BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039346
(71 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL------- 56
+R+DT+GDG+++ EL DA K+LGS P R + D +GDG I+ DE
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFISFDEFTDFARAN 75
Query: 57 RELVKYVIK 65
R LVK V K
Sbjct: 76 RGLVKDVSK 84
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+R+DT+GDG+++ EL DA ++LGST A R + D +GDG I+ +E
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+R+DT+GDG+++ EL DA ++LGST A R + D +GDG I+ +E
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell
Death 6 Protein From Leishmania Major Friedlin
Length = 191
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
M W R DTDG G ++ EL A S G F + L D N G I DE ++L
Sbjct: 30 MEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLH 89
Query: 61 KYVIK 65
+++
Sbjct: 90 HFILS 94
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R+ D+ GDGRL E++ A S G +R D G + D+ EL +V
Sbjct: 99 FRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV 158
Query: 64 IK 65
+
Sbjct: 159 CR 160
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 5 RRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELREL 59
+ D DGDG+LTK+E+ FK G A + + ADANGDG I +E E
Sbjct: 12 KLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK----ADANGDGYITLEEFLEF 62
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 5 RRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELREL 59
+ D DGDG+LTK+E+ FK G A + + ADANGDG I +E E
Sbjct: 82 KLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK----ADANGDGYITLEEFLEF 132
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 5 RRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELREL 59
+ D DGDG+LTK+E+ FK G A + + ADANGDG I +E E
Sbjct: 82 KLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK----ADANGDGYITLEEFLEF 132
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DGDG +T EL+ A LG P +R AD + DG +N +E
Sbjct: 12 FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 5 RRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+ D DGDG+LTK+E+ FK G + + ADANGDG I +E
Sbjct: 82 KLMDADGDGKLTKEEVTTFFKKFGYE----KVVDQIMKADANGDGYITLEEF 129
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELREL 59
+R+D +GDG+++ EL +A K+LGS P + D +GDG I+ E +
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQEFTDF 69
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 38.5 bits (88), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
YD DGDG +T +EL +SLG + DA+G+G I+ E ++ ++K
Sbjct: 19 YDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARIMK 77
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 8 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 64
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG + +R AD +GDG +N +E +++
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 11 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 15 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 71
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 14 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 70
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 11 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 12 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 68
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+GDG I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 87 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 87 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 93 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 23 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 68
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 87 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 86 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 142
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 85 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 141
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 15 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 91 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 21 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 66
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+GDG I+ E ++ +K
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 377
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 90 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 95 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 25 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 70
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 36.2 bits (82), Expect = 0.004, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+GDG I+ E ++ +K
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 377
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 344
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 344
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 88 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 18 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 381 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+D DGDG +T +EL +SLG + DA+GDG I+ E
Sbjct: 311 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 360
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 86 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 142
