BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039363
(521 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84MA8|AZG2_ARATH Adenine/guanine permease AZG2 OS=Arabidopsis thaliana GN=AZG2 PE=2
SV=1
Length = 530
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/516 (72%), Positives = 435/516 (84%), Gaps = 2/516 (0%)
Query: 1 MEKGLNEAVSKSFIGKHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCS 60
M+K LN+ VSKSFIG+ FKLE RK+ FT ELRA TATFLTMAYIITVNA I+ADSG TCS
Sbjct: 14 MKKHLNDTVSKSFIGRFFKLEARKTTFTTELRAATATFLTMAYIITVNANILADSGATCS 73
Query: 61 VADCS-VPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLG 119
+ DCS V + P+C L N GYE C+++ + DL+VAT LSAM+GS AMG+LANLP G
Sbjct: 74 INDCSTVASSSPPGPECVLGSNPGYEQCISRVKKDLVVATSLSAMVGSLAMGLLANLPFG 133
Query: 120 LAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPV 179
LAPGMGANAY+AYN+VGF GSGSISY TAMA+VL+EGCAFLA+SA GLR +LARLIPQ V
Sbjct: 134 LAPGMGANAYIAYNVVGFRGSGSISYHTAMAIVLLEGCAFLAVSALGLRGKLARLIPQTV 193
Query: 180 RLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFW 239
RLACA GIG+FIAFVGLQ++QG+GLVGPD STL+T+TACA+ DPVTGAC+GGKM+SPTFW
Sbjct: 194 RLACAVGIGMFIAFVGLQMNQGIGLVGPDKSTLVTLTACAETDPVTGACLGGKMKSPTFW 253
Query: 240 LGLAGFLITCYGLMKEIKGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVD 299
L + GFLIT +GLMK +KGSMIYGI+FVT ISWIRGT VT FPH+P GD+NYNYF KIVD
Sbjct: 254 LAVVGFLITSFGLMKNVKGSMIYGIVFVTAISWIRGTQVTIFPHTPLGDSNYNYFTKIVD 313
Query: 300 FHKIQSTAGVISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEY 359
FHKIQST G ISFT F SEVWVA ATL YVD+L TTG LYTMAEIGGFV E GKFEGEY
Sbjct: 314 FHKIQSTLGAISFTEFRKSEVWVAFATLFYVDLLGTTGVLYTMAEIGGFV-EDGKFEGEY 372
Query: 360 IAYMVDASSTIVGSALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTS 419
AY+VDA S++VGSALGV+ AT+VESSAG++EGG+TGLTAVIVGLYF S+FFTPL+T+
Sbjct: 373 AAYLVDAGSSVVGSALGVTTTATFVESSAGLKEGGKTGLTAVIVGLYFLASMFFTPLVTN 432
Query: 420 VPPWAVGPSLVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYI 479
VP WAVGPSLVMVGVMMM VVKDI WG K AV AFVTILLMPLTYSIA GII GIG+Y+
Sbjct: 433 VPRWAVGPSLVMVGVMMMGVVKDIRWGETKEAVTAFVTILLMPLTYSIANGIIAGIGIYL 492
Query: 480 ALSLYDCVVGLVRCFLKLRRMVAKEQNQVSAAAGVD 515
ALS+YD V+G+ + +R+ V +E NQVS+ A V+
Sbjct: 493 ALSMYDVVLGVAKWLNGVRKRVMREHNQVSSVATVE 528
>sp|Q9SRK7|AZG1_ARATH Adenine/guanine permease AZG1 OS=Arabidopsis thaliana GN=AZG1 PE=2
SV=1
Length = 579
Score = 599 bits (1544), Expect = e-170, Method: Compositional matrix adjust.
