Query 039363
Match_columns 521
No_of_seqs 201 out of 1883
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:58:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039363.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039363hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2252 Xanthine/uracil/vitami 100.0 1.7E-75 3.7E-80 608.0 38.5 407 10-483 2-409 (436)
2 COG0659 SUL1 Sulfate permease 100.0 3.8E-45 8.3E-50 398.9 39.2 401 25-502 19-430 (554)
3 PF00860 Xan_ur_permease: Perm 100.0 7.9E-43 1.7E-47 368.7 24.0 375 28-470 1-386 (389)
4 TIGR00801 ncs2 uracil-xanthine 100.0 1E-40 2.2E-45 355.1 36.2 385 25-483 2-414 (415)
5 PRK11660 putative transporter; 100.0 1.9E-40 4.1E-45 366.0 38.5 389 25-490 27-449 (568)
6 TIGR00815 sulP high affinity s 100.0 1.4E-39 3E-44 358.9 35.3 400 25-500 12-438 (563)
7 TIGR03173 pbuX xanthine permea 100.0 1.1E-38 2.4E-43 338.9 34.6 368 34-484 1-404 (406)
8 COG2233 UraA Xanthine/uracil p 100.0 2.8E-38 6E-43 331.8 31.0 395 18-490 6-438 (451)
9 PRK10720 uracil transporter; P 100.0 2.3E-37 5E-42 330.0 36.9 333 15-443 2-352 (428)
10 TIGR03616 RutG pyrimidine util 100.0 1.5E-36 3.3E-41 323.6 37.4 373 16-486 19-426 (429)
11 PRK11412 putative uracil/xanth 100.0 1.1E-32 2.3E-37 292.9 37.2 382 28-486 8-428 (433)
12 KOG0236 Sulfate/bicarbonate/ox 100.0 3.1E-33 6.7E-38 311.5 27.2 396 24-500 77-507 (665)
13 PF00916 Sulfate_transp: Sulfa 99.9 6.3E-28 1.4E-32 243.7 12.2 244 162-437 1-262 (280)
14 TIGR00843 benE benzoate transp 99.8 8.1E-18 1.8E-22 175.8 32.4 368 4-480 3-394 (395)
15 KOG1292 Xanthine/uracil transp 99.8 1.2E-17 2.7E-22 174.3 27.5 355 17-454 2-412 (510)
16 PF03594 BenE: Benzoate membra 99.5 4E-11 8.8E-16 123.9 32.0 319 91-479 39-377 (378)
17 COG3135 BenE Uncharacterized p 99.2 1.2E-08 2.6E-13 103.8 25.8 323 91-486 54-399 (402)
18 TIGR00834 ae anion exchange pr 98.4 7.9E-05 1.7E-09 85.7 25.6 327 96-439 403-792 (900)
19 KOG1172 Na+-independent Cl/HCO 98.3 0.00022 4.7E-09 80.6 24.8 328 94-439 392-768 (876)
20 PF00955 HCO3_cotransp: HCO3- 96.9 0.0004 8.6E-09 75.9 2.2 327 95-440 66-474 (510)
21 PF13792 Sulfate_tra_GLY: Sulf 94.9 0.059 1.3E-06 44.9 5.4 29 24-58 13-44 (84)
22 PF11840 DUF3360: Protein of u 93.4 3.8 8.3E-05 43.1 16.0 249 149-436 145-403 (492)
23 COG2233 UraA Xanthine/uracil p 58.8 11 0.00025 40.9 4.2 82 403-484 115-219 (451)
24 TIGR03173 pbuX xanthine permea 47.0 2E+02 0.0043 30.7 11.5 84 400-483 89-191 (406)
25 TIGR00801 ncs2 uracil-xanthine 46.5 1.7E+02 0.0037 31.4 10.9 83 401-483 98-207 (415)
26 COG0659 SUL1 Sulfate permease 44.4 2E+02 0.0044 32.3 11.3 106 325-442 29-149 (554)
27 TIGR00815 sulP high affinity s 42.3 5.4E+02 0.012 28.8 14.6 36 151-188 335-370 (563)
28 PRK10720 uracil transporter; P 40.6 89 0.0019 33.9 7.6 47 153-199 306-352 (428)
29 PF00860 Xan_ur_permease: Perm 37.0 2.4E+02 0.0053 29.9 10.2 74 415-488 114-208 (389)
30 COG4392 Predicted membrane pro 31.7 2E+02 0.0044 25.1 6.8 67 416-484 40-106 (107)
31 PRK11660 putative transporter; 30.1 1.6E+02 0.0034 33.2 7.6 118 363-481 322-444 (568)
32 PF07178 TraL: TraL protein; 28.9 1.6E+02 0.0035 24.8 5.7 47 447-493 19-65 (95)
33 TIGR03082 Gneg_AbrB_dup membra 27.8 2.1E+02 0.0045 26.3 6.8 90 419-517 43-132 (156)
34 PRK11412 putative uracil/xanth 27.3 1.5E+02 0.0032 32.4 6.5 49 151-199 319-367 (433)
35 COG3275 LytS Putative regulato 24.9 9.9E+02 0.022 26.6 11.9 128 367-497 72-206 (557)
36 TIGR00843 benE benzoate transp 24.7 2.3E+02 0.0049 30.5 7.2 84 97-189 257-341 (395)
37 PF07613 DUF1576: Protein of u 24.0 4.8E+02 0.01 25.0 8.5 81 395-485 58-154 (183)
38 TIGR03616 RutG pyrimidine util 22.7 2E+02 0.0044 31.1 6.6 48 151-198 324-371 (429)
39 PF15110 TMEM141: TMEM141 prot 21.7 1.3E+02 0.0028 25.6 3.6 23 251-273 48-74 (94)
40 TIGR00210 gltS sodium--glutama 21.4 2.4E+02 0.0051 30.4 6.7 40 154-193 11-52 (398)
41 PF06305 DUF1049: Protein of u 20.7 2.9E+02 0.0063 21.2 5.5 37 467-508 28-64 (68)
42 PF01616 Orbi_NS3: Orbivirus N 20.5 4.8E+02 0.01 25.3 7.8 47 466-512 131-177 (195)
43 KOG1292 Xanthine/uracil transp 20.2 6.5E+02 0.014 27.9 9.5 45 154-198 353-397 (510)
No 1
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.7e-75 Score=607.99 Aligned_cols=407 Identities=40% Similarity=0.685 Sum_probs=376.7
Q ss_pred HhhhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhhhHhhhcCCCccccCCCCCCCCCCCCCCCCCCCcccchhhh
Q 039363 10 SKSFIGKHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDCTLKPNVGYENCLA 89 (521)
Q Consensus 10 ~~~~~~~~f~~~~~~~~~~~ei~aGl~~~lam~y~~~v~P~ila~aG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (521)
.++++|||||++||++++|+|++||+|||++|+|++.|||+|++++|+|
T Consensus 2 ~~~~~~~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~ag~~------------------------------- 50 (436)
T COG2252 2 KKGDLDRFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGAAGMP------------------------------- 50 (436)
T ss_pred chhHHHHHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHhcCCC-------------------------------
Confidence 3678999999999999999999999999999999999999999999985
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCCccCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHhhhHH
Q 039363 90 KTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRA 169 (521)
Q Consensus 90 ~~~~~~i~at~l~a~igtll~g~~a~~P~~~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~~l~g 169 (521)
..+++.+|++++.++|++||+++|+|++++|+||+|++++|.++..+| ++||.+++++|++|+++++++++|+|+
T Consensus 51 --~~av~~AT~l~a~~gs~~mgl~An~P~alapgmglnAfFaftvv~~~g---i~wq~AL~aVF~sGiif~ils~t~iR~ 125 (436)
T COG2252 51 --VGAVFVATCLAAAIGSIAMGLYANLPIALAPGMGLNAFFAFTVVLGMG---LSWQVALGAVFLSGIIFLLLSLTGIRE 125 (436)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHcCchhhcchhhHHHHHHHHHHHhcC---CcHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 668999999999999999999999999999999999999999998765 899999999999999999999999999
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHH
Q 039363 170 QLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITC 249 (521)
Q Consensus 170 ~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~ 249 (521)
|++|.+|++++.++.+|||++|+++|+++. |+++.+++++..+| ++++|.+.++++|++++.
T Consensus 126 ~ii~~IP~~lk~ai~aGIGlFia~IgL~~~---Givv~~~~tlv~LG---------------~~~~p~vll~i~G~~l~~ 187 (436)
T COG2252 126 WIINAIPRSLKLAIGAGIGLFIALIGLKNA---GIVVANPATLVALG---------------DFTSPGVLLAILGLLLII 187 (436)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHhhC---CeEEecCcceEEee---------------cCCCchHHHHHHHHHHHH
Confidence 999999999999999999999999999986 78777777766655 888899999999999999
Q ss_pred HHHhhcccchhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccc-hhhhHHHHHHHHHH
Q 039363 250 YGLMKEIKGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTN-FNHSEVWVALATLL 328 (521)
Q Consensus 250 ~l~~~~ip~aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~-~~~~~~~~~~~~~~ 328 (521)
.+..||+|++++++++..++++|++|....+.+. . ..+|+..+.+++.|+.. .....+++.++++.
T Consensus 188 ~L~~~~i~Gaili~i~~~t~~g~~~g~~~~~~~~--~-----------~~~p~~~~~~~~~d~~~~~~~~~~~~~if~f~ 254 (436)
T COG2252 188 VLVSRKIKGAILIGILVTTILGIILGIDVHFGGL--V-----------GAPPSLSPIFGQLDLSGNLSLAAFAPVIFTFF 254 (436)
T ss_pred HHHHhhccHhhhHHHHHHHHHHHHhccccccccc--c-----------cCCCCccchhhHhhhccchhhHHHHHHHHHHH
Confidence 9999999999999999999999999952111110 1 13455554555777776 55567888999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhhhhhhhhcCcccchHHHHHHHHHH
Q 039363 329 YVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIREGGRTGLTAVIVGLYFF 408 (521)
Q Consensus 329 lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~~GarTgla~v~~g~~~l 408 (521)
+++++|++||+.++++++|+.|+|++.+|.+|.+.+|++++++|+++|++|+|+|.||++++++|+|||++++++|.+|+
T Consensus 255 ~~~~FD~~GTl~gv~~~ag~~~~~g~~~~~~~al~~D~v~t~~ga~~GtS~~t~yIESaaGva~GgrTGltavv~g~lFl 334 (436)
T COG2252 255 FVDLFDTLGTLIGVASKAGLLDKNGKMPRIGKALLADSVATVVGALFGTSTVTAYIESAAGVAAGGRTGLTAVVTGLLFL 334 (436)
T ss_pred HHHHhcchHHHHHHHHhcCCcCCCCCccccchHHHHhHHHHHHHHhcCCcchhhhhhcccccccccccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHhhcChhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039363 409 ISLFFTPLLTSVPPWAVGPSLVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSL 483 (521)
Q Consensus 409 l~lfl~pli~~IP~~al~~aLI~vG~~m~~~i~~i~~~~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~~i~l~l 483 (521)
+++|++|+...+|..+++|+|+++|.+|+++++++||+|..|.+|+|++++++|+||+|++|+++|++.|.++|+
T Consensus 335 ~~lf~~Pl~~~vP~~AtapaLi~vG~lM~~~v~~id~~d~~ea~PaF~tiv~mplTySIa~Gia~Gfi~y~i~k~ 409 (436)
T COG2252 335 LSLFFSPLAALVPGYATAPALIIVGALMLSSVKQIDWSDFTEAVPAFLTIVMMPLTYSIADGIAFGFISYVILKV 409 (436)
T ss_pred HHHHHHHHHHhCcHhhhhHHHHHHHHHHHhhhccCCchhhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998
No 2
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-45 Score=398.85 Aligned_cols=401 Identities=18% Similarity=0.256 Sum_probs=309.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHhhhc---CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHHH
Q 039363 25 SCFTKELRAGTATFLTMAYIITVNATIIADS---GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVL 101 (521)
Q Consensus 25 ~~~~~ei~aGl~~~lam~y~~~v~P~ila~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~l 101 (521)
+.+++|++||+++.... .|+.++++ |+| | ++| +.
T Consensus 19 ~~l~~Dl~AGltva~va------lP~ama~a~~aGv~--------------------p-~~G----------------Ly 55 (554)
T COG0659 19 SWLRGDLLAGLTVAAVA------LPLAMAFAIAAGVP--------------------P-EAG----------------LY 55 (554)
T ss_pred hhhHHHHHHHHHHHHHH------hHHHHHHHHHcCCC--------------------H-HHH----------------HH
Confidence 45999999999998654 59999985 664 3 333 36
Q ss_pred HHHHHHHHHHHHhcCCCcc-CCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCChhHH
Q 039363 102 SAMIGSFAMGILANLPLGL-APGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVR 180 (521)
Q Consensus 102 ~a~igtll~g~~a~~P~~~-~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~~l~g~l~~~iP~~V~ 180 (521)
++.++.+++++++..|... +|.-++..+. +.++.+.. ..+++.++.+++++|++|+++|++|+ |++.+|+|++|+
T Consensus 56 as~i~~~v~alfGgs~~~i~GPt~a~~~v~-a~~i~~~~--~~g~~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl 131 (554)
T COG0659 56 ASIVAGIIYALFGGSRGLISGPTGAFAVVL-AAVIASLV--ETGLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVL 131 (554)
T ss_pred HHHHHHHHHHHHcCCccceeccchhhHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHH
Confidence 7788888888887777654 6754444443 44444111 24699999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHHHH--Hhhcccc
Q 039363 181 LACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYG--LMKEIKG 258 (521)
Q Consensus 181 ~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~~l--~~~~ip~ 258 (521)
.||++|+|++|+..|++.. +|........+..+...++ ...+.+++++.++++++.+++.+ +.+|+|+
T Consensus 132 ~Gf~~Giai~I~~~Ql~~~--~G~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~lg~~~l~il~~~~~~~~~~P~ 201 (554)
T COG0659 132 IGFTAGIAILIILTQLPVL--LGLASKVSGFWAKVSALFT--------VLLTINLATLLLGLLTLAILLFLPRLTPRIPS 201 (554)
T ss_pred HHHHHHHHHHHHHHHHHHH--cCCCccccchHHHHHHHHH--------hcccccHHHHHHHHHHHHHHHHccchhhhCCc
Confidence 9999999999999999988 5664432222222221111 12356777888888888877665 4567999
Q ss_pred hhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 039363 259 SMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVALATLLYVDVLATTGT 338 (521)
Q Consensus 259 aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~~~~lv~~~etigt 338 (521)
+ +++++++|.++|.++.+....++++-..|+. ..++++|+ ++++.+ ..+++..+.+.++.++|+..+
T Consensus 202 ~-liaiv~~t~i~~~~~~~~~~~G~i~~~lp~~---~~~~~~P~-------~~~~~~--~~l~~~al~la~lg~iesllt 268 (554)
T COG0659 202 P-LIALVLGTLIVWIFPLDSLRYGEIPGSLPSG---LPHFRLPN-------VSLSLL--LALLPYALALALLGLLESLLT 268 (554)
T ss_pred H-HHHHHHHHHHHHHhcCCchhcccCcccCCcC---CCcccCCC-------CCHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 8 9999999999999987532233332222211 01223333 445555 357788899999999999999
Q ss_pred HHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccc-hhhhhhhhhhcCcccchHHHHHHHHHHHH-HhHHHH
Q 039363 339 LYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIA-TYVESSAGIREGGRTGLTAVIVGLYFFIS-LFFTPL 416 (521)
Q Consensus 339 ~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~t-s~~~Sa~~v~~GarTgla~v~~g~~~ll~-lfl~pl 416 (521)
.++++++. +++.|.|||++|||++|+++++|||+|.| +|+||+.|+++|||||++++++++++++. +++.|+
T Consensus 269 a~~~~~~~------~~~~d~nrELiaqGiaNi~sglfgg~p~~g~~srS~~nv~sGarT~lsgi~~a~~lll~l~~~~~~ 342 (554)
T COG0659 269 AVSFDGMT------GTKHDSNRELIAQGIANIASGLFGGIPATGSISRSAINIKSGARTRLSGIIHAALLLLLLLFLAPL 342 (554)
T ss_pred HHHHHHhc------CCCCCCCHHHHHhhHHHHHHHHhCCccccchhHHHHHHHHhCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 99887643 35789999999999999999999999998 99999999999999999999999999997 889999
Q ss_pred HhhcChhhHHHHHHHHHHHHHH--Hhhh-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 039363 417 LTSVPPWAVGPSLVMVGVMMMK--VVKD-IDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSLYDCVVGLVRC 493 (521)
Q Consensus 417 i~~IP~~al~~aLI~vG~~m~~--~i~~-i~~~~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~~i~l~l~~~~~~~~~~ 493 (521)
+++||+++++++++++|+.++. .+++ .+|..+.|.+..++|++. .+++++..||.+|+++++++.++|.+||....
T Consensus 343 ~~~IP~a~Laavli~v~~~l~~~~~~~~~~~~~~~~e~~v~~~t~~~-tv~~~l~~GV~vGi~ls~~~~i~r~s~~~~~~ 421 (554)
T COG0659 343 VSYIPLAALAAVLILVGWGLLDWSLLKPLLRKLPRGELLVLLTTALL-TVFFDLVIGVVVGILLACLLFIRRISRPSIVV 421 (554)
T ss_pred HHhCcHHHHHHHHHHHHHHhccHHHHHHHHhcCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 9999999999999999999983 3444 233456666666555544 46779999999999999999999999999999
Q ss_pred HhhhhhhHh
Q 039363 494 FLKLRRMVA 502 (521)
Q Consensus 494 ~~~~~~~~~ 502 (521)
+++.++...
T Consensus 422 ~~~~~~~~~ 430 (554)
T COG0659 422 LGRVPGPAG 430 (554)
T ss_pred hccCCCccc
Confidence 999887643
No 3
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=7.9e-43 Score=368.68 Aligned_cols=375 Identities=30% Similarity=0.417 Sum_probs=254.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHhhhc-CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHHHHHHHH
Q 039363 28 TKELRAGTATFLTMAYIITVNATIIADS-GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVLSAMIG 106 (521)
Q Consensus 28 ~~ei~aGl~~~lam~y~~~v~P~ila~a-G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~l~a~ig 106 (521)
|||+++|+|||++|+|++++||.+++++ |++ . +...++++++++++++
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~~--------------------~-----------~~~~li~at~l~sgi~ 49 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGLD--------------------A-----------DTAALISATFLVSGIA 49 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS------------------------------------------HHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhccccc--------------------c-----------hhhHHHHHHHHHHHHH
Confidence 6999999999999999999999999998 653 1 1558999999999999
Q ss_pred HHHHHHHhcCCCccCCccchhHHHHHHHHhhh-CCCCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCChhHHHHHHH
Q 039363 107 SFAMGILANLPLGLAPGMGANAYLAYNLVGFH-GSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAA 185 (521)
Q Consensus 107 tll~g~~a~~P~~~~p~~G~~a~~~~~vv~~~-g~~~~~~~~al~a~~l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~ 185 (521)
|++|+++.|.|+.+.+|++.+.+.++..+.++ .+.+.+||.++++++++|++++++++++.|+|++|++||.|+.++..
