231 ~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 231 DIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 122358899999999999999 9999999874
No 286
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2e-34 Score=337.67 Aligned_cols=288 Identities=18% Similarity=0.152 Sum_probs=215.9
Q ss_pred CCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceee
Q 039344 20 LKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLY 99 (873)
Q Consensus 20 l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (873)
+.+++.|++++|.++.+.+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 46788888888888877777788888899999999988887788888888899999998888888888888888888888
Q ss_pred ccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCcc
Q 039344 100 LDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNG 179 (873)
Q Consensus 100 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 179 (873)
|++|.++...+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.++++. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 8888888665566788888888888888888777778888888888888888887653 4556788888888888764
Q ss_pred CCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcC
Q 039344 180 SIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRN 259 (873)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 259 (873)
. ...++|+.|++++|.++...+ .+ .++|+.|+|++|.+++ +..+..+++|++|+|++|.+++..|..|..
T Consensus 207 l-----~~~~~L~~L~ls~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 L-----AIPIAVEELDASHNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp E-----ECCTTCSEEECCSSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----cCCchhheeeccCCccccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 2 334578888888888874332 22 2578888888888775 356777778888888888877777777777
Q ss_pred CCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCcccc
Q 039344 260 LVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFY 321 (873)
Q Consensus 260 l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 321 (873)
+++|+.|+|++|.+.+.+..+..+++|+.|+|++|.++.++ ..+..+++|++|+|++|.+.
T Consensus 277 l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~~i~-~~~~~l~~L~~L~L~~N~l~ 337 (597)
T 3oja_B 277 MQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLHVE-RNQPQFDRLENLYLDHNSIV 337 (597)
T ss_dssp CSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCCCCG-GGHHHHTTCSEEECCSSCCC
T ss_pred ccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCCccC-cccccCCCCCEEECCCCCCC
Confidence 77777777777777765555555666666666666665432 23344555555555555554
No 287
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.3e-34 Score=309.09 Aligned_cols=230 Identities=20% Similarity=0.268 Sum_probs=178.7
Q ss_pred cCCCCC-ceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHH-HhccCCceeeEEeEEEe----cc
Q 039344 602 NDFDDE-HCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKAL-TEIWHRNIVKVYGFCLH----VR 674 (873)
Q Consensus 602 ~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~ 674 (873)
++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 557666 7899999999999976 5789999999863 14577888887 55589999999999987 67
Q ss_pred eeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCC---CCCeEEecc
Q 039344 675 HLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDF---ENEAHVSDF 751 (873)
Q Consensus 675 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~kl~Df 751 (873)
..++||||+++++|.+++.... ...+++..++.++.|++.|++|||++ +|+||||||+||+++. ++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 8899999999999999997543 23589999999999999999999999 9999999999999998 788999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCC
Q 039344 752 GIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPR 831 (873)
Q Consensus 752 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (873)
|+++... +..++.++||||+||++|||++|+.||........... ....+....
T Consensus 165 g~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~----~~~~~~~~~ 218 (299)
T 3m2w_A 165 GFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG----MKTRIRMGQ 218 (299)
T ss_dssp TTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC----SCCSSCTTC
T ss_pred ccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH----HHHHHhhcc
Confidence 9987533 23467789999999999999999999864332211000 011111112
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 832 LPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
...+..........+.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 22121111122345889999999999999999999986
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7e-35 Score=346.24 Aligned_cols=236 Identities=25% Similarity=0.354 Sum_probs=190.7
Q ss_pred hcCCCCCceeeecCCeEEEEEEeC--CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEecce---
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLA--SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLHVRH--- 675 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 675 (873)
.++|++.+.||+|+||+||+|+.. +|+.||||++... ......+.+.+|+.++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 368999999999999999999875 6899999998753 233445678999999999999999999999987665
Q ss_pred --eEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEecccc
Q 039344 676 --LFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGI 753 (873)
Q Consensus 676 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 753 (873)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999887643 589999999999999999999999 99999999999999975 999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCC
Q 039344 754 AKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLP 833 (873)
Q Consensus 754 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (873)
++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||...... ..+
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------~~~ 285 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------GLP 285 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------SCC
T ss_pred chhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-----------------ccc
Confidence 9876543 3457999999999987654 88999999999999999999886531110 001
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCCCCCCC-HHHHHHH
Q 039344 834 TPSRNVHDKLISIVEVTISCVDENPESRPT-MQKVCQL 870 (873)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ev~~~ 870 (873)
.. .........+.+++.+||+.||++||+ ++++.+.
T Consensus 286 ~~-~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~ 322 (681)
T 2pzi_A 286 ED-DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQ 322 (681)
T ss_dssp TT-CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred cc-ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHH
Confidence 11 111122345889999999999999996 4445443
No 289
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.2e-33 Score=306.25 Aligned_cols=287 Identities=23% Similarity=0.243 Sum_probs=196.3
Q ss_pred CCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccc
Q 039344 46 NLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLN 125 (873)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (873)
+++.+++++|.++ .+|..+. ++|++|+|++|.+++..+.+|.++++|++|+|++|++++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5677777777776 5565553 567777777777776666677777777777777777776666777777777777777
Q ss_pred ccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCcc--CCCccccCCCCCcEEeccCCCCcc
Q 039344 126 NNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNG--SIPPSLGNLSNLATLYLDTNSLSY 203 (873)
Q Consensus 126 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~l~~ 203 (873)
+|.++ .+|..+. ++|++|++++|+++.+.+..|..+++|++|++++|.++. ..+..+..+ +|++|++++|.++.
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 77776 4454443 677777777777777766677777777777777777753 556666666 77888888887774
Q ss_pred cCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCC
Q 039344 204 SIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNL 283 (873)
Q Consensus 204 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l 283 (873)
+|..+. ++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++...+..+..+
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l 263 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDL 263 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGC
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcC
Confidence 444443 67788888888887776677778888888888888888777777777888888888888777665567777
Q ss_pred CCCCeEEccCccccccccccccc------CCCccEEeccCcccc--ccCCCCCCCCCCCCeeeeccc
Q 039344 284 TSLERVRLDRNYLTGNISESFYI------YPNLTYIDLSQNNFY--GEISSDWGRCPKLSTLDFSIN 342 (873)
Q Consensus 284 ~~L~~L~L~~n~l~~~~~~~~~~------~~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~l~~N 342 (873)
++|++|++++|.+++++...|.. .+.|+.|++++|.+. +..+..|..+++|+.|++++|
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred ccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 77777777777777666655543 234555555555554 334444445555555555544
No 290
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-35 Score=328.11 Aligned_cols=244 Identities=14% Similarity=0.116 Sum_probs=180.0
Q ss_pred cCCCCCceeeecCCeEEEEEEe-CCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccC-Ccee---------------
Q 039344 602 NDFDDEHCIGKGGQGSVYMSKL-ASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH-RNIV--------------- 664 (873)
Q Consensus 602 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv--------------- 664 (873)
..|...+.||+|+||+||+|+. .+|+.||||++...........+.+.+|+.+++.++| +|..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4577789999999999999984 5799999999885433333335779999999999976 2211
Q ss_pred e------EEeEEEe-----cceeEEEEEeccCCChhhHhccc----ccccCCChHHHHHHHHHHHHHHHHHHhCCCCCee
Q 039344 665 K------VYGFCLH-----VRHLFIVYEYFKMCSLAVILSND----AAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIV 729 (873)
Q Consensus 665 ~------l~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~ 729 (873)
. +..++.. ....+++|+++ +++|.+++... .....+++..++.++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1 1111111 12356677754 58898888421 1234477889999999999999999999 999
Q ss_pred eCCCCCCCeeeCCCCCeEEeccccccccCCCCCCcccccccccccccccc----------ccCCCCCcchhHHHHHHHHH
Q 039344 730 HRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELA----------YTMKVTEKCDVYSFGVLALE 799 (873)
Q Consensus 730 H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~sDv~s~G~il~e 799 (873)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999865432 344577 999999998 55568889999999999999
Q ss_pred HHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 039344 800 VIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQ 869 (873)
Q Consensus 800 l~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 869 (873)
|++|+.||........ ........... ...+.+++.+||+.||++||++.++++
T Consensus 310 lltg~~Pf~~~~~~~~--------~~~~~~~~~~~--------~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALGG--------SEWIFRSCKNI--------PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGSC--------SGGGGSSCCCC--------CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhhh--------HHHHHhhcccC--------CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999875432211 11122211111 124889999999999999999888764
No 291
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=9.1e-35 Score=315.85 Aligned_cols=245 Identities=15% Similarity=0.131 Sum_probs=187.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCC-----cchhHHHHHHHHHHHHhcc---------CCceeeE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPG-----EMTFQQEFLNEVKALTEIW---------HRNIVKV 666 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~---------h~niv~l 666 (873)
.++|++.+.||+|+||+||+|+. +|+.||||++...... .....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 36688999999999999999988 5899999999765321 2233577899999999886 7777777
Q ss_pred EeEEE-----------------e-------------cceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHH
Q 039344 667 YGFCL-----------------H-------------VRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDA 716 (873)
Q Consensus 667 ~~~~~-----------------~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~ 716 (873)
.+++. + .+..|+||||+++|++.+.+.+ ..+++..+..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 76643 2 6789999999999976666633 348999999999999999
Q ss_pred HHHHH-hCCCCCeeeCCCCCCCeeeCCCC--------------------CeEEeccccccccCCCCCCcccccccccccc
Q 039344 717 LSYMH-NDCFPPIVHRDISSKNVLLDFEN--------------------EAHVSDFGIAKFLKPDSSNWTELAGTYGYVA 775 (873)
Q Consensus 717 l~~LH-~~~~~~i~H~Dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~a 775 (873)
|+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3479999999
Q ss_pred ccccccCCCCCcchhHHHHHH-HHHHHhCCCCCcccccchhhhhhhhhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcc
Q 039344 776 PELAYTMKVTEKCDVYSFGVL-ALEVIKGKHPRDFISSMSFSSLNLNIALDEMLDPRLPTPSRNVHDKLISIVEVTISCV 854 (873)
Q Consensus 776 PE~~~~~~~~~~sDv~s~G~i-l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 854 (873)
||++.+.. +.++||||+|++ .+++++|..||... .|.............. ...............+.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---LWLHYLTDKMLKQMTF-KTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---HHHHHHHHHHHHTCCC-SSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcch---hhhhHHHHhhhhhhcc-CcccchhhhhhcCHHHHHHHHHHh
Confidence 99998766 889999998776 77889999997421 1111111111111111 111222233455667999999999
Q ss_pred cCCCCCCCCHHHHH
Q 039344 855 DENPESRPTMQKVC 868 (873)
Q Consensus 855 ~~dP~~RPs~~ev~ 868 (873)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999988
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.8e-33 Score=301.45 Aligned_cols=288 Identities=22% Similarity=0.233 Sum_probs=172.2
Q ss_pred CCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccc
Q 039344 46 NLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLN 125 (873)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (873)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5666666666666 4554443 456666666666665555566666666666666666665556666666666666666
Q ss_pred ccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCcc--CCCccccCCCCCcEEeccCCCCcc
Q 039344 126 NNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNG--SIPPSLGNLSNLATLYLDTNSLSY 203 (873)
Q Consensus 126 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~l~~ 203 (873)
+|.++ .+|..+. ++|++|++++|+++.+.+..|.++++|++|++++|.++. ..+..+.++++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 66666 3444333 566666666666666666666666666666666666643 455566666666666666666663
Q ss_pred cCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCC
Q 039344 204 SIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNL 283 (873)
Q Consensus 204 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l 283 (873)
+|..+. ++|++|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|++...+..+..+
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l 262 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADH 262 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTC
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccC
Confidence 333332 56677777777766555666666677777777777766666666666677777777777666555556666
Q ss_pred CCCCeEEccCcccccccccccccC------CCccEEeccCccccc--cCCCCCCCCCCCCeeeeccc
Q 039344 284 TSLERVRLDRNYLTGNISESFYIY------PNLTYIDLSQNNFYG--EISSDWGRCPKLSTLDFSIN 342 (873)
Q Consensus 284 ~~L~~L~L~~n~l~~~~~~~~~~~------~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~l~~N 342 (873)
++|++|++++|.+++++...|... +.++.|++++|.+.. ..|..|..+++++.++|++|
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 666666666666666655555322 344444444444431 22333333444444444433
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.5e-32 Score=297.54 Aligned_cols=287 Identities=21% Similarity=0.258 Sum_probs=151.2
Q ss_pred cCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccC
Q 039344 119 LSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDT 198 (873)
Q Consensus 119 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 198 (873)
++.++++++.++ .+|..+. ++|+.|++++|.++++.+..|.++++|++|+|++|.+++..|..|..+++|++|++++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 444444444444 2333322 3444555555555444444455555555555555555544444555555555555555
Q ss_pred CCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCC--CCchhhcCCCCCcEEEccCCcCcCc
Q 039344 199 NSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSG--AIPYEYRNLVKLTILLLGHNQFRGP 276 (873)
Q Consensus 199 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~ 276 (873)
|.++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|.++. ..+..+..+++|++|++++|++...
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l 186 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 186 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC
Confidence 5554 2332222 455555555555554444445555555555555555532 4445555666666666666665543
Q ss_pred CCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCC
Q 039344 277 IPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSS 356 (873)
Q Consensus 277 ~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~ 356 (873)
+..+. ++|++|++++|.++++.+..|..+++|++|+|++|.+++..+..+..+++|+.|++++|+++ .+|..+..++
T Consensus 187 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 263 (330)
T 1xku_A 187 PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 263 (330)
T ss_dssp CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS
T ss_pred Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCC
Confidence 33222 56666666666666665666666666666666666666555556666666666666666666 4555666666
Q ss_pred CCCEEeccCCccCCCCCccccc------cccccEEEecCccccC--Cccccccccccccccccccc
Q 039344 357 QLGVLDLSSNHIVGEIPIELGK------LNFFIKLVLAHNQLSG--QLSPKLGSLVQLEHLDLSSN 414 (873)
Q Consensus 357 ~L~~L~Ls~N~i~~~~~~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N 414 (873)
+|++|+|++|.|++..+..+.. ...++.|++++|.+.. ..|..|..+.+++.++|++|
T Consensus 264 ~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 264 YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 6666666666666544444432 2344455555554432 33344444555555555554
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=9.5e-33 Score=299.27 Aligned_cols=289 Identities=22% Similarity=0.297 Sum_probs=120.4
Q ss_pred ccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEcc
Q 039344 94 NLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLS 173 (873)
Q Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 173 (873)
+|+.++++++.++ .+|..+. ++|++|++++|.+++..+..|..+++|++|++++|+++.+.+..|..+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4555555555554 3333332 344444554444443334444444444444444444444444444444444444444
Q ss_pred CCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCC
Q 039344 174 ENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAI 253 (873)
Q Consensus 174 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 253 (873)
+|+++. +|..+. ++|++|++++|.++...+..|..+++|++|++++|.++. .+..
T Consensus 111 ~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~ 165 (332)
T 2ft3_A 111 KNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN----------------------SGFE 165 (332)
T ss_dssp SSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG----------------------GGSC
T ss_pred CCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc----------------------CCCC
Confidence 444442 222221 344444444444443333333444444444444444321 0122
Q ss_pred chhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCC
Q 039344 254 PYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPK 333 (873)
Q Consensus 254 ~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 333 (873)
+..+..+ +|+.|++++|++++.+..+. ++|++|++++|.++++.+..|..+++|++|++++|++.+..+..+..+++
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 242 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPT 242 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTT
T ss_pred cccccCC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCC
Confidence 3333333 33333333333333222111 34444444444444444444444444444444444444444444444444
Q ss_pred CCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccc------cccccEEEecCcccc--CCcccccccccc
Q 039344 334 LSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGK------LNFFIKLVLAHNQLS--GQLSPKLGSLVQ 405 (873)
Q Consensus 334 L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~------l~~L~~L~L~~N~l~--~~~~~~~~~l~~ 405 (873)
|+.|++++|+++ .+|..+..+++|+.|++++|.|++..+..+.. ...|+.|++++|.+. +..+..+..+++
T Consensus 243 L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~ 321 (332)
T 2ft3_A 243 LRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTD 321 (332)
T ss_dssp CCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCC
T ss_pred CCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccch
Confidence 444444444444 34444444444444444444444333333322 123444444444443 233344444444
Q ss_pred ccccccccc
Q 039344 406 LEHLDLSSN 414 (873)
Q Consensus 406 L~~L~Ls~N 414 (873)
|+.|+|++|
T Consensus 322 L~~l~l~~n 330 (332)
T 2ft3_A 322 RLAIQFGNY 330 (332)
T ss_dssp STTEEC---
T ss_pred hhhhhcccc
Confidence 444444444
No 295
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=8.3e-37 Score=347.71 Aligned_cols=158 Identities=23% Similarity=0.257 Sum_probs=71.7
Q ss_pred CCCCEEEcccCCCCCCCCcc-cccccccceeeccccccCC----CCCccccCCcccCcccccccccccccCccc-cCCC-
Q 039344 69 RFFSDLELSNNKLSGSIPPS-LGNLSNLATLYLDTNSLSN----SIPSELGNLRSLSNLQLNNNILSGSIPHSL-GNLT- 141 (873)
Q Consensus 69 ~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~- 141 (873)
++|++|+|++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34556666666655322222 4555566666666665552 123444455555555555555543222222 2233
Q ss_pred ---CCcEEEccCCCCcc----ccccccCCCCCCCEEEccCCcCccCCCccc-----cCCCCCcEEeccCCCCcccC----
Q 039344 142 ---NLATLYIYSNSLSA----SILGKIGNLKSLSNLQLSENNFNGSIPPSL-----GNLSNLATLYLDTNSLSYSI---- 205 (873)
Q Consensus 142 ---~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-----~~l~~L~~L~L~~n~l~~~~---- 205 (873)
+|++|+|++|+++. ..+..+..+++|++|+|++|.+++..+..+ ...++|++|++++|.++...
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 35555555555542 123444455555555555555443222111 11234555555555444322
Q ss_pred CccccCCCCCCEEEccCcccC
Q 039344 206 PSELGNLRSLSNLSLGYNKLS 226 (873)
Q Consensus 206 ~~~~~~l~~L~~L~L~~N~l~ 226 (873)
+..+..+++|++|++++|.++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHhhCCCCCEEECcCCCcc
Confidence 223333444444444444443
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3e-33 Score=299.90 Aligned_cols=256 Identities=27% Similarity=0.471 Sum_probs=161.2
Q ss_pred CCccEEecccccCCC--CCchhhcCCCCCcEEEccC-CcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEE
Q 039344 237 SNLTYLNLFENSLSG--AIPYEYRNLVKLTILLLGH-NQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYI 313 (873)
Q Consensus 237 ~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 313 (873)
.+++.|+|++|.+++ ..|..+.++++|++|++++ |.+.+ ..+..|..+++|++|
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~-----------------------~~p~~l~~l~~L~~L 106 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG-----------------------PIPPAIAKLTQLHYL 106 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES-----------------------CCCGGGGGCTTCSEE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccc-----------------------cCChhHhcCCCCCEE
Confidence 467777777777776 5666666666666666663 55554 333334444444444
Q ss_pred eccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccc-cccEEEecCccc
Q 039344 314 DLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLN-FFIKLVLAHNQL 392 (873)
Q Consensus 314 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~-~L~~L~L~~N~l 392 (873)
+|++|.+++..|..|..+++|++|++++|.+++.+|..++.+++|++|+|++|.+++.+|..+..+. +|+.|++++|++
T Consensus 107 ~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp EEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred ECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee
Confidence 4444444444444444555555555555555544555555555555555555555545555555554 555555555555
Q ss_pred cCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCCch
Q 039344 393 SGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLIPS 472 (873)
Q Consensus 393 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 472 (873)
++..|..+..+. |+.|+|++|++++..|..+..+. +|+.|+|++|.+++.+|. +..+++|++|+|++|++++.+|.
T Consensus 187 ~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~ 262 (313)
T 1ogq_A 187 TGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDK--NTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp EEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTS--CCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG
T ss_pred eccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCC--CCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCCh
Confidence 555555555554 66666666666555555555544 666666666666654444 56677888888888888888888
Q ss_pred hhhccCCCcEEecCCCcccccCCCCCcccCCCcccccCCCCcccCcc
Q 039344 473 CFEKMNGLLHIDISYNELRGSIPNSTTFKDAPIEALQGNKGLYGDVK 519 (873)
Q Consensus 473 ~~~~~~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~g~~~ 519 (873)
.|..+++|++|+|++|+++|.+|....++......+.+|+.+||.+.
T Consensus 263 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 263 GLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred HHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 88888888888888888888888887777777788888888888654
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2e-36 Score=344.65 Aligned_cols=158 Identities=22% Similarity=0.249 Sum_probs=83.1
Q ss_pred CCCCEEECCCCcccccCCcc-ccCCCCCceEEccCCcccc----cCCCCccCCCCCCEEEcccCCCCCCCCcccc-ccc-
Q 039344 21 KSLSDLELGNNKLSGSIPHS-LGNLTNLATLYIHTNSLSG----SIPGEIGNFRFFSDLELSNNKLSGSIPPSLG-NLS- 93 (873)
Q Consensus 21 ~~l~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~- 93 (873)
+.|++|||++|+++...... |..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34667777777776443332 6667777777777777663 2355566666777777777766543332222 233
Q ss_pred ---ccceeeccccccCC----CCCccccCCcccCcccccccccccccCcccc-----CCCCCcEEEccCCCCcccc----
Q 039344 94 ---NLATLYLDTNSLSN----SIPSELGNLRSLSNLQLNNNILSGSIPHSLG-----NLTNLATLYIYSNSLSASI---- 157 (873)
Q Consensus 94 ---~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~---- 157 (873)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|+++...
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 46666666666552 2345555555555555555555433222221 1334555555555554322
Q ss_pred ccccCCCCCCCEEEccCCcCc
Q 039344 158 LGKIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 158 ~~~~~~l~~L~~L~L~~n~i~ 178 (873)
+..+..+++|++|++++|.++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHhhCCCCCEEECcCCCcc
Confidence 222333444444444444443
No 298
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1e-32 Score=295.74 Aligned_cols=249 Identities=28% Similarity=0.456 Sum_probs=185.6
Q ss_pred CCCceEEccCCcccc--cCCCCccCCCCCCEEEccc-CCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCc
Q 039344 45 TNLATLYIHTNSLSG--SIPGEIGNFRFFSDLELSN-NKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSN 121 (873)
Q Consensus 45 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (873)
.++++|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467777777777776 6777777777777777774 7777777777777777777777777777677777777777777
Q ss_pred ccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCC-CCCEEEccCCcCccCCCccccCCCCCcEEeccCCC
Q 039344 122 LQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLK-SLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNS 200 (873)
Q Consensus 122 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 200 (873)
|+|++|.+++.+|..|..+++|++|++++|++++..+..+..++ +|++|+|++|++++..|..+..++ |++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 77777777777777777777777777777777766666777776 777777777777777777777776 7777777777
Q ss_pred CcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcC
Q 039344 201 LSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPIL 280 (873)
Q Consensus 201 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l 280 (873)
+++..|..|..+++|++|+|++|++++..+. +..+++|++|+|++|++++..|..+..+++|+.|++++|++++..+..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 7777777777777788888888877755444 667777888888888777777777777777777777777777665555
Q ss_pred CCCCCCCeEEccCcc
Q 039344 281 RNLTSLERVRLDRNY 295 (873)
Q Consensus 281 ~~l~~L~~L~L~~n~ 295 (873)
..+++|+.|++++|.
T Consensus 288 ~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 GNLQRFDVSAYANNK 302 (313)
T ss_dssp TTGGGSCGGGTCSSS
T ss_pred ccccccChHHhcCCC
Confidence 666677777776665
No 299
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=1.6e-32 Score=322.93 Aligned_cols=393 Identities=13% Similarity=0.071 Sum_probs=206.4
Q ss_pred cccccceeeccccccCCCCCccccC-Cc-ccCcccccccc-ccc-ccCccccCCCCCcEEEccCCCCcccc----ccccC
Q 039344 91 NLSNLATLYLDTNSLSNSIPSELGN-LR-SLSNLQLNNNI-LSG-SIPHSLGNLTNLATLYIYSNSLSASI----LGKIG 162 (873)
Q Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~-l~-~L~~L~L~~n~-l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~ 162 (873)
.+++|++|+|++|.+++..+..+.. ++ +|++|+|++|. ++. .++.....+++|++|+|++|.+++.. ...+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 3444445555444444333333332 22 25555554443 110 01111224455555555555443321 11233
Q ss_pred CCCCCCEEEccCCcCccC----CCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccC---CCcccccCC
Q 039344 163 NLKSLSNLQLSENNFNGS----IPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLS---GSIPISMGN 235 (873)
Q Consensus 163 ~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~ 235 (873)
.+++|++|++++|.+++. ++..+..+++|++|++++|.+.+ .+..+..+++|++|+++.+... ...+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 445555555555555421 22233345555555555555553 4445555566666665542221 122234455
Q ss_pred CCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCc--CCcCCCCCCCCeEEccCcccccc-cccccccCCCccE
Q 039344 236 LSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP--IPILRNLTSLERVRLDRNYLTGN-ISESFYIYPNLTY 312 (873)
Q Consensus 236 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~~~~L~~ 312 (873)
+++|+.|+++++... ..|..+..+++|++|++++|.+... ...+..+++|++|+++ +.+++. ....+..+++|++
T Consensus 269 ~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCE
T ss_pred cccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCE
Confidence 566666666654322 3455555666666666666665431 1224556666666666 333322 2223345666777
Q ss_pred EeccC-----------ccccccCCCC-CCCCCCCCeeeeccccCCccCCccccC-CCCCCEEecc----CCccCCC----
Q 039344 313 IDLSQ-----------NNFYGEISSD-WGRCPKLSTLDFSINNITGNVPPEIGH-SSQLGVLDLS----SNHIVGE---- 371 (873)
Q Consensus 313 L~Ls~-----------N~l~~~~~~~-~~~l~~L~~L~l~~N~i~~~~~~~~~~-~~~L~~L~Ls----~N~i~~~---- 371 (873)
|++++ |.+++..... ...+++|+.|+++.|++++..+..++. +++|+.|+++ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 77772 4444322111 234677777777777776655555554 6777777775 5666643
Q ss_pred -CCccccccccccEEEecCc--cccCCcccccc-cccccccccccccccccc-cCCCcCchhhhhhhcccccCCccCcc-
Q 039344 372 -IPIELGKLNFFIKLVLAHN--QLSGQLSPKLG-SLVQLEHLDLSSNRLSNS-IPKSLGNLELIHLSELDLSRNFLREA- 445 (873)
Q Consensus 372 -~~~~~~~l~~L~~L~L~~N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~~~L~~L~Ls~N~l~~~- 445 (873)
++..+.++++|+.|++++| .+++..+..+. .+++|+.|+|++|++++. ++..+..+. +|++|+|++|.+++.
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~--~L~~L~l~~n~l~~~~ 504 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCP--NLQKLEMRGCCFSERA 504 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCT--TCCEEEEESCCCBHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCc--ccCeeeccCCCCcHHH
Confidence 2223556777777777643 35544444443 367788888888877642 233334433 777888888887654
Q ss_pred cchhhhhhcccceecccCccccCCCchhh-hccCCCcEEecCCC
Q 039344 446 IPSQICIMQSLEKLNLSHNSLSGLIPSCF-EKMNGLLHIDISYN 488 (873)
Q Consensus 446 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~L~~l~ls~N 488 (873)
++..+..+++|++|+|++|+++..-...+ ..++.+....+..+
T Consensus 505 ~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 505 IAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 33444567888888888888876544333 34566665555443
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=282.74 Aligned_cols=283 Identities=19% Similarity=0.181 Sum_probs=167.0
Q ss_pred CCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEE
Q 039344 187 NLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTIL 266 (873)
Q Consensus 187 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 266 (873)
.++.....++++|.++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|++++..+..|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3445556777777777 4554443 467777777777775555566777777777777777766666666666666666
Q ss_pred EccCCcCcCcCCc-CCCCCCCCeEEccCcccccccc-cccccCCCccEEeccCc-cccccCCCCCCCCCCCCeeeecccc
Q 039344 267 LLGHNQFRGPIPI-LRNLTSLERVRLDRNYLTGNIS-ESFYIYPNLTYIDLSQN-NFYGEISSDWGRCPKLSTLDFSINN 343 (873)
Q Consensus 267 ~L~~N~l~~~~~~-l~~l~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~l~~N~ 343 (873)
++++|++++.++. +..+++|++|++++|.+++++. ..|..+++|++|++++| .+.+..+..|..+++|+.|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 6666666653332 4555555555555555554444 34445555555555555 2443344444445555555555555
Q ss_pred CCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCcccccccccccccccccccccccccCCC
Q 039344 344 ITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKS 423 (873)
Q Consensus 344 i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 423 (873)
+++..|..+ ..+++|++|++++|+++......+..+++|+.|+|++|++++..+..
T Consensus 186 l~~~~~~~l------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 241 (353)
T 2z80_A 186 LQSYEPKSL------------------------KSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE 241 (353)
T ss_dssp CCEECTTTT------------------------TTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-
T ss_pred cCccCHHHH------------------------hccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccc
Confidence 544444444 44444555555555444322222333455555555555555433332
Q ss_pred cCchh-hhhhhcccccCCccCc----ccchhhhhhcccceecccCccccCCCchhhhccCCCcEEecCCCcccccCCC
Q 039344 424 LGNLE-LIHLSELDLSRNFLRE----AIPSQICIMQSLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELRGSIPN 496 (873)
Q Consensus 424 ~~~l~-~~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~~~~p~ 496 (873)
+.... ...++.++|++|.+++ .+|..+..+++|+.|+|++|+++.+++..|..+++|++|+|++|++.+..|.