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 353 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 409
Score = 34.7 bits (78), Expect = 0.015, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 283 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 341
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E L+ +K
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 77
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 391 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 321 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 379
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 36.2 bits (82), Expect = 0.004, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+GDG I+ E ++ +K
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 377
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+GDG I+ E ++ +K
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 378
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 34.3 bits (77), Expect = 0.016, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 34.3 bits (77), Expect = 0.016, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 34.3 bits (77), Expect = 0.019, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E ++ +K
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMK 378
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+GDG I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E
Sbjct: 87 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E
Sbjct: 90 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E
Sbjct: 90 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 2 AWLRRYDTDGDGRLTKQELQ------DAFKSLGSTFPAWRAWRALRHADANGDGCINEDE 55
A ++ D +GDG +T ELQ DA+K+L + + ++ AD N DG I+++E
Sbjct: 11 AAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEE 70
Query: 56 L 56
Sbjct: 71 F 71
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D D +G ++ EL+ +LG +R AD +GDG IN DE +++
Sbjct: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E L+ +K
Sbjct: 20 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 78
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G IN
Sbjct: 19 FDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTIN 64
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E
Sbjct: 89 FRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIKR 66
+D DGDG +T +EL +SLG + DA+G+G I+ E L+ +K
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE 78
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
+ +D DG+G ++ EL+ +LG +R AD +GDG IN E V+ +
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN---YEEFVRMM 145
Query: 64 IKR 66
+ +
Sbjct: 146 VSK 148
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIKR 66
+D DGDG +T +EL +SLG + DA+G+G I+ E L+ +K
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE 78
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
+ +D DG+G ++ EL+ +LG +R AD +GDG IN E V+ +
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN---YEEFVRMM 145
Query: 64 IKR 66
+ +
Sbjct: 146 VSK 148
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R +D +GDG +N +E
Sbjct: 90 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R D DG+G ++ EL+ +LG +R AD +GDG +N +E +++
Sbjct: 35 FRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R A+ +GDG +N +E +++
Sbjct: 84 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 140
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 15 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D DG+G ++ EL+ +LG +R A+ +GDG +N +E +++
Sbjct: 89 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+ +D DG+G ++ EL+ +LG +R AD +GDG IN +E
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
M R +D D G+++ + L+ K LG + AD +GDG +NE+E ++
Sbjct: 84 MKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIM 143
Query: 61 K 61
K
Sbjct: 144 K 144
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+DTDG G + +EL+ A ++LG + + D +G G I+ +E +++
Sbjct: 17 FDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMM 70
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAF-KSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +DT+GDG ++ EL++A K LG +R D NGDG ++ +E
Sbjct: 13 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 39 ALRHADANGDGCINEDELRELVKYVI 64
A R D NGDG I+ ELRE ++ ++
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLL 37
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG + +R AD +GDG +N +E
Sbjct: 90 FRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 65
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D D +G ++ EL+ +LG +R AD +GDG IN E VK +
Sbjct: 10 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN---YEEFVKVM 66
Query: 64 IKR 66
+ +
Sbjct: 67 MAK 69
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKS-LGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +DT+GDG ++ EL++A ++ LG +R D NGDG ++ +E
Sbjct: 94 FREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 39 ALRHADANGDGCINEDELRELVKYVI 64
A R D NGDG I+ ELRE ++ ++
Sbjct: 93 AFREFDTNGDGEISTSELREAMRALL 118
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAW-RALRHADANGDGCINEDELREL 59
+A +++D+DG G++T +EL F G T W + L+ D N DG ++ +E E+
Sbjct: 126 LAAFQQFDSDGSGKITNEELGRLF---GVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 60 VKYV 63
++ +
Sbjct: 183 MQKI 186