T Consensus 50 Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~ 129 (389)
T PF00860_consen 50 TLLQGLPAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVL 129 (389)
T ss_dssp HHHHHHHTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHH
T ss_pred HHHHHhcCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEe
Confidence 99999988777777777777877766655431 11236899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHHHH----HhhcccchhH
Q 039363 186 GIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYG----LMKEIKGSMI 261 (521)
Q Consensus 186 gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~~l----~~~~ip~aiL 261 (521)
++|+.+..+++++.. +.. .+++. .. ..+......+...+.....+ ..++.+.+++
T Consensus 130 ~IGl~L~~~~~~~~~--~~~-~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ail 188 (389)
T PF00860_consen 130 LIGLSLAPIGLKNAG--GIW-GNPDG-LL-----------------VGDGKNLGLAVLTLLFILLLSLFLKGFLRKGAIL 188 (389)
T ss_dssp HHHHHHHHHHHHHTT--SS----BTT--B--------------------HHHHHHHHHHHHHHHHHHHSSSTTTTTHHHH
T ss_pred eehhhhhhhHhhccc--ccc-ccccc-cc-----------------cccccccccccccchhhhhhhhhhhhhcccccch
Confidence 999999999999872 211 11110 00 11122233333333332222 2234578999
Q ss_pred HHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039363 262 YGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVALATLLYVDVLATTGTLYT 341 (521)
Q Consensus 262 igIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~~~~lv~~~etigt~~a 341 (521)
+++++++++++.+|. .|+++. ... .+|+.+|.+.+ ++ +.. .++..++.++.+++++++|++|+..+
T Consensus 189 igi~~g~i~~~~~g~--~~~~~~-~~~------~~~~~~p~~~~-~g---~p~-f~~~~i~~~~~~~lv~~~es~G~~~a 254 (389)
T PF00860_consen 189 IGIIAGWIVAAILGV--VDFSPS-VSS------APWFSLPSPFP-FG---WPS-FDPGAILTFLIFALVAMFESIGTIVA 254 (389)
T ss_dssp HHHHHHHHHHHHHHH--TTSSH--HHH------S-SS-------------------HHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhcccc--cccCcc-ccc------ccccccccccc-cc---ccc-ccHHHHHHHHHHHHHHhhhhhhhHHH
Confidence 999999999999983 454431 111 25778887543 22 111 12345567788889999999999999
Q ss_pred HHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhhhhhhhhcC----cccchHHHHHHHHHHHHHhHHHHH
Q 039363 342 MAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIREG----GRTGLTAVIVGLYFFISLFFTPLL 417 (521)
Q Consensus 342 la~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~~G----arTgla~v~~g~~~ll~lfl~pli 417 (521)
+++..+..++ ++++.+|.+.+||++|+++++||++|+|+|+||++.++.+ .||++.+.+..+++.++..+.|++
T Consensus 255 ~~~~~~~~~~--~~~~~~r~l~~dg~~~~l~gl~G~~~~t~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~ 332 (389)
T PF00860_consen 255 VARIAGKDDP--RPPRIRRGLLADGLGTILAGLFGTSPTTTYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLF 332 (389)
T ss_dssp HHHHHTS-TC--CCCCHHHHHHHHHHHHHHHHHHT---EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHH
T ss_pred HHHHhCCCCc--cchhhcccceeeeeeeeechhhcCCCCccccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHH
Confidence 9987754332 2789999999999999999999999999999999999976 455555555555555557789999
Q ss_pred hhcChhhHHHH-HHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHH
Q 039363 418 TSVPPWAVGPS-LVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYG 470 (521)
Q Consensus 418 ~~IP~~al~~a-LI~vG~~m~~~i~~i~~~~~~~~~~a~vtii~~~lt~~i~~G 470 (521)
..||.++++++ ++++|.+|++++++++|+|.++.-+.+++.+.+++++++..+
T Consensus 333 ~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~~~r~~~iv~~~l~~g~~i~~~ 386 (389)
T PF00860_consen 333 ASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLDSARNAFIVGLSLPLGLSIAFG 386 (389)
T ss_dssp TTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHhccchHHHHHHHHHHHhHhheecccCccccHHHHHHhHHHHHHHhcc
Confidence 99999996666 789999999999999999988888888887777777776654
No 4
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=1e-40 Score=355.07 Aligned_cols=385 Identities=17% Similarity=0.210 Sum_probs=295.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHhhhcCCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHHHHHH
Q 039363 25 SCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVLSAM 104 (521)
Q Consensus 25 ~~~~~ei~aGl~~~lam~y~~~v~P~ila~aG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~l~a~ 104 (521)
.+.+|.++.|+||.++|+...+++|.+++.+-++ + ++...++++++++++
T Consensus 2 ~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~l~--------------------~----------~~~~~li~at~~~sg 51 (415)
T TIGR00801 2 PPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAPLS--------------------A----------EQTQYLVSISLLTSG 51 (415)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--------------------H----------HHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999886543 2 458999999999999
Q ss_pred HHHHHHHHHhcCCCccCCccchh-HHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHh--h-hHHHHHhcCChhHH
Q 039363 105 IGSFAMGILANLPLGLAPGMGAN-AYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAF--G-LRAQLARLIPQPVR 180 (521)
Q Consensus 105 igtll~g~~a~~P~~~~p~~G~~-a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~--~-l~g~l~~~iP~~V~ 180 (521)
++|++|+++.|.|..+.+.||.+ +++++.+....+ ++|+.++++++++|+++++++++ | .|+|++|++||.|+
T Consensus 52 i~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~~~---~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~ 128 (415)
T TIGR00801 52 IGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIGSG---LGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVT 128 (415)
T ss_pred HHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhH
Confidence 99999999998887778888888 888887765443 68999999999999999999985 3 47899999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCCh-hHHHHHHHHHHHHHHHHhhcccc-
Q 039363 181 LACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRS-PTFWLGLAGFLITCYGLMKEIKG- 258 (521)
Q Consensus 181 ~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~l~~~~l~l~~~l~~~~ip~- 258 (521)
.+++.+||+.++.+++++.. |. ..++++ +++.+ +++.+++.++++++ +..|+.|+
T Consensus 129 g~iv~~IGl~L~~i~l~~~~--g~-~~~~~~-------------------~~~~~~~~~~vg~~~l~~~v-l~~~~~~g~ 185 (415)
T TIGR00801 129 GPVVMLIGLSLIPVAVKMAA--GG-EAAMSS-------------------ATYGSLENLGVAFVVLALII-LLNRFGKGF 185 (415)
T ss_pred HHhHHHHHHHHHHHHHHHhc--cC-CCcccc-------------------cccCchhhHHHHHHHHHHHH-HHHHHHhhH
Confidence 99999999999999999862 22 111110 12222 34667777777543 33343333
Q ss_pred ----hhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhhHHHHHHHHHHHHHHHH
Q 039363 259 ----SMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVALATLLYVDVLA 334 (521)
Q Consensus 259 ----aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~~~~lv~~~e 334 (521)
++++++++++++++.+|. .|+++ ... .+|+++|++.++.+++|++ .+..++.+++++++|
T Consensus 186 ~~~~aiLigiv~g~i~a~~lg~--~~~~~--v~~------~~~~~lP~~~~~g~~f~~~------~~~~~~~i~lv~~~e 249 (415)
T TIGR00801 186 LKSISILIGILVGYILALFMGI--VDFSP--VID------APWFSLPTPFTFGPSFEWP------AILTMLPVAIVSLVE 249 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC--ccchh--hcc------CcccccCCccCCCceecHH------HHHHHHHHHHHHHHH
Confidence 679999999999999985 44432 111 1467788765322245553 345567889999999
Q ss_pred HHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhhhhhhhh-cCcccchHHHHHHHHHHHH-Hh
Q 039363 335 TTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIR-EGGRTGLTAVIVGLYFFIS-LF 412 (521)
Q Consensus 335 tigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~-~GarTgla~v~~g~~~ll~-lf 412 (521)
++|+.+++++++|. |.|+ +++.||++.+||++|+++++||++|+|+|+||++-++ +|.+||++..++|+++++. ++
T Consensus 250 s~g~~~a~a~~~g~-~~~~-~~~~~r~l~adGl~~i~aglfG~~p~t~~sen~g~~~~T~~~sr~~~~~~a~~~i~~~l~ 327 (415)
T TIGR00801 250 SIGDITATADVSGR-DLSG-DPRLHRGVLADGLATLLAGLFGGFPNTTFAQNIGVIALTRVASRWVIVGAAVILIALGFF 327 (415)
T ss_pred hhhHHHHHHHHhCC-CCCC-CccccchHHHhhHHHHHHHhcCCCCCcchhhhheeeeecCCCchHHHHHHHHHHHHHHHH
Confidence 99999999987752 2222 6789999999999999999999999999999987775 6899999888888888876 66
Q ss_pred --HHHHHhhcChhhHHHH-HHHHHHHHHHHhhhh---ccccchhHH----HHHHHH--HHHHHHHH----HHHHHHHHHH
Q 039363 413 --FTPLLTSVPPWAVGPS-LVMVGVMMMKVVKDI---DWGSIKHAV----PAFVTI--LLMPLTYS----IAYGIIGGIG 476 (521)
Q Consensus 413 --l~pli~~IP~~al~~a-LI~vG~~m~~~i~~i---~~~~~~~~~----~a~vti--i~~~lt~~----i~~GI~~G~i 476 (521)
+.++++.+|.++++++ ++++|.+...++|.+ ++++.++.. +..+.+ ...|..++ +.+|+.+|.+
T Consensus 328 pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l~~~~~~~~r~~~i~~~s~~~g~~~~~~p~~~~~~p~~~~g~~~g~~ 407 (415)
T TIGR00801 328 PKIAALITSIPSPVLGGASIVMFGMIAASGIRILIRNKLDNRRNRNIIAASVGLGLGVTGVPDIFGNFPLLLSGIALAGI 407 (415)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCccCcccceehHHHHHHHHHHHhccHHHHhhCchhcccHHHHHH
Confidence 7889999999999999 568888888877765 333233332 112211 12343332 4689999999
Q ss_pred HHHHHHH
Q 039363 477 LYIALSL 483 (521)
Q Consensus 477 ~~i~l~l 483 (521)
+++++|+
T Consensus 408 ~ai~Ln~ 414 (415)
T TIGR00801 408 VAILLNL 414 (415)
T ss_pred HHHHHhc
Confidence 9999986
No 5
>PRK11660 putative transporter; Provisional
Probab=100.00 E-value=1.9e-40 Score=366.02 Aligned_cols=389 Identities=17% Similarity=0.213 Sum_probs=288.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHhhhc---CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHHH
Q 039363 25 SCFTKELRAGTATFLTMAYIITVNATIIADS---GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVL 101 (521)
Q Consensus 25 ~~~~~ei~aGl~~~lam~y~~~v~P~ila~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~l 101 (521)
.++++|++||++..+.+ .|+.+++| |+| | ++| +.
T Consensus 27 ~~l~~D~iAGltv~~~~------iPq~mayA~lag~p--------------------p-~~G----------------Ly 63 (568)
T PRK11660 27 ARFTRDLIAGITVGIIA------IPLAMALAIASGVP--------------------P-QYG----------------LY 63 (568)
T ss_pred HhhhHHHHHHHHHHHHH------HHHHHHHHHHcCCC--------------------h-HHH----------------HH
Confidence 47999999999998654 69999996 664 3 322 47
Q ss_pred HHHHHHHHHHHHhcCCCc-cCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCChhHH
Q 039363 102 SAMIGSFAMGILANLPLG-LAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVR 180 (521)
Q Consensus 102 ~a~igtll~g~~a~~P~~-~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~~l~g~l~~~iP~~V~ 180 (521)
++.++++++++++..|.. .+|...+..+. ..+..+ ++++.+..+++++|++|+++|++|+ |++.||+|++|+
T Consensus 64 sa~~~~~vyal~Gss~~~~~Gp~a~~~~~~-~~~~~~-----~~~~~~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi 136 (568)
T PRK11660 64 TAAVAGIVIALTGGSRFSVSGPTAAFVVIL-YPVSQQ-----FGLAGLLVATLMSGIILILMGLARL-GRLIEYIPLSVT 136 (568)
T ss_pred HHHHHHHHHHHhcCCCCcccChhHHHHHHH-HHHHHH-----hhHHHHHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHH
Confidence 788888888888766654 57754443333 233332 4567788899999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccceecCC-Cchhh-HhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHHHH--Hhhcc
Q 039363 181 LACAAGIGLFIAFVGLQLHQGVGLVGPD-PSTLL-TITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYG--LMKEI 256 (521)
Q Consensus 181 ~G~~~gIGl~I~~igL~~~~glGi~~~~-~~~~~-~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~~l--~~~~i 256 (521)
.||++|+|++|+..|++.. +|+...+ +..+. .+.... ...++.++++..+++.++++++.+ +.+|+
T Consensus 137 ~Gf~~g~al~I~~~Ql~~~--lG~~~~~~~~~~~~~l~~~~--------~~l~~~~~~~~~~~~~~l~lll~~~~~~~~i 206 (568)
T PRK11660 137 LGFTSGIGIVIATLQIKDF--FGLQMAHVPEHYLEKVGALF--------QALPTINWGDALIGIVTLGVLILWPRLKIRL 206 (568)
T ss_pred HHHHHHHHHHHHHHHHHHh--cCCCCCCCCccHHHHHHHHH--------HhhccCCHHHHHHHHHHHHHHHHHHhhcccC
Confidence 9999999999999999987 6765421 22111 111000 023467788888888888876665 45678
Q ss_pred cchhHHHHHHHHHHHHHhcCc---ccccCC--------------CCCCCccccccccccccCc----cccccccccccch
Q 039363 257 KGSMIYGILFVTLISWIRGTA---VTYFPH--------------SPQGDANYNYFQKIVDFHK----IQSTAGVISFTNF 315 (521)
Q Consensus 257 p~aiLigIivgtvia~~lg~~---v~~~~~--------------~~~g~~~~~~~~~~~~lP~----~~~~~~~~d~~~~ 315 (521)
|++ ++++++++++++.++.. +..+++ .|.+.|+ +.+|. +...+.++||+.+
T Consensus 207 P~~-li~iiv~t~~~~~~~~~~~~v~~vg~~~~~~~~~g~~~~~ip~~~p~-------~~~p~~~~~~~~~~~~~~~~~~ 278 (568)
T PRK11660 207 PGH-LPALLAGTAVMGVLNLLGGHVATIGSRFHYVLADGSQGNGIPPLLPQ-------FVLPWNLPGADGQPFTLSWDLI 278 (568)
T ss_pred chH-HHHHHHHHHHHHHHhccCCCceeecccccccccccccccCCCCCCCC-------CCCCccccccccccCCcCHHHH
Confidence 988 89999999999988742 111111 1111111 11121 0000123466655
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccc-hhhhhhhhhhcCc
Q 039363 316 NHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIA-TYVESSAGIREGG 394 (521)
Q Consensus 316 ~~~~~~~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~t-s~~~Sa~~v~~Ga 394 (521)
. .+++.++.+.++.++|++.+.++++++ ++++.|.|||+.++|++|+++++||++|++ +++||+.|.++||
T Consensus 279 ~--~ll~~a~~iaiv~~iesl~~~~~~~~~------~~~~~d~n~EL~a~G~aNi~~~~fgg~p~~~s~srSa~n~~aGa 350 (568)
T PRK11660 279 R--ALLPAAFSMAMLGAIESLLCAVVLDGM------TGTKHSANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAGA 350 (568)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCCCCcHHHHHHhHHHHHHHHhCcccccchHHHHHHHHhcCC
Confidence 3 567778888899999998877777653 245678999999999999999999999988 7799999999999
Q ss_pred ccchHHHHHHHHHHHH-HhHHHHHhhcChhhHHHHHHHHHHHHHHH--hhhhccc-cchhHHHHHHHHHHHHHHHHHHHH
Q 039363 395 RTGLTAVIVGLYFFIS-LFFTPLLTSVPPWAVGPSLVMVGVMMMKV--VKDIDWG-SIKHAVPAFVTILLMPLTYSIAYG 470 (521)
Q Consensus 395 rTgla~v~~g~~~ll~-lfl~pli~~IP~~al~~aLI~vG~~m~~~--i~~i~~~-~~~~~~~a~vtii~~~lt~~i~~G 470 (521)
|||++++++++++++. +++.|++++||.++++++++++|+.|+.. +++.-|+ ++.|......+++ +.+.+++..|
T Consensus 351 rT~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~~~~~m~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~g 429 (568)
T PRK11660 351 TSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMS-LTVLFDMVIA 429 (568)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhhHHHHHHHHHhCCHHHHHHHHHHHH-HHHHHhHHHH
Confidence 9999999999999987 78999999999999999999999999843 3333232 3445555544443 4456799999
Q ss_pred HHHHHHHHHHHHHHhhhhhh
Q 039363 471 IIGGIGLYIALSLYDCVVGL 490 (521)
Q Consensus 471 I~~G~i~~i~l~l~~~~~~~ 490 (521)
+.+|+++++++.++|.+|+.
T Consensus 430 i~~Gi~~s~~~~~~~~~~~~ 449 (568)
T PRK11660 430 ISVGIVLASLLFMRRIAEMT 449 (568)
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999998763
No 6
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=100.00 E-value=1.4e-39 Score=358.93 Aligned_cols=400 Identities=17% Similarity=0.189 Sum_probs=296.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHhhhc---CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHHH
Q 039363 25 SCFTKELRAGTATFLTMAYIITVNATIIADS---GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVL 101 (521)
Q Consensus 25 ~~~~~ei~aGl~~~lam~y~~~v~P~ila~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~l 101 (521)
+++++|++||+++.+.. +|+.+++| |+| | ++| +.
T Consensus 12 ~~l~~Di~aGltv~~~~------iP~~~ayA~laglp--------------------p-~~G----------------Ly 48 (563)
T TIGR00815 12 KKFKGDLMAGLTVGILL------IPQAMAYAILAGLS--------------------P-IYG----------------LY 48 (563)
T ss_pred HHhhhHHHHHHHHHHHH------HHHHHHHHHHcCCC--------------------c-hhh----------------hH
Confidence 46999999999998644 69999996 775 3 333 36
Q ss_pred HHHHHHHHHHHHhcCCCc-cCCccchhHHHHHHHHhhhCCCC----chHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCC
Q 039363 102 SAMIGSFAMGILANLPLG-LAPGMGANAYLAYNLVGFHGSGS----ISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIP 176 (521)
Q Consensus 102 ~a~igtll~g~~a~~P~~-~~p~~G~~a~~~~~vv~~~g~~~----~~~~~al~a~~l~Gli~lllg~~~l~g~l~~~iP 176 (521)
++.+..+++++++..|.. .+|...+ +.+...++..++... ..++.+..+++++|++|+++|++|+ |++.+|+|
T Consensus 49 sa~~~~iv~alfGss~~~i~Gp~a~~-sl~~~~~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is 126 (563)
T TIGR00815 49 TSFVPPFIYALFGTSRDIAIGPVAVM-SLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLS 126 (563)
T ss_pred HHHHHHHHhheecCCCcccCCHHHHH-HHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhh
Confidence 778888888888776664 4675433 333344454444211 2467888999999999999999999 99999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccccceecC--CCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHHHH--H
Q 039363 177 QPVRLACAAGIGLFIAFVGLQLHQGVGLVGP--DPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYG--L 252 (521)
Q Consensus 177 ~~V~~G~~~gIGl~I~~igL~~~~glGi~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~~l--~ 252 (521)
++|+.||++|+|+.|+..|++.+ +|+... ..+.+..+..... +....+++|+++..+++.+++++... +
T Consensus 127 ~~Vi~Gf~~g~a~~i~~~Ql~~~--~G~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~i~~~~~~~l~~~~~~ 199 (563)
T TIGR00815 127 HAVISGFMTGAAITIGLSQLKGL--LGISIFNTRTDTLGVVISTWA-----GLPNTHNWNWCTLVIGLVLLLFLLYTKKL 199 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hCCCCCCCCCChHHHHHHHHH-----HhhhccccchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998 676431 1111111100000 00000133677777777666654443 2
Q ss_pred hhc--------ccchhHHHHHHHHHHHHHhcCc---ccccCCCCCCCccccccccccccCccccccccccccchhhhHHH
Q 039363 253 MKE--------IKGSMIYGILFVTLISWIRGTA---VTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVW 321 (521)
Q Consensus 253 ~~~--------ip~aiLigIivgtvia~~lg~~---v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~ 321 (521)
.+| +|.. |+.+++++++.+.++.+ +..+++.|.|++ .+. .+.+||+.+. .++
T Consensus 200 ~~~~~~~~~~~~p~~-li~vi~~~~~~~~~~~~~~~~~~~g~ip~g~p------------~~~--~~~~~~~~~~--~l~ 262 (563)
T TIGR00815 200 GKRNKKLLFAPAVAP-LLVVILATLAVTIGLHKKQGVSILGHIPSGLS------------FFP--PITLDWELLP--TLA 262 (563)
T ss_pred hhhccchhcccccHH-HHHHHHHHHHHHHHccCCCCeEEEeecCCCCC------------CCC--CCCCCHHHHH--HHH
Confidence 222 2666 89999999988887432 122333343432 111 1234665553 577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccc-hhhhhhhhhhcCcccchHH
Q 039363 322 VALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIA-TYVESSAGIREGGRTGLTA 400 (521)
Q Consensus 322 ~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~t-s~~~Sa~~v~~GarTgla~ 400 (521)
+..+++.++.++|++.+.++++++ ++++.|.|||+.++|++|+++++||++|.+ +++||+.|.++|+||++++
T Consensus 263 ~~a~~ia~v~~~e~l~~a~~~~~~------~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~G~~t~~a~ 336 (563)
T TIGR00815 263 PDAIAIAIVGLIESIAIARSFARM------TGYKIDANQELVAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSG 336 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------hCCCCCCcHHHHHhhHHHHHHHHhCccCCCCcchHHHHHHhcCCcchHHH
Confidence 888999999999999999998764 356789999999999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHH-HhHHHHHhhcChhhHHHHHHHHHHHHH--HHhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039363 401 VIVGLYFFIS-LFFTPLLTSVPPWAVGPSLVMVGVMMM--KVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGL 477 (521)
Q Consensus 401 v~~g~~~ll~-lfl~pli~~IP~~al~~aLI~vG~~m~--~~i~~i~~~~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~ 477 (521)
+++++++++. +++.|++.++|.++++++++++++.+. ..++++.+.++.|.....++++.+ +.+++..|+.+|+.+
T Consensus 337 i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~l~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~Gi~vGv~~ 415 (563)
T TIGR00815 337 VVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGV-VFTSIEIGLLVGVAL 415 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhcccCHHHHHHHHcCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 9999999887 888999999999999999999999865 234444334566776666666555 345999999999999
Q ss_pred HHHHHHHhhhhhhhHHHhhhhhh
Q 039363 478 YIALSLYDCVVGLVRCFLKLRRM 500 (521)
Q Consensus 478 ~i~l~l~~~~~~~~~~~~~~~~~ 500 (521)
++++.++|.+||+..+++|+|+.
