BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039371
(346 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 66
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 67 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 244
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 304
Query: 294 SI 295
+
Sbjct: 305 RL 306
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 197 bits (501), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Query: 294 SI 295
+
Sbjct: 298 RL 299
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 197 bits (501), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 179/302 (59%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL++
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Query: 294 SI 295
+
Sbjct: 298 RL 299
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 179/303 (59%), Gaps = 11/303 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 63
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 64 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 241
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 301
Query: 294 SID 296
++
Sbjct: 302 RLE 304
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Query: 294 SI 295
+
Sbjct: 298 RL 299
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 58
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 236
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Query: 294 SI 295
+
Sbjct: 297 RL 298
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Query: 294 SI 295
+
Sbjct: 298 RL 299
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 60
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 179
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 238
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Query: 294 SI 295
+
Sbjct: 299 RL 300
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 66
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 67 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 244
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 304
Query: 294 SI 295
+
Sbjct: 305 RL 306
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 178/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 62
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++D +L + M ++ +K++ FQ+LQGL +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 240
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Query: 294 SI 295
+
Sbjct: 301 RL 302
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 60
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 238
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Query: 294 SI 295
+
Sbjct: 299 RL 300
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 58
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L M ++ +K++ FQ+LQGL +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 236
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Query: 294 SI 295
+
Sbjct: 297 RL 298
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 176/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 62
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L M ++ +K++ FQ+LQGL +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 240
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Query: 294 SI 295
+
Sbjct: 301 RL 302
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 62
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 240
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 175/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 61
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L M ++ +K++ FQ+LQGL +
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 239
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 177/301 (58%), Gaps = 11/301 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKIN 58
E + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++N
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKELN 59
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 -HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSMS 294
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
Query: 295 I 295
+
Sbjct: 298 L 298
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Query: 294 SI 295
+
Sbjct: 298 RL 299
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 58
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 236
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Query: 294 SI 295
+
Sbjct: 297 RL 298
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+ K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Query: 294 SI 295
+
Sbjct: 298 RL 299
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+ K R+ + E + ++E+ L+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX--KIRLDTETEGVPSTAIREISLLKEL 58
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA YT + TL YRAPE+LL
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 236
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
Query: 294 SI 295
+
Sbjct: 297 RL 298
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 60
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 238
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
Query: 294 SI 295
+
Sbjct: 299 RL 300
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 61
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 239
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
Query: 294 SI 295
+
Sbjct: 300 RL 301
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 63
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 64 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 182
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 241
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 301
Query: 294 SI 295
+
Sbjct: 302 RL 303
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 177/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 62
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 240
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Query: 294 SI 295
+
Sbjct: 301 RL 302
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 194 bits (492), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 60
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 238
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 61
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 239
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 58
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 59 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 236
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 60
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 61 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 238
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 176/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
Query: 294 SI 295
+
Sbjct: 298 RL 299
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 62
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 240
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 11/300 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 61
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 62 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 239
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 299
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 176/302 (58%), Gaps = 11/302 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 62
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L M ++ +K++ FQ+LQGL +
Sbjct: 63 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 240
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQ-VPSM 293
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ + VP +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 300
Query: 294 SI 295
+
Sbjct: 301 RL 302
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 172/291 (59%), Gaps = 10/291 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
ME + +++IGEG++G V++A K +GE VA+K K R+ + E + ++E+ L+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK--KIRLDTETEGVPSTAIREISLLKEL 59
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
N HPNIVKL ++ +LY VFE++ +L + M ++ +K++ FQ+LQGL +
Sbjct: 60 N-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMS 174
H HRDL +NLL++ + IK+ADFGLA Y + TL YRAPE+LL
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y++ VD+W+LG I AE++T LFPG E DQL++I +G+P E W G+ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDY 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
FPK + S ++P ++D SL+ + +DP KR +A AL HP FQ
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 175/290 (60%), Gaps = 9/290 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
MEKY ++++GEG++G V++A K G VA+K + R+ + +E + ++E+ L+++
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKEL 76
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
+ HPNIV L ++ L VFE+M+ +L +++ K ++++K + +Q+L+G+ +
Sbjct: 77 H-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H+ HRDL +NLL+++D +K+ADFGLA YT + TL YRAP++L+ S
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
+Y++ VD+W++G I AE+IT PLFPG +DDQL KI + +G+P W + EL
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
F + S +IP + + L+ + +DP KR +A +A+ HP F+
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 175/290 (60%), Gaps = 9/290 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
MEKY ++++GEG++G V++A K G VA+K + R+ + +E + ++E+ L+++
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRI--RLDAEDEGIPSTAIREISLLKEL 76
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
+ HPNIV L ++ L VFE+M+ +L +++ K ++++K + +Q+L+G+ +
Sbjct: 77 H-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H+ HRDL +NLL+++D +K+ADFGLA YT + TL YRAP++L+ S
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
+Y++ VD+W++G I AE+IT PLFPG +DDQL KI + +G+P W + EL
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
F + S +IP + + L+ + +DP KR +A +A+ HP F+
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 158/287 (55%), Gaps = 5/287 (1%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
ME Y + ++GEG++ V++ K + VA+K ++ C ++EV L+ + H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-H 59
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV L ++ L VFEY+D +L Q + + + VK + FQ+L+GL Y HRQ
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 121 GYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPP--YTEYITTLQYRAPEMLLMSGQY 177
HRDL +NLL++ +K+ADFGLA S P Y + TL YR P++LL S Y
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
++++DMW +G I E+ T PLFPG+ ++QL+ I +G+PTEE+W L + Y
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+PK + L P + D L+ L ++ R +A +A++HP F
Sbjct: 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 172/319 (53%), Gaps = 19/319 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS-WEECLN---LKEVKCLRKI 57
++Y + +GEG F V++A K + + VAIK +K S ++ +N L+E+K L+++
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
+ HPNI+ L + + VF++M+ +L ++ + + + +K + LQGL Y+
Sbjct: 70 S-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSC-PPYTEYITTLQYRAPEMLLMSG 175
H+ HRDL NLL+ N +K+ADFGLA S Y + T YRAPE+L +
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y VDMWA+G I+AEL+ P PG + DQL +I +G+PTEE W + L
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
Query: 236 YK-FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ-------GC 287
+K FP G L + +A DD + LI+ L ++PC R TA +AL+ F GC
Sbjct: 249 FKSFP---GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGC 305
Query: 288 -LQVPSMSIDSCKMRLTPS 305
L P+ +++ K + P+
Sbjct: 306 QLPRPNCPVETLKEQSNPA 324
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 166/293 (56%), Gaps = 16/293 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
M+KY +++IGEG++G V++A +++ E VA+K + R+ +E + L+E+ CL K
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK--RVRLDDDDEGVPSSALREI-CLLKE 57
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
H NIV+L ++ + +L VFE+ D +L + + VK++ FQ+L+GL +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVD---SCPPYTEYITTLQYRAPEMLLM 173
H + HRDL +NLL++ N +K+ADFGLA C Y+ + TL YR P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFG 175
Query: 174 SGQYNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ Y++ +DMW+ G I AEL PLFPG DDQL +I +G+PTEE W +L
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 233 AHGYK-FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
Y +P +L ++P N L++ L +P +R +A EALQHP F
Sbjct: 236 YKPYPMYP--ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 166/293 (56%), Gaps = 16/293 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
M+KY +++IGEG++G V++A +++ E VA+K + R+ +E + L+E+ CL K
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK--RVRLDDDDEGVPSSALREI-CLLKE 57
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
H NIV+L ++ + +L VFE+ D +L + + VK++ FQ+L+GL +
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVD---SCPPYTEYITTLQYRAPEMLLM 173
H + HRDL +NLL++ N +K+A+FGLA C Y+ + TL YR P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFG 175
Query: 174 SGQYNSKVDMWALGLIMAELITF-HPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ Y++ +DMW+ G I AEL PLFPG DDQL +I +G+PTEE W +L
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 233 AHGYK-FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
Y +P +L ++P N L++ L +P +R +A EALQHP F
Sbjct: 236 YKPYPMYPAT--TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 169/295 (57%), Gaps = 16/295 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
+++Y + ++GEG++G+V++AI + E VAIK + R+ EE + ++EV L+++
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI--RLEHEEEGVPGTAIREVSLLKEL 90
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
H NI++L+ + N+RL+ +FEY + +L + M ++ S +K++ +Q++ G+N+
Sbjct: 91 Q-HRNIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 118 HRQGYFHRDLISKNLLVS------NDTIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEM 170
H + HRDL +NLL+S +KI DFGLA +T I TL YR PE+
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI 208
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
LL S Y++ VD+W++ I AE++ PLFPG E DQL+KI +G P + +W G+
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP-GVTA 267
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIEL-LCSWDPCKRPTAAEALQHPLF 284
FPK +G L ++ + DDE + + DP KR +A AL+HP F
Sbjct: 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 165/290 (56%), Gaps = 10/290 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
MEKY +++IGEG++G V++A + GE A+K K R+ +E + ++E+ L+++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALK--KIRLEKEDEGIPSTTIREISILKEL 57
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
H NIVKL ++ RL VFE++D +L +L+ + K++ Q+L G+ Y
Sbjct: 58 K-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H + HRDL +NLL++ + +KIADFGLA YT I TL YRAP++L+ S
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
+Y++ +D+W++G I AE++ PLFPG E DQL +I +G+P ++W EL K +
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YD 235
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
F + + ++ + L+ + DP +R TA +AL+H F+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 165/290 (56%), Gaps = 10/290 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
MEKY +++IGEG++G V++A + GE A+K K R+ +E + ++E+ L+++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALK--KIRLEKEDEGIPSTTIREISILKEL 57
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
H NIVKL ++ RL VFE++D +L +L+ + K++ Q+L G+ Y
Sbjct: 58 K-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H + HRDL +NLL++ + +KIADFGLA YT + TL YRAP++L+ S
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
+Y++ +D+W++G I AE++ PLFPG E DQL +I +G+P ++W EL K +
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YD 235
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
F + + ++ + L+ + DP +R TA +AL+H F+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 165/290 (56%), Gaps = 10/290 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
MEKY +++IGEG++G V++A + GE A+K K R+ +E + ++E+ L+++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALK--KIRLEKEDEGIPSTTIREISILKEL 57
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
H NIVKL ++ RL VFE++D +L +L+ + K++ Q+L G+ Y
Sbjct: 58 K-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H + HRDL +NLL++ + +KIADFGLA YT + TL YRAP++L+ S