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SL + DA+G+G I DE L+ +K
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVK 77
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAF-KSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +DT+GDG ++ EL++A K LG +R D NGDG ++ +E
Sbjct: 94 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 39 ALRHADANGDGCINEDELRELVKYVI 64
A R D NGDG I+ ELRE ++ ++
Sbjct: 93 AFREFDTNGDGEISTSELREAMRKLL 118
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SL + DA+G+G I DE L+ +K
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVK 77
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
+ +D D +G ++ EL+ +LG + ++ AD +GDG +N +E +++ V
Sbjct: 89 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 148
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAF-KSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +DT+GDG ++ EL++A K LG +R D NGDG ++ +E
Sbjct: 108 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 161
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 39 ALRHADANGDGCINEDELRELVKYVI 64
A R D NGDG I+ ELRE ++ ++
Sbjct: 107 AFREFDTNGDGEISTSELREAMRKLL 132
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R +D DG+G ++ EL+ +LG +R AD +GDG +N +E
Sbjct: 89 FRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T +EL +SLG + DA+G+G I+
Sbjct: 19 FDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 64
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E L+ +K
Sbjct: 19 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 77
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+ +D DGDG ++ EL+ +LG +R AD +GDG IN +E
Sbjct: 89 FKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEF 141
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D D +G ++ EL+ +LG +R AD +GDG IN E VK +
Sbjct: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN---YEEFVKVM 146
Query: 64 IKR 66
+ +
Sbjct: 147 MAK 149
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+D DGDG +T +EL +SLG + DA+G+G I+ E L+ +K
Sbjct: 20 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 78
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+ +D DG+G ++KQEL A +SLG ++ D +GDG ++ +E L+
Sbjct: 42 FKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
R +D DG+G ++ +L+ +LG +R AD +GDG +N
Sbjct: 13 FRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+D DGDG +T +EL +SL + DA+G+G I DE L+
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D DG+G ++ EL+ LG +R AD +GDG +N E V+ +
Sbjct: 89 FRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVN---YEEFVRVL 145
Query: 64 IKR 66
+ +
Sbjct: 146 VSK 148
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 17/82 (20%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCI--------------- 51
+D DGDG +T +EL +SLG + D +G+G +
Sbjct: 19 FDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKD 78
Query: 52 --NEDELRELVKYVIKRGYALA 71
NE+E+RE + K G
Sbjct: 79 TDNEEEIREAFRVFDKDGNGFV 100
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 71
Query: 63 V 63
V
Sbjct: 72 V 72
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 63 V 63
V
Sbjct: 160 V 160
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 63 V 63
V
Sbjct: 160 V 160
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 63 V 63
V
Sbjct: 160 V 160
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 69
Query: 63 V 63
V
Sbjct: 70 V 70
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+A +++D+DG G++T +EL F W + L+ D N DG ++ +E E++
Sbjct: 400 LAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWH--QVLQECDKNNDGEVDFEEFVEMM 457
Query: 61 KYV 63
+ +
Sbjct: 458 QKI 460
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSL 27
R+ D +GDG+L ++EL + ++ L
Sbjct: 320 FRQLDNNGDGQLDRKELIEGYRKL 343
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 20 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79
Query: 63 V 63
V
Sbjct: 80 V 80
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
+ +D D +G ++ EL+ +LG + ++ AD +GDG +N +E +++ V
Sbjct: 10 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 69
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 15 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 74
Query: 63 V 63
V
Sbjct: 75 V 75
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.3 bits (77), Expect = 0.018, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 4 LRR----YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWR-ALRHADANGDGCINEDELRE 58
LRR +DTD G++TK+EL + F G T + + W L AD N D I+ DE
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLF---GLTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
Query: 59 LV 60
++
Sbjct: 494 MM 495
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+ R +D D G +T ++L+ K LG + AD N D I+EDE ++
Sbjct: 104 LKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 163
Query: 61 K 61
K
Sbjct: 164 K 164
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+DTDG G + +EL+ A ++LG + + D +G G I+ +E
Sbjct: 37 FDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 86
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+ R +D D G +T ++L+ K LG + AD N D I+EDE ++
Sbjct: 12 LKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 71
Query: 61 K 61
K
Sbjct: 72 K 72
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
+ +D D +G ++ EL+ +LG + ++ AD +GDG +N +E +++ V