T Consensus 416 s~~~~~~~~~~p~~~~l~~~~~~ 438 (563)
T TIGR00815 416 SAAFLLLRIARPRGAVLGRVPGT 438 (563)
T ss_pred HHHHHHHhhcCCceeEeeecCCC
Confidence 99999999999999999998754
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=1.1e-38 Score=338.92 Aligned_cols=368 Identities=18% Similarity=0.248 Sum_probs=274.8
Q ss_pred HHHHHHHHHHHHhhhhhHhhhc-CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHHHHHHHHHHHHH-
Q 039363 34 GTATFLTMAYIITVNATIIADS-GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVLSAMIGSFAMG- 111 (521)
Q Consensus 34 Gl~~~lam~y~~~v~P~ila~a-G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~l~a~igtll~g- 111 (521)
|+||.++|+...+++|.+++++ |+| + ++...++++++++++++|++|.
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~--------------------~----------~~~~~~i~at~l~sgi~tllq~~ 50 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLS--------------------A----------EQTAYLISADLFACGIATLIQTL 50 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCC--------------------H----------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999998 886 3 3588999999999999999994
Q ss_pred -H---HhcCCCccCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCChhHHHHHHHHH
Q 039363 112 -I---LANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGI 187 (521)
Q Consensus 112 -~---~a~~P~~~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~gI 187 (521)
+ .+|+|+.++|++ +++++.+.... +++|+.++++++++|+++++++ ++++|++|++|+.|+..+...+
T Consensus 51 ~~~~~G~~~P~~~g~s~---a~~~~~~~~~~---~~~~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~I 122 (406)
T TIGR03173 51 GIGPFGIRLPVVQGVSF---AAVGPMIAIGA---GGGLGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLI 122 (406)
T ss_pred cccccCCccceeecCcH---HHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHH
Confidence 2 379999999987 45555443322 3689999999999999999999 3569999999999988888899
Q ss_pred HHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCCh-hHHHHHHHHHHHHHHHHhhcccc-----hhH
Q 039363 188 GLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRS-PTFWLGLAGFLITCYGLMKEIKG-----SMI 261 (521)
Q Consensus 188 Gl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~l~~~~l~l~~~l~~~~ip~-----aiL 261 (521)
|+.+...++++.. | +.. . .++.+ +++.+++.++++++. +.|+.|+ ++|
T Consensus 123 Gl~l~~~~~~~~~--g----~~~----~---------------~~~~~~~~~~l~l~~l~~~il-~~~~~~~~~~~~aiL 176 (406)
T TIGR03173 123 GLSLMPVAINWAA--G----GAG----A---------------PDFGSPQNLGLALLTLVIILL-LNRFGKGFLRSIAVL 176 (406)
T ss_pred HHHHHHHHHHHhc--c----CCC----c---------------ccccchHHHHHHHHHHHHHHH-HHHHhhhHHHHhHHH
Confidence 9998888887641 1 100 0 02222 334577666665433 2333332 679
Q ss_pred HHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccc-cccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 039363 262 YGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQST-AGVISFTNFNHSEVWVALATLLYVDVLATTGTLY 340 (521)
Q Consensus 262 igIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~-~~~~d~~~~~~~~~~~~~~~~~lv~~~etigt~~ 340 (521)
+++++++++++.+|. .++++ .+.. +|+.+|++.++ .+++|++.+ ..++.+++++++|++++.+
T Consensus 177 i~ivvg~iva~~~g~--~~~~~--i~~~------~~~~~P~~~~~~~P~f~~~~~------~~~~~~~lv~~~esig~~~ 240 (406)
T TIGR03173 177 LGLVVGTIVAAALGM--VDFSG--VAEA------PWFALPTPFHFGAPTFDLVAI------LTMIIVYLVSMVETTGDFL 240 (406)
T ss_pred HHHHHHHHHHHHhcC--CCchh--hccC------CeeeCCCCCcCCCCeeCHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 999999999999985 34332 1211 35566654321 124555433 3456788999999999999
Q ss_pred HHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhhhhhhhh-cCcccchHHHHHHHHHHHH-Hh--HHHH
Q 039363 341 TMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIR-EGGRTGLTAVIVGLYFFIS-LF--FTPL 416 (521)
Q Consensus 341 ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~-~GarTgla~v~~g~~~ll~-lf--l~pl 416 (521)
+++++. |+|.|+++.||++.+||++|+++++||++|+|+|+||++.++ .|+|||++.+++|+++++. ++ +.++
T Consensus 241 a~~~~~---g~~~~~~~~~~~l~~~Gi~~i~aglfG~~p~t~~~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l 317 (406)
T TIGR03173 241 ALGEIT---GRPITEKDLAGGLRADGLGSALGGLFNTFPYTSFSQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAAL 317 (406)
T ss_pred HHHHHh---CCCCCchhccchHHhccHHHHHHHHhCCCCCcchhhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHH
Confidence 998764 355667889999999999999999999999999999987665 7999999998888888776 44 6889
Q ss_pred HhhcChhhHHHH-HHHHHHHHHHHhhh---hccccchhHHHHHH----HH--HHHH---------HHHHHHHHHHHHHHH
Q 039363 417 LTSVPPWAVGPS-LVMVGVMMMKVVKD---IDWGSIKHAVPAFV----TI--LLMP---------LTYSIAYGIIGGIGL 477 (521)
Q Consensus 417 i~~IP~~al~~a-LI~vG~~m~~~i~~---i~~~~~~~~~~a~v----ti--i~~~---------lt~~i~~GI~~G~i~ 477 (521)
++++|.++++++ +++++.+...+++. .||++++|.....+ .+ ...| +.+-+.+|+..|.++
T Consensus 318 ~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~~rn~~i~g~~~~~g~~~~~~p~~~~~~p~~~~~~~~~~~~~g~~~ 397 (406)
T TIGR03173 318 VASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDRRRNLLIVAVSLGLGLGPTVVPEFFSQLPAWAQTLFSSGIAVGAIS 397 (406)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccCcceehhhHHHHHHHHHHHhhHHHHHHChHHHHHHHhCcHHHHHHH
Confidence 999999999998 45677777766554 45666655432222 21 1333 223466899999999
Q ss_pred HHHHHHH
Q 039363 478 YIALSLY 484 (521)
Q Consensus 478 ~i~l~l~ 484 (521)
++++|+.
T Consensus 398 ai~l~~~ 404 (406)
T TIGR03173 398 AILLNLL 404 (406)
T ss_pred HHHHHhh
Confidence 9999875
No 8
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.8e-38 Score=331.79 Aligned_cols=395 Identities=18% Similarity=0.206 Sum_probs=293.6
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHhhhhhHhhhc-CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHH
Q 039363 18 FKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADS-GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLI 96 (521)
Q Consensus 18 f~~~~~~~~~~~ei~aGl~~~lam~y~~~v~P~ila~a-G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i 96 (521)
++..+++.+.+|.++.|+||+++|+...+++|.+++.+ +++ + |+...++
T Consensus 6 ~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~--------------------~----------~~~~~Li 55 (451)
T COG2233 6 YVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLS--------------------A----------EDTAYLI 55 (451)
T ss_pred cCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCC--------------------H----------HHHHHHH
Confidence 33344457899999999999999999999999999987 775 2 4689999
Q ss_pred HHHHHHHHHHHHHHHHH-----hcCCCccCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHhhhHH-H
Q 039363 97 VATVLSAMIGSFAMGIL-----ANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRA-Q 170 (521)
Q Consensus 97 ~at~l~a~igtll~g~~-----a~~P~~~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~~l~g-~ 170 (521)
+++++++|++|++|.+. +++|..+++++ ++++..+..... .+.+.+.++++.+.+|+++++++... + |
T Consensus 56 s~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sF---afi~p~i~~~~~-~g~~~~~~~G~ii~ag~~~~li~~~~--~~~ 129 (451)
T COG2233 56 SADLLASGIGTLLQLLGTGPGGSGLPSYLGSSF---AFVAPMIAIGGT-TGDGIAALLGGIIAAGLVYFLISPIV--KIR 129 (451)
T ss_pred HHHHHHHHHHHHHHHhhccCcccCCCeeEechH---HHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 99999999999999762 26788888864 344433322111 11348999999999999999999763 5 9
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCCh-hHHHHHHHHHHHHH
Q 039363 171 LARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRS-PTFWLGLAGFLITC 249 (521)
Q Consensus 171 l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~l~~~~l~l~~ 249 (521)
+.|++||.|+..++.-||+.++.++.+++. |-....+ .+++.+ .+++++..++++++
T Consensus 130 l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~--G~~~~~~--------------------~~~~~~~~~l~la~~tl~~il 187 (451)
T COG2233 130 LARLFPPVVTGPVVLVIGLSLAPVAINMAG--GGPGAAG--------------------NPDFGSLENLGLALVTLLIIL 187 (451)
T ss_pred HHHhCCCceEEeEeeeehhhhHHHHHHHhh--CCCCCCC--------------------CcccCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999988863 2110000 012222 24667777777655
Q ss_pred HHHhhcc-----cchhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhhHHHHHH
Q 039363 250 YGLMKEI-----KGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVAL 324 (521)
Q Consensus 250 ~l~~~~i-----p~aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~ 324 (521)
++ .+.. .-++|+|+++||++++++|. +|+.. +.++ +|+++|++.++..+|||..+ ..+
T Consensus 188 ~~-~~f~~g~~~~i~ILiGlv~G~~la~~~G~--vdf~~--v~~a------~w~~~P~~~~fg~~F~~~ai------l~m 250 (451)
T COG2233 188 LI-NRFGKGFLRRIPILIGLVVGYLLALFMGM--VDFSG--VAEA------PWFALPTPFYFGMAFDWGAI------LTM 250 (451)
T ss_pred HH-HHHhhhHHHHHHHHHHHHHHHHHHHHhCC--cCccc--cccC------ceeeCCcccCCCeeecHHHH------HHH
Confidence 54 2221 23789999999999999995 66654 3433 78999998754336777654 345
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCCC-cccCCceeeecchhhhhhhccCCCccchhhhhhhhhh-cCcccchHHHH
Q 039363 325 ATLLYVDVLATTGTLYTMAEIGGFVNEQGK-FEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIR-EGGRTGLTAVI 402 (521)
Q Consensus 325 ~~~~lv~~~etigt~~ala~~~g~~d~~~~-~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~-~GarTgla~v~ 402 (521)
+.+.++.+.|++|+.+++++..| +|.+ +++++|++++||++++++++||++|.|+|+||.+-++ .|.+||+....
T Consensus 251 ~~v~iV~~~E~~G~i~A~~~itg---~~~~~~~~l~rg~~aDGlat~iag~fg~~p~TtfaqNiGvv~lT~v~Sr~V~~~ 327 (451)
T COG2233 251 LPVAIVTIVEHTGDITATGEITG---RDLDGKPRLRRGLLADGLATLIAGLFGGFPNTTFAQNIGVVALTGVYSRYVIAG 327 (451)
T ss_pred HHHHHHHHHHHhhhhhhHHhHhC---CcCccCcccccceeeccHHHHHHHhcCCCCCCchhhceeeeeeccCChhHHHHH
Confidence 67788999999999999988664 4444 4899999999999999999999999999999999987 68888886666
Q ss_pred HHHHHHHHHh---HHHHHhhcChhhHHHH-HHHHHHHHHHHhhhh---cccc-chhHHHHHHHH------HHHHHHH---
Q 039363 403 VGLYFFISLF---FTPLLTSVPPWAVGPS-LVMVGVMMMKVVKDI---DWGS-IKHAVPAFVTI------LLMPLTY--- 465 (521)
Q Consensus 403 ~g~~~ll~lf---l~pli~~IP~~al~~a-LI~vG~~m~~~i~~i---~~~~-~~~~~~a~vti------i~~~lt~--- 465 (521)
.|++.++.-+ +.-+++.||.+++||+ ++++|++..+++|.+ |.++ ++|.+...+.+ ...|-.+
T Consensus 328 aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~Ia~sGir~l~~~~~~~~~~Nl~IvAvsl~~Gig~~~~p~~~~~~ 407 (451)
T COG2233 328 AAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGMIAASGIRILIRNKVDRSRRNLLIVAVSLGLGIGVGAVPEVFLQL 407 (451)
T ss_pred HHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHhcccccCccceeeehHHHHhCcchhcCchhhhhC
Confidence 6655555322 3448999999999999 789999999887754 3333 21442211111 1223223
Q ss_pred ------HHHHHHHHHHHHHHHHHHHhhhhhh
Q 039363 466 ------SIAYGIIGGIGLYIALSLYDCVVGL 490 (521)
Q Consensus 466 ------~i~~GI~~G~i~~i~l~l~~~~~~~ 490 (521)
-..+|+++|.++++++|+...-+++
T Consensus 408 p~~~~~l~~sGia~g~i~AIvLNlll~~~~~ 438 (451)
T COG2233 408 PAWLRPLLSSGIALGTLTAIVLNLLLPGEKR 438 (451)
T ss_pred cHHHHHHHhccHHHHHHHHHHHHHhcccccc
Confidence 2678999999999999998765544
No 9
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=2.3e-37 Score=329.95 Aligned_cols=333 Identities=16% Similarity=0.212 Sum_probs=246.4
Q ss_pred hccccccccccchhhHHHHHHHHHHHHHHHHhhhhhHhhhcCCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhh
Q 039363 15 GKHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSD 94 (521)
Q Consensus 15 ~~~f~~~~~~~~~~~ei~aGl~~~lam~y~~~v~P~ila~aG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 94 (521)
+..|+++|| .+++|.++.|+||+++|+...+++|.++ |+| + ..
T Consensus 2 ~~~~~~~~~-~p~~~~~~lglQhvl~m~~~~i~~Pli~---gl~--------------------~------------~~- 44 (428)
T PRK10720 2 RRAIGVSER-PPLLQTIPLSLQHLFAMFGATVLVPILF---HIN--------------------P------------AT- 44 (428)
T ss_pred CcccCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHhhc---CCC--------------------H------------HH-
Confidence 456888887 5889999999999999999999999988 664 2 11
Q ss_pred HHHHHHHHHHHHHHHHHHH--hcCCCccCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHh--hh-HH
Q 039363 95 LIVATVLSAMIGSFAMGIL--ANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAF--GL-RA 169 (521)
Q Consensus 95 ~i~at~l~a~igtll~g~~--a~~P~~~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~--~l-~g 169 (521)
+++++|++|++|.+. .|+|+.++|++ ++++...... ..+||.++++++++|+++++++++ |+ |+
T Consensus 45 ----~l~~sGi~TliQ~~~~g~rlP~~~G~sf---a~i~~~~~~~----~~~~~~~lgav~v~Glv~ills~~~~~~g~~ 113 (428)
T PRK10720 45 ----VLLFNGIGTLLYLFICKGKIPAYLGSSF---AFISPVLLLL----PLGYEVALGGFIMCGVLFCLVALIVKKAGTG 113 (428)
T ss_pred ----HHHHHHHHHHHHHHhccCccceEEeCcH---HHHHHHHHHH----HccHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 569999999999863 59999999964 3443332221 147999999999999999999997 32 68
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHH
Q 039363 170 QLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITC 249 (521)
Q Consensus 170 ~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~ 249 (521)
|++|+|||.|+..+++.||+.++..++++. |....++ +..+++++.+++++++++.
T Consensus 114 ~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~---g~~~~~~---------------------~~~~~~~~~lalv~l~iil 169 (428)
T PRK10720 114 WLDVLFPPAAMGAIVAVIGLELAGVAAGMA---GLLPAEG---------------------QTPDSKTIIISMVTLAVTV 169 (428)
T ss_pred HHHHhCChHHHHHHHHHHHHHhHHHHHhhc---cccCCCC---------------------cccchHHHHHHHHHHHHHH
Confidence 999999999988888888888887777643 2111000 1234456778888887665
Q ss_pred HH--Hhhccc--chhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhhHHHHHHH
Q 039363 250 YG--LMKEIK--GSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVALA 325 (521)
Q Consensus 250 ~l--~~~~ip--~aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~ 325 (521)
++ ..|+.. .+++++++++|++++.+|. .|++. .+.. +|+++|++. .++||+..+ ..++
T Consensus 170 ~~~~~~kg~~~~~~iLigIvvG~ila~~lG~--~d~~~--v~~a------~~~~lP~~~--~P~fd~~~i------l~l~ 231 (428)
T PRK10720 170 LGSVLFRGFLAIIPILIGVLVGYALSFAMGM--VDTTP--IIEA------HWFALPTFY--TPRFEWFAI------LTIL 231 (428)
T ss_pred HHHHHhccHHHHhHHHHHHHHHHHHHHHhcC--CCHHH--hhcC------ccccCCCCC--CCcCcHHHH------HHHH
Confidence 43 222221 1679999999999999985 34432 2211 456777753 235666543 2445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCC-CcccCCceeeecchhhhhhhccCCCccchhhhhhhhhhcCcccchHHHH--
Q 039363 326 TLLYVDVLATTGTLYTMAEIGGFVNEQG-KFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIREGGRTGLTAVI-- 402 (521)
Q Consensus 326 ~~~lv~~~etigt~~ala~~~g~~d~~~-~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~~GarTgla~v~-- 402 (521)
.++++.++|++|++.++++.. +++. ++++.||++++||++|+++++||++|+|+|+||.+ .+++||.++-.