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
+Y++ +D+W++G I AE++ PLFPG E DQL +I +G+P ++W EL K +
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YD 235
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
F + + ++ + L+ + DP +R TA +AL+H F+
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 164 bits (414), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 162/297 (54%), Gaps = 19/297 (6%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIK-KQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
++Y + +IGEG++GKV++A K G +VA+K + R+ + EE + ++EV LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK--RVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 58 NN--HPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAE-VKNWCFQ 109
HPN+V+L ++ +L VFE++D +L + + E +K+ FQ
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 110 ILQGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+L+GL+++H HRDL +N+LV S+ IK+ADFGLA T + TL YRAP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+LL S Y + VD+W++G I AE+ PLF G+ + DQL KI + IG P EE W +
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L + F + + ++ L+ +++P KR +A AL HP FQ
Sbjct: 248 ALPRQ---AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 158/291 (54%), Gaps = 18/291 (6%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKIN- 58
+Y + +IG G++G V++A SG +VA+K++ R+ + EE L ++EV LR++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEA 62
Query: 59 -NHPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAE-VKNWCFQIL 111
HPN+V+L ++ ++ VFE++D +L + AE +K+ Q L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 112 QGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
+GL+++H HRDL +N+LV S T+K+ADFGLA + TL YRAPE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
LL S Y + VDMW++G I AE+ PLF G E DQL KI + IG P E+ W + L
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
+ FP + ++P + L+ + +++P KR +A ALQH
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 162/297 (54%), Gaps = 19/297 (6%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIK-KQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
++Y + +IGEG++GKV++A K G +VA+K + R+ + EE + ++EV LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK--RVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 58 NN--HPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAE-VKNWCFQ 109
HPN+V+L ++ +L VFE++D +L + + E +K+ FQ
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 110 ILQGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+L+GL+++H HRDL +N+LV S+ IK+ADFGLA T + TL YRAP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+LL S Y + VD+W++G I AE+ PLF G+ + DQL KI + IG P EE W +
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L + F + + ++ L+ +++P KR +A AL HP FQ
Sbjct: 248 ALPRQ---AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 162/297 (54%), Gaps = 19/297 (6%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIK-KQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKI 57
++Y + +IGEG++GKV++A K G +VA+K + R+ + EE + ++EV LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK--RVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 58 NN--HPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAE-VKNWCFQ 109
HPN+V+L ++ +L VFE++D +L + + E +K+ FQ
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 110 ILQGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+L+GL+++H HRDL +N+LV S+ IK+ADFGLA T + TL YRAP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+LL S Y + VD+W++G I AE+ PLF G+ + DQL KI + IG P EE W +
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L + F + + ++ L+ +++P KR +A AL HP FQ
Sbjct: 248 ALPRQ---AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 158/291 (54%), Gaps = 18/291 (6%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKIN- 58
+Y + +IG G++G V++A SG +VA+K++ R+ + EE L ++EV LR++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEA 62
Query: 59 -NHPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAE-VKNWCFQIL 111
HPN+V+L ++ ++ VFE++D +L + AE +K+ Q L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 112 QGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
+GL+++H HRDL +N+LV S T+K+ADFGLA + TL YRAPE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
LL S Y + VDMW++G I AE+ PLF G E DQL KI + IG P E+ W + L
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
+ FP + ++P + L+ + +++P KR +A ALQH
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 158/291 (54%), Gaps = 18/291 (6%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL---NLKEVKCLRKIN- 58
+Y + +IG G++G V++A SG +VA+K++ R+ + EE L ++EV LR++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEA 62
Query: 59 -NHPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAE-VKNWCFQIL 111
HPN+V+L ++ ++ VFE++D +L + AE +K+ Q L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 112 QGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
+GL+++H HRDL +N+LV S T+K+ADFGLA + TL YRAPE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
LL S Y + VDMW++G I AE+ PLF G E DQL KI + IG P E+ W + L
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
+ FP + ++P + L+ + +++P KR +A ALQH
Sbjct: 242 PRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 156/298 (52%), Gaps = 29/298 (9%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS-------WEECLNLKEVKCLRK 56
Y +G G++G V AI K+SGE VAIK L + S + E L LK ++
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ---- 81
Query: 57 INNHPNIVKLQELASEN------YRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQI 110
H N++ L ++ + Y Y V +M +L ++M + FSE +++ +Q+
Sbjct: 82 ---HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK---FSEEKIQYLVYQM 135
Query: 111 LQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPE 169
L+GL Y+H G HRDL NL V+ D +KI DFGLA D+ T Y+ T YRAPE
Sbjct: 136 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPE 193
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL- 228
++L YN VD+W++G IMAE++T LF G DQL +I G P E + + L
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLN 252
Query: 229 -ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
+ AK++ P+ + + L P A+ L+E + D KR TAA+AL HP F+
Sbjct: 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 155/298 (52%), Gaps = 29/298 (9%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS-------WEECLNLKEVKCLRK 56
Y +G G++G V AI K+SGE VAIK L + S + E L LK ++
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ---- 99
Query: 57 INNHPNIVKLQELASEN------YRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQI 110
H N++ L ++ + Y Y V +M +L ++M FSE +++ +Q+
Sbjct: 100 ---HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME---FSEEKIQYLVYQM 153
Query: 111 LQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPE 169
L+GL Y+H G HRDL NL V+ D +KI DFGLA D+ T Y+ T YRAPE
Sbjct: 154 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPE 211
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL- 228
++L YN VD+W++G IMAE++T LF G DQL +I G P E + + L
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLN 270
Query: 229 -ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
+ AK++ P+ + + L P A+ L+E + D KR TAA+AL HP F+
Sbjct: 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 154/292 (52%), Gaps = 17/292 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK----QRIYSWEECLNLKEVKCLRKIN 58
+Y + +IG G++G V++A SG +VA+K+++ ++EV LR++
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 59 --NHPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAE-VKNWCFQI 110
HPN+V+L ++ ++ VFE++D +L + AE +K+ Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 111 LQGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPE 169
L+GL+++H HRDL +N+LV S T+K+ADFGLA T + TL YRAPE
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE 229
+LL S Y + VDMW++G I AE+ PLF G E DQL KI + IG P E+ W +
Sbjct: 190 VLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 230 LAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
L + FP + ++P + L+ + +++P KR +A ALQH
Sbjct: 249 LPRG---AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 171/326 (52%), Gaps = 45/326 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY-SWEECLNLKEVKCLRKINN 59
+ KY L+K++G+G++G VW++I +++GE VA+K + S + +E+ L +++
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 60 HPNIVKL-QELASENYR-LYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
H NIV L L ++N R +Y VF+YM+ +LH ++ R + +Q+++ + Y+
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI--RANILEPVHKQYVVYQLIKVIKYL 125
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEV----------------------DSCP 154
H G HRD+ N+L++ + +K+ADFGL+ D P
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
T+Y+ T YRAPE+LL S +Y +DMW+LG I+ E++ P+FPG+ +QL +I
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 215 AIGSPTE---------------ESWAEGLELAKAHGYKFPKLQGNNLSLLIPSA--NDDE 257
I P+ ES E +E+ +++ N L + P A N++
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305
Query: 258 MSLIELLCSWDPCKRPTAAEALQHPL 283
+ L++ L ++P KR +A +AL+HP
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPF 331
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 22/301 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ L +GEG++G V A K +GE VAIK ++ L+E+K L+ H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENI 71
Query: 64 VKLQELAS----ENY-RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
+ + + EN+ +Y + E M +LH+++S Q S+ ++ + +Q L+ + +H
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPP-----------YTEYITTLQYR 166
HRDL NLL+ SN +K+ DFGLA +D TEY+ T YR
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 167 APEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE 226
APE++L S +Y+ +D+W+ G I+AEL P+FPG QL I IG+P ++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 227 GLELAKAHGY--KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+E +A Y P L + P N + L++ + +DP KR TA EAL+HP
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 285 Q 285
Q
Sbjct: 310 Q 310
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 152/301 (50%), Gaps = 22/301 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ L +GEG++G V A K +GE VAIK ++ L+E+K L+ H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENI 71
Query: 64 VKLQELAS----ENY-RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
+ + + EN+ +Y + E M +LH+++S Q S+ ++ + +Q L+ + +H
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPP-----------YTEYITTLQYR 166
HRDL NLL+ SN +K+ DFGLA +D TE + T YR
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 167 APEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE 226
APE++L S +Y+ +D+W+ G I+AEL P+FPG QL I IG+P ++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 227 GLELAKAHGY--KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+E +A Y P L + P N + L++ + +DP KR TA EAL+HP
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 285 Q 285
Q
Sbjct: 310 Q 310
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 153/301 (50%), Gaps = 22/301 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ L +GEG++G V A K +GE VAIK ++ L+E+K L+ H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENI 71
Query: 64 VKLQEL----ASENY-RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
+ + + + EN+ +Y + E M +LH+++S Q S+ ++ + +Q L+ + +H
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH 129
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPP-----------YTEYITTLQYR 166
HRDL NLL+ SN +K+ DFGLA +D E++ T YR
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 167 APEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE 226
APE++L S +Y+ +D+W+ G I+AEL P+FPG QL I IG+P ++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 227 GLELAKAHGY--KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+E +A Y P L + P N + L++ + +DP KR TA EAL+HP
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 285 Q 285
Q
Sbjct: 310 Q 310
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 159/303 (52%), Gaps = 5/303 (1%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKA-LKQRIYSWEECLNLKEVKCLRKINN 59
MEKY + +IGEGS+G V++ + +G+ VAIK L+ + + L+E++ L+++
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK- 60
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPN+V L E+ RL+ VFEY D + + ++ E VK+ +Q LQ +N+ H+
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPY-TEYITTLQYRAPEMLLMSGQY 177
HRD+ +N+L++ + IK+ DFG A + Y + + T YR+PE+L+ QY
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
VD+WA+G + AEL++ PL+PG + DQLY I +G G K
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240
Query: 238 FPKLQG-NNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSID 296
P + L L P+ + + L++ DP +R T + L HP F+ ++ ++ +
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKE 300
Query: 297 SCK 299
K
Sbjct: 301 HDK 303
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 159/293 (54%), Gaps = 12/293 (4%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ ++++G G++ V++ + K +G YVA+K +K ++E+ ++++ H N
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK-HEN 64
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-----QCFSEAEVKNWCFQILQGLNYM 117
IV+L ++ +L VFE+MD +L + M +R + VK + +Q+LQGL +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H HRDL +NLL++ +K+ DFGLA ++ + TL YRAP++L+ S
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y++ +D+W+ G I+AE+IT PLFPGT +++QL I + +G+P E W +L K +
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244
Query: 236 YKFPKLQGNNLSLLIPSAND----DEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ + +L P + + M + L +P R +A +AL HP F
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 160/300 (53%), Gaps = 22/300 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN----LKEVKCLRKI 57
++Y +++ IG G++G V A ++ +G+ VAIK + +++ N L+E+K L+
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN---AFDVVTNAKRTLRELKILKHF 110
Query: 58 NNHPNIVKLQELA------SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQIL 111
H NI+ ++++ E +Y V + M+ +LHQ++ + Q + V+ + +Q+L
Sbjct: 111 K-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLL 168
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPP-----YTEYITTLQY 165
+GL YMH HRDL NLLV+ + +KI DFG+A + + P TEY+ T Y
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 228
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEES-W 224
RAPE++L +Y +D+W++G I E++ LFPG QL I +G+P+
Sbjct: 229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
A G E +A+ P Q + P A+ +SL+ + ++P R +AA AL+HP
Sbjct: 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 160/300 (53%), Gaps = 22/300 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN----LKEVKCLRKI 57
++Y +++ IG G++G V A ++ +G+ VAIK + +++ N L+E+K L+
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN---AFDVVTNAKRTLRELKILKHF 111
Query: 58 NNHPNIVKLQELA------SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQIL 111
H NI+ ++++ E +Y V + M+ +LHQ++ + Q + V+ + +Q+L
Sbjct: 112 K-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLL 169
Query: 112 QGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPP-----YTEYITTLQY 165
+GL YMH HRDL NLLV+ N +KI DFG+A + + P TEY+ T Y
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 229
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEES-W 224
RAPE++L +Y +D+W++G I E++ LFPG QL I +G+P+
Sbjct: 230 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 289
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
A G E +A+ P Q + P A+ +SL+ + ++P R +AA AL+HP
Sbjct: 290 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 22/295 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL----KQRIYSWEECLNLKEVKCLRKINN 59
Y ++ +G G++G V A+ ++G VAIK L + +++ L+ +K +R
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR---- 82
Query: 60 HPNIVKLQELASENYRL------YFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQG 113
H N++ L ++ + + L Y V +M +L +LM + K E ++ +Q+L+G
Sbjct: 83 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK--LGEDRIQFLVYQMLKG 140
Query: 114 LNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
L Y+H G HRDL NL V+ D +KI DFGLA + DS + T YRAPE++L
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS--EMXGXVVTRWYRAPEVIL 198
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+Y VD+W++G IMAE+IT LF G+ DQL +I G+P E + + L+ +