Sbjct: 15 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 70
Query: 63 V 63
V
Sbjct: 71 V 71
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMKG 159
Query: 63 V 63
V
Sbjct: 160 V 160
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R D +G+G + + EL+ +LG + ++ +GDG IN + ++
Sbjct: 82 FRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDM---- 137
Query: 64 IKRGYALA 71
+ GY LA
Sbjct: 138 LVTGYPLA 145
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 35/89 (39%)
Query: 7 YDTDGDGRLTKQELQDAFKSLG----------------------STF----------PAW 34
+D D DG+++ +EL A +SLG +TF P
Sbjct: 14 FDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKPIKTPTE 73
Query: 35 RAWR---ALRHADANGDGCINEDELRELV 60
++ A R D G+G I E ELR+L+
Sbjct: 74 QSKEMLDAFRALDKEGNGTIQEAELRQLL 102
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALR-HADANGDGCINEDELRELV 60
LR +D +G+G + E++ +LG + + H D+N GCIN +EL +V
Sbjct: 90 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHEDSN--GCINYEELVRMV 145
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALR-HADANGDGCINEDELRELV 60
LR +D +G+G + E++ +LG + + H D+N GCIN +EL +V
Sbjct: 92 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHEDSN--GCINYEELVRMV 147
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 32.0 bits (71), Expect = 0.081, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D+D G+++ EL F W++ L D N DG ++ DE ++++
Sbjct: 424 FRMFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFDEFQQML 478
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 32.0 bits (71), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+D D G+++ + L+ K LG T + D +GDG INE+E
Sbjct: 105 FDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEF 154
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 32.0 bits (71), Expect = 0.090, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D+D G+++ EL F W++ L D N DG ++ DE ++++
Sbjct: 447 FRMFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFDEFQQML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 32.0 bits (71), Expect = 0.092, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R +D+D G+++ EL F W++ L D N DG ++ DE ++++
Sbjct: 448 FRMFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFDEFQQML 502
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+DTDG G + +EL+ A ++LG + + D +G G I+ +E
Sbjct: 39 FDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 88
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + EL+ ++ G T ++ D N DG I+ DE E +K V
Sbjct: 101 FRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 160
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R D + DG + EL+ ++ G T ++ D N DG I+ DE E +K
Sbjct: 100 LFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
Query: 63 V 63
V
Sbjct: 160 V 160
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 7 YDTDGDGRLTKQELQDAFKSL-----GSTFPAWRAWRALRHADA-------NGDGCINED 54
YD + DG + K+E+ D K++ T+P + +H D N DG + D
Sbjct: 101 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 160
Query: 55 ELRE 58
E E
Sbjct: 161 EFLE 164
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
+D D G+++ + L+ K LG T + D +GDG INE+E
Sbjct: 105 FDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 4 LRRYDTDGDGRLTKQELQDAF-----KSLGSTFPAWRAWRALRHADANGDGCINEDELRE 58
R +D D DG +T EL K + R R +R D N DG I+ E E
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSE 187
Query: 59 LVK 61
++K
Sbjct: 188 MMK 190
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKY 62
R +D + DG + +EL + F++ G ++ D N DG I+ DE ++++
Sbjct: 98 LFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
Query: 63 V 63
V
Sbjct: 158 V 158
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG T + D +G G I+ +E
Sbjct: 21 AAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 7 YDTDGDGRLTKQELQDAFKSL-----GSTFPAWRAWRALRHADA-------NGDGCINED 54
YD + DG + K+E+ D K++ T+P + +H D N DG + D
Sbjct: 98 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 157
Query: 55 ELRE 58
E E
Sbjct: 158 EFLE 161
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + +EL + F++ G ++ D N DG I+ DE ++++ V
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGV 158
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG T + D +G G I+ +E
Sbjct: 21 AAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + EL+ ++ G T ++ D N DG I+ DE E +K V
Sbjct: 101 FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMKGV 160
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
+ +D DG G+++ +EL F S+ + D N DG ++ +E E+++
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
Query: 64 IK 65
++
Sbjct: 483 VR 484
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALR-HADANGDGCIN 52
+ R +D +G+G++ EL+ +LG L H D+N GCIN
Sbjct: 90 LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHEDSN--GCIN 140
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 8 DTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
D D G L+ QE+ D K +G + LR D+N G I+
Sbjct: 67 DVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIH 111
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 13/71 (18%)
Query: 1 MAW-LRRYDTDGDGRLTKQEL----QDAFKSLGSTF--------PAWRAWRALRHADANG 47
++W YD + DG +T E+ +K +GS P R + + D N
Sbjct: 101 LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNE 160
Query: 48 DGCINEDELRE 58