T Consensus 232 ~~~lv~~~EsiG~~~a~~~~~---~~~~~~~~~~~r~l~adGlatii~glfG~~p~tty~en~g---~ia~T~v~sr~v~ 305 (428)
T PRK10720 232 PAALVVIAEHVGHLVVTANIV---KKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIG---VMAITRVYSTWVI 305 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHhh---CCCCCCCccccchHhhhhHHHHHHHhcCCCCccccccccc---eeeecccchhHHH
Confidence 666778999999999998754 3442 46789999999999999999999999999999876 55577776533
Q ss_pred --HHHHHHHHHh---HHHHHhhcChhhHHHH-HHHHHHHHHHHhhhh
Q 039363 403 --VGLYFFISLF---FTPLLTSVPPWAVGPS-LVMVGVMMMKVVKDI 443 (521)
Q Consensus 403 --~g~~~ll~lf---l~pli~~IP~~al~~a-LI~vG~~m~~~i~~i 443 (521)
++.++++..+ +.++++.||.++++++ ++++|.+...++|.+
T Consensus 306 ~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~Gi~~l 352 (428)
T PRK10720 306 GGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGASGIRVL 352 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455 6779999999999999 568888888777765
No 10
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=1.5e-36 Score=323.55 Aligned_cols=373 Identities=17% Similarity=0.175 Sum_probs=266.0
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHhhhhhHhhhcCCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhH
Q 039363 16 KHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADSGGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDL 95 (521)
Q Consensus 16 ~~f~~~~~~~~~~~ei~aGl~~~lam~y~~~v~P~ila~aG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 95 (521)
..|+++|| .+++|++++|+||+++|+|+.+++|.++ |+| + .
T Consensus 19 ~~~~~d~~-~p~~~~~~~GlQh~lam~~~~v~~Plil---gl~--------------------~------------~--- 59 (429)
T TIGR03616 19 HPVAPDER-LPAAQTIVMGLQHAVAMFGATVLMPLLM---GFD--------------------P------------N--- 59 (429)
T ss_pred cccCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHh---CCC--------------------H------------h---
Confidence 34777776 5889999999999999999999999998 564 2 1
Q ss_pred HHHHHHHHHHHHHHHHH--HhcCCCccCCccchhHHHHHHHHhhhC----CCCchHHHHHHHHHHHHHHHHHHHHhhhH-
Q 039363 96 IVATVLSAMIGSFAMGI--LANLPLGLAPGMGANAYLAYNLVGFHG----SGSISYQTAMAVVLVEGCAFLAISAFGLR- 168 (521)
Q Consensus 96 i~at~l~a~igtll~g~--~a~~P~~~~p~~G~~a~~~~~vv~~~g----~~~~~~~~al~a~~l~Gli~lllg~~~l~- 168 (521)
+++++++++|++|+. .+|+|+.++++. ++. ..+....+ ..+.+++.++++++++|+++++++++++|
T Consensus 60 --~tl~~sGi~TllQ~~~~G~rlP~v~G~sf---~f~-~~~~~~~~~~~~~~~~~~~~a~ga~iv~G~i~~llg~~~~~~ 133 (429)
T TIGR03616 60 --LTILMSGIGTLLFFLITGGRVPSYLGSSA---AFV-GAVIAATGYNGQGTNPNIALALGGIIACGLVYAAIGLVVMRT 133 (429)
T ss_pred --HHHHHHHHHHHHHHHHhCCCceeEEcCcH---HHH-HHHHHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999974 389999998864 222 22221111 11235799999999999999999998776
Q ss_pred --HHHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHH
Q 039363 169 --AQLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFL 246 (521)
Q Consensus 169 --g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~ 246 (521)
++++|++||.|+..++..||+.++..++++. + . ++++++...+.++.++
T Consensus 134 ~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~---~----~----------------------~~~~~~~al~tl~~i~ 184 (429)
T TIGR03616 134 GTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSV---S----A----------------------SGFDSWMAVLTILCIG 184 (429)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhc---c----c----------------------cccccHHHHHHHHHHH
Confidence 8999999999999999999999999888753 1 0 0223332223222222
Q ss_pred HHHHHHhhcc--cchhHHHHHHHHHHHHHh----cCc-ccccCCCCCCCccccccccccccCccccccccccccchhhhH
Q 039363 247 ITCYGLMKEI--KGSMIYGILFVTLISWIR----GTA-VTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSE 319 (521)
Q Consensus 247 l~~~l~~~~i--p~aiLigIivgtvia~~l----g~~-v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~ 319 (521)
+. .++.|+. +.++|+++++|+++++.+ |.. ..|++. ... ++|+++|++. .++||++.+
T Consensus 185 l~-~l~~~~~l~~~avLiGivvG~iva~~l~~~~g~~~~vd~s~--v~~------a~~~~lP~~~--~p~f~~~~i---- 249 (429)
T TIGR03616 185 AV-AVFTRGMLQRLLILVGLIAAYLAYFILTNVFGLGKAVDFSP--ISQ------AAWFGLPNFH--TPVFNANAM---- 249 (429)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccCcc--ccc------CccccCCcCC--CceEcHHHH----
Confidence 22 2233443 568899999999998875 311 133332 221 2578888764 235666543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhhhhhhhhcCcccchH
Q 039363 320 VWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIREGGRTGLT 399 (521)
Q Consensus 320 ~~~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~~GarTgla 399 (521)
..++.+++++++|++|+..++++..+ ++ .+++.+|++++||++|++++++|++|.|+|+||.+ .+++||.+
T Consensus 250 --l~~~~~~lv~~~esiG~~~a~~~~~~---~~-~~~~i~r~l~adGl~t~~agl~g~~p~tt~~en~g---~i~~T~v~ 320 (429)
T TIGR03616 250 --LLIAPVALILVAENLGHFKAVAGMTG---RN-LDPYMGRAFVGDGLATMLSGSVGGTGVTTYAENIG---VMAVTKVY 320 (429)
T ss_pred --HHHHHHHHHHHHHhhHHHHHHHHHhC---CC-CCchhccchhhhhHHHHHHHhcCCCCCcceeeeee---eeeecCcc
Confidence 44567788999999999999988654 22 23468999999999999999999999999999776 55577776
Q ss_pred H---HHHHHHHHHHHhHHH----HHhhcChhhHHHH-HHHHHHHHHHHhhhh-----ccccchhHHH----HHHHHHHHH
Q 039363 400 A---VIVGLYFFISLFFTP----LLTSVPPWAVGPS-LVMVGVMMMKVVKDI-----DWGSIKHAVP----AFVTILLMP 462 (521)
Q Consensus 400 ~---v~~g~~~ll~lfl~p----li~~IP~~al~~a-LI~vG~~m~~~i~~i-----~~~~~~~~~~----a~vtii~~~ 462 (521)
+ +..+.++++.+.+.| +++.||.++++|+ ++++|.+..+++|.+ |+++++|.+. ..+.+..++
T Consensus 321 SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~l~~~~~d~~~~rn~~ivg~sl~~g~g~~~ 400 (429)
T TIGR03616 321 STLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARIWVQNKVDLTQNGNLIMVAVTLVLGAGDFA 400 (429)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCccceeehhHHHHHHHhHHHH
Confidence 3 334444455577888 8999999999999 568898888887743 4444444432 222222222
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHhh
Q 039363 463 L--TYSIAYGIIGGIGLYIALSLYDC 486 (521)
Q Consensus 463 l--t~~i~~GI~~G~i~~i~l~l~~~ 486 (521)
. ..-..+|+..|.++++++|+...
T Consensus 401 ~~~~~~~~s~i~~~~~~ai~Ln~~l~ 426 (429)
T TIGR03616 401 LTIGAFTLGGIGTATFGAIVLNALLN 426 (429)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHhcC
Confidence 2 22245899999999999998864
No 11
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=1.1e-32 Score=292.85 Aligned_cols=382 Identities=16% Similarity=0.156 Sum_probs=268.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHhhhc-CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHHHHHHHH
Q 039363 28 TKELRAGTATFLTMAYIITVNATIIADS-GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATVLSAMIG 106 (521)
Q Consensus 28 ~~ei~aGl~~~lam~y~~~v~P~ila~a-G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~l~a~ig 106 (521)
+|.++.|+||+++|+...+++|.+++++ |+| + ++...+++++++++|++
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~--------------------~----------~~~~~li~~~l~~sGIa 57 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLP--------------------Q----------SSLLTLTQYAFLATALA 57 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--------------------H----------HHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998 885 3 35889999999999999
Q ss_pred HHHHHH-HhcCCCccCCccchhHHHHHHHHhhhCC--CCchHHHHHH----HHHHHHHHHHHHHHhhhHHHHHhcCChhH
Q 039363 107 SFAMGI-LANLPLGLAPGMGANAYLAYNLVGFHGS--GSISYQTAMA----VVLVEGCAFLAISAFGLRAQLARLIPQPV 179 (521)
Q Consensus 107 tll~g~-~a~~P~~~~p~~G~~a~~~~~vv~~~g~--~~~~~~~al~----a~~l~Gli~lllg~~~l~g~l~~~iP~~V 179 (521)
|++|++ ..|+|+.++|+.. ++...+...... .+..++..++ +.+++|++++++|.+++.+|++|++||.|
T Consensus 58 TllQ~~~G~rlPiv~G~Sf~---~~~~~~~i~~~~~~~g~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV 134 (433)
T PRK11412 58 CFAQAFCGHRRAIMEGPGGL---WWGTILTITLGEASRGTPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMV 134 (433)
T ss_pred HHHHHhcCCCCeeeeCCchH---HHHHHHHHHhcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 999985 5799999999752 332111111110 1123656666 59999999999999998899999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHHHH--Hhhc--
Q 039363 180 RLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCYG--LMKE-- 255 (521)
Q Consensus 180 ~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~~l--~~~~-- 255 (521)
...++.-||+.+...++++.. |...+... +. ++.+...+.+++.++.++..+ +.|+
T Consensus 135 ~G~vv~lIGlsL~~~a~~~~~--G~~~~~~~---~~---------------~~~~~~~~~~a~~~l~~il~~~~~~~g~~ 194 (433)
T PRK11412 135 MVVFMLLLGAQLTTIFFKGML--GLPFGIAD---PN---------------GKIQLPPFGLSVAVMCLVLAMIIFLPQRI 194 (433)
T ss_pred hhHhHHHHHHhhHHHHHHHhc--CCCccCcc---cc---------------cccchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 999999999999988888652 31000000 01 121222344555555443333 2222
Q ss_pred ccchhHHHHHHHHHHH-HHhcCcccccCCCCCCCccccccccccccCccccccc-cccccchhhhHHHHHHHHHHHHHHH
Q 039363 256 IKGSMIYGILFVTLIS-WIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAG-VISFTNFNHSEVWVALATLLYVDVL 333 (521)
Q Consensus 256 ip~aiLigIivgtvia-~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~-~~d~~~~~~~~~~~~~~~~~lv~~~ 333 (521)
...++|+|+++||+++ +.+|. |+.. .+.. +|..+| +. .+ +||+..+ ..++...++.+.
T Consensus 195 ~~~svLiGiv~G~v~a~~~~g~---d~~~--v~~a------~w~~~p-fG--~P~~F~~~~i------l~~~~~~lv~~~ 254 (433)
T PRK11412 195 ARYSLLVGTIVGWILWAFCFPS---SHSL--SGEL------HWQWFP-LG--SGGALEPGII------LTAVITGLVNIS 254 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---Ccch--hccC------Cceeec-CC--CCCccCHHHH------HHHHHHHHHHHH
Confidence 1348899999999985 46664 3332 2332 232222 10 12 2666543 345566788899
Q ss_pred HHHHHHHHHHHhcccccCCCC-cccCCceeeecchhhhhhhccCCCccchhhhhhhhhh-cCcccchHHHHHHHHHHHHH
Q 039363 334 ATTGTLYTMAEIGGFVNEQGK-FEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIR-EGGRTGLTAVIVGLYFFISL 411 (521)
Q Consensus 334 etigt~~ala~~~g~~d~~~~-~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~-~GarTgla~v~~g~~~ll~l 411 (521)
|++|+..+.++..+ +|.+ +++.+|++.+||++|+++++||++|+|+|+||++-++ .|.++|+.....|+++++.-
T Consensus 255 e~iG~~~a~~~~~~---~~~~~~~~l~rgi~~dGi~s~laglfg~~p~tt~sqNvGvi~~TgV~SR~v~~~aa~ilillg 331 (433)
T PRK11412 255 NTYGAIRGTDVFYP---QQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYRRRSFIYGSVMCLLVA 331 (433)
T ss_pred HHHHHHHHHHHHhC---CCCCCCcccccchhhccHHHHHHHhcCCCCCCchhhhhhhhhhcCCchhHHHHHHHHHHHHHH
Confidence 99999999987543 4433 6799999999999999999999999999999999887 68889987777777776653
Q ss_pred h---HHHHHhhcChhhHHHH-HHHHHHHHHHHhhh---hccccchhHHHH----HHHHH--HHHH-HH---------HHH
Q 039363 412 F---FTPLLTSVPPWAVGPS-LVMVGVMMMKVVKD---IDWGSIKHAVPA----FVTIL--LMPL-TY---------SIA 468 (521)
Q Consensus 412 f---l~pli~~IP~~al~~a-LI~vG~~m~~~i~~---i~~~~~~~~~~a----~vtii--~~~l-t~---------~i~ 468 (521)
+ +..+++.||.++++++ ++++|.+...++|. .|++++ |.+.. .+.+. ..|- .+ -+.
T Consensus 332 l~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~~~~~~~r-n~~ivg~sl~~Glg~~~~p~~~~~~~P~~~~~~l~ 410 (433)
T PRK11412 332 LIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQQITFTAR-NIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLS 410 (433)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc-cchhhHHHHHHHhhHHhCCHHHHHHChHHHHHHHc
Confidence 3 3348999999999999 57889888877665 455433 43221 22221 2231 11 256
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 039363 469 YGIIGGIGLYIALSLYDC 486 (521)
Q Consensus 469 ~GI~~G~i~~i~l~l~~~ 486 (521)
+|+..|.++++++|....
T Consensus 411 sgi~~g~l~AilLn~~~~ 428 (433)
T PRK11412 411 NGLLVGILLAVLMENLIP 428 (433)
T ss_pred CcHHHHHHHHHHHHhhcC
Confidence 899999999999998763
No 12
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=311.52 Aligned_cols=396 Identities=18% Similarity=0.237 Sum_probs=281.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhHhhhc---CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhhhhHHHHHH
Q 039363 24 KSCFTKELRAGTATFLTMAYIITVNATIIADS---GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTRSDLIVATV 100 (521)
Q Consensus 24 ~~~~~~ei~aGl~~~lam~y~~~v~P~ila~a---G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~at~ 100 (521)
+.++..|+++|+++. +..+||-+++| |+ |++|| +
T Consensus 77 ~~~l~~DliaGltvg------~l~VPQ~iaYa~la~l---------------------ppiyG--------L-------- 113 (665)
T KOG0236|consen 77 KEWLLGDLIAGLTVG------SLSVPQGLAYALLAGL---------------------PPIYG--------L-------- 113 (665)
T ss_pred hhhchHHHhcCceee------eeecchHHHHHHHcCC---------------------ChHHH--------H--------
Confidence 368999999999986 45689999996 55 33444 2
Q ss_pred HHHHHHHHHHHHH-hcCCCccCCccchhHHHHHHHHh----hhC---CCCchHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 039363 101 LSAMIGSFAMGIL-ANLPLGLAPGMGANAYLAYNLVG----FHG---SGSISYQTAMAVVLVEGCAFLAISAFGLRAQLA 172 (521)
Q Consensus 101 l~a~igtll~g~~-a~~P~~~~p~~G~~a~~~~~vv~----~~g---~~~~~~~~al~a~~l~Gli~lllg~~~l~g~l~ 172 (521)
.++.++.+++.++ +-.++.+||- +...+....++. ... .....++.+...++++|++|+++|++|+ |++.
T Consensus 114 Yssf~~~~iY~~fGtsr~isiG~~-av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~l~Giiq~~mG~lrL-Gfl~ 191 (665)
T KOG0236|consen 114 YSSFFPPLIYAIFGTSRHVSIGPF-AVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTFLTGIIQLILGLLRL-GFLV 191 (665)
T ss_pred HHHHHHHHHheeccCCCcccccHH-HHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhc-ChHH
Confidence 5666777777654 3466777773 222233332221 111 0125789999999999999999999999 9999
Q ss_pred hcCChhHHHHHHHHHHHHHHHHhhhhcccccee-cCCCchhhHhhhcCCCCCCcccccCCCCC--hhHHHHHHHHHHHHH
Q 039363 173 RLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLV-GPDPSTLLTITACADNDPVTGACIGGKMR--SPTFWLGLAGFLITC 249 (521)
Q Consensus 173 ~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~p~~~l~~~~l~l~~ 249 (521)
+|+|++++.||+.|+|+.|...|++.. +|+. .++.......- ........+.. +.++.+++..++++.
T Consensus 192 ~~lS~~~l~GFt~gaa~~I~~sQlk~l--lGi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~l~~L~ 262 (665)
T KOG0236|consen 192 RFLSEPALSGFTTGAALHIVTSQLKVL--LGITSFPRHSGPGSIV-------FIVFDLLANLPKTLATLVLSLIFLVVLL 262 (665)
T ss_pred HHccHHHHhHhhhhhhhhhhHHhhHhh--ccccccCCCCCceeEE-------EeeHHhhhcccccchhhhhHHHHHHHHH
Confidence 999999999999999999999999988 6775 22211110000 00000000111 234555555544433
Q ss_pred HH--Hh----hc-----ccchhHHHHHHHHHHHHHhcCccc----ccCCCCCCCccccccccccccCccccccccccccc
Q 039363 250 YG--LM----KE-----IKGSMIYGILFVTLISWIRGTAVT----YFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTN 314 (521)
Q Consensus 250 ~l--~~----~~-----ip~aiLigIivgtvia~~lg~~v~----~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~ 314 (521)
.. +. ++ +|.. ++.++++|++++.+..+.. ..+++|.|.+.+ ++|.+. +..
T Consensus 263 ~~k~~~~~~~~k~~~v~~~~~-li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~-------~lp~~~-------~~~ 327 (665)
T KOG0236|consen 263 LTKELNPKFKKKLFSVPIPFE-LIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPP-------SLPPLS-------LTP 327 (665)
T ss_pred HHHHhhhhhcccceeecccHH-HHHHHHHHHHHHHhccccccCCeeeccCCCCCCCC-------CCCChh-------hhH
Confidence 22 11 12 2334 8999999999999875311 122344444321 333322 111
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccc-hhhhhhhhhhcC
Q 039363 315 FNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIA-TYVESSAGIREG 393 (521)
Q Consensus 315 ~~~~~~~~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~t-s~~~Sa~~v~~G 393 (521)
..+...+.+.++.+.|+++..++.+++ ++...|.|||++|.|++|++|++|+++|+| +|+||++|.++|
T Consensus 328 ----~~~~~~~~i~iva~~~~iai~k~fa~~------~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG 397 (665)
T KOG0236|consen 328 ----QVIPDAFAIAIVALLEHIAIGKSFASL------HGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSG 397 (665)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcC
Confidence 234556677888999999999988864 345678999999999999999999999988 999999999999
Q ss_pred cccchHHHHHHHHHHHH-HhHHHHHhhcChhhHHHHHHHHHHHHHHHhh---hhcc-ccchhHHHHHHHHHHHHHHHHHH
Q 039363 394 GRTGLTAVIVGLYFFIS-LFFTPLLTSVPPWAVGPSLVMVGVMMMKVVK---DIDW-GSIKHAVPAFVTILLMPLTYSIA 468 (521)
Q Consensus 394 arTgla~v~~g~~~ll~-lfl~pli~~IP~~al~~aLI~vG~~m~~~i~---~i~~-~~~~~~~~a~vtii~~~lt~~i~ 468 (521)
+||++++++.+++++++ +++.|++.++|.++++++++..+.-|+.+.+ ++ | .++.|.++...++..+ +.+++.