T Consensus 242 l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 242 LSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp -----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 22111 1134445555555544 4677888999999999999999976666679999999999999999987764
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=5.2e-33 Score=326.98 Aligned_cols=402 Identities=17% Similarity=0.114 Sum_probs=176.8
Q ss_pred CCccccCCCCCCEEECCCCccc---ccCCcccc------------CCCCCceEEccCCcccccCCCCccCC--CCCCEEE
Q 039344 13 IPSELRNLKSLSDLELGNNKLS---GSIPHSLG------------NLTNLATLYIHTNSLSGSIPGEIGNF--RFFSDLE 75 (873)
Q Consensus 13 ~p~~~~~l~~l~~L~L~~n~l~---~~~p~~~~------------~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~ 75 (873)
++..+..+++|++|+|+++.-. +.+|..+. .+++|++|+|++|.+++..+..+... .+|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 3344455666666666654321 22222222 45566666666665554444444332 2266666
Q ss_pred cccCC-CCC-CCCcccccccccceeeccccccCCC----CCccccCCcccCccccccccccc----ccCccccCCCCCcE
Q 039344 76 LSNNK-LSG-SIPPSLGNLSNLATLYLDTNSLSNS----IPSELGNLRSLSNLQLNNNILSG----SIPHSLGNLTNLAT 145 (873)
Q Consensus 76 L~~n~-l~~-~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~ 145 (873)
|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+..+++|++
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 65554 110 0111122455566666665555433 22233445555555555555541 22233344555555
Q ss_pred EEccCCCCccccccccCCCCCCCEEEccCCcCc---cCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccC
Q 039344 146 LYIYSNSLSASILGKIGNLKSLSNLQLSENNFN---GSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGY 222 (873)
Q Consensus 146 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 222 (873)
|++++|.+.++ +..+..+++|++|+++..... ...+..+..+++|+.|+++++... ..|..+..+++|++|+|++
T Consensus 225 L~L~~~~~~~l-~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~ 302 (592)
T 3ogk_B 225 VKVGDFEILEL-VGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLY 302 (592)
T ss_dssp EECSSCBGGGG-HHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETT
T ss_pred EeccCccHHHH-HHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCC
Confidence 55555555442 344555555555555532221 112233444555555555554332 3444445555555555555
Q ss_pred cccCCCcc-cccCCCCCccEEecccccCC-CCCchhhcCCCCCcEEEccC-----------CcCcC--cCCcCCCCCCCC
Q 039344 223 NKLSGSIP-ISMGNLSNLTYLNLFENSLS-GAIPYEYRNLVKLTILLLGH-----------NQFRG--PIPILRNLTSLE 287 (873)
Q Consensus 223 N~l~~~~~-~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~-----------N~l~~--~~~~l~~l~~L~ 287 (873)
|.+++... ..+..+++|++|+++ +.+. ...+..+..+++|++|++++ |.++. .......+++|+
T Consensus 303 ~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 381 (592)
T 3ogk_B 303 ALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELE 381 (592)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCS
T ss_pred CcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCe
Confidence 55432211 123445555555555 2222 11222233445555555552 33332 111123345555
Q ss_pred eEEccCccccccccccccc-CCCccEEecc----Ccccccc-----CCCCCCCCCCCCeeeecccc--CCccCCcccc-C
Q 039344 288 RVRLDRNYLTGNISESFYI-YPNLTYIDLS----QNNFYGE-----ISSDWGRCPKLSTLDFSINN--ITGNVPPEIG-H 354 (873)
Q Consensus 288 ~L~L~~n~l~~~~~~~~~~-~~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~l~~N~--i~~~~~~~~~-~ 354 (873)
+|+++.|.+++.....+.. +++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++..+..++ .
T Consensus 382 ~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~ 461 (592)
T 3ogk_B 382 YMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQY 461 (592)
T ss_dssp EEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHS
T ss_pred EEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHh
Confidence 5555555554433333332 4455555553 3334321 11113334455555554322 3333222222 2
Q ss_pred CCCCCEEeccCCccCCC-CCccccccccccEEEecCccccCCc-ccccccccccccccccccccc
Q 039344 355 SSQLGVLDLSSNHIVGE-IPIELGKLNFFIKLVLAHNQLSGQL-SPKLGSLVQLEHLDLSSNRLS 417 (873)
Q Consensus 355 ~~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~ 417 (873)
+++|++|+|++|.+++. ++..+..+++|++|++++|.+++.. +.....+++|+.|+|++|+++
T Consensus 462 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp CTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 44455555555554431 1222334445555555555544321 122233444555555555544
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=9.9e-30 Score=272.28 Aligned_cols=280 Identities=22% Similarity=0.244 Sum_probs=134.7
Q ss_pred CEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCc--ccccCCCCCccEEecc
Q 039344 168 SNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSI--PISMGNLSNLTYLNLF 245 (873)
Q Consensus 168 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~ 245 (873)
+.++.+++.++ .+|..+. ++|++|++++|.++...+..|.++++|++|+|++|+++... +..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 34555555555 2333222 35555555555555333334555555555555555554221 2333344555555555
Q ss_pred cccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccc-cccccCCCccEEeccCccccccC
Q 039344 246 ENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNIS-ESFYIYPNLTYIDLSQNNFYGEI 324 (873)
Q Consensus 246 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~ 324 (873)
+|.++. .+..+..+++|++|++++|++.+ +.. ..+..+++|++|++++|.+.+..
T Consensus 87 ~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~-----------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 87 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQ-----------------------MSEFSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp SCSEEE-EEEEEETCTTCCEEECTTSEEES-----------------------STTTTTTTTCTTCCEEECTTSCCEECS
T ss_pred CCcccc-ChhhcCCCCCCCEEECCCCcccc-----------------------cccchhhhhccCCCEEECCCCcCCccc
Confidence 555542 33334444555555555554444 332 33444444444444444444444
Q ss_pred CCCCCCCCCCCeeeeccccCCc-cCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCcccccccc
Q 039344 325 SSDWGRCPKLSTLDFSINNITG-NVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSL 403 (873)
Q Consensus 325 ~~~~~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 403 (873)
+..+..+++|+.|++++|.+++ ..|..++.+++|++|+|++|.+++..|..+..+++|++|++++|++++..+..+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 4444444555555555554443 344444445555555555555544444444455555555555555544444445555
Q ss_pred cccccccccccccccccCCCcCchhhhhhhcccccCCccCccc--chhhhhhcccceecccCccccCCCchhhh
Q 039344 404 VQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAI--PSQICIMQSLEKLNLSHNSLSGLIPSCFE 475 (873)
Q Consensus 404 ~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 475 (873)
++|+.|||++|++.+..|..+..+. .+|++|+|++|++++.. ......+...+.+....+.+....|..+.
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~-~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFP-SSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCC-TTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred ccCCEeECCCCCCcccCHHHHHhhh-ccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 5555555555555555555444431 14555555555554321 11123344455555555555555555544
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.7e-30 Score=273.62 Aligned_cols=247 Identities=23% Similarity=0.284 Sum_probs=137.8
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCC--CCcccccccccceeecc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGS--IPPSLGNLSNLATLYLD 101 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~ 101 (873)
+.++.++++++ .+|..+. ++|++|+|++|+++...++.|.++++|++|+|++|.++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 45666666665 4454333 4666666666666644444456666666666666666522 14445556666666666
Q ss_pred ccccCCCCCccccCCcccCcccccccccccccC-ccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCcc-
Q 039344 102 TNSLSNSIPSELGNLRSLSNLQLNNNILSGSIP-HSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNG- 179 (873)
Q Consensus 102 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~- 179 (873)
+|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+....+..|..+++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 66665 345555566666666666666654332 345555666666666666555555555555566666666665554
Q ss_pred CCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcC
Q 039344 180 SIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRN 259 (873)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 259 (873)
..|..+..+++|++|++++|.+++..|..|..+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 34555555555555555555555544555555555555555555555444444555555555555555555555544444
Q ss_pred CC-CCcEEEccCCcCc
Q 039344 260 LV-KLTILLLGHNQFR 274 (873)
Q Consensus 260 l~-~L~~L~L~~N~l~ 274 (873)
++ +|++|++++|++.
T Consensus 246 ~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCTTCCEEECTTCCEE
T ss_pred hhccCCEEEccCCCee
Confidence 42 4555555555444
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.2e-30 Score=283.18 Aligned_cols=279 Identities=20% Similarity=0.208 Sum_probs=127.0
Q ss_pred CCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccc
Q 039344 45 TNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQL 124 (873)
Q Consensus 45 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (873)
+.....++++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|++++..|..|.++++|++|++
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 33333444444444 3333332 24444444444444333334444444444444444444433444444444444444
Q ss_pred cccccccccCccccCCCCCcEEEccCCCCccccc-cccCCCCCCCEEEccCC-cCccCCCccccCCCCCcEEeccCCCCc
Q 039344 125 NNNILSGSIPHSLGNLTNLATLYIYSNSLSASIL-GKIGNLKSLSNLQLSEN-NFNGSIPPSLGNLSNLATLYLDTNSLS 202 (873)
Q Consensus 125 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~i~~~~~~~~~~l~~L~~L~L~~n~l~ 202 (873)
++|.+++..+..|..+++|++|++++|+++.+.. ..|..+++|++|++++| .++...+..|.++++|++|++++|.++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 4444443222234444444444444444443333 33444444444444444 233333444444444444444444444
Q ss_pred ccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCC
Q 039344 203 YSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRN 282 (873)
Q Consensus 203 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~ 282 (873)
+..|..+..+++|++|++++|+++...+..+..+++|++|++++|.+++..+..+. ....
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~--------------------~~~~ 247 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS--------------------TGET 247 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--------------------------C
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc--------------------cccc
Confidence 44444444444444444444444422222222344444444444444433222111 1112
Q ss_pred CCCCCeEEccCcccccc----cccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCc
Q 039344 283 LTSLERVRLDRNYLTGN----ISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITG 346 (873)
Q Consensus 283 l~~L~~L~L~~n~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~ 346 (873)
.+.++.++++++.+++. .+..+..+++|++|++++|+++...+..|..+++|+.|++++|.+.+
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 23344444444444431 23445566677777777777764433445667777777777777664
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.3e-28 Score=278.67 Aligned_cols=247 Identities=23% Similarity=0.258 Sum_probs=145.8
Q ss_pred CceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 47 LATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
...++.+++.++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 345555555555 4444443 4556666666666555555566666666666666666555555556666666666666
Q ss_pred cccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccC-CcCccCCCccccCCCCCcEEeccCCCCcccC
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSE-NNFNGSIPPSLGNLSNLATLYLDTNSLSYSI 205 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 205 (873)
|.++...+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|.+++ .
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c
Confidence 666544444555566666666666666555555566666666666665 33443334455566666666666666653 2
Q ss_pred CccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCC-cCCCCC
Q 039344 206 PSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIP-ILRNLT 284 (873)
Q Consensus 206 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~ 284 (873)
| .+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+++..++ .+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 2 35556666666666666665556666666666666666666666666666666666666666666665333 455666
Q ss_pred CCCeEEccCccccc
Q 039344 285 SLERVRLDRNYLTG 298 (873)
Q Consensus 285 ~L~~L~L~~n~l~~ 298 (873)
+|+.|+|++|.+..
T Consensus 291 ~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 291 YLVELHLHHNPWNC 304 (452)
T ss_dssp TCCEEECCSSCEEC
T ss_pred CCCEEEccCCCcCC
Confidence 66667776666653
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.7e-28 Score=276.67 Aligned_cols=246 Identities=25% Similarity=0.278 Sum_probs=145.0
Q ss_pred CceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 47 LATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
...++.+++.++ .+|..+. ++++.|+|++|+++...+..|.++++|++|+|++|+++.+.+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 445555555555 4454443 4555666666666555555566666666666666666555555556666666666666
Q ss_pred cccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCC-cCccCCCccccCCCCCcEEeccCCCCcccC
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSEN-NFNGSIPPSLGNLSNLATLYLDTNSLSYSI 205 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 205 (873)
|+++...+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++| .+....+..|.++++|++|+|++|.++ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 6665444445566666666666666665555555666666666666653 333333445556666666666666665 23
Q ss_pred CccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCC-cCCCCC
Q 039344 206 PSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIP-ILRNLT 284 (873)
Q Consensus 206 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~ 284 (873)
| .+..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+++..++ .+..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 3 35556666666666666665556666666666666666666666666666666666666666666665333 455666
Q ss_pred CCCeEEccCcccc
Q 039344 285 SLERVRLDRNYLT 297 (873)
Q Consensus 285 ~L~~L~L~~n~l~ 297 (873)
+|+.|+|++|.+.
T Consensus 280 ~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 280 HLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEcCCCCcc
Confidence 6666666666665
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.9e-29 Score=265.63 Aligned_cols=224 Identities=25% Similarity=0.291 Sum_probs=116.1
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTN 103 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (873)
+.++.++++++ .+|..+ .++|++|+|++|.+++..++.|..+++|++|+|++|.+++..|.+|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45555555555 344333 245555666665555544455555555555555555555444555555555555555555
Q ss_pred c-cCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCC
Q 039344 104 S-LSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIP 182 (873)
Q Consensus 104 ~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 182 (873)
+ ++...|..|..+++|++|++++|.++ .+.+..|..+++|++|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQ------------------------ELGPGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCC------------------------EECHhHhhCCcCCCEEECCCCcccccCH
Confidence 4 44333444444444444444444444 4444444444444444444444444334
Q ss_pred ccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCC
Q 039344 183 PSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVK 262 (873)
Q Consensus 183 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 262 (873)
..|..+++|++|++++|.++...+..|..+++|++|++++|++++..|..+..+++|++|++++|++++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 44444555555555555554433444555555555555555555444555555555555555555555544455555555
Q ss_pred CcEEEccCCcCc
Q 039344 263 LTILLLGHNQFR 274 (873)
Q Consensus 263 L~~L~L~~N~l~ 274 (873)
|+.|++++|++.
T Consensus 227 L~~L~l~~N~~~ 238 (285)
T 1ozn_A 227 LQYLRLNDNPWV 238 (285)
T ss_dssp CCEEECCSSCEE
T ss_pred cCEEeccCCCcc
Confidence 555555555554
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.4e-28 Score=276.48 Aligned_cols=250 Identities=23% Similarity=0.233 Sum_probs=223.9
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecc
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLD 101 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (873)
....++.++++++ .+|..+. ++|++|+|++|+++++.|..|.++++|++|+|++|.++++.+.+|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3568899999998 6776655 789999999999998889999999999999999999998888999999999999999
Q ss_pred ccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccC-CCCccccccccCCCCCCCEEEccCCcCccC
Q 039344 102 TNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYS-NSLSASILGKIGNLKSLSNLQLSENNFNGS 180 (873)
Q Consensus 102 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 180 (873)
+|+++...+..|.++++|++|+|++|.++...+..|..+++|++|++++ |.+..+....|.++++|++|+|++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 9999977777799999999999999999977777899999999999998 677777777899999999999999999854
Q ss_pred CCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCC
Q 039344 181 IPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNL 260 (873)
Q Consensus 181 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 260 (873)
| .+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 3 58889999999999999998889999999999999999999998888899999999999999999998888889999
Q ss_pred CCCcEEEccCCcCcCc
Q 039344 261 VKLTILLLGHNQFRGP 276 (873)
Q Consensus 261 ~~L~~L~L~~N~l~~~ 276 (873)
++|+.|+|++|.+.-.
T Consensus 290 ~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCD 305 (452)
T ss_dssp TTCCEEECCSSCEECS
T ss_pred cCCCEEEccCCCcCCC
Confidence 9999999999988653
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=275.16 Aligned_cols=249 Identities=25% Similarity=0.258 Sum_probs=223.1
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecc
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLD 101 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (873)
..+.++.++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.++.+.+.+|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4578899999998 6777665 789999999999998888999999999999999999998888899999999999999
Q ss_pred ccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccC-CCCccccccccCCCCCCCEEEccCCcCccC
Q 039344 102 TNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYS-NSLSASILGKIGNLKSLSNLQLSENNFNGS 180 (873)
Q Consensus 102 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 180 (873)
+|+++...+..|.++++|++|+|++|.++...+..|..+++|++|+|++ |.+..+....|.++++|++|+|++|+++..
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 200 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI 200 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc
Confidence 9999977777899999999999999999977777899999999999998 567777777899999999999999999844
Q ss_pred CCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCC
Q 039344 181 IPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNL 260 (873)
Q Consensus 181 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 260 (873)
| .+..+++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++...+..|..+
T Consensus 201 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 201 -P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp -C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred -c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 4 48889999999999999998889999999999999999999998888899999999999999999998888889999
Q ss_pred CCCcEEEccCCcCcC
Q 039344 261 VKLTILLLGHNQFRG 275 (873)
Q Consensus 261 ~~L~~L~L~~N~l~~ 275 (873)
++|+.|+|++|.+.-
T Consensus 279 ~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 279 HHLERIHLHHNPWNC 293 (440)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred cCCCEEEcCCCCccC
Confidence 999999999999864
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.8e-28 Score=258.01 Aligned_cols=268 Identities=22% Similarity=0.215 Sum_probs=145.2
Q ss_pred cEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 039344 144 ATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYN 223 (873)
Q Consensus 144 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 223 (873)
++++++++.++.++.. ..++|++|+|++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~~ip~~---~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG---IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSCCTT---CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccCCcC---CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 5666777666654332 2356777777777776666666666777777777777776655666666667777777766
Q ss_pred c-cCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCC-cCCCCCCCCeEEccCcccccccc
Q 039344 224 K-LSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIP-ILRNLTSLERVRLDRNYLTGNIS 301 (873)
Q Consensus 224 ~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~l~~l~~L~~L~L~~n~l~~~~~ 301 (873)
+ ++...+..+..+++|++|++++|.+++..+..|..+++|++|++++|++....+ .+..+++|++|++++|.+++++.
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 655555666666666666666666665555556666666666666665554332 24444444444444444444443
Q ss_pred cccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCcccccccc
Q 039344 302 ESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNF 381 (873)
Q Consensus 302 ~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~ 381 (873)
.. |..+++|+.|++++|++++..|..++.+++|+.|+|++|.+++..+..+..+++
T Consensus 171 ~~------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 171 RA------------------------FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TT------------------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred HH------------------------hcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 33 444444444444444444444444444444444444444444333333444444
Q ss_pred ccEEEecCccccCCcccccccccccccccccccccccccCCCcCchhhhhhhcccccC
Q 039344 382 FIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSR 439 (873)
Q Consensus 382 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~ 439 (873)
|+.|++++|.+....+. ......++.+..+.|.+....|..+.+..+..++..++++
T Consensus 227 L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~ 283 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQG 283 (285)
T ss_dssp CCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCC
T ss_pred cCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHhCCcChhhcCHHHhcc
Confidence 44444444444432111 0112334555566666666666665554433444444443
No 311
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.5e-28 Score=263.10 Aligned_cols=235 Identities=21% Similarity=0.298 Sum_probs=138.5
Q ss_pred CCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceee
Q 039344 20 LKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLY 99 (873)
Q Consensus 20 l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (873)
.+.++.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..++.+++|++|+|++|.++ .+|..|.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356777777777776 56666777777777777777777 66777777777777777777777 5666777777777777
Q ss_pred ccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCcc
Q 039344 100 LDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNG 179 (873)
Q Consensus 100 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 179 (873)
|++|++.+.+|..+... ..+..|.++++|++|+|++|+++. .+..+..+++|++|+|++|++++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~~-lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCCC-CCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcCc-chHhhcCCCCCCEEEccCCCCCc
Confidence 77766666666655430 001112334555555555555542 23334455555555555555552
Q ss_pred CCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcC
Q 039344 180 SIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRN 259 (873)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 259 (873)
+|..+..+++|++|++++|.+.+..|..+..+++|++|+|++|.+.+..|..+..+++|++|+|++|.+.+.+|..+.+
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 3334555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCCCcEEEccCCcCc
Q 039344 260 LVKLTILLLGHNQFR 274 (873)
Q Consensus 260 l~~L~~L~L~~N~l~ 274 (873)
+++|+.+++..+.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 566666655555443
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=9.9e-28 Score=258.45 Aligned_cols=237 Identities=20% Similarity=0.265 Sum_probs=198.6
Q ss_pred CCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccc
Q 039344 44 LTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQ 123 (873)
Q Consensus 44 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (873)
.+++++|+|++|+++ .+|..+..+++|++|+|++|.++ .+|..|.++++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467788888888887 66777777888888888888887 67777788888888888888877 6677777788888888
Q ss_pred ccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcc
Q 039344 124 LNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSY 203 (873)
Q Consensus 124 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 203 (873)
|++|++.+.+|..+... ...+.|.++++|++|+|++|+++ .+|..+..+++|++|+|++|.+++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 88777766677655431 11234677999999999999999 788889999999999999999994
Q ss_pred cCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCc-CCcCCC
Q 039344 204 SIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP-IPILRN 282 (873)
Q Consensus 204 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~l~~ 282 (873)
+|..+..+++|++|+|++|.+.+..|..+..+++|++|+|++|.+.+..|..+..+++|+.|++++|++.+. +..+..
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 666799999999999999999999999999999999999999999999999999999999999999998884 457999
Q ss_pred CCCCCeEEccCccccccc
Q 039344 283 LTSLERVRLDRNYLTGNI 300 (873)
Q Consensus 283 l~~L~~L~L~~n~l~~~~ 300 (873)
+++|+.+++..+.+....
T Consensus 300 L~~L~~l~l~~~~~~~l~ 317 (328)
T 4fcg_A 300 LPANCIILVPPHLQAQLD 317 (328)
T ss_dssp SCTTCEEECCGGGSCC--
T ss_pred ccCceEEeCCHHHHHHHh
Confidence 999999999988776543
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.2e-29 Score=268.67 Aligned_cols=251 Identities=20% Similarity=0.187 Sum_probs=125.0
Q ss_pred cCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCccc-ccCCCCcc-------CCCCCCEEEcccCCCCCCCCccc
Q 039344 18 RNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLS-GSIPGEIG-------NFRFFSDLELSNNKLSGSIPPSL 89 (873)
Q Consensus 18 ~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~~-------~l~~L~~L~L~~n~l~~~~~~~~ 89 (873)
+..++|++|++++|.+ .+|..+... |++|+|++|+++ ..+|..+. ++++|++|+|++|++++..|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 4445566666666666 455544433 666666666663 23444443 45666666666666665555554
Q ss_pred --ccccccceeeccccccCCCCCccccCC-----cccCcccccccccccccCccccCCCCCcEEEccCCCCccc--cccc
Q 039344 90 --GNLSNLATLYLDTNSLSNSIPSELGNL-----RSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSAS--ILGK 160 (873)
Q Consensus 90 --~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~ 160 (873)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|.+++..+..|+.+++|++|++++|++.+. .+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5566666666666666544 5555544 5555555555555544445555555555555555554332 1111
Q ss_pred --cCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcc-cccCCCC
Q 039344 161 --IGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIP-ISMGNLS 237 (873)
Q Consensus 161 --~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 237 (873)
+..+++|++|+|++|++++.. ......+..+++|++|++++|++++..| ..+..++
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~---------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPS---------------------GVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHH---------------------HHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred HHhccCCCCCEEECCCCcCcchH---------------------HHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 244555555555555554210 1111222344444444444444443332 2233344
Q ss_pred CccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCccccc
Q 039344 238 NLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTG 298 (873)
Q Consensus 238 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~ 298 (873)
+|++|+|++|+++ .+|..+. ++|++|++++|++++.+ .+..+++|++|++++|.+++
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p-~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNP-SPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCC-CTTTSCEEEEEECTTCTTTC
T ss_pred CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCCh-hHhhCCCCCEEeccCCCCCC
Confidence 5555555555554 2333332 45555555555555442 25555555555555555543
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=7.2e-27 Score=270.56 Aligned_cols=87 Identities=24% Similarity=0.215 Sum_probs=44.3
Q ss_pred CCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEe
Q 039344 308 PNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVL 387 (873)
Q Consensus 308 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 387 (873)
++|++|+|++|.+++ +| ..+++|+.|++++|+|+. +|. .+++|+.|+|++|.|+ .+|..+..+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 334444444444442 22 223455555555555552 333 3455666666666665 45555666666666666
Q ss_pred cCccccCCcccccccc
Q 039344 388 AHNQLSGQLSPKLGSL 403 (873)
Q Consensus 388 ~~N~l~~~~~~~~~~l 403 (873)
++|.+++..|..+..+
T Consensus 292 ~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 292 EGNPLSERTLQALREI 307 (622)
T ss_dssp CSCCCCHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhc
Confidence 6666665555444433
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3e-29 Score=269.55 Aligned_cols=257 Identities=21% Similarity=0.188 Sum_probs=141.3
Q ss_pred cceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccC
Q 039344 95 LATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSE 174 (873)
Q Consensus 95 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (873)
++.++++.+.+.......+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+ |..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3344555555543333444555566666666666665555566666666666666666654433 66666666666666
Q ss_pred CcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCc
Q 039344 175 NNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIP 254 (873)
Q Consensus 175 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 254 (873)
|++++.. ..++|++|++++|.+++..+. .+++|++|++++|++++..+..+..+++|++|++++|.+++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 6665322 225666666666666644332 24566777777777766556666667777777777777766555
Q ss_pred hhhc-CCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCC
Q 039344 255 YEYR-NLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPK 333 (873)
Q Consensus 255 ~~~~-~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 333 (873)
..+. .+++|++|++++|+++.... ...+++|++|++++|.++++++. +..+++|++|+|++|+++ .+|..+..+++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~ 238 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQN 238 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTT
T ss_pred HHHhhccCcCCEEECCCCcCccccc-ccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCCC
Confidence 5543 56666666666666655422 22355555555555555544333 444455555555555544 23333444444
Q ss_pred CCeeeeccccCC-ccCCccccCCCCCCEEecc
Q 039344 334 LSTLDFSINNIT-GNVPPEIGHSSQLGVLDLS 364 (873)
Q Consensus 334 L~~L~l~~N~i~-~~~~~~~~~~~~L~~L~Ls 364 (873)
|+.|++++|.+. +..|..++.+++|+.|+++
T Consensus 239 L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 444444444444 3333333444444444443
No 316
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.7e-29 Score=290.93 Aligned_cols=187 Identities=19% Similarity=0.125 Sum_probs=133.1
Q ss_pred eeecCCeEEEEEE-eCCCcEEEEEEccCCCCCc-------chhHHHHHHHHHHHHhc-cCCceeeEEeEEEecceeEEEE
Q 039344 610 IGKGGQGSVYMSK-LASGEIIAVKKFHSPLPGE-------MTFQQEFLNEVKALTEI-WHRNIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 610 lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 680 (873)
.+.|+.|.+..++ .-.|+.+|+|.+....... ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666553 3358999999997542211 12346799999999999 7999999999999999999999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCC
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPD 760 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 760 (873)
||++|++|.+.+.... +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999996543 35543 5889999999999999 9999999999999999999999999999987766
Q ss_pred CCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 039344 761 SSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806 (873)
Q Consensus 761 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P 806 (873)
.....+.+||+.|||||++.+. +..++|+||+|++.+++.++..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 6666778899999999998764 67789999999998887665544
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.7e-29 Score=267.97 Aligned_cols=256 Identities=23% Similarity=0.225 Sum_probs=156.4
Q ss_pred EEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccccccc
Q 039344 50 LYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNIL 129 (873)
Q Consensus 50 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 129 (873)
++++++.+....+..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ +..+++|++|++++|.+
T Consensus 15 ~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 15 EKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp ESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 3444444443333333444455555555555554444455555555555555555543322 55555566666666555
Q ss_pred ccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccc
Q 039344 130 SGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSEL 209 (873)
Q Consensus 130 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 209 (873)
++. + ..++|++|++++|+++++.+.. +++|++|++++|++++..+..+..+++|++|++++|.+++..+..+
T Consensus 93 ~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 93 QEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp EEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred ccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 521 1 2256666666666666554433 4566777777777766656666667777777777777775555555
Q ss_pred -cCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCe
Q 039344 210 -GNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLER 288 (873)
Q Consensus 210 -~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~ 288 (873)
..+++|++|+|++|+|++. + ....+++|++|+|++|++++..+ .+..+++|+.|++++|+++..+..+..+++|+.
