BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039361
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STJ6|BH126_ARATH Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126
PE=2 SV=1
Length = 221
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 76 SDNNNNKKMILRKDIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLN 135
+D+N KK +L +DIERQRRQ ++ L A+LR+ LPL+ I GKR++SDH+N A N+I
Sbjct: 36 TDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTE 95
Query: 136 KNIQELGLKRDKLKNLSELGA-----VGHGSSNWDNCLQNCVTIHPYSGGVEIVINS-VH 189
I+EL +RD+L + G G S+ V + P+ G+E+V++S
Sbjct: 96 ARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSS 155
Query: 190 KEENLKLSKVMEAVLEEGLDVIRCASTQTDEGFFHTIQAEESQVGDLTCVDLRVLQLKL 248
E L LSKV+E + E+GL+V+ +T+ ++ HTIQ E + G C+DL LQ KL
Sbjct: 156 GPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQVEVNSFG---CIDLLWLQQKL 211
>sp|Q9STJ7|BH118_ARATH Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118
PE=2 SV=1
Length = 163
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 8/157 (5%)
Query: 85 ILRKDIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLK 144
++ K+IE++RRQ ++ L+ASLRSLLPL+ I GKRS SD + A NYI+YL +NI+++ K
Sbjct: 4 LVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSK 63
Query: 145 RDKLKNLSELGAVGHGSSNWDNCLQNCVTIHPYSGGVEIVINSVHKEENLKLSKVMEAVL 204
RD L LS W N + N V I P G+EIV++ + S V++ +
Sbjct: 64 RDDLVLLSGRSFRSSNEQEW-NEISNHVVIRPCLVGIEIVLSILQT----PFSSVLQVLR 118
Query: 205 EEGLDVIRCASTQTDEGFFHTIQAEESQVGDLTCVDL 241
E GL V+ + ++ HT+QAE V DL +DL
Sbjct: 119 EHGLYVLGYICSSVNDRLIHTLQAE---VNDLALIDL 152
>sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2
SV=1
Length = 174
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 85 ILRKDIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLK 144
++ ++ ERQRRQ ++ L+ASLRSLLPL I GKRS SD +NEA NYI YL + I+EL ++
Sbjct: 4 MMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSVR 63
Query: 145 RDKLKNLSELGAVGHGSSNWDNCLQ-----NCVTIHPYSGGVEIVINSVHKEENLKLSKV 199
RD L LS +G + ++ ++ N V + GVEI+++S + S V
Sbjct: 64 RDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQPRFSSV 123
Query: 200 MEAVLEEGLDVIRCASTQTDEGFFHTIQAEESQVG---DLTCVDLRVLQLK 247
++ + E GL ++ S+ D+ +TIQAE + + DL ++ R++++K
Sbjct: 124 LQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRMK 174
>sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120
PE=2 SV=2
Length = 204
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 11/178 (6%)
Query: 77 DNNNNKKMILRKDIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNK 136
D +K +L ++IERQRRQ +++L ASLRS LPL+ I GKR++SDH+N A ++I
Sbjct: 21 DETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQT 80
Query: 137 NIQELGLKRDKLKNLSELGAVGHGSSNWDNCLQN-----CVTIHPYSGGVEIVINSVHKE 191
I++L +RD+LK E+G + + + V + P G E+V++S+
Sbjct: 81 RIKDLSARRDELKR--EIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVVVSSLASG 138
Query: 192 -ENLKLSKVMEAVLEEGLDVIRCASTQTDEGFFHTIQAEESQVGDLTCVDLRVLQLKL 248
E LS+V+E + +GL+VI + + +E +TIQ E V C DL LQ KL
Sbjct: 139 LEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQVE---VNSFDCFDLAWLQQKL 193
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 52 SSKMGKGQQHKLLFVATTKVNDGN-SDNNNNKKMILRKDIERQRRQHLSMLHASLRSLLP 110
++K+G + + L T N+ N +D++ K + +DIERQRRQ +S L LR+LLP
Sbjct: 42 TNKIGGSNKKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLP 101
Query: 111 LQSITGKRSISDHINEARNYINYLNKNIQELGLKRDKLKNLSELGAVGHGS--------- 161
Q I GKRS SDHI +A NYI L I+EL KR+++K + H +
Sbjct: 102 FQYIQGKRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLS 161
Query: 162 -------SNWDNCLQN---CVTIHPYSGGVEIVINSVHKEENLKLSKVMEAVL-EEGLDV 210
S+ +C+ + V + P GVEI+I+ LS V++ + E+ V
Sbjct: 162 SSAASTLSSSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSV 221