T Consensus 398 ~~T~~s~i~~~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~l-wr~~k~D~~~~~~t~~~~-i~~~ve 475 (665)
T KOG0236|consen 398 GRTQVAGIVSAALVLLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPL-WRLSKIDLLIWVVTFFTT-IFLSLE 475 (665)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhh-eeCCHHHHHHHHHHhhee-eEehhh
Confidence 99999999999999997 8899999999999988887776666665444 34 5 4677777776665443 455899
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhh
Q 039363 469 YGIIGGIGLYIALSLYDCVVGLVRCFLKLRRM 500 (521)
Q Consensus 469 ~GI~~G~i~~i~l~l~~~~~~~~~~~~~~~~~ 500 (521)
.|+.+|+..+++.-+.|..||+..+++++++-
T Consensus 476 ~Glligv~~s~~~ii~~~~~p~~~~l~~~~~t 507 (665)
T KOG0236|consen 476 IGLLIGVAFSLFFIILRSQRPRISLLGRIPRT 507 (665)
T ss_pred hhHHHHHHHHHHHHHHHhcCcchhhhcccCCC
Confidence 99999999999999999999999999987763
No 13
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=6.3e-28 Score=243.74 Aligned_cols=244 Identities=23% Similarity=0.345 Sum_probs=178.2
Q ss_pred HHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceec-CCCchhhH-hhhcCCCCCCcccccCCC-CChhHH
Q 039363 162 ISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVG-PDPSTLLT-ITACADNDPVTGACIGGK-MRSPTF 238 (521)
Q Consensus 162 lg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~p~~ 238 (521)
+|++|+ |++.||+|++|+.||++|+|++|+..|++.. +|+.. .+.+...+ +.... ....+ .+++++
T Consensus 1 lGllrl-G~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~--~G~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 69 (280)
T PF00916_consen 1 LGLLRL-GFLVRFIPRPVISGFLAGIAILIIFSQLPNL--LGIPVVPSHEGLFSFIRALF--------QLISTITNWPTL 69 (280)
T ss_pred Cccccc-cHHHHHccHHHHHHHHHHHHHHHHHHHHHHH--Hhcccccccccccchhhhhh--------hhhhhccchhhh
Confidence 367898 9999999999999999999999999999998 56541 11111111 10000 00112 355566
Q ss_pred HHHHHHHHHHHHH--Hh--------hcccchhHHHHHHHHHHHHHhcCcc---cccCCCCCCCccccccccccccCcccc
Q 039363 239 WLGLAGFLITCYG--LM--------KEIKGSMIYGILFVTLISWIRGTAV---TYFPHSPQGDANYNYFQKIVDFHKIQS 305 (521)
Q Consensus 239 ~l~~~~l~l~~~l--~~--------~~ip~aiLigIivgtvia~~lg~~v---~~~~~~~~g~~~~~~~~~~~~lP~~~~ 305 (521)
.++..++.++... .. +++|.. ++.+++++++++..+.+. ..+++.|.+.|.+ .+|+
T Consensus 70 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~p~~-li~vv~~~~~~~~~~~~~~~v~~~~~i~~~lp~~-------~~p~--- 138 (280)
T PF00916_consen 70 AIGLVALVFLLIIRLLPKRLPSRFWPPIPAP-LIVVVLGTLLSWLFLLDKYGVAIVGEIPSGLPPP-------SLPS--- 138 (280)
T ss_pred hhhhHHHHHHhhhhhhhhhcccccccccccc-ceeeehhhhhhhhhhhccccccccccccccCccc-------cCcc---
Confidence 6665555543332 22 135666 888999999988876432 2233433343321 2332
Q ss_pred ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccc-hhh
Q 039363 306 TAGVISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIA-TYV 384 (521)
Q Consensus 306 ~~~~~d~~~~~~~~~~~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~t-s~~ 384 (521)
.++||+.+. ..++..+++.++.++|++.+.+++++ +++++.|.|||++++|++|+++++|||+|.+ +++
T Consensus 139 --~~~~~~~~~--~~~~~a~~ia~v~~~~s~~~~~~~~~------~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~s 208 (280)
T PF00916_consen 139 --FDISWSLIL--DLLPTALAIAIVGFIESLLIAKSIAK------KTGYRIDPNQELIALGLANIVSGLFGGMPGSGSFS 208 (280)
T ss_pred --ccccccccc--ccchhHHHHHHHHHHHHHHhhhhhcc------cccccCCcHHHHHHhhhccccchhhcccccccccc
Confidence 134565543 45666778889999999998887765 3456779999999999999999999999988 999
Q ss_pred hhhhhhhcCcccchHHHHHHHHHHHH-HhHHHHHhhcChhhHHHHHHHHHHHHH
Q 039363 385 ESSAGIREGGRTGLTAVIVGLYFFIS-LFFTPLLTSVPPWAVGPSLVMVGVMMM 437 (521)
Q Consensus 385 ~Sa~~v~~GarTgla~v~~g~~~ll~-lfl~pli~~IP~~al~~aLI~vG~~m~ 437 (521)
||+.|.++|+|||+++++++++.++. +++.|+++++|.++++++++++|+.+.
T Consensus 209 rs~~~~~~Ga~t~~s~~~~~~~~l~~l~~~~~~l~~iP~~~La~ili~~~~~l~ 262 (280)
T PF00916_consen 209 RSAVNYRAGARTRLSGLISALFVLLVLLFLAPLLAYIPKAVLAAILIVVGISLI 262 (280)
T ss_pred cchHHHhcCcceeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999887 888999999999999999999999965
No 14
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.83 E-value=8.1e-18 Score=175.85 Aligned_cols=368 Identities=17% Similarity=0.162 Sum_probs=227.0
Q ss_pred hhhHHHHhhhhhccccccccccchhhHHHHHHHHHHHHHHHHhhhhhHhhh---cCCCccccCCCCCCCCCCCCCCCCCC
Q 039363 4 GLNEAVSKSFIGKHFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIAD---SGGTCSVADCSVPMNQTASPDCTLKP 80 (521)
Q Consensus 4 ~~~~~~~~~~~~~~f~~~~~~~~~~~ei~aGl~~~lam~y~~~v~P~ila~---aG~~~~~~~~~~~~~~~~~~~~~~~~ 80 (521)
|-|++--++..-|++++.- ..+.+|+...+.-+-.-+ ..++.. .|++ +
T Consensus 3 ~~~~~~~~~~~~r~~~~~~------s~~~aG~va~lvg~~~~~--~iv~~a~~~~g~s--------------------~- 53 (395)
T TIGR00843 3 RCLKAIKHDVSLRLASIPP------PTLIAGFLAVLIGYAGPA--AIFFQAAIKAGAS--------------------T- 53 (395)
T ss_pred hhHHhhccccceecccCch------HHHHHHHHHHHHhccchH--HHHHHHHHHcCCC--------------------H-
Confidence 4455555555556666433 367788888775433222 222332 3765 3
Q ss_pred CcccchhhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHH
Q 039363 81 NVGYENCLAKTRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFL 160 (521)
Q Consensus 81 ~~g~~~~~~~~~~~~i~at~l~a~igtll~g~~a~~P~~~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~l 160 (521)
++....+.+..+.++++|+++.++.|.|+.++.+---.+++.. .. .+++|..+.++.+++|++.+
T Consensus 54 ---------aq~~swl~a~~~~~Gl~ti~lS~~~r~Pi~~awStPGaAll~~----~~--~~~~~~eavGAfiv~g~lil 118 (395)
T TIGR00843 54 ---------AMIIGWITAIGIAAAVSGIFLSIRFKTPVLTAWSAPGAALLVT----GF--PGISLNEAIAAFITAAALIF 118 (395)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeecCchHHHHHHH----hc--CCCCHHHHHHHHHHHHHHHH
Confidence 3588899999999999999999999999999876322233321 11 23789999999999999999
Q ss_pred HHHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHH
Q 039363 161 AISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWL 240 (521)
Q Consensus 161 llg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l 240 (521)
++|++|..+|++|+||+++..++.+|+.+-.....++. . .+.| ++
T Consensus 119 llGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a----------------~-----------------~~~p--ll 163 (395)
T TIGR00843 119 LCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAA----------------L-----------------DGLF--LI 163 (395)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH----------------H-----------------HHhH--HH
Confidence 99999999999999999999999999876543211111 0 0122 22
Q ss_pred HHHHHHHHHHHHhhc-cc-chhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhh
Q 039363 241 GLAGFLITCYGLMKE-IK-GSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHS 318 (521)
Q Consensus 241 ~~~~l~l~~~l~~~~-ip-~aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~ 318 (521)
+. ..+..++..|| .| .++++++++|+++++..|. .+.++ .... +..|.+ +.++||+.....
T Consensus 164 ~~--~mll~~l~~~r~~Pr~avl~aLlvG~iva~~~G~--~~~~~--~~~~--------l~~p~~--~~P~fs~~a~~~- 226 (395)
T TIGR00843 164 CF--SMLLCWLASKAFAPRYAMIAALICGIAFSFALGD--MNPTD--LDFK--------IALPQF--IAPDFSFAHSLN- 226 (395)
T ss_pred HH--HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcC--CCccc--cccc--------ccccee--eCCCCCHHHHHH-
Confidence 21 11222233333 34 3579999999999999885 22221 1100 011222 123456665432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCc------cc-hhhhhhhhhh
Q 039363 319 EVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSP------IA-TYVESSAGIR 391 (521)
Q Consensus 319 ~~~~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P------~t-s~~~Sa~~v~ 391 (521)
..+.++.+.+.. .++.+++.. +..|++++.++.+..+|++|++++.||+.+ ++ -+....++.+
T Consensus 227 ----l~lPl~~vtm~~--qnlpgiavl----~aaGy~~p~~~~~~~tGl~sll~ApfGg~~~nlaaitaAic~G~~ah~d 296 (395)
T TIGR00843 227 ----LALPLFLVSLAG--QFAPGIAAL----KAAGYNAPAKPIIAAAGLAALFAAFAGGISIGIAAITAAICMGKDAHED 296 (395)
T ss_pred ----HHHHHHHHHHHh--cCchHHHHH----HHcCCCCCchHHHHHHHHHHHHHhccCCchhhhhHHhHHHhcCcccccC
Confidence 223333333322 244444431 134566778999999999999999999999 44 4555555555
Q ss_pred cCcccchHHHHHHHHHHHH-Hh---HHHHHhhcChhhHHHH--HHHHHHHHHHHhhhhccccchhHHHHHHHHHHHH---
Q 039363 392 EGGRTGLTAVIVGLYFFIS-LF---FTPLLTSVPPWAVGPS--LVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMP--- 462 (521)
Q Consensus 392 ~GarTgla~v~~g~~~ll~-lf---l~pli~~IP~~al~~a--LI~vG~~m~~~i~~i~~~~~~~~~~a~vtii~~~--- 462 (521)
++|+..+++..|++.++. +| +..++..+|.+.+... +-+.|.++. ++.. ..+|.+++-++.+|++.+-
T Consensus 297 -~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~-~l~~-a~~~~~~r~~a~~tflvtaSg~ 373 (395)
T TIGR00843 297 -KDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAG-NIKI-ALHEDQERDAALIAFLATASGL 373 (395)
T ss_pred -cCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHH-HhcCcchhHHHHHHHHHHHhcC
Confidence 788888899999998886 44 3458999998754333 333344333 1221 1334444445555554322
Q ss_pred -HH--HHHHHHHHHHHHHHHH
Q 039363 463 -LT--YSIAYGIIGGIGLYIA 480 (521)
Q Consensus 463 -lt--~~i~~GI~~G~i~~i~ 480 (521)
+. .+=-.|+..|.+.+.+
T Consensus 374 ~~~gigaafWgl~~G~~~~~~ 394 (395)
T TIGR00843 374 HFLGIGSAFWGLCAGGLAYFI 394 (395)
T ss_pred CcccccHHHHHHHHHHHHHHh
Confidence 11 1234688888777654
No 15
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=99.81 E-value=1.2e-17 Score=174.30 Aligned_cols=355 Identities=17% Similarity=0.182 Sum_probs=235.5
Q ss_pred cccccccccchhhHHHHHHHHHHHHHHHHhhhhhHhhhc-CCCccccCCCCCCCCCCCCCCCCCCCcccchhhhhhh-hh
Q 039363 17 HFKLEVRKSCFTKELRAGTATFLTMAYIITVNATIIADS-GGTCSVADCSVPMNQTASPDCTLKPNVGYENCLAKTR-SD 94 (521)
Q Consensus 17 ~f~~~~~~~~~~~ei~aGl~~~lam~y~~~v~P~ila~a-G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~ 94 (521)
.|++++. .+....++.|+||.++|.-..+++|.+++.+ +.. + ++. ..
T Consensus 2 ~y~i~d~-P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g--------------------~----------~~~~~~ 50 (510)
T KOG1292|consen 2 HYCINDN-PPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGG--------------------D----------EEKAVQ 50 (510)
T ss_pred ccCCCCC-CCchHHHHhccchHHHHhhhhhhhhhhhcccccCC--------------------h----------HHHHHH
Confidence 3667774 5788999999999999999999999999886 432 1 124 88
Q ss_pred HHHHHHHHHHHHHHHHHH-HhcCCCccCCccchhHHHHHHHHhhh----CC----CC-------chHHHHHHHHHHHHHH
Q 039363 95 LIVATVLSAMIGSFAMGI-LANLPLGLAPGMGANAYLAYNLVGFH----GS----GS-------ISYQTAMAVVLVEGCA 158 (521)
Q Consensus 95 ~i~at~l~a~igtll~g~-~a~~P~~~~p~~G~~a~~~~~vv~~~----g~----~~-------~~~~~al~a~~l~Gli 158 (521)
+++.+++++|+.|++|.. ..|+|+.++|++ +|+........ .. .+ .-+|..-++.++++++
T Consensus 51 lIsT~~f~sGI~TllQt~fG~RLp~v~G~Sf---afl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~v 127 (510)
T KOG1292|consen 51 LISTIFFVSGITTLLQTTFGTRLPLVQGPSF---AFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLV 127 (510)
T ss_pred HHHHHhhhccHHHHHHHHhhcccccccccce---ehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHH
Confidence 999999999999999985 579999999976 34443322111 00 01 1256788999999999
Q ss_pred HHHHHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHH
Q 039363 159 FLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTF 238 (521)
Q Consensus 159 ~lllg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~ 238 (521)
|.++|++++.+.+.||+.|..+.-.++-+|+-+.-.+.++. +. ++
T Consensus 128 qiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~~~----------------~~--------------~w----- 172 (510)
T KOG1292|consen 128 QIILGFSGLWGNLLRFIGPLTIVPLVALVGLGLFQDGFPKL----------------GK--------------HW----- 172 (510)
T ss_pred HHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhhHHhhhhhh----------------hh--------------he-----
Confidence 99999999999999999999988877777765443333321 10 11
Q ss_pred HHHHHHHHHHHH--HH--h-h------cc----cchhHHHHHHHHHHHHHhcCccccc-CCCC--CC-Ccccc-----cc
Q 039363 239 WLGLAGFLITCY--GL--M-K------EI----KGSMIYGILFVTLISWIRGTAVTYF-PHSP--QG-DANYN-----YF 294 (521)
Q Consensus 239 ~l~~~~l~l~~~--l~--~-~------~i----p~aiLigIivgtvia~~lg~~v~~~-~~~~--~g-~~~~~-----~~ 294 (521)
-+++..++++++ .+ . + |. .-++++++.++..+++++-. .+. +..+ .+ ..+-+ ..
T Consensus 173 eI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~--tgay~~~~~~t~~~~RTD~~~vi~~ 250 (510)
T KOG1292|consen 173 EISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTI--TGAYPYKPTTTQSSCRTDRNGVISS 250 (510)
T ss_pred eecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHh--ccccCCCccccCCcccccHhhhhcc
Confidence 022222221111 12 1 1 11 13678999999999888732 111 1000 00 00000 01
Q ss_pred ccccccCccccccc--cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhh
Q 039363 295 QKIVDFHKIQSTAG--VISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVG 372 (521)
Q Consensus 295 ~~~~~lP~~~~~~~--~~d~~~~~~~~~~~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~ 372 (521)
++|+.+|.|.. +| .+|... ...+....++.++|++|+..+.++.++ .+.-..+.+||+..-||++++++
T Consensus 251 apWi~vPyP~Q-wG~P~f~~~~------~f~m~aa~~va~iES~G~y~a~ar~~~--a~ppP~~~inRgi~~eGig~lL~ 321 (510)
T KOG1292|consen 251 APWIRVPYPFQ-WGPPTFSAGL------VFAMMAASLVAMIESTGDYIACARLSS--ATPPPPSVLNRGIGWEGIGSLLA 321 (510)
T ss_pred CCceeecCCCc-cCCCcccHHH------HHHHHHHHHHHHHHhcchHHHHHHHhc--CCCCChhhhhhhhhhhhHHHHHH
Confidence 37888988754 33 334332 345567778899999999998887543 12233567899999999999999
Q ss_pred hccCCCc-cchhhhhhhhhhcCcccchHH---HHHHHHHHH-H-Hh--HHHHHhhcChhhHHHHH-HHHHHHHHHHhhh-
Q 039363 373 SALGVSP-IATYVESSAGIREGGRTGLTA---VIVGLYFFI-S-LF--FTPLLTSVPPWAVGPSL-VMVGVMMMKVVKD- 442 (521)
Q Consensus 373 ~lfG~~P-~ts~~~Sa~~v~~GarTgla~---v~~g~~~ll-~-lf--l~pli~~IP~~al~~aL-I~vG~~m~~~i~~- 442 (521)
|++|+-. .|+++||++-.. -|++.+ +-.+..|++ . ++ |..+++.||.+..|+.+ +++++....++..
T Consensus 322 gl~G~gtG~Tt~~ENigll~---vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnL 398 (510)
T KOG1292|consen 322 GLFGTGTGSTTSVENIGLLG---VTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNL 398 (510)
T ss_pred HhhCCCccceeeccceeeEe---eeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999985 669999887655 455543 333333333 3 44 78899999999988884 6666666555444
Q ss_pred --hccccchhHHHH
Q 039363 443 --IDWGSIKHAVPA 454 (521)
Q Consensus 443 --i~~~~~~~~~~a 454 (521)
.|.+..+|....
T Consensus 399 Qf~dlns~RNl~Il 412 (510)
T KOG1292|consen 399 QFVDLNSSRNLFIL 412 (510)
T ss_pred eeeccccccchhhh
Confidence 455555665433
No 16
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.51 E-value=4e-11 Score=123.91 Aligned_cols=319 Identities=18% Similarity=0.246 Sum_probs=191.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCccCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 039363 91 TRSDLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGLRAQ 170 (521)
Q Consensus 91 ~~~~~i~at~l~a~igtll~g~~a~~P~~~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~~l~g~ 170 (521)
+...-+.+-.+..++.++..++..|.|+..+=+.--.++.... . .+++|+.+.++-+++|++.++.|++|+.+|
T Consensus 39 q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AWStPGaAlL~~~-~-----~~~~~~eavGAfl~~~~Li~l~G~tg~~~r 112 (378)
T PF03594_consen 39 QIASWLFALYLGMGLTSILLSLRYRMPIVTAWSTPGAALLATS-L-----PGYSFAEAVGAFLVAGALILLLGVTGLFGR 112 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcchHHHHHHHHh-c-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666777888999999999999999999876221112333211 1 247899999999999999999999999999
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHHHHH
Q 039363 171 LARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLITCY 250 (521)
Q Consensus 171 l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l~~~ 250 (521)
++|.||+++..++.+|+-+-.. ++.. ..+. ++|. +....+ ..+
T Consensus 113 l~~~IP~~ia~AMLAGvLl~f~---l~~f-------------~a~~-----------------~~P~--l~~~ml--~~~ 155 (378)
T PF03594_consen 113 LMRRIPPPIASAMLAGVLLPFG---LAAF-------------TALQ-----------------ADPL--LVGPML--AVF 155 (378)
T ss_pred HHHHCCHHHHHHHHHHHHHHHH---HHHH-------------HHHH-----------------hHHH--HHHHHH--HHH
Confidence 9999999999999998864322 2211 0010 1232 221111 222
Q ss_pred HHhhc-c-cchhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhhHHHHHHHHHH
Q 039363 251 GLMKE-I-KGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVALATLL 328 (521)
Q Consensus 251 l~~~~-i-p~aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~~~~ 328 (521)
+..|| . +.+++.+++++.++++..|. .+..+ .. ..+|++....++|||+.+.. ..+.++
T Consensus 156 l~~~r~~pr~av~~al~~g~~~a~~~g~--~~~~~--~~----------~~~~~p~~~~P~Fs~~a~v~-----lalPL~ 216 (378)
T PF03594_consen 156 LLARRFSPRYAVLAALVAGVAVAALTGQ--LHPSA--LQ----------LSLAHPVFTTPEFSWSALVS-----LALPLF 216 (378)
T ss_pred HHHHHHcchhHHHHHHHHHHHHHHhcCC--CCccc--cc----------cccceeEEECCcccHHHHHH-----HHHHHH
Confidence 22222 2 23678889999998888774 22221 11 12233222234677877643 233444
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhhhhhhh---hcCc--ccch-HHHH
Q 039363 329 YVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGI---REGG--RTGL-TAVI 402 (521)
Q Consensus 329 lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v---~~Ga--rTgl-a~v~ 402 (521)
++.+. .-++.+++. ++.+|.+++.|+-+..-|++|++.+.||+.++.--.-+++-. |++. +.|+ +++.