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE-FVQRLQSDE 257
Query: 233 AHGY--KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y P+L+ + + ++ +A+ ++L+E + D +R TA EAL HP F+
Sbjct: 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 16/292 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR-HEN 84
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 142
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ + +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E G+ L K
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINL-K 261
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y N + + L P+A+ + L++ + +++P KR +AL HP
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 75
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 252
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 88
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 89 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 207
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 265
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 266 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q + +E++ +RK++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLD-HCNI 75
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 252
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 154
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 155 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 273
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 331
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 332 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 80
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 81 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 199
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 257
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 258 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 109
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 110 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 228
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 286
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 103
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 104 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 222
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 280
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 281 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 111
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 112 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 230
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 288
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 289 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 82
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 140
Query: 118 HRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL+ + +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL-K 259
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 113
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 114 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 232
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 290
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 291 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 82
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 140
Query: 118 HRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL+ + +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL-K 259
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR-HEN 86
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 144
Query: 118 HRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL+ + +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 263
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 151/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q + +E++ +RK++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLD-HCNI 75
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P YI + YRAPE++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 252
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ FP+++ + + P + ++L L + P R T EA H F
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
+ YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 155/287 (54%), Gaps = 14/287 (4%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPNIVK 65
++ +G G++G V A + + VA+K L + S +E++ L+ + H N++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK-HENVIG 91
Query: 66 LQELAS-----ENY-RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
L ++ + E++ +Y V M +L+ ++ + Q S+ V+ +Q+L+GL Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV--KSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
G HRDL N+ V+ D+ ++I DFGLA + D T Y+ T YRAPE++L YN
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNWMHYN 207
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAKAHGYK 237
VD+W++G IMAEL+ LFPG+ DQL +I +G+P+ E A+ E A+ +
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
P + +LS + AN + L+ + D +R +AAEAL H F
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 82
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 140
Query: 118 HRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL+ + +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 259
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 75
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 252
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 86
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 144
Query: 118 HRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL+ + +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 263
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 82
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 140
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 259
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 84
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 142
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 261
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 76
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 77 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 195
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 253
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 254 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 75
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 252
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 90
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 148
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 267
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 268 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 82
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 140
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 259
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 260 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 87
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 88 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 264
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 102
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 160
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 279
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 280 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 80
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 138
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 257
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 258 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 79
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 80 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 198
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 256
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 257 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 94
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 95 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 213
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 271
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 272 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 87
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 88 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 264
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ + Q ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ + Q ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 76
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 134
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 192
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 253 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 87
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 145
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 264
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 265 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 88
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 146
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 265
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 266 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 79
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 137
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 256
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 257 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 86
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 144
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 263
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 83
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 84 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 202
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 260
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 261 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 100
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 158
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 216
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 277 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 102
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V M +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL--KTQHLSNDHICYFLYQILRGLKYI 160
Query: 118 HRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL+ + +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 279
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 280 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 150/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q + +E++ +RK++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLD-HCNI 75
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 76 VRLRYFFYSSGEKKDEVY-LNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 252
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ FP+++ + + P + ++L L + P R T EA H F
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 86
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 144
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D+ +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 263 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 86
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 144
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 263 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 90
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 148
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 206
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 266
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 267 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 99
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 157
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 215
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 276 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 152/293 (51%), Gaps = 16/293 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V + +SG +A+K L + S +E++ L+ + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 109
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 167
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 168 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 225
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
YN VD+W++G IMAEL+T LFPGT +QL +I G+P S + +A
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPP-ASVISRMPSHEA 284
Query: 234 HGY--KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
Y P++ N + + AN + L+E + D KR TA+EAL HP F
Sbjct: 285 RNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 152/294 (51%), Gaps = 22/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 109
Query: 64 VKLQ-------ELASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQG 113
V+L+ E E Y L V +Y+ ++++ S KQ VK + +Q+ +
Sbjct: 110 VRLRYFFYSSGEKKDEVY-LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 114 LNYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEML 171
L Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 228
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNP 286
Query: 232 KAHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 152/292 (52%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 82
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ + Q ++ V+ +QIL+GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQILRGL 140
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D+ +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 76
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ K ++ V+ +QIL+GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLIYQILRGL 134
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 192
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 253 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 155/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 80
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 138
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP +E + L K
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINL-K 257
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 258 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 155/287 (54%), Gaps = 14/287 (4%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPNIVK 65
++ +G G++G V A + + VA+K L + S +E++ L+ + H N++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK-HENVIG 91
Query: 66 LQELAS-----ENY-RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
L ++ + E++ +Y V M +L+ ++ + Q S+ V+ +Q+L+GL Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
G HRDL N+ V+ D+ ++I DFGLA + D T Y+ T YRAPE++L YN
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNWMHYN 207
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAKAHGYK 237
VD+W++G IMAEL+ LFPG+ DQL +I +G+P+ E A+ E A+ +
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
P + +LS + AN + L+ + D +R +AAEAL H F
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + IG G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 85
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 143
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAI+ + + L+E+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFR-HEN 86
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 144
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 263
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 85
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 143
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 100
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 158
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 216
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 277 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 154/292 (52%), Gaps = 16/292 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR-HEN 84
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 142
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 261
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y N + + L P+A+ + L++ + +++P KR +AL HP
Sbjct: 262 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 76
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 134
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 192