DG I DE RE
Sbjct: 161 DGYITLDEFRE 171
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRE 58
R +D+D G+++ EL F W++ L D N DG ++ DE ++
Sbjct: 424 FRXFDSDNSGKISSTELATIFGVSDVDSETWKS--VLSEVDKNNDGEVDFDEFQQ 476
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 7 YDTDGDGRLTKQELQDAFKSL-----GSTFPAWRAWRALRHA-------DANGDGCINED 54
YD + DG +TK+E+ D K++ T+P + +H D N DG + D
Sbjct: 147 YDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTID 206
Query: 55 ELRE 58
E E
Sbjct: 207 EFIE 210
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+ + +D D G+++ + L+ K LG + AD +GDG ++E E ++
Sbjct: 24 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 83
Query: 61 K 61
K
Sbjct: 84 K 84
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 7 YDTDGDGRLTKQELQDAFKSL-----GSTFPAWRAWRALRHADA-------NGDGCINED 54
YD + DG + K+E+ D K++ T+P +H D N DG + D
Sbjct: 98 YDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLD 157
Query: 55 ELRE 58
E E
Sbjct: 158 EFLE 161
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+ + +D D G+++ + L+ K LG + AD +GDG ++E E ++
Sbjct: 82 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141
Query: 61 K 61
K
Sbjct: 142 K 142
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DG G + +EL+ A ++LG + + D G G +N
Sbjct: 15 FDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+ + +D D G+++ + L+ K LG + AD +GDG ++E E ++
Sbjct: 14 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
Query: 61 K 61
K
Sbjct: 74 K 74
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 4 LRRYDTDGDGRLTKQELQDAF-----KSLGSTFPAWRAWRALRHADANGDGCINEDELRE 58
R +D D DG +T EL + + + + +R D NGDG I+ E E
Sbjct: 131 FRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSE 190
Query: 59 LVKYVI 64
++K +
Sbjct: 191 MMKLTL 196
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 12/67 (17%)
Query: 4 LRRYDTDGDGRLTKQELQD----AFKSLGSTF--------PAWRAWRALRHADANGDGCI 51
+ YD D DG +T+ E+ D ++ +G+T P R R D N DG +
Sbjct: 105 FKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKL 164
Query: 52 NEDELRE 58
E +E
Sbjct: 165 TLQEFQE 171
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGS-TFPAWRAWRALRHADANGDGCINEDELRELVK 61
+ +D +GDG + E + + +G A++ AD +G+G I+ E +L+K
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 38 RALRHADANGDGCINEDELRELVKYV 63
RA + DANGDG I+ DE + +++ V
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKV 37
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A L DTDGDG +T + A + G P A +A D +GDG + E E+
Sbjct: 102 AALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEI 154
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A L DTDGDG +T + A + G P A +A D +GDG + E E+
Sbjct: 102 AALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEI 154
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTF------------PAWRAWRALRHADANGDGCINED 54
YD + DG +TK+E+ KS+ PA R D N DG + +
Sbjct: 18 YDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTIE 77
Query: 55 ELRE 58
E E
Sbjct: 78 EFLE 81
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 29.6 bits (65), Expect = 0.48, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 7 YDTDGDGRLTKQELQDAFKSL-----GSTFPAWRAWRALRHADA-------NGDGCINED 54
YD + DG + K+E+ D K++ T+P + +H D N DG + D
Sbjct: 134 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 193
Query: 55 ELRE 58
E E
Sbjct: 194 EFLE 197
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 29.6 bits (65), Expect = 0.48, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R + DG+G ++ +L+ +LG +R A +GDG +N ++ +++
Sbjct: 390 FRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMM 446
Score = 29.3 bits (64), Expect = 0.54, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DGDG +T ++L +SLG + A+G+G I+
Sbjct: 320 FDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTID 365
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGS-----TFPAWRAWRALRHADANGDGCINEDELRE 58
+ D D G + ++EL+ KS + T +A+ L+ AD +GDG I DE
Sbjct: 48 FKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAF--LKAADKDGDGKIGIDEFET 105
Query: 59 LV 60
LV
Sbjct: 106 LV 107
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/61 (19%), Positives = 28/61 (45%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
++D + DG+L+ E ++ + F + D +G+G +N DE ++ +
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM 66
Query: 64 I 64
+
Sbjct: 67 L 67
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
+ + +D D G+++ + L+ K LG + AD +GDG ++E E +
Sbjct: 107 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIX 166
Query: 61 K 61
K
Sbjct: 167 K 167
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+ DTD G +T EL+D K +GS + AD + G I+
Sbjct: 28 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 77
>pdb|4FL4|A Chain A, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
pdb|4FL4|D Chain D, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
pdb|4FL4|G Chain G, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
pdb|4FL4|J Chain J, Scaffoldin Conformation And Dynamics Revealed By A
Ternary Complex From The Clostridium Thermocellum
Cellulosome
Length = 88
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 8 DTDGDGRLTKQEL----QDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
D + DG++ +L + K++ ST P+ +A + +AD N DG +N ++ L +Y+