Identities = 301/556 (54%), Positives = 389/556 (69%), Gaps = 42/556 (7%)
Query: 5 LNEAVSKSFIGKHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADC 64
LN V S +GK FKL R S FT ELRAGTATFLTMAYI+ VNA+I++DSGGTCSV+DC
Sbjct: 24 LNTYVGSSRVGKRFKLAERNSTFTTELRAGTATFLTMAYILAVNASILSDSGGTCSVSDC 83
Query: 65 -------SVPMNQTASP---------DCTLKP-NVGYENCLAKTRSDLIVATVLSAMIGS 107
++ +Q P C P N GY C+ + R DLIVATV +++IG
Sbjct: 84 IPLCSNPAIEPSQCTGPGLRLIQPDVSCKFNPVNPGYAACVEEIRKDLIVATVAASLIGC 143
Query: 108 FAMGILANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGL 167
MG++ANLPL LAPGMG NAY AY +VGFHGSGSISY+TA+A V +EG FL ISA G
Sbjct: 144 VIMGLMANLPLALAPGMGTNAYFAYTVVGFHGSGSISYRTALAAVFIEGLIFLFISAIGF 203
Query: 168 RAQLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGA 227
RA+LA+L+P+PVR++ +AGIGLF+AF+GLQ +QG+GLVG PSTL+T+ AC + ++ A
Sbjct: 204 RAKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLVGYSPSTLVTLAACPASSRISLA 263
Query: 228 -----------------------CIGGKMRSPTFWLGLAGFLITCYGLMKEIKGSMIYGI 264
CI G+M SPTFWLG+ GF+I Y L+K +KG+MIYGI
Sbjct: 264 PVITSANGTVSLLAGGSVSGDIMCIHGRMESPTFWLGIVGFVIIAYCLVKNVKGAMIYGI 323
Query: 265 LFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVAL 324
+FVT +SW R T VT FP++ GDA ++YF+KIVD H I+ TAG +SF+ N W AL
Sbjct: 324 VFVTAVSWFRNTEVTAFPNTSAGDAAHDYFKKIVDVHVIKHTAGALSFSGINKGHFWEAL 383
Query: 325 ATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYV 384
T LYVD+L TTGTLY+MA GFV+E+G F G+Y A+M DAS+ ++GS LG SP+ ++
Sbjct: 384 VTFLYVDILDTTGTLYSMARFAGFVDEKGDFAGQYFAFMSDASAIVIGSLLGTSPVTVFI 443
Query: 385 ESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMVGVMMMKVVKDID 444
ESS GIREGGRTGLTA+ V +YF +++FFTPLL S+P WAVGP L++VGVMMMK V +ID
Sbjct: 444 ESSTGIREGGRTGLTAITVAVYFLLAMFFTPLLASIPAWAVGPPLILVGVMMMKSVTEID 503
Query: 445 WGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSLYDC-VVGLVRC-FLKLRRMVA 502
W ++ A+PAFVT++LMPLTYS+AYG+IGGIG Y+ L L+D GLV+ FLK +
Sbjct: 504 WEDMREAIPAFVTMILMPLTYSVAYGLIGGIGSYVVLHLWDWGEEGLVKLGFLKRKVKEE 563
Query: 503 KEQNQVSAAAGVDPSI 518
N V A+ +D ++
Sbjct: 564 DNNNGVVKASEIDTTV 579
>sp|O94300|YOOH_SCHPO Putative xanthine/uracil permease C887.17 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC887.17 PE=3 SV=1
Length = 625
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/512 (41%), Positives = 312/512 (60%), Gaps = 24/512 (4%)
Query: 9 VSKSFIGKHFKLE------VRK-SCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSV 61
V++S G+ F+LE RK S F+ E+ AG TF MAYI+ VNATI+ D+GGTC
Sbjct: 18 VARSAFGRWFRLEGCGHPRERKGSRFSLEISAGLTTFFAMAYILAVNATILVDTGGTC-- 75
Query: 62 ADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLA 121
+C+ + DC + Y C DL+ AT + + SF MG+ AN+P+G+A
Sbjct: 76 -ECT----EANRDDCDKLDD--YVLCKEDFHRDLVTATAAISALASFCMGLFANMPVGMA 128
Query: 122 PGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRL 181
PGMG NAY AY +VG++G+G +SY+ A+ V VEG F ++ GLR LAR+IP ++
Sbjct: 129 PGMGLNAYFAYQVVGYNGTGRVSYREALLAVFVEGFIFTGLTVIGLRQWLARVIPASLKF 188
Query: 182 ACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACA-DNDPVTGACIGGKMRSPTFWL 240
A AGIGL++ +GL G+G++G S ++ + C + +C G +++S W+
Sbjct: 189 ATGAGIGLYLTIIGLSPSAGLGVIGHSSSDIVALGGCPPEYLNADYSCNGHQLQSGRMWV 248
Query: 241 GL-AGFLITCYGLMKEIKGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVD 299
G+ G ++T +M + KG+++ GI VT+ SW R + VT FPH+ GD N+++F+K+V
Sbjct: 249 GIFCGGVLTAILMMYKFKGAVLAGIALVTITSWPRRSLVTMFPHTLTGDYNFDFFKKVVS 308