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 253 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 152/292 (52%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ ++K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D+ +KI DFGL D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 77
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 135
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 193
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 253
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 254 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 92
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 150
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 208
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 269 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT ++ IGEG++G V A VAIK + + L+E++ L + H N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR-HEN 102
Query: 63 IVKLQELAS----ENYR-LYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
++ ++++ E R +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLL--KSQQLSNDHICYFLYQILRGLKYI 160
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAW----EVDSCPPYTEYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA E D TE + T YRAPE++L
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + + K
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINM-K 279
Query: 233 AHGY--KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y P + L P ++ + L++ + +++P KR T EAL HP +
Sbjct: 280 ARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 92
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 150
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 208
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 269 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 156/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 86
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KCQHLSNDHICYFLYQILRGLKYI 144
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T EY+ T YRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 263
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMK-H 92
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 150
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 208
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 268
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 269 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 77
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 135
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 193
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 253
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 254 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 152/293 (51%), Gaps = 13/293 (4%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKA-LKQRIYSWEECLNLKEVKCLRKINN 59
MEKY + +GEGS+G V + K +G VAIK L+ + + ++E+K L+++
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR- 82
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
H N+V L E+ + R Y VFE++D + + V+ + FQI+ G+ + H
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPP--YTEYITTLQYRAPEMLLMSGQ 176
HRD+ +N+LVS + +K+ DFG A + + P Y + + T YRAPE+L+ +
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGS---PTEESWAEGLELAKA 233
Y VD+WA+G ++ E+ PLFPG + DQLY I +G+ +E + + A
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA-- 259
Query: 234 HGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
G + P+++ L P ++ + L + DP KRP AE L H FQ
Sbjct: 260 -GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 78
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 136
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 137 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 194
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 254
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 255 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 91
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 149
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 207
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 267
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 268 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 91
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 149
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 207
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 267
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 268 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 82
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 140
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 85
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 143
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 99
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 157
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 215
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 275
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 276 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 103
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 161
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 219
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 279
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 280 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 82
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 140
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 87
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 145
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 203
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 82
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 140
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 198
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 258
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 259 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 154/287 (53%), Gaps = 14/287 (4%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPNIVK 65
++ +G G++G V A + + VA+K L + S +E++ L+ + H N++
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK-HENVIG 83
Query: 66 LQELAS-----ENY-RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
L ++ + E++ +Y V M +L+ ++ + Q S+ V+ +Q+L+GL Y+H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
G HRDL N+ V+ D ++I DFGLA + D T Y+ T YRAPE++L YN
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNWMHYN 199
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAKAHGYK 237
VD+W++G IMAEL+ LFPG+ DQL +I +G+P+ E A+ E A+ +
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 259
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
P + +LS + AN + L+ + D +R +AAEAL H F
Sbjct: 260 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 85
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 143
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 201
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 261
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 262 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 79
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 137
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 195
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 255
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 256 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 86
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 144
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 263 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 150/293 (51%), Gaps = 20/293 (6%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA SGE VAIK + Q ++ +E++ +RK++ H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLD-HCNI 75
Query: 64 VKLQEL------ASENYRLYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQGL 114
V+L+ + L V +Y+ ++++ S KQ VK + +Q+ + L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 115 NYMHRQGYFHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
Y+H G HRD+ +NLL+ DT +K+ DFG A ++ P I + YRAPE++
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ Y S +D+W+ G ++AEL+ P+FPG DQL +I +G+PT E E
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE--MNPN 253
Query: 233 AHGYKFPKLQGNN-LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+KFP+++ + + P + ++L L + P R T EA H F
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 86
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 144
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T Y+ T YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLN 202
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 262
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 263 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI D+GLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 21/294 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YT K IG GSFG V+QA +S E VAIK + Q ++ +E++ +R I HPN+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ-----DKRFKNRELQIMR-IVKHPNV 94
Query: 64 VKLQELASENYR------LYFVFEYMDCNLHQLM---SNRKQCFSEAEVKNWCFQILQGL 114
V L+ N L V EY+ +++ + KQ +K + +Q+L+ L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 115 NYMHRQGYFHRDLISKNLLVS--NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
Y+H G HRD+ +NLL+ + +K+ DFG A + + P I + YRAPE++
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ Y + +D+W+ G +MAEL+ PLFPG DQL +I +G+P+ E
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274
Query: 233 AHGYKFPKLQGNNLS-LLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
H KFP+++ + S + P D + LI L + P R TA EAL HP F
Sbjct: 275 EH--KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 76
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 134
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D ++ T YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLN 192
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 252
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 253 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 86
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 144
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T E + T YRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 263
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 16/295 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+YT + IGEG++G V A + VAIK + + L+E+K L + H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 87
Query: 63 IVKLQELA-----SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
I+ + ++ + +Y V + M+ +L++L+ + Q S + + +QIL+GL Y+
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYI 145
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT----EYITTLQYRAPEMLL 172
H HRDL NLL++ +KI DFGLA D +T E + T YRAPE++L
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
S Y +D+W++G I+AE+++ P+FPG DQL I +GSP++E + L K
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL-K 264
Query: 233 AHGYKFPKLQGNNL--SLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y N + + L P+A+ + L++ + +++P KR +AL HP +
Sbjct: 265 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 87
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 145
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA + T Y+ T YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLN 203
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D ++ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 87
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 145
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA + T Y+ T YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLN 203
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 87
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 145
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA + T Y+ T YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLN 203
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D ++ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 34/309 (11%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIK-ALKQRIYSWEECLNLKEVKCLRKINN 59
+ KY + +IG+G+FG+V++A +++G+ VA+K L + L+E+K L+ +
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK- 74
Query: 60 HPNIVKLQEL----ASENYR----LYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQIL 111
H N+V L E+ AS R +Y VF++ + +L L+SN F+ +E+K +L
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEV----DSCP-PYTEYITTLQY 165
GL Y+HR HRD+ + N+L++ D + K+ADFGLA +S P Y + TL Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWA 225
R PE+LL Y +D+W G IMAE+ T P+ G E QL I GS T E W
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254
Query: 226 --------EGLELAKAHGYKFPKLQGNNLSLLI--PSANDDEMSLIELLCSWDPCKRPTA 275
E LEL K K + L + P A D LI+ L DP +R +
Sbjct: 255 NVDNYELYEKLELVKGQKRKV----KDRLKAYVRDPYALD----LIDKLLVLDPAQRIDS 306
Query: 276 AEALQHPLF 284
+AL H F
Sbjct: 307 DDALNHDFF 315
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 103
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 161
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D Y+ T YRAPE++L
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMXGYVATRWYRAPEIMLN 219
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 279
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 280 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 34/309 (11%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIK-ALKQRIYSWEECLNLKEVKCLRKINN 59
+ KY + +IG+G+FG+V++A +++G+ VA+K L + L+E+K L+ +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK- 75
Query: 60 HPNIVKLQEL----ASENYR----LYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQIL 111
H N+V L E+ AS R +Y VF++ + +L L+SN F+ +E+K +L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEV----DSCP-PYTEYITTLQY 165
GL Y+HR HRD+ + N+L++ D + K+ADFGLA +S P Y + TL Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWA 225
R PE+LL Y +D+W G IMAE+ T P+ G E QL I GS T E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 226 --------EGLELAKAHGYKFPKLQGNNLSLLI--PSANDDEMSLIELLCSWDPCKRPTA 275
E LEL K K + L + P A D LI+ L DP +R +
Sbjct: 256 NVDNYELYEKLELVKGQKRKVK----DRLKAYVRDPYALD----LIDKLLVLDPAQRIDS 307
Query: 276 AEALQHPLF 284
+AL H F
Sbjct: 308 DDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 34/309 (11%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIK-ALKQRIYSWEECLNLKEVKCLRKINN 59
+ KY + +IG+G+FG+V++A +++G+ VA+K L + L+E+K L+ +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK- 75
Query: 60 HPNIVKLQEL----ASENYR----LYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQIL 111
H N+V L E+ AS R +Y VF++ + +L L+SN F+ +E+K +L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEV----DSCP-PYTEYITTLQY 165
GL Y+HR HRD+ + N+L++ D + K+ADFGLA +S P Y + TL Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWA 225
R PE+LL Y +D+W G IMAE+ T P+ G E QL I GS T E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 226 --------EGLELAKAHGYKFPKLQGNNLSLLI--PSANDDEMSLIELLCSWDPCKRPTA 275
E LEL K K + L + P A D LI+ L DP +R +
Sbjct: 256 NVDNYELYEKLELVKGQKRKVK----DRLKAYVRDPYALD----LIDKLLVLDPAQRIDS 307
Query: 276 AEALQHPLF 284
+AL H F
Sbjct: 308 DDALNHDFF 316
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DF LA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D T + T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGXVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 34/309 (11%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIK-ALKQRIYSWEECLNLKEVKCLRKINN 59
+ KY + +IG+G+FG+V++A +++G+ VA+K L + L+E+K L+ +
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK- 75
Query: 60 HPNIVKLQEL----ASENYR----LYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQIL 111
H N+V L E+ AS R +Y VF++ + +L L+SN F+ +E+K +L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEV----DSCP-PYTEYITTLQY 165
GL Y+HR HRD+ + N+L++ D + K+ADFGLA +S P Y + TL Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWA 225
R PE+LL Y +D+W G IMAE+ T P+ G E QL I GS T E W
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 226 --------EGLELAKAHGYKFPKLQGNNLSLLI--PSANDDEMSLIELLCSWDPCKRPTA 275
E LEL K K + L + P A D LI+ L DP +R +
Sbjct: 256 NVDNYELYEKLELVKGQKRKV----KDRLKAYVRDPYALD----LIDKLLVLDPAQRIDS 307
Query: 276 AEALQHPLF 284
+AL H F
Sbjct: 308 DDALNHDFF 316
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 166/352 (47%), Gaps = 71/352 (20%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNH 60