Query: 211 IRCASTQTDEGFFHTIQAEESQVGD 235
+ C S + + F HTI SQV D
Sbjct: 222 VSCLSARRQQRFMHTIV---SQVED 243
>sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2
SV=1
Length = 257
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 13/182 (7%)
Query: 58 GQQHKLLFVATTKVNDGNSDNNNNKKMILRKDIERQRRQHLSMLHASLRSLLPLQSITGK 117
G+Q+ + +++ G+ + N + K++ERQRRQ + L LR LLP Q I GK
Sbjct: 52 GRQNCETTMTLSEIMKGDDEPKNKRAK--HKELERQRRQENTSLFKILRYLLPSQYIKGK 109
Query: 118 RSISDHINEARNYINYLNKNIQELGLKRDKLK-NLSELGAVGHGS-----SNWDNCLQN- 170
RS +DH+ EA NYI L K I+E+ KRD++K +++ + G S S+ +C+ +
Sbjct: 110 RSSADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDT 169
Query: 171 --CVTIHPYSGGVEIVINSVHKEENLKLSKVMEAVL-EEGLDVIRCASTQTDEGFFHTIQ 227
V + P G+EIV++ ++ E+ LS V++ + E+ +++ C ST+ +GF HTI
Sbjct: 170 NIAVVVRPCLIGLEIVVSCCNRHESC-LSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIA 228
Query: 228 AE 229
+E
Sbjct: 229 SE 230
>sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1
Length = 253
Score = 38.1 bits (87), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 72 NDGNSDNNNNKKMILRK----DIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEA 127
++GN +NN ++++K ER RR+ ++ L +SLRS LP + K SI + ++++
Sbjct: 59 SEGNEIDNN--PVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKS 116
Query: 128 RNYINYLNKNIQELGLKRDKL 148
YI L + ++ L K++++
Sbjct: 117 LKYIPELQQQVKRLIQKKEEI 137
>sp|Q9ZVB5|BH100_ARATH Transcription factor bHLH100 OS=Arabidopsis thaliana GN=BHLH100
PE=2 SV=1
Length = 242
Score = 37.7 bits (86), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 91 ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNI 138
ER+RR+ ++ + +SLRS LP + T K S+S +++A YI L + +
Sbjct: 70 ERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQV 117
>sp|Q9FYE6|BH101_ARATH Transcription factor bHLH101 OS=Arabidopsis thaliana GN=BHLH101
PE=2 SV=1
Length = 240
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 91 ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRDKL 148
ER RR+ L+ L++SLR+LLPL K SI + YI + +Q L ++++L
Sbjct: 74 ERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQRLSRRKEEL 131
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 78 NNNNKKMILRKDI-----ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYIN 132
+N K + R+D+ ER+RR+ L+ +LRS++P + K SI + + Y+N
Sbjct: 350 DNTKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSI---LGDTIAYVN 406
Query: 133 YLNKNIQEL 141
+L K + EL
Sbjct: 407 HLRKRVHEL 415
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 34.3 bits (77), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 89 DIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRD-- 146
+ ERQRR+ L+ SLR+++P S K S+ + +A +YIN L +Q+ ++
Sbjct: 418 EAERQRREKLNQRFYSLRAVVPNVSKMDKASL---LGDAISYINELKSKLQQAESDKEEI 474
Query: 147 --KLKNLSELGAVGHG 160
KL +S+ G G G
Sbjct: 475 QKKLDGMSKEGNNGKG 490
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 89 DIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRDKL 148
+ ERQRR+ L+ +LRS++P S K S+ + +A +YIN L+ ++ + +R++L
Sbjct: 436 EAERQRREKLNQRFYALRSVVPNISKMDKASL---LGDAVSYINELHAKLKVMEAERERL 492
Query: 149 KNLSELGAVGHGSSNWDNCLQNCVTIHPYSGGVEIVINSVHKEENLKLSKVMEAVLEEGL 208
G+ SSN L + + + V + IN E+ S++ A E +
Sbjct: 493 ---------GY-SSNPPISLDSDINVQTSGEDVTVRINC--PLESHPASRIFHAFEESKV 540
Query: 209 DVIRCASTQTDEGFFHT--IQAEE 230
+VI + + HT +++EE
Sbjct: 541 EVINSNLEVSQDTVLHTFVVKSEE 564
>sp|Q9M1K0|ORG3_ARATH Transcription factor ORG3 OS=Arabidopsis thaliana GN=ORG3 PE=1 SV=1
Length = 258
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 60 QHKLLFVATTKVNDGNSDNNNNKKMILRK----DIERQRRQHLSMLHASLRSLLPLQSIT 115
QH+ F + ++GN +NN ++++K ER RR+ ++ L +SLRS LP +