Query: 300 FHKIQSTAGVISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGK-FEGE 358
F KI V N + +AL T LYVD++ TGTLY+MA G V+ + + FEG
Sbjct: 309 FRKINRIL-VAQQWNVTGGQFAIALITFLYVDIMDMTGTLYSMANYAGLVDPRTQDFEGS 367
Query: 359 YIAYMVDASSTIVGSALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLT 418
+AY+VDA S +GS G SP+ ++ES +GI GGRTG+ ++VG+ FFISLFF P+ +
Sbjct: 368 AVAYIVDALSISIGSLFGCSPVTAFIESGSGISAGGRTGILGMVVGICFFISLFFAPIFS 427
Query: 419 SVPPWAVGPSLVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLY 478
S+P WA G +LV+VG MMMK I+W + ++PAF+TI LMP TYSIAYG+I GI
Sbjct: 428 SIPVWATGSTLVLVGSMMMKSTTLINWSYLGDSIPAFITIALMPFTYSIAYGLIAGI--- 484
Query: 479 IALSLYDCVVGLVRCFLKLRRMVAKEQNQVSA 510
I +L + ++ + + R+V + NQ A
Sbjct: 485 ICYALLNSIIYAIDK-MSRGRLVPADYNQKEA 515
>sp|O34978|PBUO_BACSU Guanine/hypoxanthine permease PbuO OS=Bacillus subtilis (strain
168) GN=pbuO PE=1 SV=1
Length = 432
Score = 221 bits (564), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 234/461 (50%), Gaps = 75/461 (16%)
Query: 18 FKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDCT 77
F L+ +++ +E+ AG TF TM YI+ VN I+A++G VP +Q
Sbjct: 2 FHLKEQQTSIKQEIIAGLTTFFTMVYIVVVNPVILANAG---------VPFDQ------- 45
Query: 78 LKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLVGF 137
+ AT++++++G+ M + AN P+ +APGMG NAYLA+++V
Sbjct: 46 -----------------VFTATIIASIVGTLWMALAANYPIAIAPGMGLNAYLAFHVVS- 87
Query: 138 HGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQ 197
G I+Y TA + V G F+ +S LR QL IP ++ GIGLFIAF+GL+
Sbjct: 88 ASDGGITYATAFSAVFTAGVLFIILSLTPLRKQLIEAIPNNLKYGITTGIGLFIAFIGLR 147
Query: 198 LHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYGLMKEIK 257
G+V D S L+T+ G + SP L L G LI+ ++ +
Sbjct: 148 ---QAGIVAADESNLVTL---------------GNLHSPGVILTLVGLLISVVLMVLNVS 189
Query: 258 GSMIYGILFVTLISWIRGT-----AVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISF 312
G++ G+ LI++ G PH P+G N F +F
Sbjct: 190 GALFIGMAATALIAFFTGQLHFSKGFMSLPHLPEGLMISNPFT---------------AF 234
Query: 313 TNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVG 372
+ H ++ + + L V + TTGT+ +AE G + + K A + D+++T VG
Sbjct: 235 GDVIHHGLYAVVFSFLLVTIFDTTGTMIGVAEQAGLM-KNNKLPNVRKALLADSTATTVG 293
Query: 373 SALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWA--VGPSLV 430
+ G SP ++ESSAG+ GGRTGLTA+ V + F S+FF+PL++++ A P+L+
Sbjct: 294 AVFGTSPTTAFIESSAGVAAGGRTGLTALTVAVMFAASMFFSPLVSALSGIAAITSPALI 353
Query: 431 MVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGI 471
+VG +MM V +++W + A PAF+ IL MPLT SI+ GI
Sbjct: 354 IVGSLMMGSVSNMNWKEMDEAFPAFLVILAMPLTSSISTGI 394
>sp|Q57772|Y326_METJA Putative permease MJ0326 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0326 PE=3 SV=1
Length = 436
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 241/473 (50%), Gaps = 67/473 (14%)
Query: 12 SFIGKHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQT 71
F+ K+F+ E + E AG TF+TMAYII VN I++ +G M+
Sbjct: 4 KFVEKYFEFEKYGTNLKVETLAGITTFMTMAYIIFVNPQILSTAG-----------MDFG 52
Query: 72 ASPDCTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLA 131
A ++VAT +++ I + MG+ A P LAPGMG NAY
Sbjct: 53 A----------------------VMVATCIASAIATLVMGLYARYPFALAPGMGLNAYFT 90
Query: 132 YNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFI 191
Y + G G I ++ A+ V + G F+ ++ +R + +IP ++ A GIGLFI
Sbjct: 91 YGVC--LGMG-IDWRVALGAVFISGVLFIILTLTKIRTWIFNVIPNAIKYGTAVGIGLFI 147
Query: 192 AFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYG 251