++Y + IG GS+G V +A K VAIK + + +C L+E+ L ++N H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN-H 111
Query: 61 PNIVKLQELA----SENY-RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
++VK+ ++ E + LY V E D + +L +E +K + +L G+
Sbjct: 112 DHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT-PVYLTELHIKTLLYNLLVGVK 170
Query: 116 YMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-------SCP------------- 154
Y+H G HRDL N LV+ D ++K+ DFGLA VD P
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 155 PYTE--------YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAEL-------ITFH-- 197
P+T+ ++ T YRAPE++L+ Y +D+W++G I AEL + +H
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290
Query: 198 --PLFPGTC--------------------EDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
PLFPG+ DQL I N +G+P+EE E LE A
Sbjct: 291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDI-EALEKEDAKR 349
Query: 236 Y--KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
Y FPK +G +L+ P+++ D + L++ + ++P KR T E L HP F+
Sbjct: 350 YIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI FGLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI D GLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI D GLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 150/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 80
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI D GLA D T Y+ T YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD--EMTGYVATRWYRAPEIMLN 196
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 256
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 257 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 149/292 (51%), Gaps = 14/292 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNH 60
E+Y + +G G++G V A ++G VA+K L + S +E++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-H 100
Query: 61 PNIVKLQELAS------ENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N++ L ++ + E +Y V M +L+ ++ +K ++ V+ +QIL+GL
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGL 158
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
Y+H HRDL NL V+ D +KI DFGLA D + T YRAPE++L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMXGXVATRWYRAPEIMLN 216
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE-GLELAK 232
YN VD+W++G IMAEL+T LFPGT DQL I +G+P E + E A+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 276
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ ++ N + + AN + L+E + D KR TAA+AL H F
Sbjct: 277 NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 142/301 (47%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K+ NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G+IM E+I LFPGT DQ K+ +G+P+ E + +
Sbjct: 200 MG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 142/301 (47%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K+ NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G+IM E+I LFPGT DQ K+ +G+P+ E + +
Sbjct: 200 MG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 140/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K+ NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P+ E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDE---------MSLIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 141/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K+ NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P+ E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 20/304 (6%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEV----KCLRKIN- 58
YT+ + I GS+G V + + G VAIK + + L + + LR+I
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 59 ----NHPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQ 109
+HPNI+ L+++ ++LY V E M +L Q++ +++ S ++ + +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 110 ILQGLNYMHRQGYFHRDLISKN-LLVSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
IL GL+ +H G HRDL N LL N+ I I DF LA E + T Y+T YRAP
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+++ + VDMW+ G +MAE+ LF G+ +QL KI +G+P E
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM-F 261
Query: 229 ELAKAHGY---KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y + + ++P+A+ + LI + ++P +R + +AL+HP F+
Sbjct: 262 SSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
Query: 286 GCLQ 289
Sbjct: 322 SLFD 325
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 20/304 (6%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEV----KCLRKIN- 58
YT+ + I GS+G V + + G VAIK + + L + + LR+I
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 59 ----NHPNIVKLQEL-----ASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQ 109
+HPNI+ L+++ ++LY V E M +L Q++ +++ S ++ + +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 110 ILQGLNYMHRQGYFHRDLISKN-LLVSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
IL GL+ +H G HRDL N LL N+ I I DF LA E + T Y+T YRAP
Sbjct: 143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+++ + VDMW+ G +MAE+ LF G+ +QL KI +G+P E
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM-F 261
Query: 229 ELAKAHGY---KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
A Y + + ++P+A+ + LI + ++P +R + +AL+HP F+
Sbjct: 262 SSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
Query: 286 GCLQ 289
Sbjct: 322 SLFD 325
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGI 132
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 193 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 282 P 282
P
Sbjct: 312 P 312
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 140/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P+ E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 140/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P+ E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 140/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P+ E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 132
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 193 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 282 P 282
P
Sbjct: 312 P 312
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 133
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 194 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 282 P 282
P
Sbjct: 313 P 313
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 138
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 199 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 257
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 258 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 317
Query: 282 P 282
P
Sbjct: 318 P 318
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 140
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 201 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 282 P 282
P
Sbjct: 320 P 320
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 177
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 238 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 282 P 282
P
Sbjct: 357 P 357
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 140
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 201 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 282 P 282
P
Sbjct: 320 P 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 133
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 194 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 282 P 282
P
Sbjct: 313 P 313
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 177
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 238 MG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D E + L+ + DP KR + +ALQH
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 282 P 282
P
Sbjct: 357 P 357
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 140
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P E + +
Sbjct: 201 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319
Query: 282 P 282
P
Sbjct: 320 P 320
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 157/348 (45%), Gaps = 67/348 (19%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNH 60
+ Y + IG GS+G V+ A K + + VAIK + + +C L+E+ L ++ +
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 61 PNIVKLQELASENY-----RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
I++L +L + LY V E D +L +L +E +K + +L G N
Sbjct: 86 -YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEEHIKTILYNLLLGEN 143
Query: 116 YMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDS---------------CPPY--- 156
++H G HRDL N L++ D ++K+ DFGLA ++S P+
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 157 -----TEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF-----------HPLF 200
T ++ T YRAPE++L+ Y +D+W+ G I AEL+ PLF
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLF 263
Query: 201 PGT-----------------CEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK----FP 239
PG+ DQL I N IG+PTE+ + K K FP
Sbjct: 264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLK---NINKPEVIKYIKLFP 320
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ NL PS +DD ++L+E + ++P KR T +AL HP +
Sbjct: 321 HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 139/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A G VA+K L + + L K NH
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGI 137
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILG 197
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM EL+ +F GT DQ K+ +G+P+ E A +
Sbjct: 198 MG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRN 256
Query: 234 HGYKFPKLQGNNLSLLIPS------ANDDEM------SLIELLCSWDPCKRPTAAEALQH 281
+ P G L P + D++ L+ + DP KR + EAL+H
Sbjct: 257 YVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRH 316
Query: 282 P 282
P
Sbjct: 317 P 317
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 141/301 (46%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A G VA+K L + + L K NH
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y + VD+W++G IM EL+ +F GT DQ K+ +G+P+ E A +
Sbjct: 200 MG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRN 258
Query: 234 HGYKFPKLQGNNLSLLIPS------ANDDEM------SLIELLCSWDPCKRPTAAEALQH 281
+ PK G L P + D++ L+ + DP KR + EAL+H
Sbjct: 259 YVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T + T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 144
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 204
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 205 MG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 263
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 264 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 323
Query: 282 P 282
P
Sbjct: 324 P 324
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 133
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + T Y+ T YRAPE++L
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 194 MG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 252
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 253 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 312
Query: 282 P 282
P
Sbjct: 313 P 313
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 150/304 (49%), Gaps = 32/304 (10%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNH 60
+Y +K +G G G V+ A+ + VAIK + + + + + L+E+K +R+++ H
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI---VLTDPQSVKHALREIKIIRRLD-H 67
Query: 61 PNIVKLQELA--------------SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNW 106
NIVK+ E+ +E +Y V EYM+ +L ++ + E + +
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL--EQGPLLEEHARLF 125
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYT------E 158
+Q+L+GL Y+H HRDL NL ++ + +KI DFGLA +D P Y+ E
Sbjct: 126 MYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD--PHYSHKGHLSE 183
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGS 218
+ T YR+P +LL Y +DMWA G I AE++T LF G E +Q+ I +I
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 219 PTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEA 278
EE E L + + L+ L+P + + + +E + ++ P R TA EA
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 279 LQHP 282
L HP
Sbjct: 304 LSHP 307
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + + +Q+L G+
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 141
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + ++ T YRAPE++L
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILG 201
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E+I LFPGT DQ K+ +G+P E + +
Sbjct: 202 MG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 260
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 261 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 320
Query: 282 P 282
P
Sbjct: 321 P 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 135/301 (44%), Gaps = 23/301 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + + T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y VD+W++G IM E++ LFPG DQ K+ +G+P E + +
Sbjct: 200 MG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 234 HGYKFPKLQGNNLSLLIPSA---NDDEMS---------LIELLCSWDPCKRPTAAEALQH 281
+ PK G + L P D E + L+ + D KR + EALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 282 P 282
P
Sbjct: 319 P 319
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 56/330 (16%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+KY+L K +G GSFG V + +SG+ A+K + Q L++ K+ +H
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDI------MKVLDHV 60
Query: 62 NIVKLQEL--------------------------------------ASENYRLYFVFEYM 83
NI+KL + S+N L + EY+
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 84 DCNLHQLMSN---RKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS--NDT 138
LH+++ + + + + +Q+ + + ++H G HRD+ +NLLV+ ++T
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 139 IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHP 198
+K+ DFG A ++ P I + YRAPE++L + +Y +D+W++G + ELI P
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 199 LFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH--GYKFPKLQGNNLSLLIPSANDD 256
LF G DQL +I +G+PT+E H +FP L+ + ++P
Sbjct: 241 LFSGETSIDQLVRIIQIMGTPTKEQMIR----MNPHYTEVRFPTLKAKDWRKILPEGTPS 296
Query: 257 -EMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
+ L+E + ++P R EA+ HP F
Sbjct: 297 LAIDLLEQILRYEPDLRINPYEAMAHPFFD 326
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 158/315 (50%), Gaps = 44/315 (13%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
++G G++G V++A +K + A+K ++ S C +E+ LR++ HPN++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC---REIALLRELK-HPNVISL 83
Query: 67 QE--LASENYRLYFVFEYMDCNLHQLM-------SNRKQC-FSEAEVKNWCFQILQGLNY 116
Q+ L+ + +++ +F+Y + +L ++ +N+K VK+ +QIL G++Y
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 117 MHRQGYFHRDLISKNLLVSND-----TIKIADFGLAWEVDS-CPPYTE---YITTLQYRA 167
+H HRDL N+LV + +KIAD G A +S P + + T YRA
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCED---------DQLYKICNAIGS 218
PE+LL + Y +D+WA+G I AEL+T P+F ED DQL +I N +G
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGF 263
Query: 219 PTEESWAEGLELAKAHGYKFPKLQGN---NLSLL------IPSANDDEMSLIELLCSWDP 269
P ++ W E ++ H + N N SL+ + L++ L + DP
Sbjct: 264 PADKDW-EDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDP 322
Query: 270 CKRPTAAEALQHPLF 284
KR T+ +A+Q P F
Sbjct: 323 IKRITSEQAMQDPYF 337
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 33/306 (10%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+++Y +K IG G+ G V A VAIK L + + L K NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 61 PNIVKL------QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
NI+ L Q+ E +Y V E MD NL Q++ + +Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGI 139
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
++H G HRDL N++V +D T+KI DFGLA + + T YRAPE++L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGS----------PTEES 223
G Y VD+W++G IM E++ LFPG DQ K+ +G+ PT +
Sbjct: 200 MG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRN 258
Query: 224 WAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDE-------MSLIELLCSWDPCKRPTAA 276
+ E K GY F KL + +L P+ ++ L+ + D KR +
Sbjct: 259 YVEN--RPKYAGYSFEKLFPD---VLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 277 EALQHP 282
EALQHP