T Consensus 217 ivtma--sQnlpG~aV----L~a~GY~~p~~~~~~~tGl~s~l~ApfGg~~~nlAaitaAIc~g~eah~dp~rRy~Aav~ 290 (378)
T PF03594_consen 217 IVTMA--SQNLPGIAV----LRAAGYQPPVNPLITVTGLASLLAAPFGGHAVNLAAITAAICAGPEAHPDPSRRYIAAVA 290 (378)
T ss_pred HHHHH--hcchHHHHH----HHHcCCCCCchHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHcCCccCCCcccchHHHHH
Confidence 44432 123344432 123466788899999999999999999999976222232222 2332 3454 6788
Q ss_pred HHHHHHHH-Hh---HHHHHhhcChhhHHHH--HHHHHHHHHHHhhhhccccchhHHHHHHHHHHHH----HH--HHHHHH
Q 039363 403 VGLYFFIS-LF---FTPLLTSVPPWAVGPS--LVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMP----LT--YSIAYG 470 (521)
Q Consensus 403 ~g~~~ll~-lf---l~pli~~IP~~al~~a--LI~vG~~m~~~i~~i~~~~~~~~~~a~vtii~~~----lt--~~i~~G 470 (521)
.|++.++. +| +..++...|.+.+... +-+.|.+.. +++. .++|.++..++.+|++.+- +. .+=-.|
T Consensus 291 ~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~~-sl~~-A~~~~~~r~aAlvtFlvtaSGisl~gIgaafWg 368 (378)
T PF03594_consen 291 AGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLGG-SLQT-AFSDEKYREAALVTFLVTASGISLLGIGAAFWG 368 (378)
T ss_pred HhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-HHHH-HhcCcchhHHHHHHHHHHHcCCCcccccHHHHH
Confidence 88888876 44 3458899998643322 223333332 2221 1344444455656554322 11 123467
Q ss_pred HHHHHHHHH
Q 039363 471 IIGGIGLYI 479 (521)
Q Consensus 471 I~~G~i~~i 479 (521)
+..|.+++.
T Consensus 369 Lv~G~~~~~ 377 (378)
T PF03594_consen 369 LVAGLLVHL 377 (378)
T ss_pred HHHHHHHHh
Confidence 888877764
No 17
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=1.2e-08 Score=103.75 Aligned_cols=323 Identities=18% Similarity=0.279 Sum_probs=192.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCccC---CccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHhhh
Q 039363 91 TRSDLIVATVLSAMIGSFAMGILANLPLGLA---PGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAFGL 167 (521)
Q Consensus 91 ~~~~~i~at~l~a~igtll~g~~a~~P~~~~---p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~~l 167 (521)
+...-+.+-.+..++.|+...+..|.|+..+ ||. +++. .+. .++++..+.++-+++|.+.++.|++|.
T Consensus 54 q~aSwl~al~l~mGv~ti~Ls~~yR~Pv~~aWSTPG~---all~----asl--~g~s~~eaVGAfiVt~~li~l~G~~~~ 124 (402)
T COG3135 54 QIASWLTALGLAMGVSTLTLSLRYRVPVLTAWSTPGA---ALLV----ASL--GGLSFAEAVGAFIVTGALIILCGLTGP 124 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccceeeeecCccH---HHHH----hcc--CCCCHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3556677778889999999999999999875 652 2221 221 357899999999999999999999999
Q ss_pred HHHHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccccCCCCChhHHHHHHHHHHH
Q 039363 168 RAQLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGACIGGKMRSPTFWLGLAGFLI 247 (521)
Q Consensus 168 ~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~l~~~~l~l 247 (521)
.+|+++.||+++..+..+||=+-. +++-.+ .+ -.+|.+... .++
T Consensus 125 l~rl~~~IP~sla~AmlAGILL~F---~l~a~~-------------a~-----------------~~~p~l~lp---mv~ 168 (402)
T COG3135 125 LTRLMRIIPPSLAAAMLAGILLRF---GLKAFK-------------AL-----------------PTQPLLVLP---MVL 168 (402)
T ss_pred HHHHHHhCChHHHHHHHHHHHHHH---HHHHHh-------------cc-----------------CCChHHHHH---HHH
Confidence 999999999999999988874332 333210 00 012222111 111
Q ss_pred HHHHHhhcc-cchhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccccccccccchhhhHHHHHHHH
Q 039363 248 TCYGLMKEI-KGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQSTAGVISFTNFNHSEVWVALAT 326 (521)
Q Consensus 248 ~~~l~~~~i-p~aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~~ 326 (521)
...+.+... +.++...+++|..++...|.. ++ +... ...+.|++- .++|++.++.+ ..+.
T Consensus 169 ~~ll~r~f~pr~aV~aalvvgv~va~~~G~~----~~---~~~~-----~~~~~p~~v--~P~Fs~~A~l~-----lalP 229 (402)
T COG3135 169 AYLLARVFAPRYAVIAALVVGVLVAALLGDL----HT---ALVA-----LEISTPTWV--TPEFSFAAMLS-----LALP 229 (402)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHhCcc----cc---cccc-----cccCcceee--CCcccHHHHHH-----HhHH
Confidence 212222222 347788899999999998852 11 1100 011334432 23566666543 3345
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhhhhhhhhcC------cccchHH
Q 039363 327 LLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVESSAGIREG------GRTGLTA 400 (521)
Q Consensus 327 ~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~Sa~~v~~G------arTgla~ 400 (521)
++++.|.. -++-+++ .++.+|.+++.+--+.+-|+.++.++.||+..++--.-|++-+... .|-=.++
T Consensus 230 L~lvtmas--QN~pGiA----vLka~gY~pp~~pl~~~TGl~sll~ApfG~~t~nLaAItAAic~gpdaHpD~~rry~Aa 303 (402)
T COG3135 230 LFLVTMAS--QNLPGIA----VLKAAGYQPPPSPLIVATGLASLLSAPFGGHTVNLAAITAAICTGPDAHPDPARRYTAA 303 (402)
T ss_pred HHHHHHHh--ccCccce----eehhcCCCCCCchHHHHhHHHHHHhcccccceecHHHHHHHHhcCCCCCCChHHHHHHH
Confidence 54444321 1222222 2334677788888899999999999999999887333344333322 3334567
Q ss_pred HHHHHHHHHH-Hh---HHHHHhhcChhhHHHHHHHHHHHHHHHhhh---hccccchhHHHHHHHHHHHH--HH-H---HH
Q 039363 401 VIVGLYFFIS-LF---FTPLLTSVPPWAVGPSLVMVGVMMMKVVKD---IDWGSIKHAVPAFVTILLMP--LT-Y---SI 467 (521)
Q Consensus 401 v~~g~~~ll~-lf---l~pli~~IP~~al~~aLI~vG~~m~~~i~~---i~~~~~~~~~~a~vtii~~~--lt-~---~i 467 (521)
.+.|++-++. +| +.-++...|.+-+.. +.|.-++..++. ..++|.++...+.+++..+. ++ + +=
T Consensus 304 ~~agi~ylv~GlF~~~~~~l~~alP~~li~~---lAGLALlg~~~~~l~~A~~~~~~R~aAlvtF~VTaSG~tl~GIgaa 380 (402)
T COG3135 304 LVAGIFYLLAGLFGGALVGLMAALPASLIAA---LAGLALLGTLGNSLQAALKDEREREAALVTFLVTASGLTLFGIGAA 380 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCcHHHHHH---HHHHHHHHHHHHHHHHHhcCcccchhhhhheeehhccceeecccHH
Confidence 8888888876 44 345788899864222 233333322221 11233333334444443221 11 1 34
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 039363 468 AYGIIGGIGLYIALSLYDC 486 (521)
Q Consensus 468 ~~GI~~G~i~~i~l~l~~~ 486 (521)
..|+..|.+.+.+++..|.
T Consensus 381 fWGLvaG~~~~~L~~~~~~ 399 (402)
T COG3135 381 FWGLVAGLLVLALLNLRRR 399 (402)
T ss_pred HHHHHHHHHHHHHHhhhhc
Confidence 5789999988888776553
No 18
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.40 E-value=7.9e-05 Score=85.69 Aligned_cols=327 Identities=15% Similarity=0.161 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCccchhHHHHH---HHHhhhCCCCchH-HHHHHHHHHHHHHHHHHHHhhhHHHH
Q 039363 96 IVATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAY---NLVGFHGSGSISY-QTAMAVVLVEGCAFLAISAFGLRAQL 171 (521)
Q Consensus 96 i~at~l~a~igtll~g~~a~~P~~~~p~~G~~a~~~~---~vv~~~g~~~~~~-~~al~a~~l~Gli~lllg~~~l~g~l 171 (521)
+.=+++++.++++++++++.-|+.+--.-|...++-+ .+....+ ..| +......+.+.++.++++.+.. .++
T Consensus 403 v~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~---~~yl~~~~WigiW~~~~~~lla~~~~-s~l 478 (900)
T TIGR00834 403 VSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNG---LEYLVGRVWIGLWLVLLVLLLVATEG-SFL 478 (900)
T ss_pred HHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcC---CchHHHHHHHHHHHHHHHHHHHHHhH-HHH
Confidence 3445688889999999999999976322233333333 3343332 333 6677788999999999999998 899
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCch-hhHhhhcCC--C--C---C-------------CcccccC
Q 039363 172 ARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPST-LLTITACAD--N--D---P-------------VTGACIG 230 (521)
Q Consensus 172 ~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~-~~~~g~~~~--~--~---~-------------~~~~~~~ 230 (521)
+||+.+----.|..=|+++-+.-+++.. ..+....+.. -.+...|.. . . + ....|..
T Consensus 479 vryiTRFTeEiFa~lIs~IFI~eai~~L--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 556 (900)
T TIGR00834 479 VRYISRFTQEIFSFLISLIFIYETFSKL--IKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRF 556 (900)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHH--HHHHhcCCcccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999998888887777676654 1111000000 000000000 0 0 0 0000000
Q ss_pred CCCCh--hHHHHHHHHHHHHHHHH-hhc---cc---------chhHHHHHHHHHHHHHhcCcccccCC--CCCCCccccc
Q 039363 231 GKMRS--PTFWLGLAGFLITCYGL-MKE---IK---------GSMIYGILFVTLISWIRGTAVTYFPH--SPQGDANYNY 293 (521)
Q Consensus 231 ~~~~~--p~~~l~~~~l~l~~~l~-~~~---ip---------~aiLigIivgtvia~~lg~~v~~~~~--~~~g~~~~~~ 293 (521)
..+. .++++++.++.+...+. .|+ .| .++.++|++.+.+.+.++. ++.+. .|.+.. ++.
T Consensus 557 -~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~--v~~~kl~Vp~~f~-pt~ 632 (900)
T TIGR00834 557 -QPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGD--TYTQKLSVPSGLK-VTN 632 (900)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhcc--CcccccCCCCCcC-CCC
Confidence 0111 12233333333333331 111 11 2567899999999988762 12221 111211 010
Q ss_pred c--ccccccCccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhh
Q 039363 294 F--QKIVDFHKIQSTAGVISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIV 371 (521)
Q Consensus 294 ~--~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii 371 (521)
+ ..|+ ++.+.. ...+.+.... .++.++ +.+++.-++|.--+..=+.+....+ ++ ...-+-.++..|+-|.+
T Consensus 633 p~~R~W~-i~p~~~-~~~~p~w~~~-~A~iPA-lll~ILiFmD~nIts~iv~~~e~kL-kK--gsgyH~Dllllg~~~~v 705 (900)
T TIGR00834 633 PSARGWF-IPPLGE-NRPFPWWMMF-AAALPA-LLVFILIFMEQQITTLIVSKKERKL-KK--GSGFHLDLLLVVGMGGV 705 (900)
T ss_pred CCCCCeE-Eccccc-cccccHHHHH-HHHHHH-HHHHHHHHHHhhhHHHHhcCccccC-CC--CcccchHHHHHHHHHHH
Confidence 1 1232 111100 0001111111 123333 3334445667543333111111111 11 12345567889999999
Q ss_pred hhccCCCccc-hhhhhhhhhhc----------C-------cc-cchHHHHHHHHHHHHHhHHHHHhhcChhhHHHHHHHH
Q 039363 372 GSALGVSPIA-TYVESSAGIRE----------G-------GR-TGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMV 432 (521)
Q Consensus 372 ~~lfG~~P~t-s~~~Sa~~v~~----------G-------ar-Tgla~v~~g~~~ll~lfl~pli~~IP~~al~~aLI~v 432 (521)
+|++|-.+.+ +..||...+++ | .| +|++++..++++.+++++.|++..||++|+.|+..+.
T Consensus 706 ~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLiglsv~~~PvL~~IP~aVL~GvFlYM 785 (900)
T TIGR00834 706 AALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGLSILMEPILKRIPLAVLFGIFLYM 785 (900)
T ss_pred HHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 9999998655 77777766642 2 11 6789999998887888899999999999999999988
Q ss_pred HHHHHHH
Q 039363 433 GVMMMKV 439 (521)
Q Consensus 433 G~~m~~~ 439 (521)
|+.-+.+
T Consensus 786 Gv~SL~G 792 (900)
T TIGR00834 786 GVTSLSG 792 (900)
T ss_pred HHhhccc
Confidence 8876643
No 19
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=98.29 E-value=0.00022 Score=80.62 Aligned_cols=328 Identities=15% Similarity=0.142 Sum_probs=180.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCccCCccchhHHH---HHHHHhhhCCCCchH-HHHHHHHHHHHHHHHHHHHhhhHH
Q 039363 94 DLIVATVLSAMIGSFAMGILANLPLGLAPGMGANAYL---AYNLVGFHGSGSISY-QTAMAVVLVEGCAFLAISAFGLRA 169 (521)
Q Consensus 94 ~~i~at~l~a~igtll~g~~a~~P~~~~p~~G~~a~~---~~~vv~~~g~~~~~~-~~al~a~~l~Gli~lllg~~~l~g 169 (521)
.-+.=+++++.+++++.++++.-|+.+-...|...++ .|.+....+ +.| +.-...++...++.++++.+.. .
T Consensus 392 ~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~---~dyl~~r~wVglW~~~l~illaa~~a-s 467 (876)
T KOG1172|consen 392 IGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNG---LDYLAFRAWVGLWTAFLLILLAATNA-S 467 (876)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCC---CchhhHHHHHHHHHHHHHHHHHHhhh-h
Confidence 3455677888999999999999998652222333322 233344443 333 5677889999999999999998 9
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhh-----Hhh-hcCCCC--CCcccccCCCCChh--HHH
Q 039363 170 QLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLL-----TIT-ACADND--PVTGACIGGKMRSP--TFW 239 (521)
Q Consensus 170 ~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~-----~~g-~~~~~~--~~~~~~~~~~~~~p--~~~ 239 (521)
.+++++.+.-=-.|..=|.++.+.-+++.. .++-...+.... ... ..+... .....+.....++. +++
T Consensus 468 ~lv~~~TRfteEiF~~LIs~iFi~eai~kl--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llsli 545 (876)
T KOG1172|consen 468 SLVKYITRFTEEIFGLLISLIFIYEAIKKL--IKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDTALLSLI 545 (876)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHH--HHHhhcCcccccccCCcccccccccccccCcccCCCcCCcchHHHHHH
Confidence 999999999999998888887777666633 111100000000 000 000000 00000000011111 122
Q ss_pred HHHHHHHHHHHH-Hhhc---cc---------chhHHHHHHHHHHHHHhcC-cccccCCCCCCCcccccc-ccccccCccc
Q 039363 240 LGLAGFLITCYG-LMKE---IK---------GSMIYGILFVTLISWIRGT-AVTYFPHSPQGDANYNYF-QKIVDFHKIQ 304 (521)
Q Consensus 240 l~~~~l~l~~~l-~~~~---ip---------~aiLigIivgtvia~~lg~-~v~~~~~~~~g~~~~~~~-~~~~~lP~~~ 304 (521)
+.+.++.+...+ -.|+ .| .++.++|++.+.+.+..+. ....++ .|...+....+ .+|+-.|.
T Consensus 546 l~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~-vp~~~~~t~~~~rgw~v~~~-- 622 (876)
T KOG1172|consen 546 LMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLP-VPSVFPPTWPFDRGWFVPPF-- 622 (876)
T ss_pred HHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccc-cCcCCCCCCcccCCeeeCCC--
Confidence 222222222122 1111 11 2567889999988888763 111111 11122111001 12322221
Q ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCCCCcccCCceeeecchhhhhhhccCCCccc-h
Q 039363 305 STAGVISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGG-FVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIA-T 382 (521)
Q Consensus 305 ~~~~~~d~~~~~~~~~~~~~~~~~lv~~~etigt~~ala~~~g-~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~t-s 382 (521)
++..|.... .+++++ +.+.+.-++|.--+.. ++++.+ .+ ++| ....-.++-.|+-|.++|++|=.+.. +
T Consensus 623 ---~~~P~~~~~-~A~ipa-lll~iLiFmDqqIts~-iv~rke~kL-KKg--sgyH~DLlllgil~~icsllGLPw~~~a 693 (876)
T KOG1172|consen 623 ---GKNPWWYVF-AALIPA-LLLTILIFMDQQITAV-IVNRKENKL-KKG--SGYHLDLLLLGILTLICSLLGLPWSNAA 693 (876)
T ss_pred ---CCCCHHHHH-HHHHHH-HHHHHHHHhcchHHHH-HhhcccccC-CCC--cchhHHHHHHHHHHHHHHhcCCCccccc
Confidence 122333322 133333 3334445667543332 222211 00 111 22344578899999999999998754 8
Q ss_pred hhhhhhhhhc-----------------Ccc-cchHHHHHHHHHHHHHhHHHHHhhcChhhHHHHHHHHHHHHHHH
Q 039363 383 YVESSAGIRE-----------------GGR-TGLTAVIVGLYFFISLFFTPLLTSVPPWAVGPSLVMVGVMMMKV 439 (521)
Q Consensus 383 ~~~Sa~~v~~-----------------Gar-Tgla~v~~g~~~ll~lfl~pli~~IP~~al~~aLI~vG~~m~~~ 439 (521)
..||...+++ |.| .|+++++.++++.++.++.|++..||++++-|.-.+.|+.-+.+
T Consensus 694 ~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvgls~~~~pvL~~IP~~VL~GvFlYMgv~SL~G 768 (876)
T KOG1172|consen 694 TVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVGLSVLLLPVLKLIPMPVLYGVFLYMGVSSLPG 768 (876)
T ss_pred cccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhhccCCc
Confidence 8999887763 122 57889999999998788999999999999999977777765543
No 20
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=96.94 E-value=0.0004 Score=75.91 Aligned_cols=327 Identities=18% Similarity=0.227 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcc-CCccchhHHHH---HHHHhhhCCCCchH-HHHHHHHHHHHHHHHHHHHhhhHH
Q 039363 95 LIVATVLSAMIGSFAMGILANLPLGL-APGMGANAYLA---YNLVGFHGSGSISY-QTAMAVVLVEGCAFLAISAFGLRA 169 (521)
Q Consensus 95 ~i~at~l~a~igtll~g~~a~~P~~~-~p~~G~~a~~~---~~vv~~~g~~~~~~-~~al~a~~l~Gli~lllg~~~l~g 169 (521)
-..=+++++++++++++++++-|+.+ ++. |...++- |.+....+ ++| +.-....+..+++.++++.+.. .