AF+GL+ G++ +TL+T+ G + P+ L L G +T
Sbjct: 148 AFIGLK---SAGIIVSSKATLVTL---------------GNLMEPSTLLALFGIFLTSIL 189
Query: 252 LMKEIKGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVIS 311
+ + + G+++ GI+ +LI I G SP + ++ I G +
Sbjct: 190 VSRNVIGAILIGIIVTSLIGMILGI-------SPFPEGIFSMPPSIAPTFLQLDIMGAL- 241
Query: 312 FTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIV 371
N + + LA +VD+ T GTL +A G++++ GK A M DA+ T+V
Sbjct: 242 ----NLGLLTIVLA-FFFVDMFDTLGTLSALASQAGYLDKDGKLPRVEKALMADATGTVV 296
Query: 372 GSALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVM 431
GS LG S + TY+ES++GI GGRTG +V+V + F +SLFF P++ ++PP+A +LV+
Sbjct: 297 GSLLGTSTVTTYIESASGIALGGRTGFVSVVVAMLFLLSLFFYPVVKAIPPYATAAALVI 356
Query: 432 VGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSLY 484
VG +MM+ VK ID+ A+PAF+T+L +PLT+SIA G+ G Y L ++
Sbjct: 357 VGALMMRSVKYIDFDDYTEAIPAFITLLTIPLTFSIATGLALGFITYPILKVF 409
>sp|O34987|PBUG_BACSU Guanine/hypoxanthine permease PbuG OS=Bacillus subtilis (strain
168) GN=pbuG PE=1 SV=1
Length = 440
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 229/464 (49%), Gaps = 61/464 (13%)
Query: 17 HFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDC 76
F+ + + + E+ G TFL+MAYI+ VN +A SV D
Sbjct: 4 FFQFDELGTSYRNEIIGGLTTFLSMAYILFVNPITLALE----SVKD------------- 46
Query: 77 TLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLVG 136
+ L + + AT L++ G MG++A P+ +APGMG NA+ A+++V
Sbjct: 47 -------FPEALRIDQGAVFTATALASAAGCILMGLIARYPIAIAPGMGLNAFFAFSVV- 98
Query: 137 FHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGL 196
G G IS+Q A++ V + G F+A+S G R ++ IP ++LA AGIGLFI FVGL
Sbjct: 99 -LGMG-ISWQAALSGVFISGLIFVALSLTGFREKIINAIPPELKLAVGAGIGLFITFVGL 156
Query: 197 QLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYGLMKEI 256
Q G G++ +PSTL+TI G + S L + G ++T ++ +
Sbjct: 157 Q---GSGIITANPSTLVTI---------------GNIHSGPVLLTIFGVIVTVILMVLRV 198
Query: 257 KGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGV--ISFTN 314
+ G+L + I G P Q I + T G I +
Sbjct: 199 NAGVFIGMLLTAVAGMIFGLV-----PVPT--------QIIGSVPSLAPTFGQAWIHLPD 245
Query: 315 FNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSA 374
++ + + T L+V T GTL +A G + E K A + D+SS ++G+
Sbjct: 246 IFSVQMLIVILTFLFVGFFDTAGTLVAVATQAGLMKEN-KLPRAGRALLADSSSIVIGAV 304
Query: 375 LGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMVGV 434
LG S +YVESS+G+ G R+G A++ G+ F ++ FF+PLL+ V P+L++VG
Sbjct: 305 LGTSTTTSYVESSSGVAAGARSGFAAIVTGILFLLATFFSPLLSVVTSNVTAPALIIVGA 364
Query: 435 MMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLY 478
+M+ + I W + AVPAF+T+++MPLTYSIA GI G Y
Sbjct: 365 LMVAPLGKIAWDKFEVAVPAFLTMIMMPLTYSIATGIAIGFIFY 408
>sp|P31440|YICO_ECOLI Putative permease YicO OS=Escherichia coli (strain K12) GN=yicO
PE=1 SV=3
Length = 444
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 221/458 (48%), Gaps = 68/458 (14%)
Query: 14 IGKHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTAS 73
+ + FKL + EL AG TFLTM YI+ VN I+ +
Sbjct: 16 LSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAA------------------ 57
Query: 74 PDCTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYN 133
+ P V + V T L A IGS AMGI ANLP+ LAP MG NA+ A+
Sbjct: 58 ---QMDPKVVF------------VTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFV 102
Query: 134 LVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAF 193
+VG G IS+QT M + ++ F +R + IP +R+ +GIGLFIA