Sbjct: 314 EALQHP 319
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 160/319 (50%), Gaps = 45/319 (14%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRK--INN 59
+Y ++K IG+GSFG+V +A + ++VA+K ++ ++ + + ++ ++ LRK +N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMS-NRKQCFSEAEVKNWCFQILQGLNYMH 118
N++ + E + + FE + NL++L+ N+ Q FS V+ + ILQ L+ +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 119 RQGYFHRDLISKNLLV---SNDTIKIADFGLAWEVDSCPPYTEYITTLQ---YRAPEMLL 172
+ H DL +N+L+ IK+ DFG SC + T +Q YRAPE++L
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEE---------- 222
+Y +DMW+LG I+AEL+T +PL PG E DQL + +G P+++
Sbjct: 273 -GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKN 331
Query: 223 --------------SWAEGLELAKAHGYKFPKLQGNNLSLLIPSA---NDDEMSL--IEL 263
+ ++G + + KL+G S +A DD + L ++
Sbjct: 332 FVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQ 391
Query: 264 LCSWDPCKRPTAAEALQHP 282
WDP R T +AL+HP
Sbjct: 392 CLEWDPAVRMTPGQALRHP 410
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 45/328 (13%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRK--INN 59
+Y ++K IG+GSFG+V +A + ++VA+K ++ ++ + + ++ ++ LRK +N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMS-NRKQCFSEAEVKNWCFQILQGLNYMH 118
N++ + E + + FE + NL++L+ N+ Q FS V+ + ILQ L+ +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 119 RQGYFHRDLISKNLLV---SNDTIKIADFGLAWEVDSCPPYTEYITTLQ---YRAPEMLL 172
+ H DL +N+L+ IK+ DFG SC + T +Q YRAPE++L
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEE---------- 222
+Y +DMW+LG I+AEL+T +PL PG E DQL + +G P+++
Sbjct: 273 -GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKN 331
Query: 223 --------------SWAEGLELAKAHGYKFPKLQGNNLSLLIPSA---NDDEMSL--IEL 263
+ ++G + + KL+G S +A DD + L ++
Sbjct: 332 FVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQ 391
Query: 264 LCSWDPCKRPTAAEALQHPLFQGCLQVP 291
WDP R T +AL+HP + L P
Sbjct: 392 CLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 72/352 (20%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNH 60
+ Y + IG GS+G V+ A K + + VAIK + + +C L+E+ L ++ +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 61 PNIVKLQELA-SENY----RLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
I++L +L E+ LY V E D +L +L +E VK + +L G
Sbjct: 88 -YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEQHVKTILYNLLLGEK 145
Query: 116 YMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCP------------------PY 156
++H G HRDL N L++ D ++KI DFGLA ++S P+
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 157 --------TEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF-----------H 197
T ++ T YRAPE++L+ Y + +D+W+ G I AEL+
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRF 265
Query: 198 PLFPGT-----------------CEDDQLYKICNAIGSPTEESWA-----EGLELAKAHG 235
PLFPG+ DQL I N IG+P EE E ++ K
Sbjct: 266 PLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKL-- 323
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
FP G +LS S + + + L+E + ++ KR T +AL HP +
Sbjct: 324 --FPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDV 373
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 37/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Y +K++G G++G+V K +G AIK +K+ + L EV L++++
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD- 79
Query: 60 HPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI+KL E + Y V E Y L + R Q FSE + Q+L G Y+H
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-QKFSEVDAAVIMKQVLSGTTYLH 138
Query: 119 RQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
+ HRDL +NLL+ + + IKI DFGL+ + E + T Y APE+L
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--R 196
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+Y+ K D+W+ G+I+ L+ +P F G + + L ++ S W +
Sbjct: 197 KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ-------- 248
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
+D+ L++L+ +++P KR +A EAL HP
Sbjct: 249 ------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 36/290 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINNH 60
E+Y ++ +G+GSFG+V + + + + A+K + K + + L+EV+ L+K++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-H 80
Query: 61 PNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
PNI+KL E+ ++ Y V E Y L + RK+ FSE + Q+ G+ YMH+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHK 139
Query: 120 QGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N+L+ + IKI DFGL+ + I T Y APE+L G
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL--RG 197
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y+ K D+W+ G+I+ L++ P F G E D L ++ E K +
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV----------------ETGK-YA 240
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
+ P+ + + +DD LI + ++ P R TA + L+HP Q
Sbjct: 241 FDLPQWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 36/290 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINNH 60
E+Y ++ +G+GSFG+V + + + + A+K + K + + L+EV+ L+K++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-H 80
Query: 61 PNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
PNI+KL E+ ++ Y V E Y L + RK+ FSE + Q+ G+ YMH+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHK 139
Query: 120 QGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N+L+ + IKI DFGL+ + I T Y APE+L G
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL--RG 197
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y+ K D+W+ G+I+ L++ P F G E D L ++ E K +
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV----------------ETGK-YA 240
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
+ P+ + + +DD LI + ++ P R TA + L+HP Q
Sbjct: 241 FDLPQWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 37/300 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINNH 60
E+Y ++ +G+GSFG+V + + + + A+K + K + + L+EV+ L+K++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-H 80
Query: 61 PNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
PNI+KL E+ ++ Y V E Y L + RK+ FSE + Q+ G+ YMH+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHK 139
Query: 120 QGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N+L+ + IKI DFGL+ + I T Y APE+L G
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL--RG 197
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y+ K D+W+ G+I+ L++ P F G E D L ++ E K +
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV----------------ETGK-YA 240
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG-CLQVPSMS 294
+ P+ + + +DD LI + ++ P R TA + L+HP Q + P++S
Sbjct: 241 FDLPQWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTIS 291
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 36/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L +++G+G+F V + +K +G+ A K + + S + L+ + ++ HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHR 119
NIV+L + SE Y VF+ + +L + ++ +SEA+ + QIL+ +N+ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGG--ELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 120 QGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSC-PPYTEYITTLQYRAPEMLLMS 174
G HRDL +NLL+++ + +K+ADFGLA EV + + T Y +PE +L
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRK 180
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y VDMWA G+I+ L+ +P F D+ +++ I KA
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF----WDEDQHRLYQQI---------------KAG 221
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y FP + + ++ P A D LI + + +P KR TA+EAL+HP
Sbjct: 222 AYDFPSPEWDTVT---PEAKD----LINKMLTINPAKRITASEALKHP 262
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 36/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L +++G+G+F V + +K +G+ A K + + S + L+ + ++ HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHR 119
NIV+L + SE Y VF+ + +L + ++ +SEA+ + QIL+ +N+ H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGG--ELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 120 QGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSC-PPYTEYITTLQYRAPEMLLMS 174
G HRDL +NLL+++ + +K+ADFGLA EV + + T Y +PE +L
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VLRK 180
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y VDMWA G+I+ L+ +P F D+ +++ I KA
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPF----WDEDQHRLYQQI---------------KAG 221
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y FP + + ++ P A D LI + + +P KR TA+EAL+HP
Sbjct: 222 AYDFPSPEWDTVT---PEAKD----LINKMLTINPAKRITASEALKHP 262
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 45/307 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKIN 58
++Y + +G+GSFG+V K +G+ A+K + +R + +E L L+EV+ L++++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 84
Query: 59 NHPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNI+KL E + Y V E Y L + +RK+ FSE + Q+L G+ YM
Sbjct: 85 -HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYM 142
Query: 118 HRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
H+ HRDL +NLL+ + + I+I DFGL+ ++ + I T Y APE+L
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-- 200
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y+ K D+W+ G+I+ L++ P F G E D L K+ E K
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGK- 243
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG------C 287
Y F Q +S SA D LI + ++ P R +A +AL H Q
Sbjct: 244 --YTFELPQWKKVS---ESAKD----LIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 294
Query: 288 LQVPSMS 294
+ VPS+
Sbjct: 295 VDVPSLD 301
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 45/307 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKIN 58
++Y + +G+GSFG+V K +G+ A+K + +R + +E L L+EV+ L++++
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 107
Query: 59 NHPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNI+KL E + Y V E Y L + +RK+ FSE + Q+L G+ YM
Sbjct: 108 -HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYM 165
Query: 118 HRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
H+ HRDL +NLL+ + + I+I DFGL+ ++ + I T Y APE+L
Sbjct: 166 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-- 223
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y+ K D+W+ G+I+ L++ P F G E D L K+ E K
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGK- 266
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG------C 287
Y F Q +S SA D LI + ++ P R +A +AL H Q
Sbjct: 267 --YTFELPQWKKVS---ESAKD----LIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 317
Query: 288 LQVPSMS 294
+ VPS+
Sbjct: 318 VDVPSLD 324
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 45/307 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKIN 58
++Y + +G+GSFG+V K +G+ A+K + +R + +E L L+EV+ L++++
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 108
Query: 59 NHPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNI+KL E + Y V E Y L + +RK+ FSE + Q+L G+ YM
Sbjct: 109 -HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYM 166
Query: 118 HRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
H+ HRDL +NLL+ + + I+I DFGL+ ++ + I T Y APE+L
Sbjct: 167 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-- 224
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y+ K D+W+ G+I+ L++ P F G E D L K+ E K
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGK- 267
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG------C 287
Y F Q +S SA D LI + ++ P R +A +AL H Q
Sbjct: 268 --YTFELPQWKKVS---ESAKD----LIRKMLTYVPSMRISARDALDHEWIQTYTKEQIS 318
Query: 288 LQVPSMS 294
+ VPS+
Sbjct: 319 VDVPSLD 325
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 37/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Y +K++G G++G+V K +G AIK +K+ + L EV L++++
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD- 62
Query: 60 HPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI+KL E + Y V E Y L + R Q FSE + Q+L G Y+H
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-QKFSEVDAAVIMKQVLSGTTYLH 121
Query: 119 RQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
+ HRDL +NLL+ + + IKI DFGL+ + E + T Y APE+L
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--R 179
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+Y+ K D+W+ G+I+ L+ +P F G + + L ++ S W +
Sbjct: 180 KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ-------- 231
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
+D+ L++L+ +++P KR +A EAL HP
Sbjct: 232 ------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHP 261
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 146/292 (50%), Gaps = 39/292 (13%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKIN 58
++Y + +G+GSFG+V K +G+ A+K + +R + +E L L+EV+ L++++
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 90
Query: 59 NHPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNI+KL E + Y V E Y L + +RK+ FSE + Q+L G+ YM
Sbjct: 91 -HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYM 148
Query: 118 HRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
H+ HRDL +NLL+ + + I+I DFGL+ ++ + I T Y APE+L
Sbjct: 149 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL-- 206
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y+ K D+W+ G+I+ L++ P F G E D L K+ E K
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGK- 249
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
Y F Q +S SA D LI + ++ P R +A +AL H Q
Sbjct: 250 --YTFELPQWKKVS---ESAKD----LIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 160/328 (48%), Gaps = 45/328 (13%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRK--INN 59
+Y ++K IG+G FG+V +A + ++VA+K ++ ++ + + ++ ++ LRK +N
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMS-NRKQCFSEAEVKNWCFQILQGLNYMH 118
N++ + E + + FE + NL++L+ N+ Q FS V+ + ILQ L+ +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 119 RQGYFHRDLISKNLLV---SNDTIKIADFGLAWEVDSCPPYTEYITTLQ---YRAPEMLL 172
+ H DL +N+L+ IK+ DFG SC + +Q YRAPE++L
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-----SSCYEHQRVYXXIQSRFYRAPEVIL 272
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEE---------- 222
+Y +DMW+LG I+AEL+T +PL PG E DQL + +G P ++
Sbjct: 273 -GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKN 331
Query: 223 --------------SWAEGLELAKAHGYKFPKLQGNNLSLLIPSA---NDDEMSL--IEL 263
+ ++G + + KL+G S +A DD + L ++
Sbjct: 332 FVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQ 391
Query: 264 LCSWDPCKRPTAAEALQHPLFQGCLQVP 291
WDP R T +AL+HP + L P
Sbjct: 392 CLEWDPAVRMTPGQALRHPWLRRRLPKP 419
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 31/306 (10%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-- 58
M+++ + + G+G+FG V +K +G VAIK + Q + +E++ ++ +
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DPRFRNRELQIMQDLAVL 76
Query: 59 NHPNIVKLQE----LASENYR---LYFVFEYMDCNLHQLMSN---RKQCFSEAEVKNWCF 108
+HPNIV+LQ L + R L V EY+ LH+ N R+ +K + F
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 109 QILQGLNYMH--RQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQ 164
Q+++ + +H HRD+ N+LV ++ T+K+ DFG A ++ P YI +
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY 196
Query: 165 YRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESW 224
YRAPE++ + Y + VD+W++G I AE++ P+F G QL++I +G P+ E
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256
Query: 225 AE------GLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEA 278
+ ++L + G + + ++ A D L+ L + P +R EA
Sbjct: 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD----LLSALLQYLPEERMKPYEA 312
Query: 279 LQHPLF 284
L HP F
Sbjct: 313 LCHPYF 318
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 145/286 (50%), Gaps = 36/286 (12%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
Y L +++G+G+F V + +K +G+ A K + + S + L+ + ++ HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + SE Y +F+ + +L + ++ +SEA+ + QIL+ + + H+ G
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGG--ELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 122 YFHRDLISKNLLVSND----TIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL +NLL+++ +K+ADFGLA EV+ + + T Y +PE +L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRKDP 200
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
Y VD+WA G+I+ L+ +P F D+ +++ I KA Y
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPF----WDEDQHRLYQQI---------------KAGAY 241