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEH 241 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCE
T ss_pred hhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccchhhHhhcCCCCCE
Confidence 3567777777777777643 2 22346777777777777775433 477777777777777777766666777777777
Q ss_pred EEccCcccc-cccccccccCCCccEEeccCc
Q 039344 289 VRLDRNYLT-GNISESFYIYPNLTYIDLSQN 318 (873)
Q Consensus 289 L~L~~n~l~-~~~~~~~~~~~~L~~L~Ls~N 318 (873)
|++++|.++ +..+..+..+++|+.|+++++
T Consensus 242 L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp EECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred EEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 777777777 455556666777777777733
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1e-26 Score=269.33 Aligned_cols=127 Identities=23% Similarity=0.269 Sum_probs=86.2
Q ss_pred CCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEec
Q 039344 284 TSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDL 363 (873)
Q Consensus 284 ~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~L 363 (873)
++|+.|++++|.+++++. .+++|+.|++++|.++. +|. .+++|+.|++++|+|++ +| ..+++|+.|+|
T Consensus 181 ~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~L 248 (622)
T 3g06_A 181 SGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMV 248 (622)
T ss_dssp TTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEEC
Confidence 444444444444443322 12556666666666653 332 24678888888888875 44 45578888888
Q ss_pred cCCccCCCCCccccccccccEEEecCccccCCcccccccccccccccccccccccccCCCcCch
Q 039344 364 SSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSSNRLSNSIPKSLGNL 427 (873)
Q Consensus 364 s~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 427 (873)
++|.|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++..|..+..+
T Consensus 249 s~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 249 SGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp CSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 888887 4555 5677888888888888 567778888888888888888887766655543
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.6e-28 Score=263.10 Aligned_cols=204 Identities=18% Similarity=0.171 Sum_probs=103.7
Q ss_pred cccccccceeeccccccCCCCCccccCCcccCcccccccccc-cccCcccc-------CCCCCcEEEccCCCCccccccc
Q 039344 89 LGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILS-GSIPHSLG-------NLTNLATLYIYSNSLSASILGK 160 (873)
Q Consensus 89 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~ 160 (873)
++..++|+.|++++|.+ .+|..+... |+.|+|++|.++ ..+|..+. .+++|++|+|++|++++..+..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34455566666666665 345444432 566666666653 23333333 4555555555555555444443
Q ss_pred c--CCCCCCCEEEccCCcCccCCCccccCC-----CCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCC--ccc
Q 039344 161 I--GNLKSLSNLQLSENNFNGSIPPSLGNL-----SNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGS--IPI 231 (873)
Q Consensus 161 ~--~~l~~L~~L~L~~n~i~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~ 231 (873)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|.+++..+..|+.+++|++|++++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 3 5555555555555555544 4444444 5555555555555554445555555555555555554432 111
Q ss_pred c--cCCCCCccEEecccccCCCC---CchhhcCCCCCcEEEccCCcCcCcC--CcCCCCCCCCeEEccCcccc
Q 039344 232 S--MGNLSNLTYLNLFENSLSGA---IPYEYRNLVKLTILLLGHNQFRGPI--PILRNLTSLERVRLDRNYLT 297 (873)
Q Consensus 232 ~--~~~l~~L~~L~L~~n~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~--~~l~~l~~L~~L~L~~n~l~ 297 (873)
. +..+++|++|++++|++++. ....+..+++|++|++++|++.+.. +.+..+++|++|+|++|.|+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 2 24555566666666655521 1122345555555555555555532 23333444444444444444
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=7.9e-31 Score=308.55 Aligned_cols=442 Identities=15% Similarity=0.131 Sum_probs=193.7
Q ss_pred EEECCCCcccccCCccccCCCCCceEEccCCcccc---cCCCC------------ccCCCCCCEEEcccCCCCCCCCccc
Q 039344 25 DLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSG---SIPGE------------IGNFRFFSDLELSNNKLSGSIPPSL 89 (873)
Q Consensus 25 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~---~~p~~------------~~~l~~L~~L~L~~n~l~~~~~~~~ 89 (873)
.+++.++... ..+..+..+++|++|++++|.... ..|.. +..+++|++|+|++|.+++..+..+
T Consensus 47 ~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l 125 (594)
T 2p1m_B 47 KVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELI 125 (594)
T ss_dssp EEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH
T ss_pred EEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHH
Confidence 4455444332 222345556666677666654221 11111 1234556666666665554444444
Q ss_pred c-cccccceeecccc-ccCCC-CCccccCCcccCcccccccccccccCcccc----CCCCCcEEEccCCC--Ccccc-cc
Q 039344 90 G-NLSNLATLYLDTN-SLSNS-IPSELGNLRSLSNLQLNNNILSGSIPHSLG----NLTNLATLYIYSNS--LSASI-LG 159 (873)
Q Consensus 90 ~-~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~n~--l~~~~-~~ 159 (873)
. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. +.... ..
T Consensus 126 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~ 205 (594)
T 2p1m_B 126 AKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALER 205 (594)
T ss_dssp HHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHH
T ss_pred HHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHH
Confidence 3 4556666666555 33321 223333555666666666555443332222 34456666665554 21100 11
Q ss_pred ccCCCCCCCEEEccCC-cCccCCCccccCCCCCcEEeccCCC-------CcccCCccccCCCCCCEE-EccCcccCCCcc
Q 039344 160 KIGNLKSLSNLQLSEN-NFNGSIPPSLGNLSNLATLYLDTNS-------LSYSIPSELGNLRSLSNL-SLGYNKLSGSIP 230 (873)
Q Consensus 160 ~~~~l~~L~~L~L~~n-~i~~~~~~~~~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L-~L~~N~l~~~~~ 230 (873)
.+..+++|++|+|++| .+.+ ++..+..+++|++|+++.+. +.+ .+..+.++++|+.| .+.+.... ..+
T Consensus 206 l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l~ 282 (594)
T 2p1m_B 206 LVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YLP 282 (594)
T ss_dssp HHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GGG
T ss_pred HHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccchh-hHH
Confidence 1123455555555555 2222 34444455555555543332 221 22234455555555 22222111 122
Q ss_pred cccCCCCCccEEecccccCCCCCc-hhhcCCCCCcEEEccCCcCcC-cCC-cCCCCCCCCeEEccCcccccccccccccC
Q 039344 231 ISMGNLSNLTYLNLFENSLSGAIP-YEYRNLVKLTILLLGHNQFRG-PIP-ILRNLTSLERVRLDRNYLTGNISESFYIY 307 (873)
Q Consensus 231 ~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~-~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~~ 307 (873)
..+..+++|++|++++|.+++... ..+..+++|+.|++++| +.. ... ....+++|++|+++++.-.+
T Consensus 283 ~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g--------- 352 (594)
T 2p1m_B 283 AVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFV--------- 352 (594)
T ss_dssp GGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTC---------
T ss_pred HHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccc---------
Confidence 222234455555555554432111 11234444444444444 211 111 11123444444442210000
Q ss_pred CCccEEeccCccccccCCCCCC-CCCCCCeeeeccccCCccCCcccc-CCCCCCEEecc--C----CccCCCC-----Cc
Q 039344 308 PNLTYIDLSQNNFYGEISSDWG-RCPKLSTLDFSINNITGNVPPEIG-HSSQLGVLDLS--S----NHIVGEI-----PI 374 (873)
Q Consensus 308 ~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~l~~N~i~~~~~~~~~-~~~~L~~L~Ls--~----N~i~~~~-----~~ 374 (873)
..+.+.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+|+ + |.+++.. +.
T Consensus 353 ------~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~ 426 (594)
T 2p1m_B 353 ------MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGA 426 (594)
T ss_dssp ------SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHH
T ss_pred ------cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHH
Confidence 0011222221111111 244555555555555443333332 34555555555 2 3333111 11
Q ss_pred cccccccccEEEecCccccCCccccccc-ccccccccccccccccccCCCc-CchhhhhhhcccccCCccCcccch-hhh
Q 039344 375 ELGKLNFFIKLVLAHNQLSGQLSPKLGS-LVQLEHLDLSSNRLSNSIPKSL-GNLELIHLSELDLSRNFLREAIPS-QIC 451 (873)
Q Consensus 375 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~~~L~~L~Ls~N~l~~~~~~-~~~ 451 (873)
.+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ .. .++|++|+|++|.+++.... .+.
T Consensus 427 l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~--~~~L~~L~L~~n~~~~~~~~~~~~ 503 (594)
T 2p1m_B 427 IVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSG--CDSLRKLEIRDCPFGDKALLANAS 503 (594)
T ss_dssp HHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHH--CTTCCEEEEESCSCCHHHHHHTGG
T ss_pred HHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhc--CCCcCEEECcCCCCcHHHHHHHHH
Confidence 133445566666654 444433333333 5566666666666654333322 22 23566666666666544333 233
Q ss_pred hhcccceecccCccccCCCchhh-hccCCCcEEecCCCc
Q 039344 452 IMQSLEKLNLSHNSLSGLIPSCF-EKMNGLLHIDISYNE 489 (873)
Q Consensus 452 ~l~~L~~L~L~~N~l~~~~~~~~-~~~~~L~~l~ls~N~ 489 (873)
.+++|+.|++++|+++......+ ..+++|+...+..+.
T Consensus 504 ~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 504 KLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp GGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred hCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 46777777777777754333334 456777666665553
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.9e-30 Score=301.77 Aligned_cols=372 Identities=13% Similarity=0.113 Sum_probs=217.3
Q ss_pred CCcccCcccccccccccccCcccc-CCCCCcEEEccCC-CCccc-cccccCCCCCCCEEEccCCcCccCCCcccc----C
Q 039344 115 NLRSLSNLQLNNNILSGSIPHSLG-NLTNLATLYIYSN-SLSAS-ILGKIGNLKSLSNLQLSENNFNGSIPPSLG----N 187 (873)
Q Consensus 115 ~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~----~ 187 (873)
.+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. .+..+..+++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 344555555555554443333333 3455555555555 33221 111222455555555555554433322222 3
Q ss_pred CCCCcEEeccCCC--Ccc-cCCccccCCCCCCEEEccCc-ccCCCcccccCCCCCccEEecccc-------cCCCCCchh
Q 039344 188 LSNLATLYLDTNS--LSY-SIPSELGNLRSLSNLSLGYN-KLSGSIPISMGNLSNLTYLNLFEN-------SLSGAIPYE 256 (873)
Q Consensus 188 l~~L~~L~L~~n~--l~~-~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~n-------~l~~~~~~~ 256 (873)
+++|++|++++|. ++. ..+..+..+++|++|++++| .+.+ .+..+..+++|+.|+++.+ .+.+ .+..
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~ 260 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVA 260 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHH
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHH
Confidence 4455555555554 110 01111233456666666655 3332 4444455556666654333 2222 2235
Q ss_pred hcCCCCCcEE-EccCCcCcCcCCcCCCCCCCCeEEccCcccccccc-cccccCCCccEEeccCccccccC-CCCCCCCCC
Q 039344 257 YRNLVKLTIL-LLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNIS-ESFYIYPNLTYIDLSQNNFYGEI-SSDWGRCPK 333 (873)
Q Consensus 257 ~~~l~~L~~L-~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~-~~~~~~l~~ 333 (873)
+.++++|+.| .+.+.........+..+++|++|++++|.+++... ..+..+++|++|++++| +.+.. +.....+++
T Consensus 261 l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~ 339 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD 339 (594)
T ss_dssp HHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT
T ss_pred HhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC
Confidence 5666666666 33333222222233356677777777777554322 22446677777777776 43222 112224677
Q ss_pred CCeeeec---------cccCCccCCcccc-CCCCCCEEeccCCccCCCCCcccc-ccccccEEEec--C----ccccCCc
Q 039344 334 LSTLDFS---------INNITGNVPPEIG-HSSQLGVLDLSSNHIVGEIPIELG-KLNFFIKLVLA--H----NQLSGQL 396 (873)
Q Consensus 334 L~~L~l~---------~N~i~~~~~~~~~-~~~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~ 396 (873)
|+.|+++ .+.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++..
T Consensus 340 L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~ 419 (594)
T 2p1m_B 340 LRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEP 419 (594)
T ss_dssp CCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCC
T ss_pred CCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCc
Confidence 8888773 3456544333343 489999999999999876665555 58899999999 4 5666322
Q ss_pred -----ccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhh-hhhcccceecccCccccCCC
Q 039344 397 -----SPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQI-CIMQSLEKLNLSHNSLSGLI 470 (873)
Q Consensus 397 -----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~ 470 (873)
+..+..+++|+.|+|++ .+++..+..+.. ...+|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..
T Consensus 420 ~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~-~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~ 497 (594)
T 2p1m_B 420 LDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGT-YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKA 497 (594)
T ss_dssp THHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHH-HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHH
T ss_pred hhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHH-hchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHH
Confidence 22356788999999988 676554444443 13489999999999988766666 67899999999999997554
Q ss_pred ch-hhhccCCCcEEecCCCccc
Q 039344 471 PS-CFEKMNGLLHIDISYNELR 491 (873)
Q Consensus 471 ~~-~~~~~~~L~~l~ls~N~l~ 491 (873)
.. ....+++|++|++++|+++
T Consensus 498 ~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 498 LLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp HHHTGGGGGGSSEEEEESSCCB
T ss_pred HHHHHHhCCCCCEEeeeCCCCC
Confidence 44 3456899999999999884
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2e-27 Score=270.07 Aligned_cols=233 Identities=21% Similarity=0.231 Sum_probs=135.6
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecc
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLD 101 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (873)
+|+.|+|++|++++..|.+|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++.. ..++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 67777777777776666677777777777777777765444 666677777777777666322 22566666666
Q ss_pred ccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccC-CCCCCCEEEccCCcCccC
Q 039344 102 TNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIG-NLKSLSNLQLSENNFNGS 180 (873)
Q Consensus 102 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~ 180 (873)
+|.+++..+. .+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..+..+. .+++|++|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 6666644332 245566666666666655566666666666666666666665555554 566666666666666544
Q ss_pred CCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCC-CCCchhhcC
Q 039344 181 IPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLS-GAIPYEYRN 259 (873)
Q Consensus 181 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~ 259 (873)
. .+..+++|++|+|++|.+++.. ..+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.+. +..|..+..
T Consensus 185 ~--~~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 K--GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp E--CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred c--ccccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 2 2234556666666666665432 235555556666666655552 3444555555555555555554 333333444
Q ss_pred CCCCcEEEc
Q 039344 260 LVKLTILLL 268 (873)
Q Consensus 260 l~~L~~L~L 268 (873)
++.|+.+++
T Consensus 261 l~~L~~l~~ 269 (487)
T 3oja_A 261 NQRVQTVAK 269 (487)
T ss_dssp CHHHHHHHH
T ss_pred CCCCcEEec
Confidence 444443333
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=4.8e-27 Score=266.98 Aligned_cols=236 Identities=24% Similarity=0.244 Sum_probs=150.1
Q ss_pred CCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEE
Q 039344 68 FRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLY 147 (873)
Q Consensus 68 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 147 (873)
+++|++|+|++|.+++..|.+|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 3456666666666665555666666666666666666664333 666666666666666666322 226677777
Q ss_pred ccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCcccc-CCCCCCEEEccCcccC
Q 039344 148 IYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELG-NLRSLSNLSLGYNKLS 226 (873)
Q Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~ 226 (873)
+++|.++++.+. .+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|.|+
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 777777665543 345677777777777766666777777777777777777766666664 6777777777777776
Q ss_pred CCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccc-cccccccc
Q 039344 227 GSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLT-GNISESFY 305 (873)
Q Consensus 227 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~~~ 305 (873)
+.. ....+++|++|+|++|.+++..+ .+..+++|+.|++++|.+.+.++.+..+++|+.|++++|.+. +..+..+.
T Consensus 183 ~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 183 DVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred ccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 442 23346777777777777775444 366777777777777777765555666666666666666665 23333344
Q ss_pred cCCCccEEecc
Q 039344 306 IYPNLTYIDLS 316 (873)
Q Consensus 306 ~~~~L~~L~Ls 316 (873)
.++.|+.++++
T Consensus 260 ~l~~L~~l~~~ 270 (487)
T 3oja_A 260 KNQRVQTVAKQ 270 (487)
T ss_dssp TCHHHHHHHHH
T ss_pred hCCCCcEEecc
Confidence 44444444443
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.8e-25 Score=235.16 Aligned_cols=206 Identities=24% Similarity=0.245 Sum_probs=113.7
Q ss_pred CCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEcc
Q 039344 70 FFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIY 149 (873)
Q Consensus 70 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 149 (873)
+|++|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444443333344444444444444444443333444444555555555555544444455555555555555
Q ss_pred CCCCccccccccCCCCCCCEEEccCCcCccC-CCccccCCCCCcEEeccCCCCcccCCccccCCCCCC----EEEccCcc
Q 039344 150 SNSLSASILGKIGNLKSLSNLQLSENNFNGS-IPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLS----NLSLGYNK 224 (873)
Q Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~N~ 224 (873)
+|.+..+.+..+..+++|++|++++|.+++. +|..+..+++|++|++++|.+++..+..+..+++|+ +|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 5555554444555555666666666665543 355666666666666666666655555555444444 66777777
Q ss_pred cCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCc
Q 039344 225 LSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP 276 (873)
Q Consensus 225 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 276 (873)
+++..+..+. ..+|++|++++|++++..+..|..+++|+.|++++|++...
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 7644443333 33677777777777766555666677777777777766643
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.6e-25 Score=235.54 Aligned_cols=211 Identities=26% Similarity=0.300 Sum_probs=132.6
Q ss_pred CCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccc
Q 039344 13 IPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNL 92 (873)
Q Consensus 13 ~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 92 (873)
+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 444444 457777777777776666677777777777777777776666667777777777777777776666667777
Q ss_pred cccceeeccccccCCCCCccccCCcccCcccccccccccc-cCccccCCCCCcEEEccCCCCccccccccCCCCCCC---
Q 039344 93 SNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGS-IPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLS--- 168 (873)
Q Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--- 168 (873)
++|++|++++|++++..+..+..+++|++|++++|.+++. +|..|..+++|++|++++|+++++.+..|..+++|+
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 179 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCC
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccc
Confidence 7777777777777655555666667777777777766642 466666666666666666666665555555554444
Q ss_pred -EEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccC
Q 039344 169 -NLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLS 226 (873)
Q Consensus 169 -~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 226 (873)
+|++++|.+++..+..+.. .+|++|++++|.+++..+..|..+++|++|++++|++.
T Consensus 180 l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 180 LSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp EEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred eeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 5666666665444333332 25555555555555444444455555555555555554
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.8e-24 Score=226.49 Aligned_cols=201 Identities=26% Similarity=0.300 Sum_probs=107.0
Q ss_pred CceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 47 LATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
.+.+++++++++ .+|..+. ++|++|+|++|+++...+.+|.++++|++|+|++|+++...+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 344444444444 3333332 3444444444444444444444455555555555554433333344455555555555
Q ss_pred cccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCC
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIP 206 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 206 (873)
|.+++..+..|..+++|++|++++|+++.+.+..|..+++|++|+|++|.+++..+..|..+++|++|++++|.++...+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 55554444445555555555555555555555555555555555555555554444455556666666666666655545
Q ss_pred ccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCC
Q 039344 207 SELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLS 250 (873)
Q Consensus 207 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 250 (873)
..|..+++|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 55666666666666666666555555666666666666666654
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.3e-24 Score=225.77 Aligned_cols=201 Identities=28% Similarity=0.349 Sum_probs=96.1
Q ss_pred CCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccC
Q 039344 71 FSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYS 150 (873)
Q Consensus 71 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 150 (873)
.+.+++++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++...+..|..+++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 444555555544 2333332 3445555555555443334444555555555555555433333344455555555555
Q ss_pred CCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcc
Q 039344 151 NSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIP 230 (873)
Q Consensus 151 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 230 (873)
|+++.+.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.++...+..|..+++|++|+|++|+++...+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 55544444444445555555555555544444444445555555555555544333344445555555555555544444
Q ss_pred cccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCc
Q 039344 231 ISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFR 274 (873)
Q Consensus 231 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 274 (873)
..|..+++|++|+|++|++++..+..|..+++|+.|++++|++.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 44444455555555555554444444444455555555555443
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3.1e-24 Score=226.68 Aligned_cols=202 Identities=26% Similarity=0.279 Sum_probs=112.1
Q ss_pred ccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccc
Q 039344 17 LRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLA 96 (873)
Q Consensus 17 ~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 96 (873)
++++++++.+++++|+++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|.+++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 556666777777777776 4454443 566777777777766666666666777777777766664322 24556666
Q ss_pred eeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCc
Q 039344 97 TLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENN 176 (873)
Q Consensus 97 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 176 (873)
+|+|++|+++ .+|..+.++++|++|++++|++++..+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666665 445555555555555555555554444455555555555555555555544445555555555555555
Q ss_pred CccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCccc
Q 039344 177 FNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKL 225 (873)
Q Consensus 177 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 225 (873)
++...+..|..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 55443344444445555555555444 3333333444444444444444
No 329
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.3e-25 Score=257.28 Aligned_cols=187 Identities=15% Similarity=0.172 Sum_probs=147.5
Q ss_pred CCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcch-----hHHHHHHHHHHHHhccCCceeeEEeEEEecceeEEE
Q 039344 605 DDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMT-----FQQEFLNEVKALTEIWHRNIVKVYGFCLHVRHLFIV 679 (873)
Q Consensus 605 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 679 (873)
...+.||+|+||+||+|+.. ++.+++|+.......... ..+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 34578999999999999554 788899886543222111 134589999999999999999777777777888999
Q ss_pred EEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCC
Q 039344 680 YEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKP 759 (873)
Q Consensus 680 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 759 (873)
|||+++++|.+++.. +..++.|+++|++|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999864 458999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------cccccccccccccccccc--CCCCCcchhHHHHHHHHHHHhCCCCCc
Q 039344 760 DSSN-------WTELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRD 808 (873)
Q Consensus 760 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~sDv~s~G~il~el~tg~~P~~ 808 (873)
.... .....||+.|||||++.. ..|+..+|+||...-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3221 135679999999999886 557888999999999988888877753
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.1e-24 Score=228.44 Aligned_cols=226 Identities=23% Similarity=0.270 Sum_probs=141.3
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecc
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLD 101 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (873)
.+..+++.++.+... ..+..+++|++|++++|.++ .++ .+..+++|++|++++|.+++. ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 344555666655533 23455666667777766666 332 356666666666666666642 356666666666666
Q ss_pred ccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCC
Q 039344 102 TNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI 181 (873)
Q Consensus 102 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 181 (873)
+|++++..+..|.++++|++|++++|.+++..+..|+.+++|++|++++|+++++.+..|..+++|++|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 66666555555666666666666666666555555666666666666666666666666666666666666666666555
Q ss_pred CccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCC
Q 039344 182 PPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNL 260 (873)
Q Consensus 182 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 260 (873)
+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.+ .+++|++|++..|.+++.+|..++.+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCccccc
Confidence 5556666666666666666666555556666666666666666552 24456666666666666666555444
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=4.1e-24 Score=225.72 Aligned_cols=204 Identities=26% Similarity=0.288 Sum_probs=134.8
Q ss_pred cccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCccc
Q 039344 40 SLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSL 119 (873)
Q Consensus 40 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 119 (873)
.+.++++++++++++|.++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|++++..+ . ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcC
Confidence 3667777888888888887 5565554 577788888888776667777777777777777777774322 2 566777
Q ss_pred CcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCC
Q 039344 120 SNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTN 199 (873)
Q Consensus 120 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 199 (873)
++|+|++|.++ .+|..+..+++|++|++++|+++.+.+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 77777777776 55666666777777777777776666666666666666666666666555555666666666666666
Q ss_pred CCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCC
Q 039344 200 SLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLS 250 (873)
Q Consensus 200 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 250 (873)
+++...+..|..+++|++|+|++|+|+ .+|..+..+.+|+.|+|++|.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 666544445556666666666666665 34444444555555555555554
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.4e-24 Score=227.59 Aligned_cols=221 Identities=24% Similarity=0.301 Sum_probs=196.8
Q ss_pred CCcccccCCccccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCC
Q 039344 6 NNSLYDSIPSELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSI 85 (873)
Q Consensus 6 ~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 85 (873)
.+.+.+. ..+..+++|++|++++|.++ .. ..+..+++|++|+|++|++++ + ..+..+++|++|+|++|.+++..
T Consensus 28 ~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~ 101 (272)
T 3rfs_A 28 KKSVTDA--VTQNELNSIDQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLP 101 (272)
T ss_dssp CSCTTSE--ECHHHHTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCC
T ss_pred Ccccccc--cccccccceeeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccC
Confidence 3444444 33567889999999999998 33 358999999999999999995 3 47899999999999999999888
Q ss_pred CcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCC
Q 039344 86 PPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLK 165 (873)
Q Consensus 86 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 165 (873)
+..|.++++|++|++++|++++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|+++++.+..|..++
T Consensus 102 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 181 (272)
T 3rfs_A 102 NGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT 181 (272)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCc
Confidence 88899999999999999999987788899999999999999999977777889999999999999999998888899999
Q ss_pred CCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCc
Q 039344 166 SLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNL 239 (873)
Q Consensus 166 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 239 (873)
+|++|+|++|++++..+..+..+++|++|++++|.+.+ .+++|+.|++..|.+++.+|..++.+...
T Consensus 182 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 182 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred cCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 99999999999998888889999999999999998874 35689999999999999999888776543
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=6.5e-24 Score=218.05 Aligned_cols=196 Identities=20% Similarity=0.206 Sum_probs=122.9
Q ss_pred CCceEEccCCcccccCCCCccCCCCCCEEEcccCC-CCCCCCcccccccccceeeccc-cccCCCCCccccCCcccCccc
Q 039344 46 NLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNK-LSGSIPPSLGNLSNLATLYLDT-NSLSNSIPSELGNLRSLSNLQ 123 (873)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 123 (873)
+|++|++++|+++++.+.+|.++++|++|++++|+ ++.+.+.+|.++++|++|++++ |+++...+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666665555556666666666666664 5544555666666666666665 666654455566666666666
Q ss_pred ccccccccccCccccCCCCCc---EEEccCC-CCccccccccCCCCCCC-EEEccCCcCccCCCccccCCCCCcEEeccC
Q 039344 124 LNNNILSGSIPHSLGNLTNLA---TLYIYSN-SLSASILGKIGNLKSLS-NLQLSENNFNGSIPPSLGNLSNLATLYLDT 198 (873)
Q Consensus 124 L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 198 (873)
+++|.+++ +|. |..+++|+ +|++++| .++.+.+..|.++++|+ +|++++|+++...+..|.. ++|++|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 66666663 444 55666665 6777766 66666666666677777 7777777776444444444 6777777777
Q ss_pred CC-CcccCCccccCC-CCCCEEEccCcccCCCcccccCCCCCccEEecccc
Q 039344 199 NS-LSYSIPSELGNL-RSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFEN 247 (873)
Q Consensus 199 n~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 247 (873)
|+ ++...+..|..+ ++|++|++++|+++...+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 74 765556667777 7777777777777643332 4567777777665
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=8.3e-24 Score=217.24 Aligned_cols=196 Identities=22% Similarity=0.278 Sum_probs=96.6
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCc-ccccCCCCccCCCCCCEEEccc-CCCCCCCCcccccccccceee
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNS-LSGSIPGEIGNFRFFSDLELSN-NKLSGSIPPSLGNLSNLATLY 99 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 99 (873)
+|++|+|++|+++++.+.+|.++++|++|++++|+ ++++.+.+|.++++|++|++++ |+++...+.+|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555554444455555555555555554 5444444555555555555554 555544444555555555555
Q ss_pred ccccccCCCCCccccCCcccC---ccccccc-ccccccCccccCCCCCc-EEEccCCCCccccccccCCCCCCCEEEccC
Q 039344 100 LDTNSLSNSIPSELGNLRSLS---NLQLNNN-ILSGSIPHSLGNLTNLA-TLYIYSNSLSASILGKIGNLKSLSNLQLSE 174 (873)
Q Consensus 100 L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (873)
+++|++++ +|. |..+++|+ +|++++| .+++..+..|..+++|+ +|++++|+++.+....|.. ++|++|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 55555553 333 44444444 5555555 55443344455555555 5555555555444444443 4555555555
Q ss_pred Cc-CccCCCccccCC-CCCcEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 039344 175 NN-FNGSIPPSLGNL-SNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYN 223 (873)
Q Consensus 175 n~-i~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 223 (873)
|+ ++...+..|..+ ++|+.|++++|.++.. |.. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 52 544444445555 5555555555555422 221 3444555554443
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2.6e-25 Score=243.51 Aligned_cols=251 Identities=18% Similarity=0.211 Sum_probs=119.4
Q ss_pred cCCcccccCCccccCCCCCCEEECCCCcccccCC----ccccCCC-CCceEEccCCcccccCCCCccCC-----CCCCEE
Q 039344 5 YNNSLYDSIPSELRNLKSLSDLELGNNKLSGSIP----HSLGNLT-NLATLYIHTNSLSGSIPGEIGNF-----RFFSDL 74 (873)
Q Consensus 5 ~~n~~~~~~p~~~~~l~~l~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L 74 (873)
++|++++.+|..+...++|++|+|++|++++..+ +.|..++ +|++|+|++|++++..+..+..+ ++|++|
T Consensus 6 s~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L 85 (362)
T 3goz_A 6 TLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSL 85 (362)
T ss_dssp CCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEE
T ss_pred ccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEE
Confidence 4455555555555544455555555555554444 4555555 55555555555554444444433 555555
Q ss_pred EcccCCCCCCCCcccccc-----cccceeeccccccCCCCCccccCCcccCcccccccccccccCccccC-CCCCcEEEc
Q 039344 75 ELSNNKLSGSIPPSLGNL-----SNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGN-LTNLATLYI 148 (873)
Q Consensus 75 ~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L 148 (873)
+|++|.+++..+..+... ++|++|+|++|+++...+..+.. .+.. .++|++|+|
T Consensus 86 ~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~--------------------~l~~~~~~L~~L~L 145 (362)
T 3goz_A 86 NLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ--------------------AFSNLPASITSLNL 145 (362)
T ss_dssp ECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH--------------------HHTTSCTTCCEEEC
T ss_pred ECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH--------------------HHHhCCCceeEEEc
Confidence 555555554443332222 45555555555554333322221 1111 134555555
Q ss_pred cCCCCccccccc----cCCCC-CCCEEEccCCcCccCCCccc----cCC-CCCcEEeccCCCCccc----CCccccC-CC
Q 039344 149 YSNSLSASILGK----IGNLK-SLSNLQLSENNFNGSIPPSL----GNL-SNLATLYLDTNSLSYS----IPSELGN-LR 213 (873)
Q Consensus 149 ~~n~l~~~~~~~----~~~l~-~L~~L~L~~n~i~~~~~~~~----~~l-~~L~~L~L~~n~l~~~----~~~~~~~-l~ 213 (873)
++|.++...... +..++ +|++|+|++|++++..+..+ ..+ ++|++|+|++|.++.. ++..+.. .+
T Consensus 146 s~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~ 225 (362)
T 3goz_A 146 RGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPN 225 (362)
T ss_dssp TTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCT
T ss_pred cCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCC
Confidence 555444322211 22232 45555555555544333222 222 3555555555555532 2223333 23
Q ss_pred CCCEEEccCcccCCCcc----cccCCCCCccEEecccccCCCCCc-------hhhcCCCCCcEEEccCCcCcC
Q 039344 214 SLSNLSLGYNKLSGSIP----ISMGNLSNLTYLNLFENSLSGAIP-------YEYRNLVKLTILLLGHNQFRG 275 (873)
Q Consensus 214 ~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~-------~~~~~l~~L~~L~L~~N~l~~ 275 (873)
+|++|+|++|+|++..+ ..+..+++|++|+|++|.+....+ ..+..+++|+.|++++|++..