Sbjct: 103 VVGAMG---ISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIAL 159
Query: 194 VGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYGLM 253
+GL+ G++ + TL+ I G + S LG+ GF I
Sbjct: 160 MGLK---NTGVIVANKDTLVMI---------------GDLSSHGVLLGILGFFIITVLSS 201
Query: 254 KEIKGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFT 313
+ +++ I+ + +F GD +++ I I G + +
Sbjct: 202 RHFHAAVLVSIV-------VTSCCGLFF-----GDVHFSGVYSIPP--DISGVIGEVDLS 247
Query: 314 NFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGS 373
E+ + + + +++ ++GTL + + G ++ GKF A VD+ S++ G+
Sbjct: 248 GALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGA 307
Query: 374 ALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMVG 433
+G S + Y+ES++G+ GGRTGLTAV+VG+ F + +FF+PL+ VPP+A +L+ VG
Sbjct: 308 FIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVG 367
Query: 434 VMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGI 471
V+M + ++W +VPAF+T ++MP T+SI GI
Sbjct: 368 VLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGI 405
>sp|P31466|PURP_ECOLI Probable adenine permease PurP OS=Escherichia coli (strain K12)
GN=purP PE=1 SV=2
Length = 445
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 225/458 (49%), Gaps = 72/458 (15%)
Query: 16 KHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPD 75
+ FKL + E+ AG TFLTM YI+ VN I+ +G M+ +A
Sbjct: 17 RVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAG-----------MDTSA--- 62
Query: 76 CTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLV 135
+ V T L A GS MG+ ANLP+ LAP MG NA+ A+ +V
Sbjct: 63 -------------------VFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVV 103
Query: 136 GFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVG 195
G + +Q M + L ++ F +R + IP +R+ +GIGLFI +G
Sbjct: 104 QAMG---LPWQVGMGAIFWGAIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG 160
Query: 196 LQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYGLMKE 255
L+ G++ +P TL++I G + S + LG+ GF I +
Sbjct: 161 LK---NAGVIVANPETLVSI---------------GNLTSHSVLLGILGFFIIAILASRN 202
Query: 256 IKGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFH-KIQSTAGVISFT- 313
I +++ I+ TL+ W+ G D +YN IV + + G +
Sbjct: 203 IHAAVLVSIVVTTLLGWMLG------------DVHYN---GIVSAPPSVMTVVGHVDLAG 247
Query: 314 NFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGS 373
+FN V + +L V++ ++GTL + + G +E+GKF A VD+ S++ GS
Sbjct: 248 SFNLGLAGVIFSFML-VNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGS 306
Query: 374 ALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMVG 433
+G S + Y+ESS+G+ GGRTGLTAV+VGL F + +F +PL VP +A +L+ VG
Sbjct: 307 FIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAGALIYVG 366
Query: 434 VMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGI 471
V+M + ++W + +VPAF+T ++MP ++SI GI
Sbjct: 367 VLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGI 404
>sp|P0AF52|YJCD_ECOLI Putative permease YjcD OS=Escherichia coli (strain K12) GN=yjcD
PE=1 SV=1
Length = 449
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 206/462 (44%), Gaps = 71/462 (15%)
Query: 18 FKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDCT 77
FK+ R S +E+ AG TFL M Y + V ++ +G
Sbjct: 16 FKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAG--------------------- 54
Query: 78 LKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLV-G 136
P + + VAT L A +GS MG+ ANLPL + + A+ A++LV G
Sbjct: 55 FPP------------AAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG 102