Sbjct: 53 QHQNSFGVSVS-SEGNEIDNN--PVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQS 109
Query: 116 GKRSISDHINEARNYINYLNKNI 138
K SI ++ + YI L + +
Sbjct: 110 KKLSIPATVSRSLKYIPELQEQV 132
>sp|P38422|DACF_BACSU D-alanyl-D-alanine carboxypeptidase DacF OS=Bacillus subtilis
(strain 168) GN=dacF PE=2 SV=2
Length = 389
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 130 YINYLNKNIQELGLKRDKLKNLSELGAVGHGSSNWDNCL 168
++ +NK +ELGLK KN + L GH SS +D +
Sbjct: 143 FVKKMNKKAKELGLKNTSFKNPTGLTEEGHYSSAYDMAI 181
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 36 QDQILQGQALLERNINSSKMGKGQQHKLLFVATTKVNDGNSDNNNNKKMILRKDIERQRR 95
+ + +Q Q E +I + K ++ + T+ ++ + ++ I+ K ER+RR
Sbjct: 231 ETEPVQRQPATETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRR 290
Query: 96 QHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGL 143
Q ++ + +L+ LLP + T + S+ D + E Y+ L IQ +
Sbjct: 291 QKINEMMKALQELLPRCTKTDRSSMLDDVIE---YVKSLQSQIQMFSM 335
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 91 ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRDKLKN 150
ER+RR+ L+ + L+SLLP K SI + E Y+ L + +QEL R+
Sbjct: 423 ERKRREKLNEMFLVLKSLLPSIHRVNKASI---LAETIAYLKELQRRVQELESSREPASR 479
Query: 151 LSE 153
SE
Sbjct: 480 PSE 482
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 91 ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRDKLKN 150
ER+RR+ L+ + L+SLLP K SI + E Y+ L + +QEL R+
Sbjct: 421 ERKRREKLNEMFLVLKSLLPSIHRVNKASI---LAETIAYLKELQRRVQELESSREPASR 477
Query: 151 LSE 153
SE
Sbjct: 478 PSE 480
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 20/134 (14%)
Query: 9 VLVHQFEHSDDPFPFHYNPYQEHSNIQQDQILQGQALLERNINSSKM-GKGQQHKLLFVA 67
+ V Q E P YNP + + G++ SSK+ +G F
Sbjct: 33 LCVMQLEQGMRPISRCYNPTAYSTTM-------GRSFFAGAATSSKLFSRG------FSV 79
Query: 68 TTKVNDGNSDNNNNKKMILRKDIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEA 127
T + S KK D ER+RR ++ A+LR++LP K S+ + E
Sbjct: 80 TKPKSKTESKEVAAKK---HSDAERRRRLRINSQFATLRTILPNLVKQDKASV---LGET 133
Query: 128 RNYINYLNKNIQEL 141
Y N L K +Q++
Sbjct: 134 VRYFNELKKMVQDI 147
>sp|Q5M7W4|TMC5_RAT Transmembrane channel-like protein 5 OS=Rattus norvegicus GN=Tmc5
PE=2 SV=2
Length = 965
Score = 32.0 bits (71), Expect = 4.1, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 38 QILQGQALLERNINSSKMGKGQQHKLLFVATTKVNDGNSDNNNNKKMILRKDIERQRRQH 97
QI +G+ ++ R ++ + +G+ L TK+ D N + ++ R+++E+Q H
Sbjct: 883 QITEGRKVMIRLLHEQIINEGKDKMFLIEKLTKLQDIERRANPSTLVLERREVEQQSPLH 942
Query: 98 LSMLHAS 104
L L A+
Sbjct: 943 LEELDAA 949
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 89 DIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRDKL 148
+ ERQRR+ L+ +LR+++P S K S+ + +A YIN L + + ++ ++
Sbjct: 455 EAERQRREKLNQRFYALRAVVPNVSKMDKASL---LGDAIAYINELKSKVVKTESEKLQI 511
Query: 149 KN-LSELG---AVGHGSSNWDNCLQNCVTIHPYSGGVEI-------VINSVHKEENLKLS 197
KN L E+ A S++ + +C +I P +E+ +I + N +
Sbjct: 512 KNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAA 571
Query: 198 KVMEAVLEEGLDV 210
++M A+++ L+V
Sbjct: 572 RLMSALMDLELEV 584
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 91 ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQEL 141
ER+RR HL+ + +L+ L+P S + SI + + +YIN L + + EL
Sbjct: 219 ERERRCHLNERYEALKLLIPSPSKGDRASI---LQDGIDYINELRRRVSEL 266
>sp|Q16559|TAL2_HUMAN T-cell acute lymphocytic leukemia protein 2 OS=Homo sapiens GN=TAL2
PE=2 SV=1
Length = 108
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 91 ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKR 145
ER R+Q+++ A LR L+P K S ++ + A YIN+L K + E L++
Sbjct: 11 ERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQQ 65
>sp|P54883|SEX3_MYCLE Sensor-like histidine kinase senX3 OS=Mycobacterium leprae (strain
TN) GN=senX3 PE=3 SV=1
Length = 443