T Consensus 226 ~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 226 HVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp TCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred CceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 56666666666554332 223445566666666665433322 234455666666666666654
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=5.7e-25 Score=240.84 Aligned_cols=249 Identities=21% Similarity=0.221 Sum_probs=168.6
Q ss_pred EccCCcccccCCCCccCCCCCCEEEcccCCCCCCCC----ccccccc-ccceeeccccccCCCCCccccCC-----cccC
Q 039344 51 YIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIP----PSLGNLS-NLATLYLDTNSLSNSIPSELGNL-----RSLS 120 (873)
Q Consensus 51 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L~ 120 (873)
.|+.|.+++.+|..+...++|++|+|++|.+++..+ .+|..++ +|++|+|++|+++...+..+..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444444444444444444444443333 4444454 55555555555554444444443 6666
Q ss_pred cccccccccccccCcc----ccCC-CCCcEEEccCCCCcccccccc----CC-CCCCCEEEccCCcCccCCCc----ccc
Q 039344 121 NLQLNNNILSGSIPHS----LGNL-TNLATLYIYSNSLSASILGKI----GN-LKSLSNLQLSENNFNGSIPP----SLG 186 (873)
Q Consensus 121 ~L~L~~n~l~~~~~~~----~~~l-~~L~~L~L~~n~l~~~~~~~~----~~-l~~L~~L~L~~n~i~~~~~~----~~~ 186 (873)
+|+|++|.+++..+.. +..+ ++|++|+|++|+++......+ .. .++|++|+|++|.+++.... .+.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 6666666666544443 3334 788888888888877665543 34 36999999999999864433 345
Q ss_pred CCC-CCcEEeccCCCCcccCCccc----cCC-CCCCEEEccCcccCCC----cccccCC-CCCccEEecccccCCCCCc-
Q 039344 187 NLS-NLATLYLDTNSLSYSIPSEL----GNL-RSLSNLSLGYNKLSGS----IPISMGN-LSNLTYLNLFENSLSGAIP- 254 (873)
Q Consensus 187 ~l~-~L~~L~L~~n~l~~~~~~~~----~~l-~~L~~L~L~~N~l~~~----~~~~~~~-l~~L~~L~L~~n~l~~~~~- 254 (873)
.++ +|++|+|++|.+++..+..+ ..+ ++|++|+|++|+|++. ++..+.. .++|++|+|++|.+++..+
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred cCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 555 99999999999997666544 455 6999999999999864 3334444 4699999999999997665
Q ss_pred ---hhhcCCCCCcEEEccCCcCcC--------cCCcCCCCCCCCeEEccCcccccc
Q 039344 255 ---YEYRNLVKLTILLLGHNQFRG--------PIPILRNLTSLERVRLDRNYLTGN 299 (873)
Q Consensus 255 ---~~~~~l~~L~~L~L~~N~l~~--------~~~~l~~l~~L~~L~L~~n~l~~~ 299 (873)
..+..+++|+.|++++|.+.. ....+..+++|+.|++++|.+...
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 335678999999999999443 334677899999999999999865
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=224.77 Aligned_cols=225 Identities=19% Similarity=0.214 Sum_probs=175.6
Q ss_pred CCCceEEccCCcccccC-CC--CccCCCCCCEEEcccCCCCCCCCccc--ccccccceeeccccccCCCCC----ccccC
Q 039344 45 TNLATLYIHTNSLSGSI-PG--EIGNFRFFSDLELSNNKLSGSIPPSL--GNLSNLATLYLDTNSLSNSIP----SELGN 115 (873)
Q Consensus 45 ~~L~~L~L~~n~l~~~~-p~--~~~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~ 115 (873)
..++.|.+.++.++... .. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 35788888887776211 10 11234669999999999988888888 889999999999999986544 34567
Q ss_pred CcccCcccccccccccccCccccCCCCCcEEEccCCCCcc---cc-ccccCCCCCCCEEEccCCcCccCCCc----cccC
Q 039344 116 LRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSA---SI-LGKIGNLKSLSNLQLSENNFNGSIPP----SLGN 187 (873)
Q Consensus 116 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~-~~~~~~l~~L~~L~L~~n~i~~~~~~----~~~~ 187 (873)
+++|++|+|++|.+++..+..|+.+++|++|+|++|++.+ +. ...+..+++|++|+|++|+++.. +. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhc
Confidence 8899999999999987777889999999999999998754 22 22346788999999999998732 22 3567
Q ss_pred CCCCcEEeccCCCCcccCCccccCC---CCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCc
Q 039344 188 LSNLATLYLDTNSLSYSIPSELGNL---RSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLT 264 (873)
Q Consensus 188 l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 264 (873)
+++|++|+|++|.+++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8899999999999997777777766 69999999999998 5566554 7999999999999865 33 67889999
Q ss_pred EEEccCCcCcC
Q 039344 265 ILLLGHNQFRG 275 (873)
Q Consensus 265 ~L~L~~N~l~~ 275 (873)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999998864
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=6.1e-25 Score=243.17 Aligned_cols=247 Identities=19% Similarity=0.190 Sum_probs=132.4
Q ss_pred CCCCcccccCCccccCCCCCceEEccCCcccccC----CCCccCCCCCCEEEcccCCCC---CCCCccc-------cccc
Q 039344 28 LGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSI----PGEIGNFRFFSDLELSNNKLS---GSIPPSL-------GNLS 93 (873)
Q Consensus 28 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~L~~n~l~---~~~~~~~-------~~l~ 93 (873)
+....+. .++..+..+++|++|+|++|+++... +..+..+++|++|+|++|.+. +.+|..+ ..++
T Consensus 16 l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~ 94 (386)
T 2ca6_A 16 ITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCP 94 (386)
T ss_dssp CCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCT
T ss_pred CCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCC
Confidence 3333443 45666677777777777777777543 334566777777777775433 3334333 4566
Q ss_pred ccceeeccccccCC----CCCccccCCcccCcccccccccccccCcccc----CC---------CCCcEEEccCCCCccc
Q 039344 94 NLATLYLDTNSLSN----SIPSELGNLRSLSNLQLNNNILSGSIPHSLG----NL---------TNLATLYIYSNSLSAS 156 (873)
Q Consensus 94 ~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l---------~~L~~L~L~~n~l~~~ 156 (873)
+|++|+|++|+++. .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++..
T Consensus 95 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~ 174 (386)
T 2ca6_A 95 KLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG 174 (386)
T ss_dssp TCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG
T ss_pred cccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcH
Confidence 66666666666664 2455566666666666666666533332222 22 5666666666666521
Q ss_pred c-c---cccCCCCCCCEEEccCCcCcc-----CCCccccCCCCCcEEeccCCCCc----ccCCccccCCCCCCEEEccCc
Q 039344 157 I-L---GKIGNLKSLSNLQLSENNFNG-----SIPPSLGNLSNLATLYLDTNSLS----YSIPSELGNLRSLSNLSLGYN 223 (873)
Q Consensus 157 ~-~---~~~~~l~~L~~L~L~~n~i~~-----~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~N 223 (873)
. + ..+..+++|++|+|++|.++. ..+..+..+++|++|+|++|.++ ..+|..+..+++|++|+|++|
T Consensus 175 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n 254 (386)
T 2ca6_A 175 SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDC 254 (386)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTC
T ss_pred HHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCC
Confidence 1 1 234455566666666666552 12224555556666666666653 234445555555666666655
Q ss_pred ccCCC----ccccc--CCCCCccEEecccccCCC----CCchhh-cCCCCCcEEEccCCcCcC
Q 039344 224 KLSGS----IPISM--GNLSNLTYLNLFENSLSG----AIPYEY-RNLVKLTILLLGHNQFRG 275 (873)
Q Consensus 224 ~l~~~----~~~~~--~~l~~L~~L~L~~n~l~~----~~~~~~-~~l~~L~~L~L~~N~l~~ 275 (873)
+|++. ++..+ ..+++|++|+|++|.++. .+|..+ .++++|+.|++++|++++
T Consensus 255 ~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 255 LLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp CCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 55533 22233 224555555555555554 233333 334555555555554443
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.6e-24 Score=239.75 Aligned_cols=243 Identities=19% Similarity=0.164 Sum_probs=110.7
Q ss_pred CccccCCCCCcEEEccCCCCcccccc----ccCCCCCCCEEEccCCcC---ccCCCccc-------cCCCCCcEEeccCC
Q 039344 134 PHSLGNLTNLATLYIYSNSLSASILG----KIGNLKSLSNLQLSENNF---NGSIPPSL-------GNLSNLATLYLDTN 199 (873)
Q Consensus 134 ~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~L~~n~i---~~~~~~~~-------~~l~~L~~L~L~~n 199 (873)
+..+..+++|++|+|++|.++...+. .+..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|++|
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 33444444444444444444433221 233445555555555322 22223222 44555555555555
Q ss_pred CCcc----cCCccccCCCCCCEEEccCcccCCCcccccCC----C---------CCccEEecccccCCC-CCc---hhhc
Q 039344 200 SLSY----SIPSELGNLRSLSNLSLGYNKLSGSIPISMGN----L---------SNLTYLNLFENSLSG-AIP---YEYR 258 (873)
Q Consensus 200 ~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~L~~n~l~~-~~~---~~~~ 258 (873)
.++. .++..+..+++|++|+|++|.++...+..+.. + ++|++|+|++|+++. ..+ ..+.
T Consensus 105 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 184 (386)
T 2ca6_A 105 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 184 (386)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH
Confidence 5553 23444555555555555555554322222221 2 555555555555541 222 2344
Q ss_pred CCCCCcEEEccCCcCcC-----cCC-cCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCC
Q 039344 259 NLVKLTILLLGHNQFRG-----PIP-ILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCP 332 (873)
Q Consensus 259 ~l~~L~~L~L~~N~l~~-----~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~ 332 (873)
.+++|++|++++|++.. ..+ .+..+++|+.|+|++|.++.... ..++..+..++
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~--------------------~~l~~~l~~~~ 244 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS--------------------SALAIALKSWP 244 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH--------------------HHHHHHGGGCT
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHH--------------------HHHHHHHccCC
Confidence 45555555555555541 111 34444444444444444431000 22333444445
Q ss_pred CCCeeeeccccCCcc----CCcccc--CCCCCCEEeccCCccCC----CCCccc-cccccccEEEecCccccCCc
Q 039344 333 KLSTLDFSINNITGN----VPPEIG--HSSQLGVLDLSSNHIVG----EIPIEL-GKLNFFIKLVLAHNQLSGQL 396 (873)
Q Consensus 333 ~L~~L~l~~N~i~~~----~~~~~~--~~~~L~~L~Ls~N~i~~----~~~~~~-~~l~~L~~L~L~~N~l~~~~ 396 (873)
+|+.|+|++|.|++. ++..+. .+++|+.|+|++|.|++ .+|..+ .++++|+.|++++|.+++..
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 555555555555433 233332 25555555555555554 244444 33555566666666555433
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.4e-22 Score=216.15 Aligned_cols=210 Identities=27% Similarity=0.443 Sum_probs=141.6
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTN 103 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (873)
..+.+..+.++...+ +..+++|++|++++|.++ .+| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|
T Consensus 22 ~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 22 IKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCC
Confidence 334455555553322 445667777777777776 344 46667777777777777764333 677777777777777
Q ss_pred ccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCc
Q 039344 104 SLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPP 183 (873)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 183 (873)
++++ + ..+..+++|++|++++|.+++ ++ .+..+++|++|++++|+++++.+ +..+++|++|+|++|++++..+
T Consensus 96 ~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~- 168 (308)
T 1h6u_A 96 PLKN-V-SAIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP- 168 (308)
T ss_dssp CCSC-C-GGGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred cCCC-c-hhhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-
Confidence 7764 2 356677777777777777764 33 27777777777777777766544 6777777777777777775432
Q ss_pred cccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCC
Q 039344 184 SLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSG 251 (873)
Q Consensus 184 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 251 (873)
+..+++|+.|++++|.+++..+ +..+++|++|++++|++++.. .+..+++|++|++++|++++
T Consensus 169 -l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 -LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred -hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 7777777788887777774433 677778888888888877544 36777888888888888764
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=4.9e-22 Score=205.56 Aligned_cols=177 Identities=27% Similarity=0.322 Sum_probs=84.1
Q ss_pred CceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 47 LATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
.++++++++.++ .+|..+. ++++.|+|++|.+++..+.+|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 444555555555 3443333 3455555555555544444455555555555555555544444444444444444444
Q ss_pred cccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCC
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIP 206 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 206 (873)
|.+++..+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 44443334444444555555555555544444444444445555555554444333344444444444444444443333
Q ss_pred ccccCCCCCCEEEccCcccC
Q 039344 207 SELGNLRSLSNLSLGYNKLS 226 (873)
Q Consensus 207 ~~~~~l~~L~~L~L~~N~l~ 226 (873)
..|..+++|++|+|++|++.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBC
T ss_pred HHHhCCCCCCEEEeeCCcee
Confidence 34444444444444444443
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.8e-22 Score=206.37 Aligned_cols=180 Identities=23% Similarity=0.291 Sum_probs=163.6
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecc
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLD 101 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (873)
..+++++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4678999999998 6776665 689999999999998888899999999999999999998888889999999999999
Q ss_pred ccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCC
Q 039344 102 TNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI 181 (873)
Q Consensus 102 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 181 (873)
+|+++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+++++.+..|..+++|++|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 99999877788999999999999999999777777899999999999999999988888999999999999999999888
Q ss_pred CccccCCCCCcEEeccCCCCccc
Q 039344 182 PPSLGNLSNLATLYLDTNSLSYS 204 (873)
Q Consensus 182 ~~~~~~l~~L~~L~L~~n~l~~~ 204 (873)
+..|..+++|+.|++++|.+...
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 88899999999999999999854
No 343
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=3.4e-24 Score=232.60 Aligned_cols=250 Identities=17% Similarity=0.205 Sum_probs=170.1
Q ss_pred ccEEecccccCCCCCchhhcCC--CCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccc-cccccccCCCccEEec
Q 039344 239 LTYLNLFENSLSGAIPYEYRNL--VKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGN-ISESFYIYPNLTYIDL 315 (873)
Q Consensus 239 L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~~~~L~~L~L 315 (873)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+.+..+++|++|++++|.+++. .+..+..+++|++|+|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 455566655544 3444444 566666666666666555555667777777777776654 4455667777777777
Q ss_pred cCccccccCCCCCCCCCCCCeeeeccc-cCCcc-CCccccCCCCCCEEeccCC-ccCCC-CCccccccc-cccEEEecCc
Q 039344 316 SQNNFYGEISSDWGRCPKLSTLDFSIN-NITGN-VPPEIGHSSQLGVLDLSSN-HIVGE-IPIELGKLN-FFIKLVLAHN 390 (873)
Q Consensus 316 s~N~l~~~~~~~~~~l~~L~~L~l~~N-~i~~~-~~~~~~~~~~L~~L~Ls~N-~i~~~-~~~~~~~l~-~L~~L~L~~N 390 (873)
++|.+++..+..+..+++|+.|++++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|++++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 777777666666777777777887777 56642 4555677778888888888 77643 455667777 7888888887
Q ss_pred --ccc-CCcccccccccccccccccccc-cccccCCCcCchhhhhhhcccccCCc-cCcccchhhhhhcccceecccCcc
Q 039344 391 --QLS-GQLSPKLGSLVQLEHLDLSSNR-LSNSIPKSLGNLELIHLSELDLSRNF-LREAIPSQICIMQSLEKLNLSHNS 465 (873)
Q Consensus 391 --~l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~ 465 (873)
.++ +.++..+..+++|+.|+|++|. +++..+..+..+. +|++|++++|. ++......+..+++|+.|++++|
T Consensus 206 ~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~--~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 206 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN--YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp GGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT--TCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred cccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCC--CCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 444 3455566777888888888888 6666666776654 88888888884 43333346778889999999988
Q ss_pred ccCCCchhhhcc-CCCcEEecCCCcccccCCCC
Q 039344 466 LSGLIPSCFEKM-NGLLHIDISYNELRGSIPNS 497 (873)
Q Consensus 466 l~~~~~~~~~~~-~~L~~l~ls~N~l~~~~p~~ 497 (873)
++. ..+..+ ..+..|++++|.+++..|+.
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccCCc
Confidence 432 334444 33677778999998877764
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.2e-22 Score=217.36 Aligned_cols=226 Identities=18% Similarity=0.198 Sum_probs=189.2
Q ss_pred CCCCEEECCCCcccccC-C--ccccCCCCCceEEccCCcccccCCCCc--cCCCCCCEEEcccCCCCCCCC----ccccc
Q 039344 21 KSLSDLELGNNKLSGSI-P--HSLGNLTNLATLYIHTNSLSGSIPGEI--GNFRFFSDLELSNNKLSGSIP----PSLGN 91 (873)
Q Consensus 21 ~~l~~L~L~~n~l~~~~-p--~~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~ 91 (873)
..++.|.+.++.++... . ..+..+++|++|++++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 35889999998876221 1 123345779999999999999999988 999999999999999997555 44567
Q ss_pred ccccceeeccccccCCCCCccccCCcccCcccccccccccc--c--CccccCCCCCcEEEccCCCCcccccc---ccCCC
Q 039344 92 LSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGS--I--PHSLGNLTNLATLYIYSNSLSASILG---KIGNL 164 (873)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~l 164 (873)
+++|++|+|++|++.+..+..|.++++|++|+|++|++.+. . +..+..+++|++|+|++|+++.+... .+..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 99999999999999988889999999999999999998642 2 23457899999999999999754332 35788
Q ss_pred CCCCEEEccCCcCccCCCccccCC---CCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccE
Q 039344 165 KSLSNLQLSENNFNGSIPPSLGNL---SNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTY 241 (873)
Q Consensus 165 ~~L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 241 (873)
++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998878777776 69999999999999 5676664 8999999999999964 43 688999999
Q ss_pred EecccccCCC
Q 039344 242 LNLFENSLSG 251 (873)
Q Consensus 242 L~L~~n~l~~ 251 (873)
|+|++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=3.7e-24 Score=232.32 Aligned_cols=221 Identities=20% Similarity=0.247 Sum_probs=124.5
Q ss_pred CCEEECCCCcccccCCccccCC--CCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCC-CCcccccccccceee
Q 039344 23 LSDLELGNNKLSGSIPHSLGNL--TNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGS-IPPSLGNLSNLATLY 99 (873)
Q Consensus 23 l~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~ 99 (873)
++.|++++|++. |..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 566777776665 3445555 6677777777766644443 44566666666666666543 455566666666666
Q ss_pred ccccccCCCCCccccCCcccCccccccc-ccccc-cCccccCCCCCcEEEccCC-CCccc-cccccCCCC-CCCEEEccC
Q 039344 100 LDTNSLSNSIPSELGNLRSLSNLQLNNN-ILSGS-IPHSLGNLTNLATLYIYSN-SLSAS-ILGKIGNLK-SLSNLQLSE 174 (873)
Q Consensus 100 L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~L~~ 174 (873)
|++|++++..+..+..+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. .+..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 6666666555556666666666666666 45432 4444556666666666666 55532 233455555 666666666
Q ss_pred C--cCc-cCCCccccCCCCCcEEeccCCC-CcccCCccccCCCCCCEEEccCcc-cCCCcccccCCCCCccEEecccc
Q 039344 175 N--NFN-GSIPPSLGNLSNLATLYLDTNS-LSYSIPSELGNLRSLSNLSLGYNK-LSGSIPISMGNLSNLTYLNLFEN 247 (873)
Q Consensus 175 n--~i~-~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n 247 (873)
| .++ ..++..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+..+++|++|++++|
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 6 333 2233444455566666666665 444444455555556666665553 22111123445555555555555
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3.5e-22 Score=213.12 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=15.4
Q ss_pred CCCCCEEEcccCCCCCCCCcccccccccceeeccccccC
Q 039344 68 FRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLS 106 (873)
Q Consensus 68 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 106 (873)
+++|++|++++|.++. ++ .+..+++|++|+|++|+++
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~ 76 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQIT 76 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCC
Confidence 3444444444444442 22 3444444444444444443
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=4.8e-22 Score=216.42 Aligned_cols=239 Identities=19% Similarity=0.174 Sum_probs=107.2
Q ss_pred eEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCC-ccccCCcccCc-ccccc
Q 039344 49 TLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIP-SELGNLRSLSN-LQLNN 126 (873)
Q Consensus 49 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~-L~L~~ 126 (873)
+++.++++++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 3444444444 3443331 344455555555543333444555555555555554433222 23444444433 33334
Q ss_pred cccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccC-CcCccCCCccccCCC-CCcEEeccCCCCccc
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSE-NNFNGSIPPSLGNLS-NLATLYLDTNSLSYS 204 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~ 204 (873)
|+++...|..|..+++|++|++++|++..+.+..+....++..|++.+ +++....+..|..+. .++.|+|++|+|+.+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 444444444445555555555555555444444444444444444433 334433334444432 355555555555532
Q ss_pred CCccccCCCCCCEEEcc-CcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCC
Q 039344 205 IPSELGNLRSLSNLSLG-YNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNL 283 (873)
Q Consensus 205 ~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l 283 (873)
.+..| ...+|++|+++ +|.++.+.+..|.++++|++|+|++|+|+.+.+..| .+|+.|.+.++.--...|.+..+
T Consensus 170 ~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~l~~l 245 (350)
T 4ay9_X 170 HNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPTLEKL 245 (350)
T ss_dssp CTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCCTTTC
T ss_pred Chhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCCchhC
Confidence 22222 33445555554 244443333445555555555555555554433332 23333333333222233345555
Q ss_pred CCCCeEEccCc
Q 039344 284 TSLERVRLDRN 294 (873)
Q Consensus 284 ~~L~~L~L~~n 294 (873)
++|+.+++.++
T Consensus 246 ~~L~~l~l~~~ 256 (350)
T 4ay9_X 246 VALMEASLTYP 256 (350)
T ss_dssp CSCCEEECSCH
T ss_pred cChhhCcCCCC
Confidence 55555555443
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4.6e-22 Score=216.53 Aligned_cols=203 Identities=19% Similarity=0.187 Sum_probs=123.5
Q ss_pred CcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCC-CccccCCCCCcE-Eecc
Q 039344 120 SNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI-PPSLGNLSNLAT-LYLD 197 (873)
Q Consensus 120 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~-L~L~ 197 (873)
++++.++++++ .+|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+.+ +.+|.+++++++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 34555666666 455544 256777777777777666667777777777777777764433 345666666554 4555
Q ss_pred CCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEeccc-ccCCCCCchhhcCCC-CCcEEEccCCcCcC
Q 039344 198 TNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFE-NSLSGAIPYEYRNLV-KLTILLLGHNQFRG 275 (873)
Q Consensus 198 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 275 (873)
+|+++.+.|..|..+++|++|++++|+|+...+..+....++..|++.+ |.+..+.+..|..+. .++.|++++|+++.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 6777766667777777777777777777765555566666667777654 456555555555553 46666666666665
Q ss_pred cCCcCCCCCCCCeEEccC-cccccccccccccCCCccEEeccCccccccCC
Q 039344 276 PIPILRNLTSLERVRLDR-NYLTGNISESFYIYPNLTYIDLSQNNFYGEIS 325 (873)
Q Consensus 276 ~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~ 325 (873)
..+.....++|++|++.+ |.++.++...|..+++|++|||++|+|+...+
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 444433445555665543 45555555555555555555555555554333
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.5e-22 Score=212.28 Aligned_cols=154 Identities=17% Similarity=0.100 Sum_probs=122.1
Q ss_pred HHHHHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcc---------------hhHHHHHHHHHHHHhccC
Q 039344 596 EIIRATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEM---------------TFQQEFLNEVKALTEIWH 660 (873)
Q Consensus 596 e~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~h 660 (873)
.+......|.+.+.||+|+||.||+|+..+|+.||+|+++....... .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34445566778899999999999999888899999999864322110 12466899999999998
Q ss_pred CceeeEEeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeee
Q 039344 661 RNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLL 740 (873)
Q Consensus 661 ~niv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill 740 (873)
| +++.+++. .+..++||||+++++|.+ +.. .....++.|++.|++|||+. +|+||||||+||++
T Consensus 163 -~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 -G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp -T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred -C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 4 66666554 356799999999999987 421 23457999999999999999 99999999999999
Q ss_pred CCCCCeEEeccccccccCCCCCCccccccccccccccccc
Q 039344 741 DFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAY 780 (873)
Q Consensus 741 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~ 780 (873)
+ ++.+||+|||+|+. +..|+|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE-------------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE-------------CCCCCHHHHHH
Confidence 9 99999999999963 33478899864
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1e-20 Score=189.60 Aligned_cols=178 Identities=25% Similarity=0.284 Sum_probs=93.4
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTN 103 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (873)
+.++.++++++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45566666665 344333 245666666666666544455556666666666666666444445555566666666666
Q ss_pred ccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCc
Q 039344 104 SLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPP 183 (873)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 183 (873)
++++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|+++++.+..|..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 5554444445555555555555555554444445555555555555555554444445555555555555554331
Q ss_pred cccCCCCCcEEeccCCCCcccCCccccC
Q 039344 184 SLGNLSNLATLYLDTNSLSYSIPSELGN 211 (873)
Q Consensus 184 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 211 (873)
.+++|+.|+++.|.+++.+|..++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCcc
Confidence 2234444444444444444444443
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=2.1e-20 Score=187.34 Aligned_cols=177 Identities=26% Similarity=0.303 Sum_probs=93.2
Q ss_pred ceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccccc
Q 039344 48 ATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNN 127 (873)
Q Consensus 48 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 127 (873)
+.++++++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|+++...+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45666666666 444433 245666666666666555555666666666666666666444444555555556655555
Q ss_pred ccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCc
Q 039344 128 ILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPS 207 (873)
Q Consensus 128 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 207 (873)
.+++..+..|..+++|++|++++|+++.+.+..|..+++|++|+|++|++++..+..+..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 5554444445555555555555555555444445555555555555555554444444444455555555443331
Q ss_pred cccCCCCCCEEEccCcccCCCcccccC
Q 039344 208 ELGNLRSLSNLSLGYNKLSGSIPISMG 234 (873)
Q Consensus 208 ~~~~l~~L~~L~L~~N~l~~~~~~~~~ 234 (873)
.+++|++|+++.|++++.+|..++
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCc
Confidence 223444444444444444444433
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=3.9e-21 Score=219.73 Aligned_cols=183 Identities=27% Similarity=0.314 Sum_probs=91.1
Q ss_pred CCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccc
Q 039344 46 NLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLN 125 (873)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (873)
+|++|+|++|++++ +|..+. ++|++|+|++|.++ .+| ..+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 66666666666663 444442 55666666666666 344 334566666666666664 444 433 56666666
Q ss_pred ccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccC
Q 039344 126 NNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSI 205 (873)
Q Consensus 126 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 205 (873)
+|.+++ +|. .+++|+.|+|++|++++++. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|.|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 666553 333 34555555555555554322 34455555555555553 333 33 45555555555555 33
Q ss_pred CccccCCCCC-------CEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchh
Q 039344 206 PSELGNLRSL-------SNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYE 256 (873)
Q Consensus 206 ~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 256 (873)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 33 322 33 44444444444 23333333444444444444444433333
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=3.9e-20 Score=195.38 Aligned_cols=186 Identities=28% Similarity=0.452 Sum_probs=85.4
Q ss_pred EEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccc
Q 039344 25 DLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNS 104 (873)
Q Consensus 25 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 104 (873)
.+.+..+.++...+ +..+++|++|++++|.++ .++ .+..+++|++|+|++|++++..+ +..+++|++|++++|+
T Consensus 28 ~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 33444444442222 334555555555555555 222 24555555555555555553322 5555555555555555
Q ss_pred cCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCcc
Q 039344 105 LSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPS 184 (873)
Q Consensus 105 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 184 (873)
+++ + ..+..+++|++|++++|.+++. ..+..+++|+.|++++|+++++ ..+..+++|++|++++|++++..+
T Consensus 102 l~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 102 VKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CCC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--
Confidence 542 1 2244455555555555555421 2344445555555555544433 234444444444444444443222
Q ss_pred ccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccC
Q 039344 185 LGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLS 226 (873)
Q Consensus 185 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 226 (873)
+..+++|++|++++|.++. ++ .+..+++|+.|++++|++.