Sbjct: 24 DVNDDGKVNSTDLTLLKRYVLKAV-STLPSSKAEK---NADVNRDGRVNSSDVTILSRYL 79
Query: 64 IK 65
I+
Sbjct: 80 IR 81
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+ DTD G +T EL+D K +GS + AD + G I+
Sbjct: 15 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 64
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 7 YDTDGDGRLTKQEL----QDAFKSLGSTF--------PAWRAWRALRHADANGDGCINED 54
YD DG+G ++K E+ Q +K + S P R + R D N DG ++ +
Sbjct: 108 YDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLE 167
Query: 55 EL 56
E
Sbjct: 168 EF 169
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D +GDG + +E A + A D +G+G I++ E+ E+V+ +
Sbjct: 69 FRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAI 128
Query: 64 IK 65
K
Sbjct: 129 YK 130
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From
Rat
Length = 624
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
LR+ D + D ++ +EL+D K L A + R D + + ++E+ K +
Sbjct: 17 LRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKML 76
Query: 64 IKRG 67
+R
Sbjct: 77 TQRA 80
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate
Phosphodiesterase Delta Complex With Samarium (Iii)
Chloride
Length = 622
Score = 28.9 bits (63), Expect = 0.76, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
LR+ D + D ++ +EL+D K L A + R D + + ++E+ K +
Sbjct: 15 LRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKML 74
Query: 64 IKRG 67
+R
Sbjct: 75 TQRA 78
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + +EL + ++ G ++ +D N DG I+ DE ++++ V
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG + D +G G I+ +E
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + +EL + ++ G ++ +D N DG I+ DE ++++ V
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 158
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG + D +G G I+ +E
Sbjct: 21 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + +EL + ++ G ++ +D N DG I+ DE ++++ V
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG + D +G G I+ +E
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + +EL + ++ G ++ +D N DG I+ DE ++++ V
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG + D +G G I+ +E
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 28.5 bits (62), Expect = 0.92, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHA-DANGDGCINEDELRELVK 61
+++D DG+G+++ EL F G + W+ + D+N DG ++ +E ++++
Sbjct: 432 FQKFDQDGNGKISVDELASVF---GLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSL 27
R D +GDG+L +QEL D + L
Sbjct: 352 FRHIDKNGDGQLDRQELIDGYSKL 375
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSL------GSTFPAWRAWRALRHADANGDGCINEDEL 56
+ + YD DG+G + K EL D F ++ + P D N DG + +E
Sbjct: 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + +EL + ++ G ++ +D N DG I+ DE ++++ V
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG + D +G G I+ +E
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG + +EL + ++ G ++ +D N DG I+ DE ++++ V
Sbjct: 16 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 75
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 1 MAWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G +T ELQ A + G R R D + DG I+ +E
Sbjct: 102 FAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDYNEF 155
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHA-DANGDGCINEDELRELVK 61
+++D DG+G+++ EL F G + W+ + D+N DG ++ +E ++++
Sbjct: 149 FQKFDQDGNGKISVDELASVF---GLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 204
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSL 27
R D +GDG+L +QEL D + L
Sbjct: 69 FRHIDKNGDGQLDRQELIDGYSKL 92
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 8 DTDGDGRLTKQELQDAFKSLGST---FPAWRAWRALRHADANGDGCINEDELRELVK 61
D D G + ++ELQ K+ S+ + L D +GDG I +E + LVK
Sbjct: 52 DQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKS 26
A+L DTDGDG++ +E Q K+
Sbjct: 85 AFLAAGDTDGDGKIGVEEFQSLVKA 109
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 8 DTDGDGRLTKQELQDAFKSLGST---FPAWRAWRALRHADANGDGCINEDELRELVK 61
D D G + ++ELQ K+ S+ + L D +GDG I +E + LVK
Sbjct: 51 DQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKS 26
A+L DTDGDG++ +E Q K+
Sbjct: 84 AFLAAGDTDGDGKIGVEEFQSLVKA 108
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 3 WLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRA-------LRHADANGDGCINEDE 55
+ + YD DG+G + + EL + K++ + A A D NGDG ++ +E
Sbjct: 93 YFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEE 152
Query: 56 LRELVK 61
E V+
Sbjct: 153 FMEGVQ 158
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 4 LRRYDTDGDGRLTKQELQ---DAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R D D G + + EL+ F+S A L AD +GDG I +E +E+V
Sbjct: 47 FRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMV 106
Query: 61 K 61
+
Sbjct: 107 Q 107
>pdb|1CLC|A Chain A, Three-Dimensional Structure Of Endoglucanase D At 1.9
Angstroms Resolution
Length = 639
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 8 DTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
D + DG++ +L + + + +A ++AD N DG +N ++ L +Y+I+
Sbjct: 575 DVNDDGKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADVNRDGRVNSSDVTILSRYLIR 632
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
A +D DG G ++ +EL + LG + D +G G I+ +E
Sbjct: 13 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