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
FP + + ++ P A D LI + + +P KR TAAEAL+HP
Sbjct: 242 DFPSPEWDTVT---PEAKD----LINKMLTINPSKRITAAEALKHP 280
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
MEKY +++IGEGSFGK + G IK + R+ S E + +EV L +
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK- 81
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNIV+ +E EN LY V +Y + ++ + + F E ++ +W QI L ++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEY-ITTLQYRAPEMLLMSG 175
H + HRD+ S+N+ ++ D T+++ DFG+A ++S I T Y +PE + +
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE-ICENK 200
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPT 220
YN+K D+WALG ++ EL T F + + KI + P
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV 245
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 146/288 (50%), Gaps = 36/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E+Y L +++G+G+F V + +K +G+ A + + S + L+ + ++ HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHR 119
NIV+L + SE Y +F+ + +L + ++ +SEA+ + QIL+ + + H+
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGG--ELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 120 QGYFHRDLISKNLLVSND----TIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMS 174
G HR+L +NLL+++ +K+ADFGLA EV+ + + T Y +PE +L
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRK 187
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y VD+WA G+I+ L+ +P F D+ +++ I KA
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPF----WDEDQHRLYQQI---------------KAG 228
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y FP + + ++ P A D LI + + +P KR TAAEAL+HP
Sbjct: 229 AYDFPSPEWDTVT---PEAKD----LINKMLTINPSKRITAAEALKHP 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 148/307 (48%), Gaps = 45/307 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKIN 58
++Y + +G+GSFG+V K +G+ A+K + +R + +E L L+EV+ L++++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 84
Query: 59 NHPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNI KL E + Y V E Y L + +RK+ FSE + Q+L G+ Y
Sbjct: 85 -HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYX 142
Query: 118 HRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
H+ HRDL +NLL+ + + I+I DFGL+ ++ + I T Y APE+L
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL-- 200
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
G Y+ K D+W+ G+I+ L++ P F G E D L K+ E K
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGK- 243
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG------C 287
Y F Q +S SA D LI ++ P R +A +AL H Q
Sbjct: 244 --YTFELPQWKKVS---ESAKD----LIRKXLTYVPSXRISARDALDHEWIQTYTKEQIS 294
Query: 288 LQVPSMS 294
+ VPS+
Sbjct: 295 VDVPSLD 301
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 152/307 (49%), Gaps = 33/307 (10%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK ++ +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK----PVKKNKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAE--GLEL--- 230
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + + +EL
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 231 --------AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
++ +F + N L+ P A + ++ L +D R TA EA++HP
Sbjct: 269 FNDILGRHSRKRWERF--VHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 283 LFQGCLQ 289
F ++
Sbjct: 323 YFYTVVK 329
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 144/288 (50%), Gaps = 36/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L +++G+G+F V + +KK + A K + + S + L+ + ++ HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHR 119
NIV+L + SE Y VF+ + +L + ++ +SEA+ + QIL+ +N++H+
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGG--ELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 120 QGYFHRDLISKNLLVSND----TIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMS 174
HRDL +NLL+++ +K+ADFGLA EV + + T Y +PE +L
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE-VLRK 207
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y VD+WA G+I+ L+ +P F D+ +K+ I KA
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPF----WDEDQHKLYQQI---------------KAG 248
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y FP + + ++ P A + LI + + +P KR TA +AL+HP
Sbjct: 249 AYDFPSPEWDTVT---PEAKN----LINQMLTINPAKRITADQALKHP 289
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 37/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNH 60
+ Y + +++G+G+F V + + K +G A K + + S + L +E + RK+ H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-H 64
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMH 118
PNIV+L + E Y VF+ + +L + ++ +SEA+ + QIL+ + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 119 RQGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
G HR+L +NLL+++ +K+ADFGLA EV+ + + T Y +PE+ L
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKK 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y+ VD+WA G+I+ L+ +P F D+ +++ I KA
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQI---------------KAG 222
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y +P + + ++ P A SLI+ + + +P KR TA +AL+ P
Sbjct: 223 AYDYPSPEWDTVT---PEAK----SLIDSMLTVNPKKRITADQALKVP 263
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 37/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNH 60
+ Y + +++G+G+F V + + K +G A K + + S + L +E + RK+ H
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-H 64
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMH 118
PNIV+L + E Y VF+ + +L + ++ +SEA+ + QIL+ + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 119 RQGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
G HR+L +NLL+++ +K+ADFGLA EV+ + + T Y +PE+ L
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKK 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y+ VD+WA G+I+ L+ +P F D+ +++ I KA
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQI---------------KAG 222
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y +P + + ++ P A SLI+ + + +P KR TA +AL+ P
Sbjct: 223 AYDYPSPEWDTVT---PEAK----SLIDSMLTVNPKKRITADQALKVP 263
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 37/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNH 60
+ Y + +++G+G+F V + + K +G A K + + S + L +E + RK+ H
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-H 63
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMH 118
PNIV+L + E Y VF+ + +L + ++ +SEA+ + QIL+ + Y H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 119 RQGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
G HR+L +NLL+++ +K+ADFGLA EV+ + + T Y +PE+ L
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV-LKK 180
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y+ VD+WA G+I+ L+ +P F D+ +++ I KA
Sbjct: 181 DPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQI---------------KAG 221
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y +P + + ++ P A SLI+ + + +P KR TA +AL+ P
Sbjct: 222 AYDYPSPEWDTVT---PEAK----SLIDSMLTVNPKKRITADQALKVP 262
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 36/297 (12%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+GEG++ KV A+ Q+G+ A+K + KQ +S +EV+ L + + NI++L E
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF--REVETLYQCQGNKNILELIE 78
Query: 69 LASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLI 128
++ R Y VFE + +++ F+E E + L+++H +G HRDL
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLK 138
Query: 129 SKNLLVSN----DTIKIADFGLAWEV---DSCPPYT--EYIT---TLQYRAPEML-LMSG 175
+N+L + +KI DF L + +SC P T E T + +Y APE++ + +
Sbjct: 139 PENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTD 198
Query: 176 Q---YNSKVDMWALGLIMAELITFHPLFPGTCEDD---QLYKICNAIGSPTEESWAEGLE 229
Q Y+ + D+W+LG+++ +++ +P F G C D ++C + ES EG
Sbjct: 199 QATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG-- 256
Query: 230 LAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG 286
Y+FP ++S + LI L D +R +AA+ LQHP QG
Sbjct: 257 -----KYEFPDKDWAHIS-------SEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 37/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNH 60
+ Y + +++G+G+F V + + K +G A K + + S + L +E + RK+ H
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-H 87
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMH 118
PNIV+L + E Y VF+ + +L + ++ +SEA+ + QIL+ + Y H
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 119 RQGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
G HR+L +NLL+++ +K+ADFGLA EV+ + + T Y +PE +L
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE-VLKK 204
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y+ VD+WA G+I+ L+ +P F D+ +++ I KA
Sbjct: 205 DPYSKPVDIWACGVILYILLVGYPPF----WDEDQHRLYAQI---------------KAG 245
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y +P + + ++ P A SLI+ + + +P KR TA +AL+ P
Sbjct: 246 AYDYPSPEWDTVT---PEAK----SLIDSMLTVNPKKRITADQALKVP 286
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 34/286 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E Y +K++G G++G+V K + AIK +++ S L E + K+ +HP
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 62 NIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI+KL + + Y V E Y L + +R + F+E + Q+L G+ Y+H+
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHKH 155
Query: 121 GYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL +NLL+ + IKI DFGL+ ++ E + T Y APE+L +
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL--RKK 213
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
Y+ K D+W++G+I+ L+ +P F G + + L K+ E K Y
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV----------------EKGK---Y 254
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
F + N+S A D LI+ + +D +R +A +AL+HP
Sbjct: 255 TFDSPEWKNVS---EGAKD----LIKQMLQFDSQRRISAQQALEHP 293
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 36/288 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L + IG+G+F V + +K +G A K + + S + L+ + ++ H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHR 119
NIV+L + SE Y VF+ + +L + ++ +SEA+ + QIL+ + + H+
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGG--ELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 120 QGYFHRDLISKNLLVSND----TIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMS 174
G HRDL +NLL+++ +K+ADFGLA EV + + T Y +PE+L
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
Y VD+WA G+I+ L+ +P F D+ +K+ I KA
Sbjct: 182 A-YGKPVDIWACGVILYILLVGYPPF----WDEDQHKLYQQI---------------KAG 221
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
Y FP + + ++ P A + LI + + +P KR TA EAL+HP
Sbjct: 222 AYDFPSPEWDTVT---PEAKN----LINQMLTINPAKRITAHEALKHP 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL----KQRIYSWEECLNLKEVKCLRKINN 59
++ +++IG GSFG V+ A ++ E VAIK + KQ W++ + KEV+ L+K+
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLR- 112
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPN ++ + + + V EY + L+ K+ E E+ LQGL Y+H
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 120 QGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM--SGQ 176
HRD+ + N+L+S +K+ DFG A P ++ T + APE++L GQ
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQ 229
Query: 177 YNSKVDMWALGLIMAELITFHP 198
Y+ KVD+W+LG+ EL P
Sbjct: 230 YDGKVDVWSLGITCIELAERKP 251
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 16/232 (6%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL----KQRIYSWEECLNLKEVKCLRKINN 59
++ +++IG GSFG V+ A ++ E VAIK + KQ W++ + KEV+ L+K+
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII--KEVRFLQKLR- 73
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPN ++ + + + V EY + L+ K+ E E+ LQGL Y+H
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 120 QGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM--SGQ 176
HRD+ + N+L+S +K+ DFG A P ++ T + APE++L GQ
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEES--WAE 226
Y+ KVD+W+LG+ EL P LY I SP +S W+E
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSE 241
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 147/300 (49%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 107
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 164
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 165 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 224
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ ++
Sbjct: 225 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQL 284
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 285 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 340
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 121/232 (52%), Gaps = 11/232 (4%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
+E + L K +G+GSFGKV+ A K++ ++ AIKALK+ + ++ + + E + L
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQC--FSEAEVKNWCFQILQGLNY 116
HP + + L+FV EY+ N LM + + C F + + +I+ GL +
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYL--NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMS 174
+H +G +RDL N+L+ D IKIADFG+ E + E+ T Y APE+LL
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL-G 193
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE 226
+YN VD W+ G+++ E++ F G E++ + I + +P W E
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLE 243
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 86
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 87
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 144
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 204
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 205 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 265 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 320
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 137/326 (42%), Gaps = 36/326 (11%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
Y +G G+F +V A K++ + VAIK + ++ +E E+ L KI HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
V L ++ LY + + + K ++E + FQ+L + Y+H G
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 124 HRDLISKNLLV----SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +NLL + I I+DFGL+ D + T Y APE+L Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSK 197
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
VD W++G+I L+ +P F +E+ A+ E Y+F
Sbjct: 198 AVDCWSIGVIAYILLCGYPPF-------------------YDENDAKLFEQILKAEYEFD 238
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
+++S D I L DP KR T +ALQHP G + S
Sbjct: 239 SPYWDDIS-------DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVS 291
Query: 300 MRLTPSAKKSGWK----AKLIVWFLR 321
++ + KS WK A +V +R
Sbjct: 292 EQIKKNFAKSKWKQAFNATAVVRHMR 317
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 86
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLXGGP 86
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 138/298 (46%), Gaps = 51/298 (17%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS--------------WEECLN 47
E Y ++++G G++G+V +K AIK +K+ + EE N
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 48 LKEVKCLRKINNHPNIVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNW 106
E+ L+ ++ HPNI+KL ++ + Y V E Y L + + NR + F E + N
Sbjct: 96 --EISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANI 151
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND----TIKIADFGLAWEVDSCPPYTEYITT 162
QIL G+ Y+H+ HRD+ +N+L+ N IKI DFGL+ + + T
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGT 211
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEE 222
Y APE+L +YN K D+W+ G+IM L+ +P F G + D + K+
Sbjct: 212 AYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV---------- 259
Query: 223 SWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQ 280
E K Y F N+S D+ LI+L+ ++D KR TA EAL
Sbjct: 260 ------EKGK---YYFDFNDWKNIS-------DEAKELIKLMLTYDYNKRCTAEEALN 301
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS------WEECLNLK-EVKCL 54
++Y + K +G G+ G+V A ++++ + VAIK + +R ++ + LN++ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKINNHPNIVKLQEL-ASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQIL 111
+K+N HP I+K++ +E+Y Y V E M+ +++ N++ EA K + +Q+L
Sbjct: 70 KKLN-HPCIIKIKNFFDAEDY--YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 124
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ Y+H G HRDL +N+L+S+ IKI DFG + + T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 168 PEMLLMSGQ--YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLY-KICNAIGSPTEESW 224