T Consensus 174 l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 4444444444444444442 11 2444444444444444443
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=7.7e-20 Score=209.01 Aligned_cols=188 Identities=28% Similarity=0.363 Sum_probs=161.0
Q ss_pred CCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecc
Q 039344 22 SLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLD 101 (873)
Q Consensus 22 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (873)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|++++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999996 776553 89999999999999 677 457999999999999996 666 765 99999999
Q ss_pred ccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCC
Q 039344 102 TNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSI 181 (873)
Q Consensus 102 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 181 (873)
+|++++ +|. .+++|++|+|++|.|++ +|. .+++|++|+|++|++++++. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCC-ch
Confidence 999996 666 68999999999999995 665 57899999999999998554 65 89999999999999 55
Q ss_pred CccccCCCCC-------cEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCC
Q 039344 182 PPSLGNLSNL-------ATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLS 237 (873)
Q Consensus 182 ~~~~~~l~~L-------~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 237 (873)
|. +.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|++++..|..+..++
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 55 554 77 99999999999 5788788899999999999999988887776544
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=5.6e-20 Score=194.15 Aligned_cols=171 Identities=27% Similarity=0.367 Sum_probs=80.4
Q ss_pred cCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCE
Q 039344 138 GNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSN 217 (873)
Q Consensus 138 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 217 (873)
..+++|+.|++++|.+..+ ..+..+++|++|+|++|++++..+ +..+++|++|++++|.+++ ++ .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3444455555555554433 124444555555555555543322 4445555555555555542 11 2455555555
Q ss_pred EEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccc
Q 039344 218 LSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLT 297 (873)
Q Consensus 218 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~ 297 (873)
|++++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++.+..+ +..+++|+.|++++|.++
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCC
Confidence 55555555432 2344455555555555555433 334445555555555555544332 444444555555444444
Q ss_pred cccccccccCCCccEEeccCcccc
Q 039344 298 GNISESFYIYPNLTYIDLSQNNFY 321 (873)
Q Consensus 298 ~~~~~~~~~~~~L~~L~Ls~N~l~ 321 (873)
++. .+..+++|+.|++++|++.
T Consensus 192 ~l~--~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 192 DLR--ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp BCG--GGTTCTTCSEEEEEEEEEE
T ss_pred CCh--hhccCCCCCEEECcCCccc
Confidence 332 2344444444444444443
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.1e-19 Score=210.20 Aligned_cols=192 Identities=27% Similarity=0.377 Sum_probs=106.0
Q ss_pred ccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEE
Q 039344 92 LSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQ 171 (873)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (873)
+.++..+.+..+.+.... .+..+++|+.|++++|.+.. ++ .|..+++|+.|+|++|++.++.+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCccccc--chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 344555555555555322 24456666666666666652 33 36666666666666666665444 56666666666
Q ss_pred ccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCC
Q 039344 172 LSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSG 251 (873)
Q Consensus 172 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 251 (873)
|++|.+++. +.+..+++|+.|+|++|.++.. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++
T Consensus 94 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 666666532 2455666666666666666532 2355566666666666666543 345555555555555555554
Q ss_pred CCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCccccc
Q 039344 252 AIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTG 298 (873)
Q Consensus 252 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~ 298 (873)
..| +..+++|+.|+|++|++.+. +.+..+++|+.|+|++|.+++
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEEC
T ss_pred chh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcC
Confidence 433 55555555555555555443 234444444444444444443
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.7e-19 Score=208.58 Aligned_cols=199 Identities=24% Similarity=0.323 Sum_probs=163.3
Q ss_pred CcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEe
Q 039344 116 LRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLY 195 (873)
Q Consensus 116 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 195 (873)
+.++..+.++.+.+....+ +..+++|+.|++++|.+..+. .+..+++|+.|+|++|.+++..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 4567778888888875433 678899999999999998753 58889999999999999986544 88999999999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcC
Q 039344 196 LDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRG 275 (873)
Q Consensus 196 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 275 (873)
|++|.+++ ++ .+..+++|++|+|++|+|.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 99999984 33 688999999999999999854 4588899999999999999865 578889999999999999887
Q ss_pred cCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCC
Q 039344 276 PIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWG 329 (873)
Q Consensus 276 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 329 (873)
..+ +..+++|+.|+|++|.|+++ ..+..+++|+.|+|++|.+.+.....+.
T Consensus 168 ~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 168 IVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred chh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 655 88888899999999988876 3577888888888888888754444333
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=8.4e-20 Score=199.47 Aligned_cols=176 Identities=24% Similarity=0.276 Sum_probs=100.7
Q ss_pred ceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccc-cccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 48 ATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLG-NLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 48 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
+.+++++++++ .+|..+. +.+++|+|++|+|++..+..|. ++++|++|+|++|+|+.+.+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 34555555555 3444332 2355555555555544444454 555555555555555544445555555555555555
Q ss_pred cccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccc---cCCCCCcEEeccCCCCcc
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSL---GNLSNLATLYLDTNSLSY 203 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~---~~l~~L~~L~L~~n~l~~ 203 (873)
|+|+...+..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++|+|+...+..| ..+++|+.|+|++|.|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 55554444555666666666666666665555666666666666666666664443444 446677777777777765
Q ss_pred cCCccccCCCC--CCEEEccCcccC
Q 039344 204 SIPSELGNLRS--LSNLSLGYNKLS 226 (873)
Q Consensus 204 ~~~~~~~~l~~--L~~L~L~~N~l~ 226 (873)
..+..+..++. ++.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44455666665 367777777776
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3e-19 Score=180.14 Aligned_cols=152 Identities=25% Similarity=0.390 Sum_probs=87.2
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTN 103 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (873)
+.+++++++++ .+|..+. ++|++|+|++|+++++.+..|..+++|++|+|++|++++..|.+|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 4454443 55666666666666555556666666666666666666555666666666666666666
Q ss_pred ccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCc
Q 039344 104 SLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 178 (873)
+++.+.+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666444444555555555555555555544555555555555555555555554444555555555555555443
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=4.4e-19 Score=178.93 Aligned_cols=152 Identities=26% Similarity=0.357 Sum_probs=81.9
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCC-CCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIP-GEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDT 102 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 102 (873)
+.+++++|+++ .+|..+. +.+++|+|++|++++..| +.|..+++|++|+|++|+++++.+.+|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35666666665 3454443 344566666666664433 3455566666666666666555555555555555555555
Q ss_pred cccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCc
Q 039344 103 NSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 103 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 178 (873)
|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+++++.+..|..+++|++|+|++|.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 5555444444555555555555555555444455555555555555555555444444444445555555444443
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.7e-19 Score=197.12 Aligned_cols=177 Identities=27% Similarity=0.228 Sum_probs=140.4
Q ss_pred CEEEcccCCCCCCCCcccccccccceeeccccccCCCCCcccc-CCcccCcccccccccccccCccccCCCCCcEEEccC
Q 039344 72 SDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELG-NLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYS 150 (873)
Q Consensus 72 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 150 (873)
+.++++++.++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|.|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888888888 5666555 4578888888888876677776 888888888888888876677788888888888888
Q ss_pred CCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccc---cCCCCCCEEEccCcccCC
Q 039344 151 NSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSEL---GNLRSLSNLSLGYNKLSG 227 (873)
Q Consensus 151 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~ 227 (873)
|+++.+.+..|..+++|++|+|++|+|+...+..|.++++|++|+|++|.++...+..| ..+++|+.|+|++|+|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88888877788888888888888888887778888888888888888888886555555 568888888888888886
Q ss_pred CcccccCCCCC--ccEEecccccCCC
Q 039344 228 SIPISMGNLSN--LTYLNLFENSLSG 251 (873)
Q Consensus 228 ~~~~~~~~l~~--L~~L~L~~n~l~~ 251 (873)
..+..+..++. ++.|+|++|.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 66666777776 4788888888764
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=5.1e-19 Score=178.45 Aligned_cols=133 Identities=24% Similarity=0.342 Sum_probs=74.1
Q ss_pred ccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEcc
Q 039344 94 NLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLS 173 (873)
Q Consensus 94 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 173 (873)
+|+.|+|++|+|+.+.+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|+.+.+..|.++++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 44444444444443333444444555555555555544445555555555555555555555555555555566666666
Q ss_pred CCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccC
Q 039344 174 ENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLS 226 (873)
Q Consensus 174 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 226 (873)
+|+|++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 66665555555666666666666666666555555666666666666666654
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=8.1e-19 Score=176.97 Aligned_cols=133 Identities=23% Similarity=0.253 Sum_probs=74.5
Q ss_pred cceeeccccccCCCCC-ccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEcc
Q 039344 95 LATLYLDTNSLSNSIP-SELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLS 173 (873)
Q Consensus 95 L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 173 (873)
+++|+|++|++++..+ ..|.++++|++|+|++|.+++..+..|..+++|++|+|++|+++.+.+..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3444444444443322 234445555555555555554444455555555555555555555555555556666666666
Q ss_pred CCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCC
Q 039344 174 ENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSG 227 (873)
Q Consensus 174 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 227 (873)
+|+|++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+..
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 666665555566666666666666666665556666666666666666666653
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.9e-18 Score=175.52 Aligned_cols=152 Identities=26% Similarity=0.364 Sum_probs=93.9
Q ss_pred CCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccc
Q 039344 23 LSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDT 102 (873)
Q Consensus 23 l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 102 (873)
-+.++.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+++.+.+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 4554433 6666666666666666666666666666666666666655555566666666666666
Q ss_pred cccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCc
Q 039344 103 NSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 103 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 178 (873)
|++++..+..|..+++|++|+|++|.++ .+|..+..+++|+.|+|++|+++.+.+..|..+++|+.|+|++|.+.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 6666555555566666666666666666 45555666666666666666666555555555555666666555554
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=4.1e-20 Score=192.01 Aligned_cols=169 Identities=24% Similarity=0.365 Sum_probs=83.7
Q ss_pred CCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceee
Q 039344 20 LKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLY 99 (873)
Q Consensus 20 l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (873)
+.++..+++++|.+++.. .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 344555555555555322 3555555555555555555 333 45555555555555555553322 55555555555
Q ss_pred ccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCcc
Q 039344 100 LDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNG 179 (873)
Q Consensus 100 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 179 (873)
|++|++++ +|.. .. ++|++|++++|+++++ ..+..+++|++|+|++|++++
T Consensus 92 L~~N~l~~-l~~~-------------------------~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-------------------------PS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp CCSSCCSC-CTTC-------------------------CC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-------------------------cc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC
Confidence 55555553 2211 11 4444444444444432 134445555555555555543
Q ss_pred CCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCC
Q 039344 180 SIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSG 227 (873)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 227 (873)
. +.+..+++|++|++++|.+++. ..+..+++|+.|++++|++..
T Consensus 143 ~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 143 I--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp C--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred C--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 3 2344555555555555555533 345555555555555555553
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.2e-20 Score=217.23 Aligned_cols=108 Identities=25% Similarity=0.287 Sum_probs=68.7
Q ss_pred CCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecc
Q 039344 166 SLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLF 245 (873)
Q Consensus 166 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 245 (873)
.|+.|+|++|.|++ +|. ++.+++|+.|+|++|.|+ .+|..|+.+++|++|+|++|+|++ +| .+..+++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 36666666666664 343 666666666666666666 556666666666666666666664 34 56666666666666
Q ss_pred cccCCCCC-chhhcCCCCCcEEEccCCcCcCcCC
Q 039344 246 ENSLSGAI-PYEYRNLVKLTILLLGHNQFRGPIP 278 (873)
Q Consensus 246 ~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~ 278 (873)
+|+|++.. |..+..+++|+.|+|++|++++.++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 66666554 6666666666666666666665443
No 367
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=4.6e-19 Score=191.07 Aligned_cols=287 Identities=13% Similarity=0.077 Sum_probs=127.0
Q ss_pred ccccceeeccccccCCCCCccccC-CcccCcccccccccc--cccCccccCCCCCcEEEccCCCCccccccccCC-----
Q 039344 92 LSNLATLYLDTNSLSNSIPSELGN-LRSLSNLQLNNNILS--GSIPHSLGNLTNLATLYIYSNSLSASILGKIGN----- 163 (873)
Q Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----- 163 (873)
+.+++.|.++++ +....-..+.. +++|+.|||++|++. ..... .++.+..+.+..|. ++..+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccc---cCHHHhccccccc
Confidence 556667766653 22111122222 555666666666665 11111 12223444444442 33444555
Q ss_pred ---CCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcc----cCCCcccccCCC
Q 039344 164 ---LKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNK----LSGSIPISMGNL 236 (873)
Q Consensus 164 ---l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l 236 (873)
+++|+.|+|.+ .++.+.+.+|.++++|+.+++++|.+..+.+.+|.++.++..+.+..+. .......+|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 55555555555 5554445555555555555555555554555555555444444444321 111222333334
Q ss_pred CCcc-EEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEec
Q 039344 237 SNLT-YLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDL 315 (873)
Q Consensus 237 ~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L 315 (873)
.+|+ .+++....- .+..+. ..-....+++.+.+.++-...........+++|+.|+|
T Consensus 176 ~~L~~~i~~~~~~~---l~~~~~-------------------~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L 233 (329)
T 3sb4_A 176 EPLETTIQVGAMGK---LEDEIM-------------------KAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDI 233 (329)
T ss_dssp CCCEEEEEECTTCC---HHHHHH-------------------HTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEEC
T ss_pred cccceeEEecCCCc---HHHHHh-------------------hcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEEC
Confidence 4443 232222110 010000 00011223333333332111111111112445555555
Q ss_pred cCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCC-EEeccCCccCCCCCccccccccccEEEecCccccC
Q 039344 316 SQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLG-VLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSG 394 (873)
Q Consensus 316 s~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~-~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 394 (873)
++|+++.....+|..+++|+.|+|.+| ++.+.+.+|.++.+|+ .+++.+ .++...+.+|.++.+|+.+++++|+++.
T Consensus 234 ~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~ 311 (329)
T 3sb4_A 234 SKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITT 311 (329)
T ss_dssp TTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCE
T ss_pred CCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCc
Confidence 555555555555555555555555554 4444445555555555 555555 4443344455555555555555555554
Q ss_pred Cccccccccccccccc
Q 039344 395 QLSPKLGSLVQLEHLD 410 (873)
Q Consensus 395 ~~~~~~~~l~~L~~L~ 410 (873)
..+.+|.++++|+.++
T Consensus 312 I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 312 LGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECTTTTCTTCCCCEEE
T ss_pred cchhhhcCCcchhhhc
Confidence 4445555555555543
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=9e-21 Score=218.14 Aligned_cols=203 Identities=22% Similarity=0.221 Sum_probs=147.5
Q ss_pred CCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCC-------------CCCCCCcccccccccceee-ccccccCCC
Q 039344 43 NLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNK-------------LSGSIPPSLGNLSNLATLY-LDTNSLSNS 108 (873)
Q Consensus 43 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~~~~~~~l~~L~~L~-L~~n~l~~~ 108 (873)
.+++|+.|+|++|+++ .+|..++++++|+.|++++|. ..+..|..++.+++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3444555555555554 445455555555555544432 3334555556666666665 444433
Q ss_pred CCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCC
Q 039344 109 IPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNL 188 (873)
Q Consensus 109 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 188 (873)
.+|+.+.+++|.++...+ ..|+.|+|++|.+++++ . |+.+++|+.|+|++|.|+ .+|..++.+
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~lp-~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVLC-H-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSCC-C-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCCCc-C-ccccccCcEeecCccccc-ccchhhhcC
Confidence 345555666666663222 25899999999998854 3 999999999999999999 778899999
Q ss_pred CCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCc-ccccCCCCCccEEecccccCCCCCchh---hcCCCCCc
Q 039344 189 SNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSI-PISMGNLSNLTYLNLFENSLSGAIPYE---YRNLVKLT 264 (873)
Q Consensus 189 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~~L~ 264 (873)
++|+.|+|++|.+++ +| .++.+++|++|+|++|+|++.. |..+..+++|+.|+|++|.+++..+.. +..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 999999999999995 56 7999999999999999999776 899999999999999999998765532 44578888
Q ss_pred EEEc
Q 039344 265 ILLL 268 (873)
Q Consensus 265 ~L~L 268 (873)
.|++
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 8764
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=9.1e-19 Score=173.55 Aligned_cols=154 Identities=16% Similarity=0.271 Sum_probs=104.6
Q ss_pred ccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccC
Q 039344 41 LGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLS 120 (873)
Q Consensus 41 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 120 (873)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 355667777777777776 445 4666777777777777555 223666777777777777777765666777777777
Q ss_pred cccccccccccccCccccCCCCCcEEEccCCC-CccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCC
Q 039344 121 NLQLNNNILSGSIPHSLGNLTNLATLYIYSNS-LSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTN 199 (873)
Q Consensus 121 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 199 (873)
+|++++|.+++..+..|+.+++|++|++++|. ++.+. .+..+++|++|++++|.+++. + .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 77777777776566677777777777777776 65542 567777777777777777753 2 5677777777777777
Q ss_pred CCc
Q 039344 200 SLS 202 (873)
Q Consensus 200 ~l~ 202 (873)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 765
No 370
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.76 E-value=2e-17 Score=181.85 Aligned_cols=266 Identities=12% Similarity=0.088 Sum_probs=199.5
Q ss_pred CCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceee
Q 039344 20 LKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLY 99 (873)
Q Consensus 20 l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (873)
...++.+.+-+ +++.+.+.+|.++ +|+.+.+.++ ++.+...+|.+. +|+.+.+.+ .++.+.+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35677777764 4666777788875 6888888776 666777777774 688888875 66667777888888888888
Q ss_pred ccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCcc
Q 039344 100 LDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNG 179 (873)
Q Consensus 100 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 179 (873)
+..|+++.+...+|. ..+|+.+.|.++ ++.+...+|.++++|+.+++..| +..+...+|.+ .+|+.+.+ .+.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 888888865555666 578888888744 66566677888888888888764 66777777877 67888888 455665
Q ss_pred CCCccccCCCCCcEEeccCCCCc-----ccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCc
Q 039344 180 SIPPSLGNLSNLATLYLDTNSLS-----YSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIP 254 (873)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 254 (873)
+...+|.++++|+.+++.+|.+. .+.+.+|.+|++|+.+.|.+ .++.+...+|.++++|+.++|..| ++.+..
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 66778888888888888877765 46677888888888888884 476677778888888888888655 776778
Q ss_pred hhhcCCCCCcEEEccCCcCcCcC-CcCCCCC-CCCeEEccCccccc
Q 039344 255 YEYRNLVKLTILLLGHNQFRGPI-PILRNLT-SLERVRLDRNYLTG 298 (873)
Q Consensus 255 ~~~~~l~~L~~L~L~~N~l~~~~-~~l~~l~-~L~~L~L~~n~l~~ 298 (873)
.+|.++ +|+.+++++|.+.... ..|.+++ +++.|++..+.+..
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHH
T ss_pred HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHH
Confidence 888888 8888888888776633 3566664 78888888877653
No 371
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=7.3e-18 Score=171.20 Aligned_cols=133 Identities=29% Similarity=0.383 Sum_probs=60.6
Q ss_pred cccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEec
Q 039344 117 RSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYL 196 (873)
Q Consensus 117 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 196 (873)
++|++|+|++|.+++..|..|..+++|++|+|++|+++.+.+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 34444444444444433444444444444444444444444444444444444444444444433344444444444444
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCC
Q 039344 197 DTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLS 250 (873)
Q Consensus 197 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 250 (873)
++|.++ .+|..+..+++|++|+|++|+|+...+..+..+++|+.|+|++|.+.
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 444444 33444444444444444444444333334444444444444444443
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=1e-18 Score=181.42 Aligned_cols=169 Identities=22% Similarity=0.267 Sum_probs=81.5
Q ss_pred cccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEec
Q 039344 117 RSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYL 196 (873)
Q Consensus 117 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 196 (873)
.++..+++++|.+++ ++ .+..+++|++|++++|.++.+. .+..+++|++|+|++|++++..+ +..+++|++|++
T Consensus 19 ~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 344444444444442 22 3444444445555444444322 34444445555555554443322 444445555555
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCc
Q 039344 197 DTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP 276 (873)
Q Consensus 197 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 276 (873)
++|++++ ++. +.. ++|++|++++|+|++. ..+..+++|++|++++|++++. + .+..+++|+.|++++|++.+.
T Consensus 93 ~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 93 NRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 5555442 221 111 4555555555555532 1345555555555555555543 1 455555555555555555544
Q ss_pred CCcCCCCCCCCeEEccCcccccc
Q 039344 277 IPILRNLTSLERVRLDRNYLTGN 299 (873)
Q Consensus 277 ~~~l~~l~~L~~L~L~~n~l~~~ 299 (873)
..+..+++|+.|++++|.++..
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 4455555666666666655544
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.5e-18 Score=186.98 Aligned_cols=259 Identities=14% Similarity=0.060 Sum_probs=140.7
Q ss_pred CCCCCEEECCCCccc--ccCCccccCCCCCceEEccCCcccccCCCCccC--------CCCCCEEEcccCCCCCCCCccc
Q 039344 20 LKSLSDLELGNNKLS--GSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGN--------FRFFSDLELSNNKLSGSIPPSL 89 (873)
Q Consensus 20 l~~l~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~--------l~~L~~L~L~~n~l~~~~~~~~ 89 (873)
+++|+.|||++|+|. ...+..+ +.++.+.+..|. +.+.+|.+ +++|+.|+|.+ .++.+.+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 778999999999998 3333332 335555555553 34566667 88888888888 7776777788
Q ss_pred ccccccceeeccccccCCCCCccccCCcccCccccccccc----ccccCccccCCCCCc-EEEccCCCCcccccccc---
Q 039344 90 GNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNIL----SGSIPHSLGNLTNLA-TLYIYSNSLSASILGKI--- 161 (873)
Q Consensus 90 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l----~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~--- 161 (873)
.++++|+.|++.+|.+..+.+.+|.++.++..+.+..+.. .......|..+..|+ .+.+....- +....+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~--l~~~~~~~~ 198 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGK--LEDEIMKAG 198 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCC--HHHHHHHTT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCc--HHHHHhhcc
Confidence 8888888888888887767777787777777776655322 223344566666666 444432211 111111
Q ss_pred CCCCCCCEEEccCCcCccCCCccc-cCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCcc
Q 039344 162 GNLKSLSNLQLSENNFNGSIPPSL-GNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLT 240 (873)
Q Consensus 162 ~~l~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 240 (873)
....+++.+.+.++-.. .....+ ..+++|+.++|++|.++.+.+.+|.+|++|++|+|.+| ++.+.+.+|.++++|+
T Consensus 199 ~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 199 LQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp CCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 12233444444333111 000111 12445555555555555444444555555555555554 4434444555555555
Q ss_pred -EEecccccCCCCCchhhcCCCCCcEEEccCCcCcCc-CCcCCCCCCCCeEE
Q 039344 241 -YLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGP-IPILRNLTSLERVR 290 (873)
Q Consensus 241 -~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~l~~l~~L~~L~ 290 (873)
.+++.+ .++.+.+.+|.++++|+.+++++|++... ..+|.++++|+.++
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 555554 44444445555555555555555555442 22455555555544
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=3.2e-18 Score=177.14 Aligned_cols=142 Identities=16% Similarity=0.156 Sum_probs=109.1
Q ss_pred hcCCCCCceeeecCCeEEEEEEe-CCCcE--EEEEEccCCCCCc---------------------chhHHHHHHHHHHHH
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKL-ASGEI--IAVKKFHSPLPGE---------------------MTFQQEFLNEVKALT 656 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~---------------------~~~~~~~~~e~~~l~ 656 (873)
..-|++.+.||+|+||.||+|.. .+|+. ||||+++...... ......+.+|+..++
T Consensus 46 ~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 46 GYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp TSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 33467789999999999999987 67999 9999876432110 011236889999999
Q ss_pred hccCCce--eeEEeEEEecceeEEEEEeccC-C----ChhhHhcccccccCCChHHHHHHHHHHHHHHHHHH-hCCCCCe
Q 039344 657 EIWHRNI--VKVYGFCLHVRHLFIVYEYFKM-C----SLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMH-NDCFPPI 728 (873)
Q Consensus 657 ~l~h~ni--v~l~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~~~~i 728 (873)
.++|+++ +.++++ +..++||||+.+ | ++.++... .++..+..++.|++.|++||| +. +|
T Consensus 126 ~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---gi 192 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---EL 192 (258)
T ss_dssp HHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CE
T ss_pred HHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CE
Confidence 9988864 444443 357899999953 3 56555321 235567889999999999999 88 99
Q ss_pred eeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 729 VHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 729 ~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
+||||||+|||++. .++|+|||+|...
T Consensus 193 vHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 193 VHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999999998 9999999999754
No 375
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.75 E-value=5.5e-17 Score=179.42 Aligned_cols=332 Identities=11% Similarity=0.042 Sum_probs=162.3
Q ss_pred cCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccC
Q 039344 60 SIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGN 139 (873)
Q Consensus 60 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 139 (873)
+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+ +......+|.+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 33334444444444444322 33333444444444444444322 33233334444444444444332 22133334444
Q ss_pred CCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEE
Q 039344 140 LTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLS 219 (873)
Q Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 219 (873)
+..++..... .+..+...+|.++++|+.+.+..+.. ......|.++.+|+.+.+..+ ++.+...+|.++..|+.+.
T Consensus 139 ~~~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 139 CDFKEITIPE--GVTVIGDEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp CCCSEEECCT--TCCEECTTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCC
T ss_pred ccccccccCc--cccccchhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceee
Confidence 3322222111 12223344455555555555543322 233444555555555555444 3334444555555555555
Q ss_pred ccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccc
Q 039344 220 LGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGN 299 (873)
Q Consensus 220 L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~ 299 (873)
+..+... . ........+|+.+.+..+ ++.+....|..+..|+.+.+..+........+..+..++.+....+. +
T Consensus 215 ~~~~~~~-i-~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~---i 288 (394)
T 4fs7_A 215 FPNSLYY-L-GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVI---V 288 (394)
T ss_dssp CCTTCCE-E-CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSE---E
T ss_pred cCCCceE-e-ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCcee---e
Confidence 5444322 1 122223345555555432 23244445555666666666555444444455556666665555443 2
Q ss_pred cccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCcccccc
Q 039344 300 ISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKL 379 (873)
Q Consensus 300 ~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l 379 (873)
....|....+|+.+.+.++ +..+...+|..+.+|+.++|..+ ++.+...+|.++.+|+.+++..| ++.....+|.++
T Consensus 289 ~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C 365 (394)
T 4fs7_A 289 PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGC 365 (394)
T ss_dssp CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTC
T ss_pred ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCC
Confidence 3445666666666666544 44455666666667777766533 55555566666777777777655 544445566677
Q ss_pred ccccEEEecCccccCCcccccccccccccc
Q 039344 380 NFFIKLVLAHNQLSGQLSPKLGSLVQLEHL 409 (873)
Q Consensus 380 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 409 (873)
.+|+.+++..+ ++ ....+|.++.+|+.+
T Consensus 366 ~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 366 INLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 77777777654 22 123456666666653
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.6e-18 Score=170.29 Aligned_cols=155 Identities=19% Similarity=0.272 Sum_probs=128.8
Q ss_pred ccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCc
Q 039344 65 IGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLA 144 (873)
Q Consensus 65 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 144 (873)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..+..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 367788999999999998 455 6888999999999999776 345788899999999999999877788899999999
Q ss_pred EEEccCCCCccccccccCCCCCCCEEEccCCc-CccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 039344 145 TLYIYSNSLSASILGKIGNLKSLSNLQLSENN-FNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYN 223 (873)
Q Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 223 (873)
+|++++|++++..+..+..+++|++|++++|. ++. ++ .+..+++|++|++++|.+++ .+ .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 99999999988778888999999999999998 664 34 68889999999999999985 33 6888999999999999
Q ss_pred ccCC
Q 039344 224 KLSG 227 (873)
Q Consensus 224 ~l~~ 227 (873)
+|.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 8863
No 377
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=5.8e-17 Score=178.22 Aligned_cols=263 Identities=11% Similarity=0.124 Sum_probs=140.6
Q ss_pred CCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEc
Q 039344 69 RFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYI 148 (873)
Q Consensus 69 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 148 (873)
..++.+.+.+ .++.+...+|.++ +|+.+.+..+ ++.+...+|.++ +|+.+.+.+ .++.....+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 3444444443 2333444455543 4555555443 443444445442 455555543 344344445555555555555
Q ss_pred cCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCC
Q 039344 149 YSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGS 228 (873)
Q Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 228 (873)
++|.+..+...+|. +.+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+. +.++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEE
Confidence 55555555555554 345555555532 44444455555555555555543 33344445554 455555552 334434
Q ss_pred cccccCCCCCccEEecccccCC-----CCCchhhcCCCCCcEEEccCCcCcC-cCCcCCCCCCCCeEEccCccccccccc
Q 039344 229 IPISMGNLSNLTYLNLFENSLS-----GAIPYEYRNLVKLTILLLGHNQFRG-PIPILRNLTSLERVRLDRNYLTGNISE 302 (873)
Q Consensus 229 ~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~ 302 (873)
...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+++.++ +.. ...+|.++++|+.+.|..| ++.+...
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~-i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPES-IRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCCc-eEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 4455555555555555555443 345556666666666666633 333 3345666666666666443 5566666
Q ss_pred ccccCCCccEEeccCccccccCCCCCCCCC-CCCeeeeccccC
Q 039344 303 SFYIYPNLTYIDLSQNNFYGEISSDWGRCP-KLSTLDFSINNI 344 (873)
Q Consensus 303 ~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~i 344 (873)
+|..+ +|+.|++++|.+.......|..++ +++.|.+..+.+
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 77776 777777777776666666666663 567777766654
No 378
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.74 E-value=5e-17 Score=179.78 Aligned_cols=336 Identities=10% Similarity=0.033 Sum_probs=262.7
Q ss_pred cccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCc
Q 039344 32 KLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPS 111 (873)
Q Consensus 32 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 111 (873)
.++.+...+|.++.+|+.+.|.+ .++.+...+|.++.+|+.+++.++ ++.+...+|.++.+|+.+.+..+ +..+...