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 93 QRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRDK 147
+RRQ L+ A + L LQ I + + + + YLN+ +ELGL RD+
Sbjct: 34 ERRQRLANEWAGITVLQMLQRIIALMPLGAAVVDTYRDVVYLNEQAKELGLVRDR 88
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 31.2 bits (69), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 89 DIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQELGLKRDKL 148
+ ERQRR+ L+ SLR+++P S K S+ + +A +YI+ L +Q+ +++L
Sbjct: 419 EAERQRREKLNQRFYSLRAVVPNVSKMDKASL---LGDAISYISELKSKLQKAESDKEEL 475
Query: 149 K 149
+
Sbjct: 476 Q 476
>sp|O93507|TAL1_DANRE T-cell acute lymphocytic leukemia protein 1 homolog OS=Danio rerio
GN=tal1 PE=1 SV=1
Length = 324
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 50 INSSKMGKGQQHKLLFVATTKVNDGNSD---NNNNKKMILRK----DIERQRRQHLSMLH 102
INS G +Q+ + K + N+ ++ I+R+ ER R+Q+++
Sbjct: 146 INSGFAGDAEQYGMYPSNRVKRRPAPYEVEINDGSQPKIVRRIFTNSRERWRQQNVNGAF 205
Query: 103 ASLRSLLPLQSITGKRSISDHINEARNYINYLNK 136
A LR L+P K S ++ + A YIN+L K
Sbjct: 206 AELRKLIPTHPPDKKLSKNEILRLAMKYINFLAK 239
>sp|Q9NX45|SOLH2_HUMAN Spermatogenesis- and oogenesis-specific basic
helix-loop-helix-containing protein 2 OS=Homo sapiens
GN=SOHLH2 PE=2 SV=2
Length = 425
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 64 LFVATTKVNDGN--------SDNNNNKKM-ILRKDIERQRRQHLSMLHASLRSLLPLQSI 114
LF + + +GN S+ NKK+ +L E+ RR+ + LR+LLP +
Sbjct: 174 LFACSESLRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRERIKYCCEQLRTLLPY--V 231
Query: 115 TGKRSISDHINEAR-NYINYLNKNI 138
G+++ + + EA +Y+ Y+ + I
Sbjct: 232 KGRKNDAASVLEATVDYVKYIREKI 256
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 91 ERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNKNIQEL 141
E++RR+ L+ +LRS++P S K SI D E Y+ L K +QEL
Sbjct: 410 EKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIE---YLQDLQKRVQEL 457
>sp|P17542|TAL1_HUMAN T-cell acute lymphocytic leukemia protein 1 OS=Homo sapiens GN=TAL1
PE=1 SV=2
Length = 331
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 83 KMILRKDIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINYLNK---NIQ 139
+ I ER R+Q+++ A LR L+P K S ++ + A YIN+L K + +
Sbjct: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE 247
Query: 140 ELGLKRDK 147
E G +R K
Sbjct: 248 EEGTQRAK 255
>sp|P22091|TAL1_MOUSE T-cell acute lymphocytic leukemia protein 1 homolog OS=Mus musculus
GN=Tal1 PE=1 SV=1
Length = 329
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 76 SDNNNNK--KMILRKDIERQRRQHLSMLHASLRSLLPLQSITGKRSISDHINEARNYINY 133
SD + K + I ER R+Q+++ A LR L+P K S ++ + A YIN+
Sbjct: 179 SDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINF 238
Query: 134 LNK---NIQELGLKRDK 147
L K + +E G +R K
Sbjct: 239 LAKLLNDQEEEGTQRAK 255
>sp|A0PT40|DXS_MYCUA 1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium ulcerans
(strain Agy99) GN=dxs PE=3 SV=1
Length = 637
Score = 30.8 bits (68), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 19/122 (15%)
Query: 121 SDHINEARNYINYLNKNIQELGLKRDKLKNLSELGAVGHGSSNWDNCLQNCVTIHPYSGG 180
S H + A +Y + L+K + GL+ N + VG G+ C + I
Sbjct: 111 SSHASAALSYADGLSKAFELSGLR-----NRHVVAVVGDGALTGGMCWEALNNIAASHRP 165
Query: 181 VEIVINSVHKE------------ENLKLSKVMEAVLEEGLDVIRCAS--TQTDEGFFHTI 226
V IV+N + L+L E VLE+G DV+R + F H++
Sbjct: 166 VVIVVNDNGRSYAPTIGGVADHLAKLRLQPAYEQVLEKGRDVVRAVPLVGEVCYHFMHSV 225
Query: 227 QA 228
+A
Sbjct: 226 KA 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,572,358
Number of Sequences: 539616
Number of extensions: 3606783
Number of successful extensions: 17413
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 17077
Number of HSP's gapped (non-prelim): 413
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)