Query: 137 FHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGL 196
H IS A+ V + G F ISA G+R+ + R +P V GIGLF+ +
Sbjct: 103 QH----ISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIA- 157
Query: 197 QLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYGLMK-E 255
GVGLV +P D PV +G P + L G L GL K +
Sbjct: 158 --ANGVGLVIKNP---------LDGLPV---ALGDFATFPVI-MSLVG-LAVIIGLEKLK 201
Query: 256 IKGSMIYGILFVTLISWIRGTAVTY---FPHSPQGDANYNYFQKIVDFHKIQSTAGVISF 312
+ G ++ I+ ++++ I V + F D N N S G +
Sbjct: 202 VPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENGN------------SLIGSLDI 249
Query: 313 TNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVG 372
+ V ++ L+ V TGT+ +A +++ G+ A D+ S++
Sbjct: 250 MGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALTTDSMSSVFS 309
Query: 373 SALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMV 432
+G +P A Y+ES+AG GG+TGLTA+ VG+ F + LF +PL VP +A P+L+ V
Sbjct: 310 GLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGYATAPALMYV 369
Query: 433 GVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGG 474
G++M+ V ID+ A+ VT + + LT +I GI+ G
Sbjct: 370 GLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIG 411
>sp|P0AF53|YJCD_ECO57 Putative permease YjcD OS=Escherichia coli O157:H7 GN=yjcD PE=3
SV=1
Length = 449
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 206/462 (44%), Gaps = 71/462 (15%)
Query: 18 FKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDCT 77
FK+ R S +E+ AG TFL M Y + V ++ +G
Sbjct: 16 FKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAG--------------------- 54
Query: 78 LKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLV-G 136
P + + VAT L A +GS MG+ ANLPL + + A+ A++LV G
Sbjct: 55 FPP------------AAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG 102
Query: 137 FHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGL 196
H IS A+ V + G F ISA G+R+ + R +P V GIGLF+ +
Sbjct: 103 QH----ISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIA- 157
Query: 197 QLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYGLMK-E 255
GVGLV +P D PV +G P + L G L GL K +
Sbjct: 158 --ANGVGLVIKNP---------LDGLPV---ALGDFATFPVI-MSLVG-LAVIIGLEKLK 201
Query: 256 IKGSMIYGILFVTLISWIRGTAVTY---FPHSPQGDANYNYFQKIVDFHKIQSTAGVISF 312
+ G ++ I+ ++++ I V + F D N N S G +
Sbjct: 202 VPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENGN------------SLIGSLDI 249
Query: 313 TNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVG 372
+ V ++ L+ V TGT+ +A +++ G+ A D+ S++
Sbjct: 250 MGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALTTDSMSSVFS 309
Query: 373 SALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMV 432
+G +P A Y+ES+AG GG+TGLTA+ VG+ F + LF +PL VP +A P+L+ V
Sbjct: 310 GLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGYATAPALMYV 369
Query: 433 GVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGG 474
G++M+ V ID+ A+ VT + + LT +I GI+ G
Sbjct: 370 GLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIG 411
>sp|P44530|Y125_HAEIN Putative permease HI_0125 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0125 PE=3 SV=1
Length = 438
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 198/463 (42%), Gaps = 72/463 (15%)
Query: 16 KHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPD 75
K F+L+ R S +E+ AG TFL M Y + V ++ +G
Sbjct: 6 KTFELKQRGSTVRQEIIAGLTTFLAMVYSVIVVPNMLGAAG------------------- 46