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 46778888999999999999975 477677889999999999999865 66577889999999999887654 5546667
Q ss_pred cccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCC
Q 039344 112 ELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNL 191 (873)
Q Consensus 112 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 191 (873)
+|.++..++....... ......+|.++++|+.+.+..+ +..+...+|.++.+|+.+++..| ++.+...+|.++..|
T Consensus 135 aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccCccc--cccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 7887765444433332 2244567999999999999765 45677888999999999999876 555667788899999
Q ss_pred cEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCC
Q 039344 192 ATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHN 271 (873)
Q Consensus 192 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 271 (873)
+.+.+..+... . ...+....+|+.+.+..+. +.+....+.++..|+.+.+..+... +....|..+..++.+....+
T Consensus 211 ~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~ 286 (394)
T 4fs7_A 211 ENMEFPNSLYY-L-GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSV 286 (394)
T ss_dssp CBCCCCTTCCE-E-CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSS
T ss_pred ceeecCCCceE-e-ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCce
Confidence 99988877654 2 3344456789999887653 3355677888999999999877554 67778899999999988776
Q ss_pred cCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCcc
Q 039344 272 QFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPE 351 (873)
Q Consensus 272 ~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~ 351 (873)
.+. ...+..+.+|+.+.+.++ ++.+...+|..+.+|+.+++.++ ++.....+|..|++|+.+++..+ ++.+...+
T Consensus 287 ~i~--~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a 361 (394)
T 4fs7_A 287 IVP--EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANA 361 (394)
T ss_dssp EEC--TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred eec--cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHH
Confidence 543 346788899999999765 77788899999999999999754 77778899999999999999876 77777889
Q ss_pred ccCCCCCCEEeccCCccCCCCCccccccccccEE
Q 039344 352 IGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKL 385 (873)
Q Consensus 352 ~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 385 (873)
|.++.+|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 362 F~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 362 FQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp BTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred hhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 999999999999765 33 345678888887764
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=9.9e-19 Score=207.64 Aligned_cols=229 Identities=23% Similarity=0.225 Sum_probs=120.1
Q ss_pred CCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEecc
Q 039344 237 SNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLS 316 (873)
Q Consensus 237 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls 316 (873)
+.++.|+|.+|.+... +. ..|+.++|+.|.+.+ +++..|.+. +.+..|..++.|+.|+|+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls 232 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYSIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLS 232 (727)
T ss_dssp ---------------------------------------------------------------------CCCCCCEEECT
T ss_pred CccceEEeeCCCCCcc-hh-----hHhhcCccCcccccC-------------cccccccee-cChhhhccCCCCcEEECC
Confidence 4566777777776642 21 234445555554432 233445444 556677788888888888
Q ss_pred CccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCc
Q 039344 317 QNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQL 396 (873)
Q Consensus 317 ~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 396 (873)
+|.+. .++..+..+++|+.|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..+..+.+|+.|+|++|.|+ .+
T Consensus 233 ~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~l 308 (727)
T 4b8c_D 233 NLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TL 308 (727)
T ss_dssp TSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CC
T ss_pred CCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-cc
Confidence 88887 56666668889999999999988 78888888999999999999988 77888889999999999999887 56
Q ss_pred ccccccccccccccccccccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCc--------cccC
Q 039344 397 SPKLGSLVQLEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHN--------SLSG 468 (873)
Q Consensus 397 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N--------~l~~ 468 (873)
|..|+.+++|+.|+|++|.|++.+|..+..+.. .+..|+|++|.+++.+|. .|+.|++++| .|++
T Consensus 309 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 309 PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV-TGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH-HHHHHHHHHCCCCCCCCC------C---------------------
T ss_pred ChhhhcCCCccEEeCCCCccCCCChHHHhhcch-hhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccc
Confidence 777889999999999999998888887766532 334578899999887775 4566677777 5555
Q ss_pred CCchhhhccCCCcEEecCCCcccccCCC
Q 039344 469 LIPSCFEKMNGLLHIDISYNELRGSIPN 496 (873)
Q Consensus 469 ~~~~~~~~~~~L~~l~ls~N~l~~~~p~ 496 (873)
..+..+..+..+....+++|-+.+....
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~~~~~~ 409 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLCQHYAT 409 (727)
T ss_dssp --------------------CCCGGGCC
T ss_pred cccchhhcccccceeeeeccccccccCc
Confidence 5666666777778888888887754433
No 380
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=3.8e-18 Score=202.64 Aligned_cols=223 Identities=20% Similarity=0.156 Sum_probs=111.0
Q ss_pred CCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEcc
Q 039344 213 RSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLD 292 (873)
Q Consensus 213 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~ 292 (873)
+.++.|+|.+|.+... +. ..|+.++|+.|.|.+ +++..|.+......+..+++|+.|+|+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~~~~~~~~~l~~L~~L~Ls 232 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYSIDE--------------DDDIENRMVMPKDSKYDDQLWHALDLS 232 (727)
T ss_dssp ---------------------------------------------------------------------CCCCCCEEECT
T ss_pred CccceEEeeCCCCCcc-hh-----hHhhcCccCcccccC--------------ccccccceecChhhhccCCCCcEEECC
Confidence 5688899999998852 32 345666677766553 244455555555566777777777777
Q ss_pred CcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEeccCCccCCCC
Q 039344 293 RNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEI 372 (873)
Q Consensus 293 ~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~ 372 (873)
+|.+..++...+ .+++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+
T Consensus 233 ~n~l~~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~l 308 (727)
T 4b8c_D 233 NLQIFNISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TL 308 (727)
T ss_dssp TSCCSCCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CC
T ss_pred CCCCCCCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-cc
Confidence 777775554443 7788888888888887 67777888888888888888888 67888888888888888888887 67
Q ss_pred CccccccccccEEEecCccccCCcccccccccc-cccccccccccccccCCCcCchhhhhhhcccccCC--------ccC
Q 039344 373 PIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQ-LEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRN--------FLR 443 (873)
Q Consensus 373 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N--------~l~ 443 (873)
|..+..+.+|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..+. .|++++| .+.
T Consensus 309 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~--------~l~l~~n~~~~~~~~~l~ 380 (727)
T 4b8c_D 309 PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR--------FIEINTDGEPQREYDSLQ 380 (727)
T ss_dssp CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------------
T ss_pred ChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc--------eeEeecccccccccCCcc
Confidence 777888888888888888888877777765432 34588999999888887554 4455555 455
Q ss_pred cccchhhhhhcccceecccCcccc
Q 039344 444 EAIPSQICIMQSLEKLNLSHNSLS 467 (873)
Q Consensus 444 ~~~~~~~~~l~~L~~L~L~~N~l~ 467 (873)
+..+..+..+..++...++.|-+.
T Consensus 381 ~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 381 QSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---------------------CCC
T ss_pred ccccchhhcccccceeeeeccccc
Confidence 555555666777778888888775
No 381
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=9.1e-18 Score=165.38 Aligned_cols=131 Identities=24% Similarity=0.331 Sum_probs=78.1
Q ss_pred CeeeeccccCCccCCccccCCCCCCEEeccCCccCCCCCc-cccccccccEEEecCccccCCcccccccccccccccccc
Q 039344 335 STLDFSINNITGNVPPEIGHSSQLGVLDLSSNHIVGEIPI-ELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQLEHLDLSS 413 (873)
Q Consensus 335 ~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 413 (873)
+.+++++|+++ .+|..+.. +|++|+|++|.|++..+. .+..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 45554432 667777777777644443 356666666666666666665566666666666666666
Q ss_pred cccccccCCCcCchhhhhhhcccccCCccCcccchhhhhhcccceecccCccccCCC
Q 039344 414 NRLSNSIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQSLEKLNLSHNSLSGLI 470 (873)
Q Consensus 414 N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 470 (873)
|+|++..+..|..+. +|++|+|++|+|++..|..+..+++|+.|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLH--QLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCT--TCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCC--CCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 666655555555543 5555555555555555555555555555555555555443
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.4e-16 Score=153.32 Aligned_cols=131 Identities=25% Similarity=0.270 Sum_probs=64.3
Q ss_pred CCCCEEECCCCccc-ccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceee
Q 039344 21 KSLSDLELGNNKLS-GSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLY 99 (873)
Q Consensus 21 ~~l~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (873)
++|++|+|++|+++ +.+|..|..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45555555555555 44555555555555555555555533 4455555555555555555544444444455555555
Q ss_pred ccccccCCCC-CccccCCcccCcccccccccccccC---ccccCCCCCcEEEccCCCC
Q 039344 100 LDTNSLSNSI-PSELGNLRSLSNLQLNNNILSGSIP---HSLGNLTNLATLYIYSNSL 153 (873)
Q Consensus 100 L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~n~l 153 (873)
|++|++++.. +..+..+++|++|++++|.+++..+ ..|..+++|++|++++|.+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 5555554321 1344444444444444444442222 2344444444444444443
No 383
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=6.4e-16 Score=152.10 Aligned_cols=109 Identities=24% Similarity=0.265 Sum_probs=53.1
Q ss_pred CCCeEEccCccccccccc-ccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEec
Q 039344 285 SLERVRLDRNYLTGNISE-SFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDL 363 (873)
Q Consensus 285 ~L~~L~L~~n~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~L 363 (873)
+|++|++++|.++++.+. .|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|+.+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 444444444444444332 2444455555555555555444455555555555555555555444444445555555555
Q ss_pred cCCccCCCCCccccccccccEEEecCcccc
Q 039344 364 SSNHIVGEIPIELGKLNFFIKLVLAHNQLS 393 (873)
Q Consensus 364 s~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 393 (873)
++|+|++..|..+..+++|+.|+|++|.++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 555554444444444444444444444444
No 384
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=3.7e-16 Score=150.41 Aligned_cols=131 Identities=24% Similarity=0.222 Sum_probs=56.2
Q ss_pred CCCEEEcccCCCC-CCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEc
Q 039344 70 FFSDLELSNNKLS-GSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYI 148 (873)
Q Consensus 70 ~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 148 (873)
+|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444443 23333344444444444444444422 33444444444444444444333443444444444444
Q ss_pred cCCCCccccc-cccCCCCCCCEEEccCCcCccCCC---ccccCCCCCcEEeccCCCCc
Q 039344 149 YSNSLSASIL-GKIGNLKSLSNLQLSENNFNGSIP---PSLGNLSNLATLYLDTNSLS 202 (873)
Q Consensus 149 ~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~---~~~~~l~~L~~L~L~~n~l~ 202 (873)
++|+++++.. ..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 4444443321 344444444444444444443322 23444444444444444444
No 385
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=2.8e-16 Score=168.02 Aligned_cols=144 Identities=10% Similarity=0.134 Sum_probs=103.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCC------cc-----hhHH--------HHHHHHHHHHhccCC
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPG------EM-----TFQQ--------EFLNEVKALTEIWHR 661 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~-----~~~~--------~~~~e~~~l~~l~h~ 661 (873)
..-|++.++||+|+||.||+|...+|+.||||+++..... .. .... ....|...+.++.+.
T Consensus 94 g~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 94 KDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp TSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 3448889999999999999999999999999987642110 00 0001 123466667777655
Q ss_pred ceeeEEeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeC
Q 039344 662 NIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLD 741 (873)
Q Consensus 662 niv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~ 741 (873)
++.-..-+.. ...++||||++++++..+.. ......++.|++.++.|||+. |||||||||.|||++
T Consensus 174 gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 174 GFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp TCSCCCEEEE--ETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCCCeeeec--cCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 5432222211 23479999999988865532 223456889999999999999 999999999999999
Q ss_pred CCCC----------eEEeccccccccC
Q 039344 742 FENE----------AHVSDFGIAKFLK 758 (873)
Q Consensus 742 ~~~~----------~kl~Dfg~a~~~~ 758 (873)
+++. +.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 8773 8999999886543
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=9e-16 Score=150.98 Aligned_cols=108 Identities=26% Similarity=0.370 Sum_probs=53.3
Q ss_pred CCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEcc
Q 039344 70 FFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIY 149 (873)
Q Consensus 70 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 149 (873)
+|++|+|++|.++ .+|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|.|++..+..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444444 333444444444444444444444444444444444444444455444444445555555555555
Q ss_pred CCCCccccccccCCCCCCCEEEccCCcCc
Q 039344 150 SNSLSASILGKIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 178 (873)
+|+++.+.+..|..+++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 55555544445555555555555555554
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=1.4e-15 Score=149.69 Aligned_cols=125 Identities=29% Similarity=0.447 Sum_probs=59.4
Q ss_pred EEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccc
Q 039344 25 DLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNS 104 (873)
Q Consensus 25 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 104 (873)
.+++++|+++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|+|++|.|++..+.+|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4445555544 3333322 34455555555554 344444445555555555555544444445555555555555555
Q ss_pred cCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCC
Q 039344 105 LSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSL 153 (873)
Q Consensus 105 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 153 (873)
++++.|..|.++++|++|+|++|.++...+..|..+++|+.|+|++|.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 5444444444455555555555555433333444445555555555444
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=2.6e-16 Score=148.12 Aligned_cols=126 Identities=22% Similarity=0.269 Sum_probs=61.7
Q ss_pred CCCCEEECCCCccc-ccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceee
Q 039344 21 KSLSDLELGNNKLS-GSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLY 99 (873)
Q Consensus 21 ~~l~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (873)
++|++|++++|+++ +.+|..|..+++|++|++++|++++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34555555555555 44555555555555555555555533 4455555555555555555544444444455555555
Q ss_pred ccccccCCC-CCccccCCcccCcccccccccccccC---ccccCCCCCcEEEc
Q 039344 100 LDTNSLSNS-IPSELGNLRSLSNLQLNNNILSGSIP---HSLGNLTNLATLYI 148 (873)
Q Consensus 100 L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L 148 (873)
+++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 555555431 12344444444444444444443222 23444444444443
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=3.9e-16 Score=146.89 Aligned_cols=127 Identities=20% Similarity=0.245 Sum_probs=81.1
Q ss_pred CCCceEEccCCccc-ccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccc
Q 039344 45 TNLATLYIHTNSLS-GSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQ 123 (873)
Q Consensus 45 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (873)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 66777777777776 56666777777777777777777744 5666677777777777777655566566666666666
Q ss_pred ccccccccc-cCccccCCCCCcEEEccCCCCccccc---cccCCCCCCCEEEcc
Q 039344 124 LNNNILSGS-IPHSLGNLTNLATLYIYSNSLSASIL---GKIGNLKSLSNLQLS 173 (873)
Q Consensus 124 L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~ 173 (873)
+++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666642 22555666666666666666655443 345555555555554
No 390
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.62 E-value=3.3e-14 Score=157.07 Aligned_cols=319 Identities=10% Similarity=0.120 Sum_probs=173.7
Q ss_pred CCCccCCC-CCCEEEcccCCCCCCCCcccccccccceeeccccc---cCCCCCccccCCcccCcccccccccccccCccc
Q 039344 62 PGEIGNFR-FFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNS---LSNSIPSELGNLRSLSNLQLNNNILSGSIPHSL 137 (873)
Q Consensus 62 p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 137 (873)
..+|.+.. .|+.+.+..+ ++.+...+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+.++ ++.....+|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 33444432 2444444432 333444444444445544444432 33333444555555555554433 222333445
Q ss_pred cCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCE
Q 039344 138 GNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSN 217 (873)
Q Consensus 138 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 217 (873)
..+.+|+.+.+..+ +..+...+|..+.+|+.+.+..+ ++.+...+|.. ..|+.+.+..+... ....+|..+.++..
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccce
Confidence 55555555555432 33444455555555555555433 22233333432 34555555444332 44445555555555
Q ss_pred EEccCcccCCCccc-------------ccCCCCCccEEecccccCCCCCchhhcCCCCCcEEEccCCcCcCcCCcCCCCC
Q 039344 218 LSLGYNKLSGSIPI-------------SMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTILLLGHNQFRGPIPILRNLT 284 (873)
Q Consensus 218 L~L~~N~l~~~~~~-------------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~ 284 (873)
.....+........ .+.....+..+.+. +.++.+...+|.++..|+.+.+.++.......+|.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~ 288 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCP 288 (394)
T ss_dssp EEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCT
T ss_pred ecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccceecCccccccc
Confidence 55444433211100 11122233344433 23444556778888888888887776655566788888
Q ss_pred CCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCccCCccccCCCCCCEEecc
Q 039344 285 SLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITGNVPPEIGHSSQLGVLDLS 364 (873)
Q Consensus 285 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls 364 (873)
+|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|..|.+|+.+.+..+ ++.+...+|.++++|+.+++.
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~ 365 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYS 365 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEES
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEEC
Confidence 88888885 5577788888888888888888754 66677788888888998888654 666667788888899999888
Q ss_pred CCccCCCCCccccccccccEEEecCcccc
Q 039344 365 SNHIVGEIPIELGKLNFFIKLVLAHNQLS 393 (873)
Q Consensus 365 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 393 (873)
+|.... ..+....+|+.+.+..|.+.
T Consensus 366 ~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 366 GSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp SCHHHH---HTCBCCCCC-----------
T ss_pred Cceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 876541 35666777888877766543
No 391
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.61 E-value=5e-14 Score=155.65 Aligned_cols=322 Identities=12% Similarity=0.106 Sum_probs=137.8
Q ss_pred ccccCCccccCCC-CCceEEccCCcccccCCCCccCCCCCCEEEcccCC---CCCCCCcccccccccceeeccccccCCC
Q 039344 33 LSGSIPHSLGNLT-NLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNK---LSGSIPPSLGNLSNLATLYLDTNSLSNS 108 (873)
Q Consensus 33 l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 108 (873)
++.+...+|.+++ .|+.+.+-++ ++.+...+|.++.+|+.+.+.+|. ++.+...+|.++.+|+.+.+..+ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 3334444555543 3555555432 444445555555555555555442 33344445555555555544332 3323
Q ss_pred CCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccCCCccccCC
Q 039344 109 IPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGSIPPSLGNL 188 (873)
Q Consensus 109 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 188 (873)
...+|.++.+|+.+.+..+. .......|..+.+|+.+.+..+ +..+...+|.. .+|+.+.+..+-.. ....+|..+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c 204 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSEC 204 (394)
T ss_dssp CTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTC
T ss_pred hhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhc
Confidence 34445555555555554332 2233344555555555555433 33344444433 34555555433222 333445555
Q ss_pred CCCcEEeccCCCCcccCCcc-------------ccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCch
Q 039344 189 SNLATLYLDTNSLSYSIPSE-------------LGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPY 255 (873)
Q Consensus 189 ~~L~~L~L~~n~l~~~~~~~-------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 255 (873)
..++......+......... +.....+..+.+..+ ++.+...+|.++.+|+.+.+..+... +...
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~ 282 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VARIETHAFDSCAYLASVKMPDSVVS-IGTG 282 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EEEECTTTTTTCSSCCEEECCTTCCE-ECTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCCc-ceEcccceeeecccccEEecccccce-ecCc
Confidence 55555544443332111000 011122233333221 22233344555555555555433322 4444
Q ss_pred hhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCC
Q 039344 256 EYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLS 335 (873)
Q Consensus 256 ~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 335 (873)
+|.++.+|+.+.+..+--.-...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.....+|..|++|+
T Consensus 283 aF~~c~~L~~i~l~~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 283 AFMNCPALQDIEFSSRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALN 360 (394)
T ss_dssp TTTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCC
T ss_pred ccccccccccccCCCcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCC
Confidence 455555555555542221112334555555555555432 44444555555555555555432 4434445555555555
Q ss_pred eeeeccccCCccCCccccCCCCCCEEeccCCc
Q 039344 336 TLDFSINNITGNVPPEIGHSSQLGVLDLSSNH 367 (873)
Q Consensus 336 ~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~ 367 (873)
.+++.++.... ..+..+..|+.+.+..|.
T Consensus 361 ~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 361 NIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp EEEESSCHHHH---HTCBCCCCC---------
T ss_pred EEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 55555543321 234444455555544443
No 392
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=6.8e-15 Score=142.81 Aligned_cols=39 Identities=31% Similarity=0.347 Sum_probs=14.3
Q ss_pred cCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCc
Q 039344 138 GNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENN 176 (873)
Q Consensus 138 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 176 (873)
..+++|++|++++|+++.+.+..|..+++|++|+|++|.
T Consensus 97 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 135 (177)
T 2o6r_A 97 DKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 135 (177)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred hCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCC
Confidence 333333333333333333333333333333333333333
No 393
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=6.2e-15 Score=143.11 Aligned_cols=131 Identities=22% Similarity=0.347 Sum_probs=108.7
Q ss_pred CCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccc
Q 039344 23 LSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDT 102 (873)
Q Consensus 23 l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 102 (873)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888999887 5555443 6889999999999877777788889999999999999877777788899999999999
Q ss_pred cccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCccc
Q 039344 103 NSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSAS 156 (873)
Q Consensus 103 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 156 (873)
|++++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|.+...
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 999877777788889999999999999866666678889999999999988753
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=2.3e-15 Score=145.98 Aligned_cols=109 Identities=22% Similarity=0.236 Sum_probs=46.1
Q ss_pred cCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccce
Q 039344 18 RNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLAT 97 (873)
Q Consensus 18 ~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 97 (873)
.+..+|++|+|++|+++. +|......++|++|+|++|++++. ..|..+++|++|+|++|++++..+..|..+++|++
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 334445555555555442 232212122445555555544432 34444444444444444444332233344444444
Q ss_pred eeccccccCCCCCc--cccCCcccCcccccccccc
Q 039344 98 LYLDTNSLSNSIPS--ELGNLRSLSNLQLNNNILS 130 (873)
Q Consensus 98 L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~ 130 (873)
|+|++|+++ .+|. .+..+++|++|++++|.++
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 444444443 2222 3344444444444444443
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=1.2e-16 Score=158.26 Aligned_cols=151 Identities=21% Similarity=0.255 Sum_probs=107.4
Q ss_pred CCCCeeeeccccCCccCCc------cccCCCCCCEEeccCCccCCCCCccccccccccEEEecCccccCCcccccccccc
Q 039344 332 PKLSTLDFSINNITGNVPP------EIGHSSQLGVLDLSSNHIVGEIPIELGKLNFFIKLVLAHNQLSGQLSPKLGSLVQ 405 (873)
Q Consensus 332 ~~L~~L~l~~N~i~~~~~~------~~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 405 (873)
..++.++++.|.+++..|. .++.+++|++|+|++|.+++ +| .+..+++|+.|++++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3445555555555544444 67777777788887777774 55 7777777888888888777 45666666778
Q ss_pred cccccccccccccccCCCcCchhhhhhhcccccCCccCcccc-hhhhhhcccceecccCccccCCCch----------hh
Q 039344 406 LEHLDLSSNRLSNSIPKSLGNLELIHLSELDLSRNFLREAIP-SQICIMQSLEKLNLSHNSLSGLIPS----------CF 474 (873)
Q Consensus 406 L~~L~Ls~N~l~~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~----------~~ 474 (873)
|+.|+|++|++++ +| .+..+. +|+.|+|++|++++..+ ..+..+++|+.|++++|++++.+|. .+
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~--~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLV--NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHH--HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCC--CCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 8888888888874 34 354443 78888888888876443 5677888899999999988877665 37
Q ss_pred hccCCCcEEecCCCccc
Q 039344 475 EKMNGLLHIDISYNELR 491 (873)
Q Consensus 475 ~~~~~L~~l~ls~N~l~ 491 (873)
..+++|+.|| +|+++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 8888999887 66665
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=4.7e-15 Score=143.79 Aligned_cols=137 Identities=19% Similarity=0.212 Sum_probs=117.8
Q ss_pred CccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCc
Q 039344 38 PHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLR 117 (873)
Q Consensus 38 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 117 (873)
...|..+.+|++|++++|+++ .+|......++|++|+|++|.+++. ..|..+++|++|+|++|++++..+..|..++
T Consensus 12 ~~~~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 12 AAQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp SCEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HHhcCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 345788999999999999999 5565444444999999999999965 6899999999999999999966556679999
Q ss_pred ccCcccccccccccccCc--cccCCCCCcEEEccCCCCcccccc---ccCCCCCCCEEEccCCcCc
Q 039344 118 SLSNLQLNNNILSGSIPH--SLGNLTNLATLYIYSNSLSASILG---KIGNLKSLSNLQLSENNFN 178 (873)
Q Consensus 118 ~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~L~~n~i~ 178 (873)
+|++|++++|.++ .+|. .+..+++|+.|++++|.+..+... .+..+++|++|+++.|.+.
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999999997 5665 899999999999999999865443 4889999999999999876
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=9.4e-17 Score=159.11 Aligned_cols=134 Identities=23% Similarity=0.314 Sum_probs=72.4
Q ss_pred ccCCCCCCEEECCCCcccccCCc------cccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccc
Q 039344 17 LRNLKSLSDLELGNNKLSGSIPH------SLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLG 90 (873)
Q Consensus 17 ~~~l~~l~~L~L~~n~l~~~~p~------~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 90 (873)
+.....++.++++.+.+++..|. .|..+++|++|+|++|++++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34445566666666666655554 56666666666666666653 44 5555556666666666555 3444555
Q ss_pred cccccceeeccccccCCCCCccccCCcccCcccccccccccccC-ccccCCCCCcEEEccCCCCcc
Q 039344 91 NLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIP-HSLGNLTNLATLYIYSNSLSA 155 (873)
Q Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~ 155 (873)
.+++|++|++++|++++ +| .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 55555555555555553 22 35555555555555555553211 244555555555555555543
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=3.4e-13 Score=129.52 Aligned_cols=105 Identities=26% Similarity=0.390 Sum_probs=69.5
Q ss_pred CCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccc
Q 039344 23 LSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDT 102 (873)
Q Consensus 23 l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 102 (873)
.+.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 356777777776 4555443 6677777777777766666677777777777777777765566666667777777777
Q ss_pred cccCCCCCccccCCcccCcccccccccc
Q 039344 103 NSLSNSIPSELGNLRSLSNLQLNNNILS 130 (873)
Q Consensus 103 n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 130 (873)
|+|++..+..|..+++|++|+|++|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 7766555555666666666666666665
No 399
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.43 E-value=1.1e-11 Score=136.02 Aligned_cols=304 Identities=11% Similarity=0.073 Sum_probs=168.8
Q ss_pred ccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcc
Q 039344 39 HSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRS 118 (873)
Q Consensus 39 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 118 (873)
+||....+|+.+.+.+ .++.+...+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+.. .++.+...+|.+. +
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-D 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-C
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-C
Confidence 4566666777777764 455566667777777777777644 554666677765 566666643 3443444555553 6
Q ss_pred cCcccccccccccccCccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEccCCcCccC------------CCcccc
Q 039344 119 LSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQLSENNFNGS------------IPPSLG 186 (873)
Q Consensus 119 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~------------~~~~~~ 186 (873)
|+.+.+.++-.. .....|... +|+.+.+.. .+..+...+|..+.+++.+.+..+..... ....+.
T Consensus 115 L~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (379)
T 4h09_A 115 LDDFEFPGATTE-IGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYP 191 (379)
T ss_dssp CSEEECCTTCCE-ECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECC
T ss_pred cccccCCCcccc-ccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceecccc
Confidence 777777654322 334455543 455555543 34455666677777777776665443211 112233
Q ss_pred CCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEecccccCCCCCchhhcCCCCCcEE
Q 039344 187 NLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYRNLVKLTIL 266 (873)
Q Consensus 187 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 266 (873)
....+..+.+..+.-. .....+..+.+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++.+...+|.++.+|+.+
T Consensus 192 ~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i 268 (379)
T 4h09_A 192 AAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTL 268 (379)
T ss_dssp TTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccc
Confidence 4444555554443322 44445556666666666544 22244455666666666666554 444555566666666666
Q ss_pred EccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccccCCCCCCCCCCCCeeeeccccCCc
Q 039344 267 LLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYGEISSDWGRCPKLSTLDFSINNITG 346 (873)
Q Consensus 267 ~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~ 346 (873)
.+..+--.....+|.++++|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.+...+|..|++|+.+.+..+ ++.