T Consensus 66 gv~e~l~~~~i~Gi~f~lf~gQPL~Ilg~T-gP~~vf~~~l~~~~~~~~---~~fl~~~~wig~w~~~~~~~~~~~~~-s 140 (510)
T PF00955_consen 66 GVMEVLLSTAICGIIFSLFSGQPLTILGST-GPVLVFEKILYKFCKSYG---LDFLPFRAWIGIWTAIFLLVLAAFNA-S 140 (510)
T ss_dssp -HHHHHHHHHHHHHHHHHCC------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccc-cccccccccccccccccc---cccccccccccccccccccccccccc-c
Confidence 34556789999999999999999854 432 2222221 22232222 333 4456677889999999999998 8
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCC--chhhHhhhcC----C----------------CCCCc--
Q 039363 170 QLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDP--STLLTITACA----D----------------NDPVT-- 225 (521)
Q Consensus 170 ~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~--~~~~~~g~~~----~----------------~~~~~-- 225 (521)
+++|++.+..--.|..=|+++.+.-+++.. ..+-...+ ........|. . ..+..
T Consensus 141 ~lv~~~TRfTeEiF~~lIs~iFi~ea~~~l--~~~~~~~p~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (510)
T PF00955_consen 141 FLVRYITRFTEEIFALLISIIFIYEAIKKL--VKIFKKYPLNSDYVTQYSCQCTPPENSNNSTLNPWTNLNNGSINWSNL 218 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999888888888887777666554 11111000 0000000000 0 00000
Q ss_pred --------------ccccCCCCChhH-----HHHHHHHHHHHHHHH-hhc-------cc-----chhHHHHHHHHHHHHH
Q 039363 226 --------------GACIGGKMRSPT-----FWLGLAGFLITCYGL-MKE-------IK-----GSMIYGILFVTLISWI 273 (521)
Q Consensus 226 --------------~~~~~~~~~~p~-----~~l~~~~l~l~~~l~-~~~-------ip-----~aiLigIivgtvia~~ 273 (521)
..|.......|. +.+++.++.+...+. .|+ ++ -++.++|++.+.+.+.
T Consensus 219 ~~~~c~~~~g~~~g~~c~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~ 298 (510)
T PF00955_consen 219 SNSECENINGELVGTSCDDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVDYL 298 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHHHH
Confidence 001000011121 222222222222221 111 11 2567888888888877
Q ss_pred hcCcccccCCCCCCCcccccc--ccccccCccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 039363 274 RGTAVTYFPHSPQGDANYNYF--QKIVDFHKIQSTAGVISFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVNE 351 (521)
Q Consensus 274 lg~~v~~~~~~~~g~~~~~~~--~~~~~lP~~~~~~~~~d~~~~~~~~~~~~~~~~~lv~~~etigt~~ala~~~g~~d~ 351 (521)
.+.++..+. .|.+.. ++.. ..|+--| ++..++.... .++.++ +.+.+.-++|.--+.. ++++.+ ++
T Consensus 299 ~~~~~~kL~-vp~~f~-pt~~~~r~W~v~p-----~~~~p~w~~~-aA~~pa-lll~iL~F~DqnIts~-ivn~~e--~k 366 (510)
T PF00955_consen 299 FGVDTPKLN-VPSSFK-PTSPGKRGWFVNP-----FGSLPWWAIF-AAIIPA-LLLTILFFMDQNITSL-IVNRPE--NK 366 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcccccccC-CCCCCC-CCCCCCCCeecCc-----ccCCCHHHHH-HHHHHH-HHHHHHHHHHHhHhHH-HhCChh--hc
Confidence 663221111 111111 0000 1222111 1111111111 112222 2223333455322211 111110 01
Q ss_pred CCCcccCCceeeecchhhhhhhccCCCccc-hhhhhhhhhhc----------Ccc--------cchHHHHHHHHHHHHHh
Q 039363 352 QGKFEGEYIAYMVDASSTIVGSALGVSPIA-TYVESSAGIRE----------GGR--------TGLTAVIVGLYFFISLF 412 (521)
Q Consensus 352 ~~~~~~~~~~l~adGlanii~~lfG~~P~t-s~~~Sa~~v~~----------Gar--------Tgla~v~~g~~~ll~lf 412 (521)
-.+...-.-++.-.|+-|.++|++|-.+.. +..||..++++ |-+ +|++++..++++.++++
T Consensus 367 LkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe~~~i~~V~EqRvT~l~~~~Ligls~~ 446 (510)
T PF00955_consen 367 LKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGEKPKIVGVREQRVTGLLVHLLIGLSLF 446 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCCCCeeCeEEEecccHHHHHHHHHHHHH
Confidence 011123345678899999999999987654 78888777652 222 56778888887777788
Q ss_pred HHHHHhhcChhhHHHHHHHHHHHHHHHh
Q 039363 413 FTPLLTSVPPWAVGPSLVMVGVMMMKVV 440 (521)
Q Consensus 413 l~pli~~IP~~al~~aLI~vG~~m~~~i 440 (521)
+.|+++.||++++.|+..+.|+.-+.+.
T Consensus 447 l~pvL~~IP~~VL~GvFlymG~~sL~gn 474 (510)
T PF00955_consen 447 LLPVLKLIPMPVLYGVFLYMGVTSLSGN 474 (510)
T ss_dssp ----------------------------
T ss_pred HHHHHHHhhHHHHHHHHHhheeeeecCc
Confidence 9999999999999999888888766553
No 21
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=94.86 E-value=0.059 Score=44.86 Aligned_cols=29 Identities=28% Similarity=0.205 Sum_probs=24.3
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhHhhhc---CCC
Q 039363 24 KSCFTKELRAGTATFLTMAYIITVNATIIADS---GGT 58 (521)
Q Consensus 24 ~~~~~~ei~aGl~~~lam~y~~~v~P~ila~a---G~~ 58 (521)
++++++|+++|++..+.+ .|+.++++ |+|
T Consensus 13 k~~~~~D~~aGltva~~~------iPq~~a~A~lAg~p 44 (84)
T PF13792_consen 13 KSNLRGDLLAGLTVALVA------IPQGMAYALLAGVP 44 (84)
T ss_pred HHHHHHHHHHHHHHHHHH------HHHHHHHHHHcCCC
Confidence 368999999999998754 69999996 765
No 22
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=93.40 E-value=3.8 Score=43.09 Aligned_cols=249 Identities=17% Similarity=0.148 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhhccccceecCCCchhhHhhhcCCCCCCcccc
Q 039363 149 MAVVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQLHQGVGLVGPDPSTLLTITACADNDPVTGAC 228 (521)
Q Consensus 149 l~a~~l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~~glGi~~~~~~~~~~~g~~~~~~~~~~~~ 228 (521)
+...++.|++-++++.+|--.++++.-++-|..|.+.=.|..=...|+++. ..+..
T Consensus 145 Lalgilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl-------------~~wa~----------- 200 (492)
T PF11840_consen 145 LALGILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKL-------------FAWAN----------- 200 (492)
T ss_pred HHHHHHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHH-------------HHHHh-----------
Confidence 556778899999999998878999999999998877666655555666553 11110
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHH--hhcccchhHHHHHHHHHHHHHhcCcccccCCCCCCCccccccccccccCccccc
Q 039363 229 IGGKMRSPTFWLGLAGFLITCYGL--MKEIKGSMIYGILFVTLISWIRGTAVTYFPHSPQGDANYNYFQKIVDFHKIQST 306 (521)
Q Consensus 229 ~~~~~~~p~~~l~~~~l~l~~~l~--~~~ip~aiLigIivgtvia~~lg~~v~~~~~~~~g~~~~~~~~~~~~lP~~~~~ 306 (521)
.-+..+-.+.+-+.++++..++. .||.- ++=++-+++-++++.+|.. .++.+. -|+|.+.. .-|+.= ..
T Consensus 201 -~~~~~~i~fvvi~~tiv~Ya~L~k~~KrWL-aIPl~~~~a~~~a~~lGa~-f~f~t~-pglp~lnP-~YWWge----~t 271 (492)
T PF11840_consen 201 -GFDMGYIAFVVIIVTIVLYAYLAKIEKRWL-AIPLCSILAGVLAFALGAP-FEFTTE-PGLPNLNP-MYWWGE----ET 271 (492)
T ss_pred -ccCccHHHHHHHHHHHHHHHHHHHhccchh-hhhHHHHHHHHHHHHcCCC-ceeecC-CCCCCCCC-cccccC----Cc
Confidence 00223322333333343333442 23311 2223444455566677642 223321 23332210 001100 00
Q ss_pred cccc---cccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-CCCCcccCCceeeecchhhhhhhccCCCccch
Q 039363 307 AGVI---SFTNFNHSEVWVALATLLYVDVLATTGTLYTMAEIGGFVN-EQGKFEGEYIAYMVDASSTIVGSALGVSPIAT 382 (521)
Q Consensus 307 ~~~~---d~~~~~~~~~~~~~~~~~lv~~~etigt~~ala~~~g~~d-~~~~~~~~~~~l~adGlanii~~lfG~~P~ts 382 (521)
..++ +++++. ..+|.++.....=.-|..|+-. .-+. ++-+ .|+..-|.+..+....+=+++|+.+||--.++
T Consensus 272 Gw~LglP~~~hfi--av~PFAiLAVaMWSpDflghrv-Fqel-nypk~~~kvlMnvDDTm~~~siRQ~vGs~lGGgN~~S 347 (492)
T PF11840_consen 272 GWQLGLPTLEHFI--AVLPFAILAVAMWSPDFLGHRV-FQEL-NYPKETKKVLMNVDDTMTMCSIRQIVGSILGGGNIAS 347 (492)
T ss_pred ccccCCCcHHHHH--HhccHHHHHHHHhCchHHHHHH-HHHh-cCchhhcceeecccchhHHHHHHHHHhhcccCCcccc
Confidence 0011 122221 1112111111111234444322 2111 1111 12334588889999999999999999986653
Q ss_pred hhhhhhhhhcCcccch--HHHHHHHHHHHH-HhHHHH-HhhcChhhHHHHHHHHHHHH
Q 039363 383 YVESSAGIREGGRTGL--TAVIVGLYFFIS-LFFTPL-LTSVPPWAVGPSLVMVGVMM 436 (521)
Q Consensus 383 ~~~Sa~~v~~GarTgl--a~v~~g~~~ll~-lfl~pl-i~~IP~~al~~aLI~vG~~m 436 (521)
--+|=.--++-+|-++ .++.+|.+..++ +.=.|. +..-| +++--+| ++|+.+
T Consensus 348 sWgTymIPaaIaKRPIpggAiLtg~~Ci~~av~GyPMdlavw~-Pvl~vAL-lvGVfl 403 (492)
T PF11840_consen 348 SWGTYMIPAAIAKRPIPGGAILTGLLCIVAAVWGYPMDLAVWP-PVLRVAL-LVGVFL 403 (492)
T ss_pred cchhhhhhHHHhcCCCCchHHHHHHHHHHHHHhcCcchhhhcc-cHHHHHH-HHHHHH
Confidence 3333222223345544 457777776665 433342 22223 2444443 345543
No 23
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=58.80 E-value=11 Score=40.87 Aligned_cols=82 Identities=26% Similarity=0.493 Sum_probs=49.4
Q ss_pred HHHHHHHH-HhHH-HHHhhcChhhHHHHHHHHHHHHHH-Hhhh----------hccccchhHHHHHHHHHHHHHH-----
Q 039363 403 VGLYFFIS-LFFT-PLLTSVPPWAVGPSLVMVGVMMMK-VVKD----------IDWGSIKHAVPAFVTILLMPLT----- 464 (521)
Q Consensus 403 ~g~~~ll~-lfl~-pli~~IP~~al~~aLI~vG~~m~~-~i~~----------i~~~~~~~~~~a~vtii~~~lt----- 464 (521)
+|++..+. .++. -+.+.+|..++|+++.++|..+.. .++. -|+.+..+...+++|++.+.+.
T Consensus 115 ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~ 194 (451)
T COG2233 115 AGLVYFLISPIVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDFGSLENLGLALVTLLIILLINRFGK 194 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCCcccCchhHHHHHHHHHHHHHHHHHHhh
Confidence 33333333 3344 567799999999998888887763 2322 1233444554454444433322
Q ss_pred -----HHHHHHHHHHHHHHHHHHHH
Q 039363 465 -----YSIAYGIIGGIGLYIALSLY 484 (521)
Q Consensus 465 -----~~i~~GI~~G~i~~i~l~l~ 484 (521)
+.+..|+..|.+++..+...
T Consensus 195 g~~~~i~ILiGlv~G~~la~~~G~v 219 (451)
T COG2233 195 GFLRRIPILIGLVVGYLLALFMGMV 219 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 35778888888888777633
No 24
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=46.99 E-value=2e+02 Score=30.70 Aligned_cols=84 Identities=24% Similarity=0.512 Sum_probs=46.8
Q ss_pred HHHHHHHHHHH-HhHHHHHhhcChhhHHHHHHHHHHHHHH-Hhhhh-------ccccchhHHHHHHHHHHHHHH------
Q 039363 400 AVIVGLYFFIS-LFFTPLLTSVPPWAVGPSLVMVGVMMMK-VVKDI-------DWGSIKHAVPAFVTILLMPLT------ 464 (521)
Q Consensus 400 ~v~~g~~~ll~-lfl~pli~~IP~~al~~aLI~vG~~m~~-~i~~i-------~~~~~~~~~~a~vtii~~~lt------ 464 (521)
.++.|++.++. ..+.-+.+.+|..+.+..+.++|..... .++.. ++.+..+....+++++.+.+.
T Consensus 89 ~~v~Gii~illg~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~~~~~~~l~l~~l~~~il~~~~~~~ 168 (406)
T TIGR03173 89 VIVAGLFVILLAPFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFGSPQNLGLALLTLVIILLLNRFGKG 168 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcccccchHHHHHHHHHHHHHHHHHHHhhh
Confidence 34455555554 4445688999998877777778876653 33322 223333333333333322221
Q ss_pred ----HHHHHHHHHHHHHHHHHHH
Q 039363 465 ----YSIAYGIIGGIGLYIALSL 483 (521)
Q Consensus 465 ----~~i~~GI~~G~i~~i~l~l 483 (521)
+++..|+.+|.+++..+..
T Consensus 169 ~~~~~aiLi~ivvg~iva~~~g~ 191 (406)
T TIGR03173 169 FLRSIAVLLGLVVGTIVAAALGM 191 (406)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcC
Confidence 2567777777777776543
No 25
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=46.51 E-value=1.7e+02 Score=31.44 Aligned_cols=83 Identities=29% Similarity=0.530 Sum_probs=47.6
Q ss_pred HHHHHHHHHH-HhHHH-----HHhhcChhhHHHHHHHHHHHHH-HHhhhh----------ccccchhHHHHHHHHHHHHH
Q 039363 401 VIVGLYFFIS-LFFTP-----LLTSVPPWAVGPSLVMVGVMMM-KVVKDI----------DWGSIKHAVPAFVTILLMPL 463 (521)
Q Consensus 401 v~~g~~~ll~-lfl~p-----li~~IP~~al~~aLI~vG~~m~-~~i~~i----------~~~~~~~~~~a~vtii~~~l 463 (521)
++.|+++.+. .++.. +.+.+|..+.++++..+|+.+. .+++.. +|.+..+....+++++.+.+
T Consensus 98 i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~~~~~~~~~~~vg~~~l~~~vl 177 (415)
T TIGR00801 98 IATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSSATYGSLENLGVAFVVLALIIL 177 (415)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHHHHHHH
Confidence 4455555543 33233 3789999999999888888776 344432 12223333333344433221
Q ss_pred H----------HHHHHHHHHHHHHHHHHHH
Q 039363 464 T----------YSIAYGIIGGIGLYIALSL 483 (521)
Q Consensus 464 t----------~~i~~GI~~G~i~~i~l~l 483 (521)
. +++..|+.+|.+++..+..
T Consensus 178 ~~~~~~g~~~~~aiLigiv~g~i~a~~lg~ 207 (415)
T TIGR00801 178 LNRFGKGFLKSISILIGILVGYILALFMGI 207 (415)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 3577778888888776653
No 26
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=44.39 E-value=2e+02 Score=32.33 Aligned_cols=106 Identities=13% Similarity=0.106 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCCCcccCCceeeecchhhhhhhccCCCccchhhh----hhhhhhcCc---ccc
Q 039363 325 ATLLYVDVLATTGTLYTMAEIGGFVNEQGKFEGEYIAYMVDASSTIVGSALGVSPIATYVE----SSAGIREGG---RTG 397 (521)
Q Consensus 325 ~~~~lv~~~etigt~~ala~~~g~~d~~~~~~~~~~~l~adGlanii~~lfG~~P~ts~~~----Sa~~v~~Ga---rTg 397 (521)
+++.++.+-|+++-.. .+| + +...+|.+-=++.++.++||+.|.-.... +..-.+.-+ .++
T Consensus 29 ltva~valP~ama~a~----~aG-v-------~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~~~g 96 (554)
T COG0659 29 LTVAAVALPLAMAFAI----AAG-V-------PPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLVETG 96 (554)
T ss_pred HHHHHHHhHHHHHHHH----HcC-C-------CHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHHHHH
Confidence 4555556667665433 233 1 22245666678889999999998431111 111111112 455
Q ss_pred hH-----HHHHHHHHHHH-Hh-HHHHHhhcChhhHHHHHHHHHHHHH-HHhhh
Q 039363 398 LT-----AVIVGLYFFIS-LF-FTPLLTSVPPWAVGPSLVMVGVMMM-KVVKD 442 (521)
Q Consensus 398 la-----~v~~g~~~ll~-lf-l~pli~~IP~~al~~aLI~vG~~m~-~~i~~ 442 (521)
+. ++.+|++.++. ++ +.-++++||.+++-|-+-=+|+.++ .++++
T Consensus 97 ~~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~ 149 (554)
T COG0659 97 LALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPV 149 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 34455555554 32 6779999999998888766666654 45554
No 27
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=42.25 E-value=5.4e+02 Score=28.84 Aligned_cols=36 Identities=22% Similarity=0.138 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhcCChhHHHHHHHHHH
Q 039363 151 VVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIG 188 (521)
Q Consensus 151 a~~l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~gIG 188 (521)
+.+++|++.++..++ + ..+.+++|.++..+++.-++
T Consensus 335 a~i~~~~~~l~~~l~-~-~~~l~~iP~~~la~ili~~~ 370 (563)
T TIGR00815 335 SGVVTAIVVLLVLLV-L-TPLFYYIPQAALAAIIISAV 370 (563)
T ss_pred HHHHHHHHHHHHHHH-H-HHHHHhChHHHHHHHHHHHH
Confidence 345555555555443 2 66899999999765544333
No 28
>PRK10720 uracil transporter; Provisional
Probab=40.65 E-value=89 Score=33.86 Aligned_cols=47 Identities=19% Similarity=0.116 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhhc
Q 039363 153 LVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQLH 199 (521)
Q Consensus 153 ~l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~ 199 (521)
..+|++.++++++.-.+.+...+|++|..|.....=-.|...|++..