Query: 76 CTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLV 135
+ +AT L A +GS +G+ AN P+ + + A+ A++LV
Sbjct: 47 --------------FPAESVFIATCLVAGLGSILIGLWANAPMAIGCAISLTAFTAFSLV 92
Query: 136 GFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVG 195
++ A+ V + G F IS G+RA + R +P + GIGLF+ +
Sbjct: 93 IGQ---KVAIPVALGAVFLMGVVFTLISTTGIRAWILRNLPSNIAHGAGIGIGLFLLLIA 149
Query: 196 LQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYGLMK- 254
GVGLV + + L + PV + IG L GL K
Sbjct: 150 ---ANGVGLVVSNQAGLPVKLGDFTSFPVMMSLIG---------------LALIIGLEKM 191
Query: 255 EIKGSMIYGILFVTLISWIRGTAVTY---FPHSPQGDANYNYFQKIVDFHKIQSTAGVIS 311
+IKG +++ I+ +T++ I V + P N + Q +
Sbjct: 192 KIKGGILWVIIAITIVGLIFDPNVKFGGEIFKMPTFGENSLFLQ--------------LD 237
Query: 312 FTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIV 371
F + + L+ V TGT+ +A +++ G+ A D+ S++
Sbjct: 238 FMGALQPAILPVVFALVMTAVFDATGTIRAVAGQADLLDKDGQIINGGKALTSDSISSLF 297
Query: 372 GSALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVM 431
G +P A Y+ES+AG GG+TG+TA++VG+ F + LFF PL VP +A P+L+
Sbjct: 298 SGLFGTAPAAVYIESAAGTAAGGKTGITAIVVGVLFLLMLFFQPLAFLVPGYATAPALMY 357
Query: 432 VGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGG 474
VG++M+ V +D+ A+ + + + LT +I GI+ G
Sbjct: 358 VGLLMLSNVSKLDFDDFVGAMSGLICAVFIVLTANIVTGIMLG 400
>sp|Q46817|YGFQ_ECOLI Putative permease YgfQ OS=Escherichia coli (strain K12) GN=ygfQ
PE=3 SV=2
Length = 455
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 200/465 (43%), Gaps = 73/465 (15%)
Query: 16 KHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPD 75
+FK+ R S +E+ AG TFL M Y + V ++ +G
Sbjct: 20 NYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAG------------------- 60
Query: 76 CTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLV 135
P + + VAT L A GS MG+ ANLP+ + + A+ A++LV
Sbjct: 61 --FPP------------AAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLV 106
Query: 136 GFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVG 195
IS A+ V + G F AIS G+R + R +P + GIGLF+ +
Sbjct: 107 LGQ---QISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIA 163
Query: 196 LQLHQGVGLVGPDPSTLLTITACADND-PVTGACIGGKMRSPTFWLGLAGFLITCYGLMK 254
GVG+V +P L + A PV + +G L +GL K
Sbjct: 164 ---ANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLG---------------LAVIFGLEK 205
Query: 255 -EIKGSMIYGILFVTLISWIRGTAVTYFP----HSPQGDANYNYFQKIVDFHKIQSTAGV 309
+ G ++ I+ +++I I AV Y S G+ + + +Q T
Sbjct: 206 CRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPSLTGEDGKSLIFSLDIMGALQPT--- 262
Query: 310 ISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASST 369
V ++ L+ V TGT+ +A +++ + A D+ S+
Sbjct: 263 ----------VLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSS 312
Query: 370 IVGSALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSL 429
I +G +P A Y+ES+AG GG+TGLTA +VG F + LF +PL +P +A P+L
Sbjct: 313 IFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGALFLLILFLSPLSFLIPGYATAPAL 372
Query: 430 VMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGG 474
+ VG++M+ V +D+ A+ V + + LT +I GI+ G
Sbjct: 373 MYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLG 417
>sp|Q09764|YA7B_SCHPO Uncharacterized protein C24H6.11c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24H6.11c PE=4 SV=1
Length = 958
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 356 EGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFFISLFFTP 415
+ E IA+ V S+T+ G+ + TY S IR GG L +++ L L P