T Consensus 269 ~l~~~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~ 346 (379)
T 4h09_A 269 NFYAKVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITL 346 (379)
T ss_dssp EECCCCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCE
T ss_pred cccccceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCE
Confidence 6654422223345566666666666666666566666666666666666433 44455555666666666655433 443
Q ss_pred cCCccccCC
Q 039344 347 NVPPEIGHS 355 (873)
Q Consensus 347 ~~~~~~~~~ 355 (873)
+...+|.++
T Consensus 347 I~~~aF~~c 355 (379)
T 4h09_A 347 IESGAFEGS 355 (379)
T ss_dssp ECTTTTTTS
T ss_pred EchhHhhCC
Confidence 444444443
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=3.8e-13 Score=129.61 Aligned_cols=104 Identities=25% Similarity=0.379 Sum_probs=68.3
Q ss_pred CEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeecccc
Q 039344 24 SDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTN 103 (873)
Q Consensus 24 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (873)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777775 5555443 66777777777777666666777777777777777776555555666667777777777
Q ss_pred ccCCCCCccccCCcccCcccccccccc
Q 039344 104 SLSNSIPSELGNLRSLSNLQLNNNILS 130 (873)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~L~L~~n~l~ 130 (873)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666544445666666666666666665
No 401
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=4.3e-13 Score=128.83 Aligned_cols=104 Identities=27% Similarity=0.341 Sum_probs=51.1
Q ss_pred CceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 47 LATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 47 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
.++|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345555555555 3444332 4555555555555544455555555555555555555544344444444444444444
Q ss_pred cccccccCccccCCCCCcEEEccCCCC
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSL 153 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l 153 (873)
|+|++..+..|..+++|++|+|++|.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~ 114 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPW 114 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCC
Confidence 444433333344444444444444444
No 402
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=7.8e-13 Score=127.42 Aligned_cols=104 Identities=28% Similarity=0.421 Sum_probs=53.1
Q ss_pred ceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCccccccc
Q 039344 48 ATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNNN 127 (873)
Q Consensus 48 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 127 (873)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 4454443 55555555555555555555555555555555555555433333444555555555555
Q ss_pred ccccccCccccCCCCCcEEEccCCCCc
Q 039344 128 ILSGSIPHSLGNLTNLATLYIYSNSLS 154 (873)
Q Consensus 128 ~l~~~~~~~~~~l~~L~~L~L~~n~l~ 154 (873)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 554333333444444444444444443
No 403
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.38 E-value=3.8e-11 Score=131.85 Aligned_cols=305 Identities=10% Similarity=0.076 Sum_probs=228.9
Q ss_pred cccCCCCCCEEECCCCcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCCCCCCccccccccc
Q 039344 16 ELRNLKSLSDLELGNNKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNL 95 (873)
Q Consensus 16 ~~~~l~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 95 (873)
++..-.+|+.+.+.. .++.+...+|.+|.+|+.+.|..+ ++.+...+|.+. +|+.+.+..+ ++.+...+|... +|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 344556788888864 688788899999999999999765 776788889887 6888888754 554667778764 79
Q ss_pred ceeeccccccCCCCCccccCCcccCcccccccccccccCccccCCCCCcEEEccCCCCcc------------ccccccCC
Q 039344 96 ATLYLDTNSLSNSIPSELGNLRSLSNLQLNNNILSGSIPHSLGNLTNLATLYIYSNSLSA------------SILGKIGN 163 (873)
Q Consensus 96 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------~~~~~~~~ 163 (873)
+.+.+..+ +..+...+|.+. +|+.+.+..+ ++......|..+.+++.+.+..+.... .....+..
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred ccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 99999765 343555566654 5777666544 343556778888899888877654321 12233555
Q ss_pred CCCCCEEEccCCcCccCCCccccCCCCCcEEeccCCCCcccCCccccCCCCCCEEEccCcccCCCcccccCCCCCccEEe
Q 039344 164 LKSLSNLQLSENNFNGSIPPSLGNLSNLATLYLDTNSLSYSIPSELGNLRSLSNLSLGYNKLSGSIPISMGNLSNLTYLN 243 (873)
Q Consensus 164 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 243 (873)
...+..+.+...... .....+..+.+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++.+...+|.++.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 666777766554433 45567778889999998765 44467778899999999999876 5556677889999999999
Q ss_pred cccccCCCCCchhhcCCCCCcEEEccCCcCcC-cCCcCCCCCCCCeEEccCcccccccccccccCCCccEEeccCccccc
Q 039344 244 LFENSLSGAIPYEYRNLVKLTILLLGHNQFRG-PIPILRNLTSLERVRLDRNYLTGNISESFYIYPNLTYIDLSQNNFYG 322 (873)
Q Consensus 244 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 322 (873)
+..+ +..+...+|.++.+|+.+.+.++.++. ...+|.++.+|+.+.|..+ ++.+...+|.++++|+.+.+..+ ++.
T Consensus 270 l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~ 346 (379)
T 4h09_A 270 FYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITL 346 (379)
T ss_dssp ECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCE
T ss_pred cccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCE
Confidence 9654 666777889999999999999888876 4558999999999999755 78888999999999999999765 666
Q ss_pred cCCCCCCCCCCC
Q 039344 323 EISSDWGRCPKL 334 (873)
Q Consensus 323 ~~~~~~~~l~~L 334 (873)
+...+|..+..+
T Consensus 347 I~~~aF~~c~~~ 358 (379)
T 4h09_A 347 IESGAFEGSSIT 358 (379)
T ss_dssp ECTTTTTTSSCC
T ss_pred EchhHhhCCCCC
Confidence 777888776533
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=7.3e-15 Score=159.85 Aligned_cols=15 Identities=20% Similarity=0.096 Sum_probs=9.0
Q ss_pred CCCcEEEccCCcCcC
Q 039344 261 VKLTILLLGHNQFRG 275 (873)
Q Consensus 261 ~~L~~L~L~~N~l~~ 275 (873)
++|+.|+|++|.++.
T Consensus 72 ~~L~~L~Ls~n~l~~ 86 (372)
T 3un9_A 72 SSLRQLNLAGVRMTP 86 (372)
T ss_dssp TTCCEEECTTSCCCH
T ss_pred hhCCEEEecCCCCCH
Confidence 456666666666553
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=1.4e-14 Score=157.51 Aligned_cols=62 Identities=19% Similarity=0.080 Sum_probs=29.1
Q ss_pred CCCCEEEccCcccCCCcccccCC-----CCCccEEecccccCCCCCchhhc-CCCCCcEEEccCCcCc
Q 039344 213 RSLSNLSLGYNKLSGSIPISMGN-----LSNLTYLNLFENSLSGAIPYEYR-NLVKLTILLLGHNQFR 274 (873)
Q Consensus 213 ~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~ 274 (873)
++|++|+|++|.|+......+.. .++|++|+|++|.++......+. .+++|+.|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~ 139 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG 139 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC
Confidence 45666666666665332222221 24566666666655432222221 2344445555554443
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=4e-11 Score=124.31 Aligned_cols=145 Identities=12% Similarity=0.041 Sum_probs=113.7
Q ss_pred HHhcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEEecceeE
Q 039344 599 RATNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 599 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 677 (873)
..-..|++....+.|+.+.||++... |+.+++|+........ ...+.+|+.+++.+. +..++++++++.+.+..|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 34467888888899999999999865 6889999986422111 235789999999984 678889999999988999
Q ss_pred EEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 039344 678 IVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC--------------------------------- 724 (873)
Q Consensus 678 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------- 724 (873)
+||||++|.++.+.+. +......++.+++++++.||+..
T Consensus 87 lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 9999999999876631 12234578889999999999810
Q ss_pred -----------------------CCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 725 -----------------------FPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 725 -----------------------~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.+.++|||+++.||+++.++.+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876566799998774
No 407
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=2.3e-11 Score=131.90 Aligned_cols=103 Identities=24% Similarity=0.286 Sum_probs=71.7
Q ss_pred EEECCCC-cccccCCccccCCCCCceEEccC-CcccccCCCCccCCCCCCEEEcccCCCCCCCCcccccccccceeeccc
Q 039344 25 DLELGNN-KLSGSIPHSLGNLTNLATLYIHT-NSLSGSIPGEIGNFRFFSDLELSNNKLSGSIPPSLGNLSNLATLYLDT 102 (873)
Q Consensus 25 ~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 102 (873)
.++++++ +|+ .+|. |..+++|++|+|++ |+|+++.++.|.++++|++|+|++|+|+++.|.+|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566766 666 4566 77777777777775 777766666777777777777777777776677777777777777777
Q ss_pred cccCCCCCccccCCcccCcccccccccc
Q 039344 103 NSLSNSIPSELGNLRSLSNLQLNNNILS 130 (873)
Q Consensus 103 n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 130 (873)
|+|++..+..|..++ |++|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 777755555555554 777777777766
No 408
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=2.8e-11 Score=131.14 Aligned_cols=103 Identities=22% Similarity=0.234 Sum_probs=66.3
Q ss_pred eEEccCC-cccccCCCCccCCCCCCEEEccc-CCCCCCCCcccccccccceeeccccccCCCCCccccCCcccCcccccc
Q 039344 49 TLYIHTN-SLSGSIPGEIGNFRFFSDLELSN-NKLSGSIPPSLGNLSNLATLYLDTNSLSNSIPSELGNLRSLSNLQLNN 126 (873)
Q Consensus 49 ~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 126 (873)
.++++++ +++ .+|. |..+.+|++|+|++ |.|+++.+.+|.+|++|++|+|++|+|+++.|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566665 666 4555 66666666666664 666665556666666666666666666666666666666666666666
Q ss_pred cccccccCccccCCCCCcEEEccCCCCc
Q 039344 127 NILSGSIPHSLGNLTNLATLYIYSNSLS 154 (873)
Q Consensus 127 n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 154 (873)
|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666654444555444 666666666664
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=3.5e-10 Score=117.16 Aligned_cols=136 Identities=15% Similarity=0.090 Sum_probs=100.5
Q ss_pred CCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCc--eeeEEeEEEecceeEEEE
Q 039344 603 DFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 603 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~ 680 (873)
.+.+....+.|..+.||++...+|+.+++|...... ...+.+|+.+++.+.+.+ +++++++....+..++||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 344433334566799999988778889999976431 135778999999986544 567899888888899999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC------------------------------------ 724 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 724 (873)
||++|.++. ... . ....++.++++.++.||+..
T Consensus 95 e~i~G~~l~--~~~------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 95 GEVPGQDLL--SSH------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp ECCSSEETT--TSC------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EecCCcccC--cCc------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 999998874 211 1 12356778888888888752
Q ss_pred -------------------CCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 725 -------------------FPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 725 -------------------~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.+.++|||++|.||+++.++.+.|+|||.+.
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0129999999999999877667799999875
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.01 E-value=1.5e-10 Score=124.71 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=60.0
Q ss_pred hhhcCCCCCcEEEccCCcCcCcCCcCCCCCCCCeEEccCcccccccccccc--cCCCccEEeccC--cccccc-----CC
Q 039344 255 YEYRNLVKLTILLLGHNQFRGPIPILRNLTSLERVRLDRNYLTGNISESFY--IYPNLTYIDLSQ--NNFYGE-----IS 325 (873)
Q Consensus 255 ~~~~~l~~L~~L~L~~N~l~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~--~~~~L~~L~Ls~--N~l~~~-----~~ 325 (873)
..+..+++|+.|++++|.-.... .+ .+++|++|+|..|.++......+. .+|+|+.|+|+. |...+. +.
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~l~-~~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLSIG-KK-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCBCC-SC-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred HHHhcCCCCcEEEEeCCCCceec-cc-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 44566677777777766311122 23 267788888887777654433343 567788777753 221111 00
Q ss_pred CCC--CCCCCCCeeeeccccCCccCCcccc---CCCCCCEEeccCCccCC
Q 039344 326 SDW--GRCPKLSTLDFSINNITGNVPPEIG---HSSQLGVLDLSSNHIVG 370 (873)
Q Consensus 326 ~~~--~~l~~L~~L~l~~N~i~~~~~~~~~---~~~~L~~L~Ls~N~i~~ 370 (873)
..+ ..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|++
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 111 2356666666666665543322222 24455555555555543
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=2e-09 Score=117.09 Aligned_cols=143 Identities=13% Similarity=0.182 Sum_probs=107.5
Q ss_pred CCceeeecCCeEEEEEEeCCCcEEEEEEcc--CCCCCcchhHHHHHHHHHHHHhcc--CCceeeEEeEEEec---ceeEE
Q 039344 606 DEHCIGKGGQGSVYMSKLASGEIIAVKKFH--SPLPGEMTFQQEFLNEVKALTEIW--HRNIVKVYGFCLHV---RHLFI 678 (873)
Q Consensus 606 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~l 678 (873)
..+.++.|.++.||+.+..+ ..+++|+.. .... ......+.+|+.+++.+. +..++++++++.+. +..++
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 35678999999999998774 578888875 2211 111356788999999996 45688999998876 45899
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC---------------------------------- 724 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 724 (873)
||||++|..+.+.. ...++..++..++.++++.++.||+..
T Consensus 119 vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 99999988774321 123677888899999999999999731
Q ss_pred ---------------------CCCeeeCCCCCCCeeeCCCCC--eEEeccccccc
Q 039344 725 ---------------------FPPIVHRDISSKNVLLDFENE--AHVSDFGIAKF 756 (873)
Q Consensus 725 ---------------------~~~i~H~Dlk~~Nill~~~~~--~kl~Dfg~a~~ 756 (873)
.+.++|||+++.||+++.++. +.|.||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 147999999999999998763 68999999874
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=2.2e-10 Score=123.36 Aligned_cols=59 Identities=24% Similarity=0.245 Sum_probs=33.7
Q ss_pred ccccCCCCCCEEEccCcc-cCCCcccccCCCCCccEEecccccCCCCCchhhc--CCCCCcEEEcc
Q 039344 207 SELGNLRSLSNLSLGYNK-LSGSIPISMGNLSNLTYLNLFENSLSGAIPYEYR--NLVKLTILLLG 269 (873)
Q Consensus 207 ~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~ 269 (873)
..+..+++|+.|+|++|. +. . +. + .+++|+.|+|..|.+.......+. .+++|+.|+|+
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~-l-~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS-I-GK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB-C-CS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HHHhcCCCCcEEEEeCCCCce-e-cc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 345566777777776662 22 1 21 2 266777777777766543333333 56777777764
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=2.3e-09 Score=113.52 Aligned_cols=185 Identities=23% Similarity=0.247 Sum_probs=124.0
Q ss_pred CceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhc-cCCc--eeeEEeEEEecc---eeEEEE
Q 039344 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEI-WHRN--IVKVYGFCLHVR---HLFIVY 680 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~ 680 (873)
.+.++.|.+..||+.. +.+++|+.... .....+.+|+.+++.+ .+.. +.+++.+..... ..|+||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 4679999999999873 56888885421 2356788999999988 3333 455655544333 358999
Q ss_pred EeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 039344 681 EYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC------------------------------------ 724 (873)
Q Consensus 681 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 724 (873)
|+++|.++.+... ..++.+++..++.++++.++.||+..
T Consensus 96 ~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 9999988764321 23677778888889999988888621
Q ss_pred -------------------CCCeeeCCCCCCCeeeCC--CCCeEEeccccccccCCCCCCccccc------c--------
Q 039344 725 -------------------FPPIVHRDISSKNVLLDF--ENEAHVSDFGIAKFLKPDSSNWTELA------G-------- 769 (873)
Q Consensus 725 -------------------~~~i~H~Dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~------g-------- 769 (873)
.+.++|+|+++.||+++. ++.+.++||+.+....+. ....... +
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHH
Confidence 135799999999999998 456789999998754321 1110000 0
Q ss_pred -cccccc-ccccccCCCCCcchhHHHHHHHHHHHhCCCCCc
Q 039344 770 -TYGYVA-PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 808 (873)
Q Consensus 770 -~~~y~a-PE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~ 808 (873)
..++.. |+.... .....+.|++|.++|.+.+|+.||.
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 001111 222111 1123689999999999999998853
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.51 E-value=6.4e-07 Score=95.26 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=103.2
Q ss_pred CCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccC----CceeeEEeEEEecceeEE
Q 039344 603 DFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH----RNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 603 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~l 678 (873)
.+...+.++.|....||+. |+.+++|+... ......+.+|..+++.+.+ ..+++++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR-----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc-----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 5666788999999999998 67788887642 1223568899999998865 235566655 56789
Q ss_pred EEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCC---------------------------------
Q 039344 679 VYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCF--------------------------------- 725 (873)
Q Consensus 679 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--------------------------------- 725 (873)
||||++|.++..... ..++..++..++.++++.++.||+...
T Consensus 105 vme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 999999988863321 235666777888888888888885422
Q ss_pred ---------------------------CCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 726 ---------------------------PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 726 ---------------------------~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
+.++|+|+++.||+++.++.+.|+||+.+....
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999986543
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.49 E-value=1.5e-08 Score=98.35 Aligned_cols=65 Identities=11% Similarity=0.156 Sum_probs=28.1
Q ss_pred CCCCCCCeEEccCcccccccc----cccccCCCccEEeccCcccccc----CCCCCCCCCCCCeeee--ccccCC
Q 039344 281 RNLTSLERVRLDRNYLTGNIS----ESFYIYPNLTYIDLSQNNFYGE----ISSDWGRCPKLSTLDF--SINNIT 345 (873)
Q Consensus 281 ~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l--~~N~i~ 345 (873)
...++|++|+|++|.|++... ..+...+.|++|+|++|.|++. +...+...++|++|+| ++|.|+
T Consensus 62 ~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 62 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 334445555555555443222 2222334455555555554432 1223333444555555 444444
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.49 E-value=6.2e-09 Score=101.00 Aligned_cols=113 Identities=15% Similarity=0.140 Sum_probs=52.7
Q ss_pred ccCCCccEEeccCc-ccccc----CCCCCCCCCCCCeeeeccccCCccC----CccccCCCCCCEEeccCCccCCC----
Q 039344 305 YIYPNLTYIDLSQN-NFYGE----ISSDWGRCPKLSTLDFSINNITGNV----PPEIGHSSQLGVLDLSSNHIVGE---- 371 (873)
Q Consensus 305 ~~~~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~l~~N~i~~~~----~~~~~~~~~L~~L~Ls~N~i~~~---- 371 (873)
...+.|++|+|++| .+... +...+...++|++|+|++|+|.+.. ...+...++|++|+|++|.|++.
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 33444445555544 44321 1222334455566666666554322 22333445566666666666532
Q ss_pred CCccccccccccEEEe--cCccccCCcc----cccccccccccccccccccc
Q 039344 372 IPIELGKLNFFIKLVL--AHNQLSGQLS----PKLGSLVQLEHLDLSSNRLS 417 (873)
Q Consensus 372 ~~~~~~~l~~L~~L~L--~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~ 417 (873)
+...+.....|++|+| ++|.|+.... ..+...++|++|+|++|.+.
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2233344445555555 4455543222 22333355555555555553
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=4.8e-08 Score=99.36 Aligned_cols=79 Identities=30% Similarity=0.399 Sum_probs=38.3
Q ss_pred ccccccccccccccccc--ccCCCcCchhhhhhhcccccCCccCcccchhhhhhc--ccceecccCccccCCCc------
Q 039344 402 SLVQLEHLDLSSNRLSN--SIPKSLGNLELIHLSELDLSRNFLREAIPSQICIMQ--SLEKLNLSHNSLSGLIP------ 471 (873)
Q Consensus 402 ~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~------ 471 (873)
.+++|+.|+||+|+|++ .+|..+..+. +|+.|+|++|+|++. ..+..+. +|++|+|++|++++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~--~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~ 243 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAP--NLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYI 243 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHST--TCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCC--CCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHH
Confidence 34455555555555553 2233333322 555555555555542 2223333 56666666666655444
Q ss_pred -hhhhccCCCcEEe
Q 039344 472 -SCFEKMNGLLHID 484 (873)
Q Consensus 472 -~~~~~~~~L~~l~ 484 (873)
..+..+++|+.||
T Consensus 244 ~~il~~~P~L~~LD 257 (267)
T 3rw6_A 244 SAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHCTTCCEES
T ss_pred HHHHHHCcccCeEC
Confidence 1245566666554
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.35 E-value=2.9e-06 Score=87.88 Aligned_cols=135 Identities=13% Similarity=0.094 Sum_probs=99.6
Q ss_pred ceeeecCCe-EEEEEEeC-CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEEecceeEEEEEecc
Q 039344 608 HCIGKGGQG-SVYMSKLA-SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVRHLFIVYEYFK 684 (873)
Q Consensus 608 ~~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 684 (873)
+.+..|..| .||+.... ++..+++|+-.. ....++.+|...++.+. +--+.++++++.+.+..++|||+++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 356667666 68988765 466788998542 12467889999999884 4447889999999999999999999
Q ss_pred CCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 039344 685 MCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDC---------------------------------------- 724 (873)
Q Consensus 685 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 724 (873)
|.++.+.... .......++.++++.++.||+..
T Consensus 104 G~~~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 9887765422 12234456667777777777531
Q ss_pred ---------------CCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 725 ---------------FPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 725 ---------------~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0237899999999999987777899999875
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.30 E-value=3.7e-06 Score=87.42 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=61.2
Q ss_pred CCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCC---ceeeEEeEEEecceeEEEE
Q 039344 604 FDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR---NIVKVYGFCLHVRHLFIVY 680 (873)
Q Consensus 604 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~ 680 (873)
....+.+|.|.++.||+++..+|+.++||+....... ....|..|++.++.+++. .+++++++. ..++||
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~---~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc---hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 3445789999999999999888999999996532111 135688999999999765 578888764 368999
Q ss_pred EeccCCCh
Q 039344 681 EYFKMCSL 688 (873)
Q Consensus 681 e~~~~~~L 688 (873)
||++++.+
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99998874
No 420
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.28 E-value=7.1e-08 Score=98.15 Aligned_cols=40 Identities=33% Similarity=0.368 Sum_probs=20.1
Q ss_pred CCCCCCEEEcccCCCCCC--CCcccccccccceeeccccccC
Q 039344 67 NFRFFSDLELSNNKLSGS--IPPSLGNLSNLATLYLDTNSLS 106 (873)
Q Consensus 67 ~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~ 106 (873)
++++|+.|+|++|+|++. +|..+..+++|+.|+|++|+|+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 345555555555555541 2234444555555555555554
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.24 E-value=6.7e-06 Score=88.69 Aligned_cols=145 Identities=14% Similarity=0.178 Sum_probs=92.2
Q ss_pred CCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCC--ceeeEEeEEEec-ceeEEEEE
Q 039344 605 DDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR--NIVKVYGFCLHV-RHLFIVYE 681 (873)
Q Consensus 605 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~-~~~~lv~e 681 (873)
...+.++.|....+|+.+.. |+.+++|..... ..+..|+.+++.+... .+.++++++.+. +..++|||
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~-g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVG-GRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp EEEEEEEECSSEEEEEEEET-TEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred ceEEECCCCCcceEEEEEEC-CcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 34567899999999998864 788999987431 3588899999988643 356788887764 67899999
Q ss_pred eccCCChhhH------------------hccccccc--------------CCChHHH---------------------HH
Q 039344 682 YFKMCSLAVI------------------LSNDAAAK--------------NLGWTRR---------------------MN 708 (873)
Q Consensus 682 ~~~~~~L~~~------------------l~~~~~~~--------------~~~~~~~---------------------~~ 708 (873)
|++|.++.+. ++...... .-+|... ..
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9998665421 01000000 0001111 01
Q ss_pred HHHHHHHHHHHHHhCC-CCCeeeCCCCCCCeeeCCCCCeEEeccccccccC
Q 039344 709 MIKGIVDALSYMHNDC-FPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLK 758 (873)
Q Consensus 709 i~~~i~~~l~~LH~~~-~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 758 (873)
....+...++++.... .+.++|+|+.+.||+++.++.+.|+||+.+..-.
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 1112222223332210 1468999999999999877778899999987543
No 422
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.21 E-value=9e-06 Score=85.62 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=95.4
Q ss_pred CceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCC---ceeeEEeEEE-ecceeEEEEEe
Q 039344 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHR---NIVKVYGFCL-HVRHLFIVYEY 682 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~ 682 (873)
.+.++.|....||+. |+.+++|+... ......+.+|+.+++.+.+. .+.+++.++. ..+..++||||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 456889999999998 56788888431 12346789999999999642 4677777775 34567899999
Q ss_pred ccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 039344 683 FKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHND--------------------------------------- 723 (873)
Q Consensus 683 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 723 (873)
++|.++.+... ..++..++..++.++++.++.||+.
T Consensus 95 i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 95 VQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred cCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 99988765311 1134444455555555555555542
Q ss_pred ------------------CCCCeeeCCCCCCCeeeCC---CCC-eEEecccccccc
Q 039344 724 ------------------CFPPIVHRDISSKNVLLDF---ENE-AHVSDFGIAKFL 757 (873)
Q Consensus 724 ------------------~~~~i~H~Dlk~~Nill~~---~~~-~kl~Dfg~a~~~ 757 (873)
..+.++|+|+++.||+++. ++. +.|+||+.+...