T Consensus 306 ~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~Gi~~l 352 (428)
T PRK10720 306 GGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGASGIRVL 352 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45888888998865449999999999999887765555666666653
No 29
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=36.96 E-value=2.4e+02 Score=29.87 Aligned_cols=74 Identities=27% Similarity=0.393 Sum_probs=44.0
Q ss_pred HHHhhcChhhHHHHHHHHHHHHH-HHhhhhc--c--------ccchhHHHHHHHHHHHHHH----------HHHHHHHHH
Q 039363 415 PLLTSVPPWAVGPSLVMVGVMMM-KVVKDID--W--------GSIKHAVPAFVTILLMPLT----------YSIAYGIIG 473 (521)
Q Consensus 415 pli~~IP~~al~~aLI~vG~~m~-~~i~~i~--~--------~~~~~~~~a~vtii~~~lt----------~~i~~GI~~ 473 (521)
-+.+.+|..+.++++...|+.+. .+++... | .+..+....+.+....... +++..|+.+
T Consensus 114 ~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ailigi~~ 193 (389)
T PF00860_consen 114 RLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLVGDGKNLGLAVLTLLFILLLSLFLKGFLRKGAILIGIIA 193 (389)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B---HHHHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHH
T ss_pred HHHHHhChhheEeeEeeehhhhhhhHhhccccccccccccccccccccccccccchhhhhhhhhhhhhcccccchhhhhh
Confidence 57899999999999999999876 3444331 2 1112223333333222211 568899999
Q ss_pred HHHHHHHHHHHhhhh
Q 039363 474 GIGLYIALSLYDCVV 488 (521)
Q Consensus 474 G~i~~i~l~l~~~~~ 488 (521)
|.+++..+.......
T Consensus 194 g~i~~~~~g~~~~~~ 208 (389)
T PF00860_consen 194 GWIVAAILGVVDFSP 208 (389)
T ss_dssp HHHHHHHHHHTTSSH
T ss_pred hhhhhhcccccccCc
Confidence 999999988544443
No 30
>COG4392 Predicted membrane protein [Function unknown]
Probab=31.69 E-value=2e+02 Score=25.06 Aligned_cols=67 Identities=24% Similarity=0.326 Sum_probs=40.4
Q ss_pred HHhhcChhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039363 416 LLTSVPPWAVGPSLVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSLY 484 (521)
Q Consensus 416 li~~IP~~al~~aLI~vG~~m~~~i~~i~~~~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~~i~l~l~ 484 (521)
.++++|.++ -.|++.=.+.+-.+=.+..|+.+ +.+...+++++.-+|=|+...+..|+..+.+++++
T Consensus 40 ~L~fvP~a~-ltAL~~p~vl~~~~g~~~s~~~p-~llA~lvav~la~lTrnll~~il~Gm~~~~~lr~~ 106 (107)
T COG4392 40 FLSFVPVAI-LTALIAPDVLMPHGGLDPSWNNP-YLLAGLVAVALAILTRNLLATILVGMASFALLRLF 106 (107)
T ss_pred HHhhccHHH-HHHHHhhhHhccCCCcchhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888754 34444333333321111223322 33445566766678889999999999999888765
No 31
>PRK11660 putative transporter; Provisional
Probab=30.09 E-value=1.6e+02 Score=33.18 Aligned_cols=118 Identities=15% Similarity=0.188 Sum_probs=70.4
Q ss_pred eecchhhhhhhccCCCccc-hhhhhhhhhhcCcccchHHHHHHHHHHH-H--HhHHHHHhhcChhhHHHHHHHHHHH-HH
Q 039363 363 MVDASSTIVGSALGVSPIA-TYVESSAGIREGGRTGLTAVIVGLYFFI-S--LFFTPLLTSVPPWAVGPSLVMVGVM-MM 437 (521)
Q Consensus 363 ~adGlanii~~lfG~~P~t-s~~~Sa~~v~~GarTgla~v~~g~~~ll-~--lfl~pli~~IP~~al~~aLI~vG~~-m~ 437 (521)
+++=++.+.+++-++--.+ +-.....+.+++--+=+++++..+.+++ . +-..|.-..=+.-...+.- ++-.. ..
T Consensus 322 ~aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~~~~~-m~~~~~~~ 400 (568)
T PRK11660 322 LGNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWN-MSEAHKVV 400 (568)
T ss_pred HHHHHHHHhCcccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH-hhhHHHHH
Confidence 5677889999998887644 4333333444333333345444444332 2 3344533322222233332 22222 33
Q ss_pred HHhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039363 438 KVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIAL 481 (521)
Q Consensus 438 ~~i~~i~~~~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~~i~l 481 (521)
.-.|+.+++|....+.+++++++..+..++..|+.+.++.++.-
T Consensus 401 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~Gi~~s~~~~~~~ 444 (568)
T PRK11660 401 DLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRR 444 (568)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 34566788888889888887778889999999999999886643
No 32
>PF07178 TraL: TraL protein; InterPro: IPR009838 This entry represents bacterial TraL proteins. TraL is a predicted peripheral membrane protein involved in bacterial sex pilus assembly []. TraL is part of the type IV secretion system for conjugative plasmid transfer []. The exact function of TraL is unknown.; GO: 0000746 conjugation, 0019867 outer membrane
Probab=28.86 E-value=1.6e+02 Score=24.80 Aligned_cols=47 Identities=19% Similarity=0.236 Sum_probs=34.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 039363 447 SIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSLYDCVVGLVRC 493 (521)
Q Consensus 447 ~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~~i~l~l~~~~~~~~~~ 493 (521)
+.+|.+++++.++...+......|+++|++++...+-.+..++..-.
T Consensus 19 ~~De~~~~~~~~~~gi~~~~~~~g~i~g~~~~~~~~k~K~~~~~g~l 65 (95)
T PF07178_consen 19 PMDEFIPALILFVIGILSGHFLIGLILGIVLWWGYRKFKKGRGRGFL 65 (95)
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHccCCccHH
Confidence 56677777666655555556788999999888888887777765443
No 33
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication. The model describes a hydrophobic sequence region that is duplicated to form the AbrB protein of Escherichia coli (not to be confused with a Bacillus subtilis protein with the same gene symbol). In some species, notably the Cyanobacteria and Thermus thermophilus, proteins consist of a single copy rather than two copies. The member from Pseudomonas putida, PP_1415, was suggested to be an ammonia monooxygenase characteristic of heterotrophic nitrifiers, based on an experimental indication of such activity in the organism and a glimmer of local sequence similarity between parts of P. putida protein and an instance of the AmoA protein from Nitrosomonas europaea (PubMed:9732537); we do not believe the sequence similarity to be meaningful. The member from E. coli (b0715, ybgN) appears to be the largely uncharacterized AbrB (aidB regulator) protein of E. coli cited in Volkert, et al. (PubMed 8002588), although we did not manage to tra
Probab=27.75 E-value=2.1e+02 Score=26.30 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=54.3
Q ss_pred hcChhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhh
Q 039363 419 SVPPWAVGPSLVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSLYDCVVGLVRCFLKLR 498 (521)
Q Consensus 419 ~IP~~al~~aLI~vG~~m~~~i~~i~~~~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~~i~l~l~~~~~~~~~~~~~~~ 498 (521)
..|......+.++.|...-..+++.++++..+..+..+.. ...=+..++..+.++..+...+...+.++-.|
T Consensus 43 ~~P~~~~~~~qviiG~~iG~~f~~~~l~~~~~~~~~~l~~--------~~~~l~~~~~~~~~l~~~~~~~~~ta~La~~P 114 (156)
T TIGR03082 43 TLPPWLLALAQVVIGILIGSRFTREVLAELKRLWPAALLS--------TVLLLALSALLAWLLARLTGVDPLTAFLATSP 114 (156)
T ss_pred CCCHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHCCCHHHHHHHhCC
Confidence 4677777777777888777666665555544444332211 11123334455566667777888999999999
Q ss_pred hhHhhhhhhhhcccCCCCC
Q 039363 499 RMVAKEQNQVSAAAGVDPS 517 (521)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~ 517 (521)
|-.. |-.-.+.+-|.||.
T Consensus 115 GGl~-~m~~~A~~~gad~~ 132 (156)
T TIGR03082 115 GGAS-EMAALAAELGADVA 132 (156)
T ss_pred chHH-HHHHHHHHhCCCHH
Confidence 7654 33334445566664
No 34
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=27.29 E-value=1.5e+02 Score=32.35 Aligned_cols=49 Identities=18% Similarity=0.075 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhhc
Q 039363 151 VVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQLH 199 (521)
Q Consensus 151 a~~l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~~ 199 (521)
....+|++.+++|++.-.+.+...+|.+|..|...-.=-.|+..|++..
T Consensus 319 v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l 367 (433)
T PRK11412 319 SFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFS 367 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888899999975559999999999999887666556666777654
No 35
>COG3275 LytS Putative regulator of cell autolysis [Signal transduction mechanisms]
Probab=24.86 E-value=9.9e+02 Score=26.61 Aligned_cols=128 Identities=16% Similarity=0.120 Sum_probs=70.7
Q ss_pred hhhhhhhccCCCccchhhhhhhhhh---cCcccchHHHHHHHHHHHH-Hh---HHHHHhhcChhhHHHHHHHHHHHHHHH
Q 039363 367 SSTIVGSALGVSPIATYVESSAGIR---EGGRTGLTAVIVGLYFFIS-LF---FTPLLTSVPPWAVGPSLVMVGVMMMKV 439 (521)
Q Consensus 367 lanii~~lfG~~P~ts~~~Sa~~v~---~GarTgla~v~~g~~~ll~-lf---l~pli~~IP~~al~~aLI~vG~~m~~~ 439 (521)
++-+.||++||+-++.+..-.++.. .||.|-++..+..++--+. -. ..+-=.-.|.+..++. +-..+-|++-
T Consensus 72 igv~~gGllgGP~Vg~~vGl~~GlhR~~mGg~ta~~c~iSti~~G~l~g~~~~~~~r~~R~~~p~~~~~-v~~~~E~lqM 150 (557)
T COG3275 72 IGVVMGGLLGGPVVGIIVGLTAGLHRYSMGGMTALSCAISTILEGLLGGLVHLYLIRRGRWDSPIVAAL-VGIVAEMLQM 150 (557)
T ss_pred HHHHhcccccCChhhhhhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhccCCCCchHHHH-HHHHHHHHHH
Confidence 5668899999988876665555552 7888887655544443332 11 1122245565543333 2222333332
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhh
Q 039363 440 VKDIDWGSIKHAVPAFVTILLMPLTYSIAYGIIGGIGLYIALSLYDCVVGLVRCFLKL 497 (521)
Q Consensus 440 i~~i~~~~~~~~~~a~vtii~~~lt~~i~~GI~~G~i~~i~l~l~~~~~~~~~~~~~~ 497 (521)
+--+-|..+.+...-++.-+.+|.. +.+.+..++...++....+..+...++..+.
T Consensus 151 ~iIL~~a~~~~~av~lVs~i~iPMi--l~Nsvgaa~fm~i~~~~~~~~E~~~a~~a~~ 206 (557)
T COG3275 151 LIILVIARPFADAVDLVSNIAIPMI--LGNSVGAALFMRILLDRRAKFEKYAAVQAKL 206 (557)
T ss_pred HHHhhccCcHHHHHHHHhhccchhH--hhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333455544444455666666644 5566777777777766666655555555443
No 36
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=24.69 E-value=2.3e+02 Score=30.54 Aligned_cols=84 Identities=15% Similarity=0.222 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccCCccchhHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHh-hhHHHHHhcC
Q 039363 97 VATVLSAMIGSFAMGILANLPLGLAPGMGANAYLAYNLVGFHGSGSISYQTAMAVVLVEGCAFLAISAF-GLRAQLARLI 175 (521)
Q Consensus 97 ~at~l~a~igtll~g~~a~~P~~~~p~~G~~a~~~~~vv~~~g~~~~~~~~al~a~~l~Gli~lllg~~-~l~g~l~~~i 175 (521)
...+...++++++.+.+++.++-++. . +.++..++. ...+..-=.++.+..|++++++|++ +....+...+
T Consensus 257 ~~~~~~tGl~sll~ApfGg~~~nlaa------i-taAic~G~~-ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~ 328 (395)
T TIGR00843 257 KPIIAAAGLAALFAAFAGGISIGIAA------I-TAAICMGKD-AHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAAL 328 (395)
T ss_pred hHHHHHHHHHHHHHhccCCchhhhhH------H-hHHHhcCcc-cccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 44456677777777766666554332 1 122322221 1111222346788999999999998 6667888999
Q ss_pred ChhHHHHHHHHHHH
Q 039363 176 PQPVRLACAAGIGL 189 (521)
Q Consensus 176 P~~V~~G~~~gIGl 189 (521)
|+.++.. .+|+++
T Consensus 329 P~~li~~-laGlAl 341 (395)
T TIGR00843 329 PKELIAA-LAGLAL 341 (395)
T ss_pred CHHHHHH-HHHHHH
Confidence 9999654 455554
No 37
>PF07613 DUF1576: Protein of unknown function (DUF1576); InterPro: IPR011470 This small family is found in several undescribed proteins. The alignment is distinguished by the frequent occurrence of conserved glycine and aromatic residues.
Probab=23.95 E-value=4.8e+02 Score=25.02 Aligned_cols=81 Identities=21% Similarity=0.302 Sum_probs=46.8
Q ss_pred ccchHHHHHHHHHHHHHh--HH-HHHhhcChhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHH--H----
Q 039363 395 RTGLTAVIVGLYFFISLF--FT-PLLTSVPPWAVGPSLVMVGVMMMKVVKDIDWGSIKHAVPAFVTILLMPLT--Y---- 465 (521)
Q Consensus 395 rTgla~v~~g~~~ll~lf--l~-pli~~IP~~al~~aLI~vG~~m~~~i~~i~~~~~~~~~~a~vtii~~~lt--~---- 465 (521)
|..+.+-+.+.++.+.-| +. -+.+.+|. +.|+..-+-+++-+.++ ..+.++....+-|+. +
T Consensus 58 ~~~lnGp~iaaiftv~GFs~FGKn~~Ni~PI--------~lGv~Lys~~~~~~~~~--~il~aLFgT~LAPi~s~~~f~~ 127 (183)
T PF07613_consen 58 KGKLNGPTIAAIFTVVGFSAFGKNIKNIWPI--------ILGVYLYSKLSKEPFSS--YILIALFGTALAPIVSEFAFGL 127 (183)
T ss_pred CCCCCcHHHHHHHHHHHHHHcCCcHHHHhHH--------HHHHHHHHHHcCCChHH--HHHHHHHHhhHHHHHHHHHHhc
Confidence 556666566666665422 22 37888875 66777666655543333 334455555555655 3
Q ss_pred -------HHHHHHHHHHHHHHHHHHHh
Q 039363 466 -------SIAYGIIGGIGLYIALSLYD 485 (521)
Q Consensus 466 -------~i~~GI~~G~i~~i~l~l~~ 485 (521)
++..|+.+|++...+..-..
T Consensus 128 ~~~~~~lG~~~Gi~~Gfi~~~la~~~~ 154 (183)
T PF07613_consen 128 GLPLPILGILIGIIAGFIHPPLASNFG 154 (183)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888887765544333
No 38
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=22.74 E-value=2e+02 Score=31.13 Aligned_cols=48 Identities=17% Similarity=0.099 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhh
Q 039363 151 VVLVEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQL 198 (521)
Q Consensus 151 a~~l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~ 198 (521)
....+|++++++++++-.+.+...+|++|..|.....=-.|...|++.
T Consensus 324 v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~ 371 (429)
T TIGR03616 324 VFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARI 371 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888887544889999999999988776555566666664
No 39
>PF15110 TMEM141: TMEM141 protein family; PDB: 2LOR_A.
Probab=21.66 E-value=1.3e+02 Score=25.59 Aligned_cols=23 Identities=4% Similarity=0.307 Sum_probs=16.4
Q ss_pred HHhhcccc----hhHHHHHHHHHHHHH
Q 039363 251 GLMKEIKG----SMIYGILFVTLISWI 273 (521)
Q Consensus 251 l~~~~ip~----aiLigIivgtvia~~ 273 (521)
+..||+|. ++|++++++++.+|.
T Consensus 48 ~iqrrlpYp~q~~~LVS~v~~sv~sY~ 74 (94)
T PF15110_consen 48 AIQRRLPYPFQWNILVSVVVASVASYQ 74 (94)
T ss_dssp HHHTTSSSSS-HHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCchhHHHHHHhhhhhhh
Confidence 35677775 577888887777775
No 40
>TIGR00210 gltS sodium--glutamate symport carrier (gltS).
Probab=21.44 E-value=2.4e+02 Score=30.40 Aligned_cols=40 Identities=20% Similarity=0.221 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhhH-HHHHh-cCChhHHHHHHHHHHHHHHH
Q 039363 154 VEGCAFLAISAFGLR-AQLAR-LIPQPVRLACAAGIGLFIAF 193 (521)
Q Consensus 154 l~Gli~lllg~~~l~-g~l~~-~iP~~V~~G~~~gIGl~I~~ 193 (521)
++++++++--+.|-| +++.| +||.+|+.|+..++.+.+..
T Consensus 11 la~~lLllG~~Lr~kv~~Lqk~~IPapViGGll~al~l~l~~ 52 (398)
T TIGR00210 11 VAILVLLLGRYLVKKIKFLKSFNIPEPVVGGVLVALALLLIY 52 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 334444444444322 55666 89999999998887766543
No 41
>PF06305 DUF1049: Protein of unknown function (DUF1049); InterPro: IPR010445 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=20.75 E-value=2.9e+02 Score=21.17 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhhHhhhhhhh
Q 039363 467 IAYGIIGGIGLYIALSLYDCVVGLVRCFLKLRRMVAKEQNQV 508 (521)
Q Consensus 467 i~~GI~~G~i~~i~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (521)
+..|+.+|.+....-. .+ +-+-..|..+.+++.|.|+
T Consensus 28 f~~G~llg~l~~~~~~----~~-~r~~~~~~~k~l~~le~e~ 64 (68)
T PF06305_consen 28 FLLGALLGWLLSLPSR----LR-LRRRIRRLRKELKKLEKEL 64 (68)
T ss_pred HHHHHHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHHH
Confidence 4556666655443332 21 2223345555555555444
No 42
>PF01616 Orbi_NS3: Orbivirus NS3; InterPro: IPR002565 This is a family of Orbivirus non structural protein of unknown function, but which may play a role in release of the virus from infected cells [].
Probab=20.49 E-value=4.8e+02 Score=25.31 Aligned_cols=47 Identities=21% Similarity=0.141 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhhHhhhhhhhhccc
Q 039363 466 SIAYGIIGGIGLYIALSLYDCVVGLVRCFLKLRRMVAKEQNQVSAAA 512 (521)
Q Consensus 466 ~i~~GI~~G~i~~i~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (521)
+...+++-...+..++...|+.+.+..-+-++++-+.|.|--++++.
T Consensus 131 ~~~~~~inL~~T~~~~~~~r~~~~l~~~i~r~kkeI~KR~sYn~aar 177 (195)
T PF01616_consen 131 SITLHVINLIATTAMMFCARIERSLQEQIKRLKKEIMKRQSYNDAAR 177 (195)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666777888999999999999999999999998777653
No 43
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=20.24 E-value=6.5e+02 Score=27.91 Aligned_cols=45 Identities=18% Similarity=0.191 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhhHHHHHhcCChhHHHHHHHHHHHHHHHHhhhh
Q 039363 154 VEGCAFLAISAFGLRAQLARLIPQPVRLACAAGIGLFIAFVGLQL 198 (521)
Q Consensus 154 l~Gli~lllg~~~l~g~l~~~iP~~V~~G~~~gIGl~I~~igL~~ 198 (521)
++|.+++++|+++=++.+...||.++..|..+-.=-.+.-.||.+
T Consensus 353 ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSn 397 (510)
T KOG1292|consen 353 IAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSN 397 (510)
T ss_pred hhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhh
Confidence 467778888886545999999999999877653322333344444
Done!