Sbjct: 456 DKELIAHGV--SNTLSGAVGSIQNYMTYTNSLMFIRSGGNNRLAGIMLALATVALLVIGP 513
Query: 416 -LLTSVPPWAVGPSLVMVGVMMMK 438
++ +P W VG + ++G+ ++K
Sbjct: 514 GIIAYIPVWTVGCLIYLLGIELLK 537
>sp|A1KS32|DXS_NEIMF 1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
GN=dxs PE=3 SV=1
Length = 637
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 339 LYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVS 378
++TM + GG + E EY A+ V SST +G+ALG++
Sbjct: 91 MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMA 130
>sp|P42086|PBUX_BACSU Xanthine permease OS=Bacillus subtilis (strain 168) GN=pbuX PE=3
SV=1
Length = 438
Score = 32.7 bits (73), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 405 LYFFISLFFTPLLTSVPPWAVGPSLVMVGVMMMKVVKD--------IDWGSIKHAVPAFV 456
L IS FF L++ PP G + ++G+ +M V + D+G + + AF
Sbjct: 106 LVILISFFFGKLVSFFPPVVTGSVVTIIGITLMPVAMNNMAGGEGSADFGDLSNLALAFT 165
Query: 457 TILLMPLTYSIAYGIIGGIGLYIAL 481
+ ++ L Y G I + + I +
Sbjct: 166 VLSIIVLLYRFTKGFIKSVSILIGI 190
>sp|Q9JXV7|DXS_NEIMB 1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis
serogroup B (strain MC58) GN=dxs PE=3 SV=1
Length = 637
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 339 LYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVS 378
++TM + GG + E EY A+ V SST +G+ALG++
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMA 130
>sp|Q9JW13|DXS_NEIMA 1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=dxs PE=3
SV=1
Length = 637
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 339 LYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVS 378
++TM + GG + E EY A+ V SST +G+ALG++
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMA 130
>sp|Q5FAI2|DXS_NEIG1 1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria gonorrhoeae
(strain ATCC 700825 / FA 1090) GN=dxs PE=3 SV=1
Length = 637
Score = 32.3 bits (72), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 339 LYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVS 378
++TM + GG + E EY A+ V SST +G+ALG++
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMA 130
>sp|B4RNW6|DXS_NEIG2 1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria gonorrhoeae
(strain NCCP11945) GN=dxs PE=3 SV=1
Length = 637
Score = 32.3 bits (72), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 339 LYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVS 378
++TM + GG + E EY A+ V SST +G+ALG++
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMA 130
>sp|A9M1G3|DXS_NEIM0 1-deoxy-D-xylulose-5-phosphate synthase OS=Neisseria meningitidis
serogroup C (strain 053442) GN=dxs PE=3 SV=1
Length = 635
Score = 32.3 bits (72), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 339 LYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVS 378
++TM + GG + E EY A+ V SST +G+ALG++
Sbjct: 91 MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMA 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,217,875
Number of Sequences: 539616
Number of extensions: 7871641
Number of successful extensions: 24397
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 24312
Number of HSP's gapped (non-prelim): 58
length of query: 521
length of database: 191,569,459
effective HSP length: 122
effective length of query: 399
effective length of database: 125,736,307
effective search space: 50168786493
effective search space used: 50168786493
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)