>pdb|4IHA|A Chain A, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IHA|B Chain B, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IH9|A Chain A, Crystal Structure Of Rice Dwarf14 (d14)
pdb|4IH9|B Chain B, Crystal Structure Of Rice Dwarf14 (d14)
Length = 268
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 8 DTDGDGRLTKQELQDAFKSLGSTFPAW 34
D+D G +E+Q F ++G+ + AW
Sbjct: 129 DSDYHGGFELEEIQQVFDAMGANYSAW 155
>pdb|3W04|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W04|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W05|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
pdb|3W05|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
Length = 266
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 8 DTDGDGRLTKQELQDAFKSLGSTFPAW 34
D+D G +E+Q F ++G+ + AW
Sbjct: 127 DSDYHGGFELEEIQQVFDAMGANYSAW 153
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG L +E A + + A D +G+G I+++E+ E+V +
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 64 IK 65
K
Sbjct: 129 FK 130
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCIN 52
+D DG G + +EL+ A ++LG + + D G G +N
Sbjct: 40 FDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG L +E A + + A D +G+G I+++E+ E+V +
Sbjct: 70 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
Query: 64 IK 65
K
Sbjct: 130 FK 131
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG L +E A + + A D +G+G I+++E+ E+V +
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 64 IK 65
K
Sbjct: 129 FK 130
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYV 63
R +D + DG L +E A + + A D +G+G I+++E+ E+V +
Sbjct: 69 FRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Query: 64 IK 65
K
Sbjct: 129 FK 130
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 4 LRRYDTDGDGRLTKQELQ---DAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R D D G L ++EL+ F+S + AD +GDG I +E +E+V
Sbjct: 48 FRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVK 61
A +D DG G ++ +EL + LG + D +G G I+ +E LV
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LVM 81
Query: 62 YV 63
V
Sbjct: 82 MV 83
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 4 LRRYDTDGDGRLTKQELQ---DAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
R D D G L EL+ F+S + AD +GDG I DE +E+V
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 4 LRRYDTDGDGRLTKQEL------QDAF--KSLGSTFPAWRAWRALRHADANGDGCINEDE 55
L+ +D++ DG+L E+ Q+ F K G +A D +G+G I+E+E
Sbjct: 153 LKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENE 212
Query: 56 LRELVK 61
L L+K
Sbjct: 213 LDALLK 218
Score = 25.4 bits (54), Expect = 7.5, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 1 MAWLRRYDTDGDGRLTKQELQD--------AFKSLGSTFPAWRAWRALRHADANGDGCIN 52
M R+YDTD G + +EL++ A K++ T A L+ D+N DG +
Sbjct: 106 MKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLE 165
Query: 53 EDELRELV 60
E+ L+
Sbjct: 166 LTEMARLL 173
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINED 54
+D D D +LT +EL ++LG+ + ++ D + G +++
Sbjct: 23 FDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQE 70
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 7 YDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVKYVIK 65
+DT+ G + EL+ A ++LG + D G+G I D+ +++ IK
Sbjct: 16 FDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEKIK 74
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRA-----LRHADANGDGCINEDELRE 58
+YD +GDG+L+K+EL+ + + FP+ + D NGDG ++ +E +
Sbjct: 11 FEKYDKEGDGQLSKEELKLLLQ---TEFPSLLKGMSTLDELFEELDKNGDGEVSFEEFQV 67
Query: 59 LVKYV 63
LVK +
Sbjct: 68 LVKKI 72
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R YD +G+G ++ +++ L T + + DA+G G ++ +E
Sbjct: 9 FRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 2 AWLRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELVK 61
A +D DG G ++ +EL + LG + D +G G I+ +E LV
Sbjct: 24 AAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEF--LVM 81
Query: 62 YV 63
V
Sbjct: 82 MV 83
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDEL 56
R YD +G+G ++ +++ L T + + DA+G G ++ +E
Sbjct: 97 FRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 149
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 7 YDTDGDGRLTKQELQDAFK-SLGSTFPAWR----AWRALRHADANGDGCIN 52
YD D DG++++ E+ + +G + A R ++ AD +GDG ++
Sbjct: 123 YDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVS 173
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 15 LTKQELQDAFKSLGSTFPAWRAWRALRHADANGDGCINEDELRELV 60
LTK EL+D ++ L R D N DG + +E++E++
Sbjct: 79 LTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEII 124
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 4 LRRYDTDGDGRLTKQELQDAFKSLG 28
R +D +G G + K LQDA +LG
Sbjct: 85 FRTFDPEGTGYIPKAALQDALLNLG 109
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,580,961
Number of Sequences: 62578
Number of extensions: 92469
Number of successful extensions: 825
Number of sequences better than 100.0: 205
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 373
Number of HSP's gapped (non-prelim): 486
length of query: 71
length of database: 14,973,337
effective HSP length: 41
effective length of query: 30
effective length of database: 12,407,639
effective search space: 372229170
effective search space used: 372229170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)