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999997 455 489999988643
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.02 E-value=8.2e-06 Score=88.22 Aligned_cols=83 Identities=5% Similarity=-0.043 Sum_probs=56.3
Q ss_pred cee-eecCCeEEEEEEeC-------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-C--CceeeEEeEEEec---
Q 039344 608 HCI-GKGGQGSVYMSKLA-------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-H--RNIVKVYGFCLHV--- 673 (873)
Q Consensus 608 ~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~--- 673 (873)
+.| +.|....+|+.... +++.+++|+..............+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88889999998754 26678888865321000000134678888888884 3 3577888888665
Q ss_pred ceeEEEEEeccCCChhh
Q 039344 674 RHLFIVYEYFKMCSLAV 690 (873)
Q Consensus 674 ~~~~lv~e~~~~~~L~~ 690 (873)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877653
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.01 E-value=7.3e-07 Score=83.87 Aligned_cols=83 Identities=10% Similarity=0.156 Sum_probs=41.6
Q ss_pred CCceEEccCCcccccCCCCccCCCCCCEEEcccCC-CCCCCCcccccc----cccceeeccccc-cCCCCCccccCCccc
Q 039344 46 NLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNK-LSGSIPPSLGNL----SNLATLYLDTNS-LSNSIPSELGNLRSL 119 (873)
Q Consensus 46 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~L 119 (873)
+|++|+|++|.++..--..+.++++|++|+|++|. ++...-..+..+ ++|++|+|++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554444444555555555555553 443222233332 246666666653 553323344556666
Q ss_pred Ccccccccc
Q 039344 120 SNLQLNNNI 128 (873)
Q Consensus 120 ~~L~L~~n~ 128 (873)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666654
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.95 E-value=1.7e-06 Score=81.32 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=42.1
Q ss_pred CCCeeeeccccCCccCCccccCCCCCCEEeccCCc-cCCCCCcccccc----ccccEEEecCc-cccCCccccccccccc
Q 039344 333 KLSTLDFSINNITGNVPPEIGHSSQLGVLDLSSNH-IVGEIPIELGKL----NFFIKLVLAHN-QLSGQLSPKLGSLVQL 406 (873)
Q Consensus 333 ~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~Ls~N~-i~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~L 406 (873)
+|+.||+++|.|++..-..+..+++|+.|+|++|. |++..-..+..+ ++|++|+|++| ++++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554444444555555555555553 443333333332 24555555555 3554444445556666
Q ss_pred ccccccccc
Q 039344 407 EHLDLSSNR 415 (873)
Q Consensus 407 ~~L~Ls~N~ 415 (873)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666554
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87 E-value=5.9e-05 Score=80.92 Aligned_cols=140 Identities=19% Similarity=0.290 Sum_probs=81.0
Q ss_pred ceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccC--CceeeEEe------EEEecceeEEE
Q 039344 608 HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH--RNIVKVYG------FCLHVRHLFIV 679 (873)
Q Consensus 608 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv 679 (873)
+.++.|..+.||+....+| .+++|+.... ...+..|+.+++.+.. -.+++++. +....+..+++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 4466678899999987755 4889988641 1334456666665531 13344443 22346678999
Q ss_pred EEeccCCChh--------------hHhccccc----c-------cCCChHHH----------------------------
Q 039344 680 YEYFKMCSLA--------------VILSNDAA----A-------KNLGWTRR---------------------------- 706 (873)
Q Consensus 680 ~e~~~~~~L~--------------~~l~~~~~----~-------~~~~~~~~---------------------------- 706 (873)
|||++|..+. ..+|.... . ....|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986542 01111100 0 00122211
Q ss_pred ---HHHHHHHHHHHHHHHh----------CCCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 707 ---MNMIKGIVDALSYMHN----------DCFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 707 ---~~i~~~i~~~l~~LH~----------~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
..+..++..++++|+. ...+.++|||+.+.||+++.++.+.++||+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111234445666653 012489999999999999888899999999875
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.75 E-value=8.5e-05 Score=81.44 Aligned_cols=78 Identities=17% Similarity=0.056 Sum_probs=50.2
Q ss_pred CceeeecCCeEEEEEEeC-CCcEEEEEEccCCCC--Cc--chhHHHHHHHHHHHHhccC--C-ceeeEEeEEEecceeEE
Q 039344 607 EHCIGKGGQGSVYMSKLA-SGEIIAVKKFHSPLP--GE--MTFQQEFLNEVKALTEIWH--R-NIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~h--~-niv~l~~~~~~~~~~~l 678 (873)
.+.+|.|.++.||+++.. +++.++||....... .. ......+..|.++++.+.. | .+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 468899998653211 00 0112456778888888742 3 45566654 3455689
Q ss_pred EEEeccCC
Q 039344 679 VYEYFKMC 686 (873)
Q Consensus 679 v~e~~~~~ 686 (873)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.72 E-value=0.00018 Score=75.23 Aligned_cols=138 Identities=16% Similarity=0.179 Sum_probs=92.2
Q ss_pred CceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc---CCceeeEEeEEEecceeEEEEEec
Q 039344 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW---HRNIVKVYGFCLHVRHLFIVYEYF 683 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 683 (873)
.+.++.|....+|+.... +..+++|+.... ....+..|+..++.+. ...++++++++...+..++||||+
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 467899999999999874 677888986532 2467889999999884 367889999998888899999999
Q ss_pred cCCChhh-----------Hhccccc----c---------------cCCChHHHH---HHHH----------------HHH
Q 039344 684 KMCSLAV-----------ILSNDAA----A---------------KNLGWTRRM---NMIK----------------GIV 714 (873)
Q Consensus 684 ~~~~L~~-----------~l~~~~~----~---------------~~~~~~~~~---~i~~----------------~i~ 714 (873)
++..... .+|.... + ..-+|.... ++.. .++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9876421 1121111 0 011344321 1111 111
Q ss_pred -HHHHHHHh-CCCCCeeeCCCCCCCeeeCCCCCeEEeccc
Q 039344 715 -DALSYMHN-DCFPPIVHRDISSKNVLLDFENEAHVSDFG 752 (873)
Q Consensus 715 -~~l~~LH~-~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 752 (873)
.....|.. ...+.++|+|+.+.|++++.++ +.|.||+
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11223422 2246899999999999999887 8899984
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.66 E-value=1.1e-05 Score=77.41 Aligned_cols=42 Identities=14% Similarity=0.212 Sum_probs=18.8
Q ss_pred CCCCCCCCeEEccCccccccccc----ccccCCCccEEeccCcccc
Q 039344 280 LRNLTSLERVRLDRNYLTGNISE----SFYIYPNLTYIDLSQNNFY 321 (873)
Q Consensus 280 l~~l~~L~~L~L~~n~l~~~~~~----~~~~~~~L~~L~Ls~N~l~ 321 (873)
+...+.|+.|+|++|.|++.... .+...+.|++|+|++|.|+
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 33344455555555555433222 2223344555555555554
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.64 E-value=4.3e-06 Score=80.19 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=29.7
Q ss_pred CCCccEEeccCc-ccccc----CCCCCCCCCCCCeeeeccccCCccCCc----cccCCCCCCEEeccCCccCC
Q 039344 307 YPNLTYIDLSQN-NFYGE----ISSDWGRCPKLSTLDFSINNITGNVPP----EIGHSSQLGVLDLSSNHIVG 370 (873)
Q Consensus 307 ~~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~l~~N~i~~~~~~----~~~~~~~L~~L~Ls~N~i~~ 370 (873)
.+.|++|+|++| +|... +..++...+.|+.|+|++|.|.+.... .+...+.|++|+|++|.|++
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 344455555443 44321 223333444555555555555433222 22344556666666666553
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.51 E-value=0.00046 Score=71.79 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=58.6
Q ss_pred hcCCCCCceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-C--CceeeEEeEEEecceeE
Q 039344 601 TNDFDDEHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-H--RNIVKVYGFCLHVRHLF 677 (873)
Q Consensus 601 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~~~~~ 677 (873)
..+....+.+|.|..+.||+.+..+|+.|++|+........ ...|..|+..|+.+. . --+++++++. ..+
T Consensus 14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~ 86 (288)
T 3f7w_A 14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRT 86 (288)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTE
T ss_pred CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---hhHHHHHHHHHHHHHhhCCCCcceEEecc----Cce
Confidence 34555678899999999999999999999999875432221 245788999999884 2 2355666553 347
Q ss_pred EEEEeccCCCh
Q 039344 678 IVYEYFKMCSL 688 (873)
Q Consensus 678 lv~e~~~~~~L 688 (873)
+||||++++..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999886643
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.38 E-value=0.00097 Score=73.48 Aligned_cols=76 Identities=12% Similarity=0.110 Sum_probs=48.0
Q ss_pred CCeeeCCCCCCCeeeCCCCCeEEeccccccccCCCCCCcccccc--ccccccccccccC---CCCCcchhHHHHHHHHHH
Q 039344 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWTELAG--TYGYVAPELAYTM---KVTEKCDVYSFGVLALEV 800 (873)
Q Consensus 726 ~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~sDv~s~G~il~el 800 (873)
+.++|||+++.||+++.++ ++++||+.+....+. ........ ...|.+|+..... ......++.+....+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3899999999999999876 999999988743321 11111111 1346676654321 112235556778888877
Q ss_pred HhC
Q 039344 801 IKG 803 (873)
Q Consensus 801 ~tg 803 (873)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.10 E-value=0.0014 Score=69.69 Aligned_cols=142 Identities=15% Similarity=0.090 Sum_probs=74.2
Q ss_pred ceeeecCCeE-EEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccC--CceeeEEeEEEecceeEEEEEecc
Q 039344 608 HCIGKGGQGS-VYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWH--RNIVKVYGFCLHVRHLFIVYEYFK 684 (873)
Q Consensus 608 ~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~ 684 (873)
+.++.|+... +|+....+|+.+++|....... .++..|+.+++.+.. -.+++++.+..+.+ +++||++.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 4565565554 6677665467777776543211 223456677766632 23567777754433 68999988
Q ss_pred CCChhhHhccccc---------------------c--cCCChHHHH-------H-------------HHHHHHHHHHHHH
Q 039344 685 MCSLAVILSNDAA---------------------A--KNLGWTRRM-------N-------------MIKGIVDALSYMH 721 (873)
Q Consensus 685 ~~~L~~~l~~~~~---------------------~--~~~~~~~~~-------~-------------i~~~i~~~l~~LH 721 (873)
+..+.+++..... . ..++..... . ....+...++.+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 7666544321110 0 001111000 0 0011122223331
Q ss_pred h---CCCCCeeeCCCCCCCeeeCCC----CCeEEecccccccc
Q 039344 722 N---DCFPPIVHRDISSKNVLLDFE----NEAHVSDFGIAKFL 757 (873)
Q Consensus 722 ~---~~~~~i~H~Dlk~~Nill~~~----~~~kl~Dfg~a~~~ 757 (873)
. ...+.++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1 123479999999999999875 67999999988754
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.98 E-value=0.0016 Score=71.71 Aligned_cols=73 Identities=18% Similarity=0.302 Sum_probs=50.6
Q ss_pred CceeeecCCeEEEEEEeCC--------CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCce-eeEEeEEEecceeE
Q 039344 607 EHCIGKGGQGSVYMSKLAS--------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI-VKVYGFCLHVRHLF 677 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~ 677 (873)
.+.|+.|....+|+....+ ++.+++|+...+ .. ...+..|..+++.+...++ +++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 3568889999999998753 578999998532 11 1455679999888853333 677776542 3
Q ss_pred EEEEeccCCCh
Q 039344 678 IVYEYFKMCSL 688 (873)
Q Consensus 678 lv~e~~~~~~L 688 (873)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999986444
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.96 E-value=0.0065 Score=64.24 Aligned_cols=142 Identities=13% Similarity=0.148 Sum_probs=82.8
Q ss_pred ceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCc--eeeEEeE-----EEecceeEEEE
Q 039344 608 HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IVKVYGF-----CLHVRHLFIVY 680 (873)
Q Consensus 608 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~ 680 (873)
..++ |....||+....+|+.+++|....... ....+..|..+++.+.... +++++.. ....+..+++|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEE
Confidence 4566 888899998877787899999863211 1356777888888774222 4455543 22345668899
Q ss_pred EeccCCChhh-----H---------hccccc------ccCCChHHH----HH---------------HHHHHHHHHHHHH
Q 039344 681 EYFKMCSLAV-----I---------LSNDAA------AKNLGWTRR----MN---------------MIKGIVDALSYMH 721 (873)
Q Consensus 681 e~~~~~~L~~-----~---------l~~~~~------~~~~~~~~~----~~---------------i~~~i~~~l~~LH 721 (873)
|+++|..+.. . +|.... ....++... .. +...+.+.++.+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9998754320 0 111000 001121110 00 1111112233332
Q ss_pred hC----CCCCeeeCCCCCCCeeeCCCCCeEEeccccccc
Q 039344 722 ND----CFPPIVHRDISSKNVLLDFENEAHVSDFGIAKF 756 (873)
Q Consensus 722 ~~----~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 756 (873)
.. ....++|||+++.||+++ + .+.++||+.+..
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 21 223688999999999999 5 899999998764
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.92 E-value=0.0068 Score=63.89 Aligned_cols=158 Identities=13% Similarity=0.157 Sum_probs=88.4
Q ss_pred cCHHHHHHHhcCCCCC-----ceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCc--ee
Q 039344 592 IIYEEIIRATNDFDDE-----HCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN--IV 664 (873)
Q Consensus 592 ~~~~e~~~~~~~~~~~-----~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv 664 (873)
++.+++......|... +.++.|....+|+....+| .+++|...... . .+.+..|+.+++.+.... ++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~---~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--E---KNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--C---HHHHHHHHHHHHHHHHCCCCCC
Confidence 4455555555566652 3466788899999987766 57788876421 1 134567788877774222 34
Q ss_pred eEEeE------EEecceeEEEEEeccCCChhh--------------Hhccccc--ccC----C---ChHHHHH-------
Q 039344 665 KVYGF------CLHVRHLFIVYEYFKMCSLAV--------------ILSNDAA--AKN----L---GWTRRMN------- 708 (873)
Q Consensus 665 ~l~~~------~~~~~~~~lv~e~~~~~~L~~--------------~l~~~~~--~~~----~---~~~~~~~------- 708 (873)
+++.. ....+..+++|+|++|..+.. .+|.... ... . .|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 44421 123456789999999865321 0111100 000 0 1221100
Q ss_pred -----HHHHHHHHHHHHHhC----CCCCeeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 709 -----MIKGIVDALSYMHND----CFPPIVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 709 -----i~~~i~~~l~~LH~~----~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
+...+.+.+++++.. ...+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555532 12478999999999999977666899999775
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.91 E-value=0.0031 Score=65.88 Aligned_cols=71 Identities=13% Similarity=-0.031 Sum_probs=45.1
Q ss_pred CceeeecCCeEEEEEEeCCCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCce-eeEEeEEEecceeEEEEEec-c
Q 039344 607 EHCIGKGGQGSVYMSKLASGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI-VKVYGFCLHVRHLFIVYEYF-K 684 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 684 (873)
.+.|+.|....+|+. +.+++|+........ ....+|+.+++.+....+ .++++++ .+.-++++||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~----~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY----INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C----CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce----eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 678999999999999 568888876431111 112467777777743233 4666543 33457899999 6
Q ss_pred CCCh
Q 039344 685 MCSL 688 (873)
Q Consensus 685 ~~~L 688 (873)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5544
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.89 E-value=0.00076 Score=60.36 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=24.5
Q ss_pred ccceecccCccccCCCchhhhccCCCcEEecCCCccc
Q 039344 455 SLEKLNLSHNSLSGLIPSCFEKMNGLLHIDISYNELR 491 (873)
Q Consensus 455 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~ls~N~l~ 491 (873)
+|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4666666666666666666666666667777766664
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.83 E-value=0.0036 Score=67.28 Aligned_cols=141 Identities=16% Similarity=0.164 Sum_probs=83.2
Q ss_pred ceeeecCCeEEEEEEeC--------CCcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEEecceeEE
Q 039344 608 HCIGKGGQGSVYMSKLA--------SGEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 608 ~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 678 (873)
+.+..|....+|+.... +++.+++|+..... .....+.+|..+++.+. +.-..++++++.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 56777888999999875 25789999863311 11355678999998884 3334677776643 38
Q ss_pred EEEeccCCChhhH-h----------------cccc--cccCCC--hHHHHHHHHHHHH-------------------HHH
Q 039344 679 VYEYFKMCSLAVI-L----------------SNDA--AAKNLG--WTRRMNMIKGIVD-------------------ALS 718 (873)
Q Consensus 679 v~e~~~~~~L~~~-l----------------~~~~--~~~~~~--~~~~~~i~~~i~~-------------------~l~ 718 (873)
||||++|.++..- + |... ..+... +.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999998665311 0 1110 111122 3444445443322 223
Q ss_pred HH----HhC-CCCCeeeCCCCCCCeeeCCC----CCeEEeccccccc
Q 039344 719 YM----HND-CFPPIVHRDISSKNVLLDFE----NEAHVSDFGIAKF 756 (873)
Q Consensus 719 ~L----H~~-~~~~i~H~Dlk~~Nill~~~----~~~kl~Dfg~a~~ 756 (873)
+| ... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 33 221 12368899999999999876 6899999998863
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.71 E-value=0.0017 Score=58.00 Aligned_cols=57 Identities=19% Similarity=0.342 Sum_probs=40.1
Q ss_pred CEEECCCCccc-ccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEcccCCCC
Q 039344 24 SDLELGNNKLS-GSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSNNKLS 82 (873)
Q Consensus 24 ~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 82 (873)
..++-++++++ ..+|..+. ++|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777775 34554433 46778888888888666677777788888888887765
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.45 E-value=0.014 Score=64.45 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=48.1
Q ss_pred CceeeecCCeEEEEEEeCC-CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCce-eeEEeEEEecceeEEEEEecc
Q 039344 607 EHCIGKGGQGSVYMSKLAS-GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRNI-VKVYGFCLHVRHLFIVYEYFK 684 (873)
Q Consensus 607 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~ 684 (873)
.+.|+.|....+|+....+ ++.+++|+......... +..+|..+++.+...++ +++++++. + ..||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i----dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII----NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS----CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc----CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 3578889999999998875 47888988754221111 12478888888854444 57777763 2 35999998
Q ss_pred CCCh
Q 039344 685 MCSL 688 (873)
Q Consensus 685 ~~~L 688 (873)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7554
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.19 E-value=0.013 Score=62.31 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=28.2
Q ss_pred CCeeeCCCCCCCeeeCCCCCeEEecccccccc
Q 039344 726 PPIVHRDISSKNVLLDFENEAHVSDFGIAKFL 757 (873)
Q Consensus 726 ~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 757 (873)
..++|+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998889999999887643
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.17 E-value=0.007 Score=65.23 Aligned_cols=73 Identities=8% Similarity=0.011 Sum_probs=44.4
Q ss_pred ceeeecCCeEEEEEEeCC---------CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhccCCc-eeeEEeEEEecceeE
Q 039344 608 HCIGKGGQGSVYMSKLAS---------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIWHRN-IVKVYGFCLHVRHLF 677 (873)
Q Consensus 608 ~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~ 677 (873)
+.++.|....+|+....+ ++.+++|+....... ..+...|..+++.+...+ ++++++.. . -+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 567888889999998654 267888887542111 112357888888875333 45676554 2 36
Q ss_pred EEEEeccCCCh
Q 039344 678 IVYEYFKMCSL 688 (873)
Q Consensus 678 lv~e~~~~~~L 688 (873)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.02 E-value=0.024 Score=54.47 Aligned_cols=103 Identities=17% Similarity=0.105 Sum_probs=66.6
Q ss_pred CChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCeeeCCCCCeEEeccccccccCCCCCCcc
Q 039344 686 CSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNVLLDFENEAHVSDFGIAKFLKPDSSNWT 765 (873)
Q Consensus 686 ~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 765 (873)
-+|.++|... +.+++++++|.++.|.+.++.-.-.+. .-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 4788888643 467999999999999999988763211 111233456889999999998764 1111
Q ss_pred ccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 039344 766 ELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 806 (873)
Q Consensus 766 ~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P 806 (873)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123467888753 3456788999999999998865555
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.58 E-value=0.029 Score=60.46 Aligned_cols=144 Identities=14% Similarity=0.131 Sum_probs=83.0
Q ss_pred ceeeecCCeEEEEEEeCC--------CcEEEEEEccCCCCC---------cchh------HHHHHHHHHHHHhcc-CCce
Q 039344 608 HCIGKGGQGSVYMSKLAS--------GEIIAVKKFHSPLPG---------EMTF------QQEFLNEVKALTEIW-HRNI 663 (873)
Q Consensus 608 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~---------~~~~------~~~~~~e~~~l~~l~-h~ni 663 (873)
+.+..|-...+|+...++ ++.|.+++....... .... .+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778888999988754 367888887542110 0000 112345888888884 4445
Q ss_pred eeEEeEEEecceeEEEEEeccCCChhh--Hh---------------cccc--cccCCC--hHHHHHHHHHHH--------
Q 039344 664 VKVYGFCLHVRHLFIVYEYFKMCSLAV--IL---------------SNDA--AAKNLG--WTRRMNMIKGIV-------- 714 (873)
Q Consensus 664 v~l~~~~~~~~~~~lv~e~~~~~~L~~--~l---------------~~~~--~~~~~~--~~~~~~i~~~i~-------- 714 (873)
.++++++.+ .+|+||+++.++.. +. |... ..+... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677777643 28999999765521 10 1110 111122 223333333221
Q ss_pred --------------HHH----HHHHhC-CCCCeeeCCCCCCCeeeCCC------CCeEEecccccc
Q 039344 715 --------------DAL----SYMHND-CFPPIVHRDISSKNVLLDFE------NEAHVSDFGIAK 755 (873)
Q Consensus 715 --------------~~l----~~LH~~-~~~~i~H~Dlk~~Nill~~~------~~~kl~Dfg~a~ 755 (873)
.-+ +++... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 22367899999999999887 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.49 E-value=0.082 Score=57.47 Aligned_cols=73 Identities=8% Similarity=-0.026 Sum_probs=47.9
Q ss_pred ceeeecCCeEEEEEEeCC--------CcEEEEEEccCCCCCcchhHHHHHHHHHHHHhcc-CCceeeEEeEEEecceeEE
Q 039344 608 HCIGKGGQGSVYMSKLAS--------GEIIAVKKFHSPLPGEMTFQQEFLNEVKALTEIW-HRNIVKVYGFCLHVRHLFI 678 (873)
Q Consensus 608 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 678 (873)
+.+..|....+|+....+ ++.+++|+.......- -+..+|..+++.+. +.-..++++.+. -+.
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~----idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~ 147 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF----YDSKVELDVFRYLSNINIAPNIIADFP----EGR 147 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC----CCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh----cCHHHHHHHHHHHHhcCCCCCEEEEcC----CCE
Confidence 567778899999998763 5788998865421111 12347888888874 333456665432 378
Q ss_pred EEEeccCCCh
Q 039344 679 VYEYFKMCSL 688 (873)
Q Consensus 679 v~e~~~~~~L 688 (873)
||||++|.++
T Consensus 148 I~efI~G~~l 157 (424)
T 3mes_A 148 IEEFIDGEPL 157 (424)
T ss_dssp EEECCCSEEC
T ss_pred EEEEeCCccC
Confidence 9999998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.33 E-value=0.61 Score=50.42 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=24.6
Q ss_pred eeeCCCCCCCeee------CCCCCeEEeccccccc
Q 039344 728 IVHRDISSKNVLL------DFENEAHVSDFGIAKF 756 (873)
Q Consensus 728 i~H~Dlk~~Nill------~~~~~~kl~Dfg~a~~ 756 (873)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4456799999998863
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=89.70 E-value=0.77 Score=44.08 Aligned_cols=116 Identities=9% Similarity=0.098 Sum_probs=81.3
Q ss_pred cCCceeeEEeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCe
Q 039344 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALSYMHNDCFPPIVHRDISSKNV 738 (873)
Q Consensus 659 ~h~niv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 738 (873)
.||+.++. .+-.+.+.+.+.|+.-+.+ ..+ ..-...+...+++++.+|+...++++++ +|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f----~~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNH--TPF----DNIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTS--EEG----GGGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCccc--CCH----HHHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 58888866 4556667666666654422 222 1123478889999999999999877766 7889999999
Q ss_pred eeCCCCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCc
Q 039344 739 LLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 808 (873)
Q Consensus 739 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~ 808 (873)
+++.++.+++.-.|+...+ +|. ..++..=.-.+=+++..++++++.|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l-----------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-----------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB-----------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC-----------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877754332 222 11222233456688889999999986
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=86.82 E-value=0.44 Score=32.49 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccc
Q 039344 544 PLLGFVALLISLIGLFFKFQRRKN 567 (873)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~ 567 (873)
.+.|++++++++++++++++||+.
T Consensus 17 VVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHHHHHHHHhhhhHh
Confidence 333344444444444555554444
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.53 E-value=0.49 Score=32.16 Aligned_cols=23 Identities=17% Similarity=0.206 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHhhhhhcccc
Q 039344 546 LGFVALLISLIGLFFKFQRRKND 568 (873)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~ 568 (873)
.|+++++++++.++++++||+.+
T Consensus 18 gGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 18 GGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHHHHHhhhhhhh
Confidence 33444444444444444444433
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.79 E-value=2.1 Score=41.18 Aligned_cols=115 Identities=10% Similarity=0.077 Sum_probs=79.8
Q ss_pred cCCceeeEEeEEEecceeEEEEEeccCCChhhHhcccccccCCChHHHHHHHHHHHHHHH-HHHhCCCCCeeeCCCCCCC
Q 039344 659 WHRNIVKVYGFCLHVRHLFIVYEYFKMCSLAVILSNDAAAKNLGWTRRMNMIKGIVDALS-YMHNDCFPPIVHRDISSKN 737 (873)
Q Consensus 659 ~h~niv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~~~i~H~Dlk~~N 737 (873)
.||+. -..+-.+++.+.+.++.-+++.-...+ ...+...+++++.+|+.... +++++ +|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57887 444446677777777765444222222 34788899999999999888 77765 788899999
Q ss_pred eeeCCCCCeEEeccccccccCCCCCCccccccccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCc
Q 039344 738 VLLDFENEAHVSDFGIAKFLKPDSSNWTELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 808 (873)
Q Consensus 738 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDv~s~G~il~el~tg~~P~~ 808 (873)
+++|.++.+++.-.|+-.. ++|.. .++..=.-.+=+++..++.+++.|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~-----------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKES-----------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTT-----------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCccc-----------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987765432 33332 1111223356678888888888876
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=83.68 E-value=0.81 Score=31.05 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=10.9
Q ss_pred ehHHHHHHHHHHHHHHHHhhhhhcc
Q 039344 542 VFPLLGFVALLISLIGLFFKFQRRK 566 (873)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (873)
+..++|+++++++.++++++.|||+
T Consensus 15 a~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 15 ISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhheehhh
Confidence 3444454444444444444444443
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.45 E-value=0.44 Score=52.50 Aligned_cols=64 Identities=6% Similarity=-0.090 Sum_probs=18.8
Q ss_pred CCCceeeecCCeEEEEEEeCC-CcEEEE------EEccCCCCCcchhHHHHHHHHHHHHhccCCceeeEEeEEEe
Q 039344 605 DDEHCIGKGGQGSVYMSKLAS-GEIIAV------KKFHSPLPGEMTFQQEFLNEVKALTEIWHRNIVKVYGFCLH 672 (873)
Q Consensus 605 ~~~~~lg~G~~g~V~~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 672 (873)
.+.+.+| ||.||+|.+.. ...||| |..+..... ......|.+|..+++..+|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccccc-ccccccccccccccccccccccCCCcceEEe
Confidence 3446676 99999998763 357888 665532211 1223568889999999999999999988753
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=69.37 E-value=11 Score=31.13 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=14.4
Q ss_pred ccccCCCCCcEEEccCCCCccccccccCCCCCCCEEEc
Q 039344 135 HSLGNLTNLATLYIYSNSLSASILGKIGNLKSLSNLQL 172 (873)
Q Consensus 135 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 172 (873)
.+|.++.+|+.+.|..+ ++.+...+|.+|.+|+.+.+
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 33444444444444322 22333334444444444433
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=64.78 E-value=13 Score=30.62 Aligned_cols=47 Identities=13% Similarity=0.139 Sum_probs=25.1
Q ss_pred CcccccCCccccCCCCCceEEccCCcccccCCCCccCCCCCCEEEccc
Q 039344 31 NKLSGSIPHSLGNLTNLATLYIHTNSLSGSIPGEIGNFRFFSDLELSN 78 (873)
Q Consensus 31 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 78 (873)
..++.+...+|.+|.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3455555566666666666655543 3324445555555555555543
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=57.38 E-value=4.2 Score=27.25 Aligned_cols=21 Identities=33% Similarity=0.339 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 039344 544 PLLGFVALLISLIGLFFKFQR 564 (873)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~ 564 (873)
.+.|+++++++++.+++++||
T Consensus 19 vv~Gv~ll~~iv~~~~~~~rR 39 (41)
T 2k9y_A 19 VAVGVVLLLVLAGVGFFIHRR 39 (41)
T ss_dssp HHHHHHHHHHHHHHHHSSSSS
T ss_pred hhHHHHHHHHHHHHheeEeee
Confidence 334444333133333444443
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=52.60 E-value=9.6 Score=25.05 Aligned_cols=7 Identities=14% Similarity=0.529 Sum_probs=2.8
Q ss_pred hHHHHHH
Q 039344 543 FPLLGFV 549 (873)
Q Consensus 543 ~~~~~~~ 549 (873)
+++++.+
T Consensus 15 GiVvG~v 21 (38)
T 2k1k_A 15 AVIFGLL 21 (38)
T ss_dssp HHHHHHH
T ss_pred eeehHHH
Confidence 3344433
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=48.52 E-value=5.1 Score=25.64 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhc
Q 039344 544 PLLGFVALLISLIGLFFKFQRR 565 (873)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~ 565 (873)
.++|+++++++..++.++.|||
T Consensus 13 gVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 13 TVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHHHHHhheEEeec
Confidence 3444333333333333444443
No 459
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=42.26 E-value=8.5 Score=26.20 Aligned_cols=32 Identities=13% Similarity=0.026 Sum_probs=21.6
Q ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhcccc
Q 039344 537 IWVVVVFPLLGFVALLISLIGLFFKFQRRKND 568 (873)
Q Consensus 537 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (873)
+...|++.++++++++++...++..+++++++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~kR 44 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVRKR 44 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCSCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhccC
Confidence 44557777777777777777777777666653
No 460
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=32.11 E-value=33 Score=23.30 Aligned_cols=32 Identities=16% Similarity=0.035 Sum_probs=20.6
Q ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhcccc
Q 039344 537 IWVVVVFPLLGFVALLISLIGLFFKFQRRKND 568 (873)
Q Consensus 537 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (873)
+...|++.++++++++++...++..+++++++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 34456666666666667777777777666654
No 461
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=27.96 E-value=58 Score=24.36 Aligned_cols=14 Identities=0% Similarity=0.176 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHHh
Q 039344 547 GFVALLISLIGLFF 560 (873)
Q Consensus 547 ~~~~~~~~~~~~~~ 560 (873)
+++++++.+++++.
T Consensus 24 A~vLfi~GI~iilS 37 (72)
T 2jo1_A 24 AGILFILGILIVLS 37 (72)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc
Confidence 33333333333333
No 462
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=27.70 E-value=17 Score=24.47 Aligned_cols=17 Identities=47% Similarity=0.641 Sum_probs=7.2
Q ss_pred eEEEeehHHHHHHHHHH
Q 039344 537 IWVVVVFPLLGFVALLI 553 (873)
Q Consensus 537 ~~~~v~~~~~~~~~~~~ 553 (873)
.|++++.++.|.+++.+
T Consensus 10 ~wiIi~s~l~GLllL~l 26 (42)
T 2k1a_A 10 IWWVLVGVLGGLLLLTI 26 (42)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34444444444443333
No 463
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=26.53 E-value=63 Score=23.02 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=9.6
Q ss_pred eEEEeehHHHHHHHHHHHHHHH
Q 039344 537 IWVVVVFPLLGFVALLISLIGL 558 (873)
Q Consensus 537 ~~~~v~~~~~~~~~~~~~~~~~ 558 (873)
.|++++.++.|++++.++++++
T Consensus 12 ~wiIi~svl~GLllL~li~~~L 33 (54)
T 2knc_A 12 IWWVLVGVLGGLLLLTILVLAM 33 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4544444444444444333333
No 464
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=26.38 E-value=52 Score=23.41 Aligned_cols=17 Identities=24% Similarity=0.770 Sum_probs=7.1
Q ss_pred EEEeehHHHHHHHHHHH
Q 039344 538 WVVVVFPLLGFVALLIS 554 (873)
Q Consensus 538 ~~~v~~~~~~~~~~~~~ 554 (873)
|++++.++.|++++.++
T Consensus 10 WiIi~svl~GLLLL~Li 26 (54)
T 2l8s_A 10 WVILLSAFAGLLLLMLL 26 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444443333
No 465
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=28.82 E-value=17 Score=23.63 Aligned_cols=12 Identities=42% Similarity=0.609 Sum_probs=5.6
Q ss_pred HHHHHHhhhhhc
Q 039344 554 SLIGLFFKFQRR 565 (873)
Q Consensus 554 ~~~~~~~~~~~~ 565 (873)
.++++++.|+++
T Consensus 24 sLIiLi~~w~qK 35 (39)
T 2l6w_A 24 SLIILIMLWQKK 35 (39)
Confidence 344455555543
No 466
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=22.80 E-value=4.7e+02 Score=29.21 Aligned_cols=84 Identities=17% Similarity=0.194 Sum_probs=49.3
Q ss_pred eeEEeEEEecceeEEEEEeccCCChhhHhcc----------cccccC----CChHHHHHHHHHHH--HHHHHHHhCCCCC
Q 039344 664 VKVYGFCLHVRHLFIVYEYFKMCSLAVILSN----------DAAAKN----LGWTRRMNMIKGIV--DALSYMHNDCFPP 727 (873)
Q Consensus 664 v~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~----------~~~~~~----~~~~~~~~i~~~i~--~~l~~LH~~~~~~ 727 (873)
++.|.+........+ .|++++.++.+.+.. ...... ..++.+..++..+| ..+.|+=.-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 445555555444443 577776555555432 111111 12344445554433 344455432
Q ss_pred eeeCCCCCCCeeeCCCCCeEEecccccc
Q 039344 728 IVHRDISSKNVLLDFENEAHVSDFGIAK 755 (873)
Q Consensus 728 i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 755 (873)
+|=.++|||++.+|++.=+|||.+-
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 6778999999999999999999874
No 467
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=21.55 E-value=1.4e+02 Score=24.66 Aligned_cols=48 Identities=13% Similarity=0.215 Sum_probs=35.1
Q ss_pred hhhhhhhcCCCCCCCCchhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHh
Q 039344 821 NIALDEMLDPRLPTPSRNVHDKLISIVEVTISCVDENPESRPTMQKVCQLL 871 (873)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 871 (873)
...+.++.+++.+.. .++.-..+++.|..+|..+|.++.|+.++.+.|
T Consensus 30 k~~lPEfF~g~~~~k---tpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l 77 (104)
T 2fq3_A 30 VQSLPEFFTNRIPSK---TPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV 77 (104)
T ss_dssp HHHCGGGCCSSCTTS---CHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHS
T ss_pred HHHChHHhcCCCCCC---CHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHc
Confidence 344566666653322 234455689999999999999999999998765
Done!