PE+L+ G YN VD W+LG+I+ ++ +P F L +I + + E W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
AE E A + L++ L DP R T EAL+HP
Sbjct: 245 AEVSEKA--------------------------LDLVKKLLVVDPKARFTTEEALRHPWL 278
Query: 285 Q 285
Q
Sbjct: 279 Q 279
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLMGGP 86
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS------WEECLNLK-EVKCL 54
++Y + K +G G+ G+V A ++++ + VAIK + +R ++ + LN++ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKINNHPNIVKLQEL-ASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQIL 111
+K+N HP I+K++ +E+Y Y V E M+ +++ N++ EA K + +Q+L
Sbjct: 70 KKLN-HPCIIKIKNFFDAEDY--YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 124
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ Y+H G HRDL +N+L+S+ IKI DFG + + T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 168 PEMLLMSGQ--YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLY-KICNAIGSPTEESW 224
PE+L+ G YN VD W+LG+I+ ++ +P F L +I + + E W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
AE E A + L++ L DP R T EAL+HP
Sbjct: 245 AEVSEKA--------------------------LDLVKKLLVVDPKARFTTEEALRHPWL 278
Query: 285 Q 285
Q
Sbjct: 279 Q 279
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQ 67
K +GEGSF + + K+S + A+K + +R+ E KE+ L+ HPNIVKL
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCEGHPNIVKLH 72
Query: 68 ELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
E+ + + V E ++ +K+ FSE E +++ +++MH G HRDL
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 128 ISKNLLVSNDT----IKIADFGLA-WEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSKVD 182
+NLL +++ IKI DFG A + P TL Y APE+L +G Y+ D
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG-YDESCD 191
Query: 183 MWALGLIMAELIT 195
+W+LG+I+ +++
Sbjct: 192 LWSLGVILYTMLS 204
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS------WEECLNLK-EVKCL 54
++Y + K +G G+ G+V A ++++ + VAIK + +R ++ + LN++ E++ L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 55 RKINNHPNIVKLQEL-ASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQIL 111
+K+N HP I+K++ +E+Y Y V E M+ +++ N++ EA K + +Q+L
Sbjct: 69 KKLN-HPCIIKIKNFFDAEDY--YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 123
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ Y+H G HRDL +N+L+S+ IKI DFG + + T Y A
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 168 PEMLLMSGQ--YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLY-KICNAIGSPTEESW 224
PE+L+ G YN VD W+LG+I+ ++ +P F L +I + + E W
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
AE E A + L++ L DP R T EAL+HP
Sbjct: 244 AEVSEKA--------------------------LDLVKKLLVVDPKARFTTEEALRHPWL 277
Query: 285 Q 285
Q
Sbjct: 278 Q 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS------WEECLNLK-EVKCL 54
++Y + K +G G+ G+V A ++++ + VAIK + +R ++ + LN++ E++ L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 55 RKINNHPNIVKLQEL-ASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQIL 111
+K+N HP I+K++ +E+Y Y V E M+ +++ N++ EA K + +Q+L
Sbjct: 76 KKLN-HPCIIKIKNFFDAEDY--YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 130
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ Y+H G HRDL +N+L+S+ IKI DFG + + T Y A
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 168 PEMLLMSGQ--YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLY-KICNAIGSPTEESW 224
PE+L+ G YN VD W+LG+I+ ++ +P F L +I + + E W
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
AE E A + L++ L DP R T EAL+HP
Sbjct: 251 AEVSEKA--------------------------LDLVKKLLVVDPKARFTTEEALRHPWL 284
Query: 285 Q 285
Q
Sbjct: 285 Q 285
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 5/218 (2%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
++ + ++ +G+GSFGKV A K++G+ A+K LK+ + ++ + + E + L
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP + +L RL+FV E+++ + + F EA + + +I+ L ++H
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+G +RDL N+L+ ++ K+ADFG+ E + + + T Y APE +L
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-ILQEML 200
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
Y VD WA+G+++ E++ H F EDD I N
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS------WEECLNLK-EVKCL 54
++Y + K +G G+ G+V A ++++ + VAIK + +R ++ + LN++ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKINNHPNIVKLQEL-ASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQIL 111
+K+N HP I+K++ +E+Y Y V E M+ +++ N++ EA K + +Q+L
Sbjct: 70 KKLN-HPCIIKIKNFFDAEDY--YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 124
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ Y+H G HRDL +N+L+S+ IKI DFG + + T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 168 PEMLLMSGQ--YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLY-KICNAIGSPTEESW 224
PE+L+ G YN VD W+LG+I+ ++ +P F L +I + + E W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
AE E A + L++ L DP R T EAL+HP
Sbjct: 245 AEVSEKA--------------------------LDLVKKLLVVDPKARFTTEEALRHPWL 278
Query: 285 Q 285
Q
Sbjct: 279 Q 279
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 131/313 (41%), Gaps = 32/313 (10%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
Y +G G+F +V A K++ + VAIK + + +E E+ L KI HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
V L ++ LY + + + K ++E + FQ+L + Y+H G
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 124 HRDLISKNLLV----SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +NLL + I I+DFGL+ D + T Y APE+L Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSK 197
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
VD W++G+I L+ +P F +E+ A+ E Y+F
Sbjct: 198 AVDCWSIGVIAYILLCGYPPF-------------------YDENDAKLFEQILKAEYEFD 238
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
+++S D I L DP KR T +ALQHP G + S
Sbjct: 239 SPYWDDIS-------DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVS 291
Query: 300 MRLTPSAKKSGWK 312
++ + KS WK
Sbjct: 292 EQIKKNFAKSKWK 304
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 136/326 (41%), Gaps = 36/326 (11%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
Y +G G+F +V A K++ + VAIK + + +E E+ L KI HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
V L ++ LY + + + K ++E + FQ+L + Y+H G
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 124 HRDLISKNLLV----SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +NLL + I I+DFGL+ D + T Y APE+L Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSK 197
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
VD W++G+I L+ +P F +E+ A+ E Y+F
Sbjct: 198 AVDCWSIGVIAYILLCGYPPF-------------------YDENDAKLFEQILKAEYEFD 238
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
+++S D I L DP KR T +ALQHP G + S
Sbjct: 239 SPYWDDIS-------DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVS 291
Query: 300 MRLTPSAKKSGWK----AKLIVWFLR 321
++ + KS WK A +V +R
Sbjct: 292 EQIKKNFAKSKWKQAFNATAVVRHMR 317
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 86
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 120/232 (51%), Gaps = 11/232 (4%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
+E + L K +G+GSFGKV+ A K++ ++ AIKALK+ + ++ + + E + L
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQC--FSEAEVKNWCFQILQGLNY 116
HP + + L+FV EY+ N LM + + C F + + +I+ GL +
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYL--NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE-YITTLQYRAPEMLLMS 174
+H +G +RDL N+L+ D IKIADFG+ E T + T Y APE+LL
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL-G 192
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAE 226
+YN VD W+ G+++ E++ F G E++ + I + +P W E
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLE 242
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 87
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 144
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 204
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 205 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 265 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 320
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 86
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 143
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 203
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 204 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 319
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 45/293 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSW---EECLNLKEVKCLRK 56
+E + + +G+GSF V++A +G VAIK + K+ +Y + N ++ C K
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 57 INNHPNIVKLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
HP+I++L ++ +Y V E + +++ + NR + FSE E +++ QI+ G+
Sbjct: 70 ---HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML 126
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEML 171
Y+H G HRDL NLL++ N IKIADFGLA ++ P+ ++ T T Y +PE+
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM--PHEKHYTLCGTPNYISPEIA 184
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
S + + D+W+LG + L+ P F + L K+ A
Sbjct: 185 TRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA---------------- 227
Query: 232 KAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
Y+ P S L A D LI L +P R + + L HP
Sbjct: 228 ---DYEMP-------SFLSIEAKD----LIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 146/300 (48%), Gaps = 27/300 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y +++++G G + +V++ I + E K + + + ++ +E+K L+ + P
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLCGGP 88
Query: 62 NIVKLQELASENYRLY--FVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIVKL ++ + + +FEY++ +++ ++ +++ + +++L+ L+Y H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHS 145
Query: 120 QGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
QG HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+ Y
Sbjct: 146 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDY 205
Query: 178 NSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------- 229
+ +DMW+LG + A +I P F G DQL KI +G+ +
Sbjct: 206 DYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 265
Query: 230 --LAKAHGYK--FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
L H K + +N L+ P A D ++ L +D +R TA EA+ HP FQ
Sbjct: 266 EALVGRHSRKPWLKFMNADNQHLVSPEAID----FLDKLLRYDHQERLTALEAMTHPYFQ 321
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G VAIK + + + L +EV+ + KI NHPN
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIM-KILNHPN 72
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY + EY L+++ + E E ++ QI+ + Y H++
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQK 130
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + + Y APE+
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFDG 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS------WEECLNLK-EVKCL 54
++Y + K +G G+ G+V A ++++ + VAI+ + +R ++ + LN++ E++ L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 55 RKINNHPNIVKLQEL-ASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQIL 111
+K+N HP I+K++ +E+Y Y V E M+ +++ N++ EA K + +Q+L
Sbjct: 209 KKLN-HPCIIKIKNFFDAEDY--YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 263
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ Y+H G HRDL +N+L+S+ IKI DFG + + T Y A
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323
Query: 168 PEMLLMSGQ--YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLY-KICNAIGSPTEESW 224
PE+L+ G YN VD W+LG+I+ ++ +P F L +I + + E W
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 383
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
AE E A + L++ L DP R T EAL+HP
Sbjct: 384 AEVSEKA--------------------------LDLVKKLLVVDPKARFTTEEALRHPWL 417
Query: 285 Q 285
Q
Sbjct: 418 Q 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 48/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS------WEECLNLK-EVKCL 54
++Y + K +G G+ G+V A ++++ + VAI+ + +R ++ + LN++ E++ L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 55 RKINNHPNIVKLQEL-ASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQIL 111
+K+N HP I+K++ +E+Y Y V E M+ +++ N++ EA K + +Q+L
Sbjct: 195 KKLN-HPCIIKIKNFFDAEDY--YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 249
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ Y+H G HRDL +N+L+S+ IKI DFG + + T Y A
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309
Query: 168 PEMLLMSGQ--YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLY-KICNAIGSPTEESW 224
PE+L+ G YN VD W+LG+I+ ++ +P F L +I + + E W
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
AE E A + L++ L DP R T EAL+HP
Sbjct: 370 AEVSEKA--------------------------LDLVKKLLVVDPKARFTTEEALRHPWL 403
Query: 285 Q 285
Q
Sbjct: 404 Q 404
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G+ VA++ + + + L +EV+ + K+ NHPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIM-KVLNHPN 74
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ + E E + QI+ + Y H++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E E+ + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 150/305 (49%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E VA+K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+L+ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 285 QGCLQ 289
++
Sbjct: 325 YTVVK 329
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G VAIK + + + L +EV+ + KI NHPN
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIM-KILNHPN 75
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY + EY L+++ + E E ++ QI+ + Y H++
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQK 133
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + Y APE+
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDG 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 127/302 (42%), Gaps = 48/302 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR---IYSWEEC-----LNLKEVKC 53
E Y + +G G V + I K + + A+K + +S EE LKEV
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 54 LRKINNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQG 113
LRK++ HPNI++L++ N + VF+ M K SE E + +L+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 114 LNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ +H+ HRDL +N+L+ +D IK+ DFG + ++D E T Y APE++
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE 183
Query: 173 MSGQ-----YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEG 227
S Y +VDMW+ G+IM L+ P F W
Sbjct: 184 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-----------------------WHRK 220
Query: 228 ----LELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPL 283
L + + Y+F + ++ S D L+ P KR TA EAL HP
Sbjct: 221 QMLMLRMIMSGNYQFGSPEWDDYS-------DTVKDLVSRFLVVQPQKRYTAEEALAHPF 273
Query: 284 FQ 285
FQ
Sbjct: 274 FQ 275
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 116/222 (52%), Gaps = 7/222 (3%)
Query: 4 YTLMKQIGEGSFGKVW---QAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+ L+K +G+GSFGKV+ + + SG A+K LK+ + + K + + NH
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
P +VKL +LY + +++ +++ F+E +VK + ++ GL+++H
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 121 GYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
G +RDL +N+L+ + IK+ DFGL+ E +D + T++Y APE++ G +
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA-IGSP 219
S D W+ G++M E++T F G + + I A +G P
Sbjct: 210 S-ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 127/302 (42%), Gaps = 48/302 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR---IYSWEEC-----LNLKEVKC 53
E Y + +G G V + I K + + A+K + +S EE LKEV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 54 LRKINNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQG 113
LRK++ HPNI++L++ N + VF+ M K SE E + +L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 114 LNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ +H+ HRDL +N+L+ +D IK+ DFG + ++D E T Y APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE 196
Query: 173 MSGQ-----YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEG 227
S Y +VDMW+ G+IM L+ P F W
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-----------------------WHRK 233
Query: 228 ----LELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPL 283
L + + Y+F + ++ S D L+ P KR TA EAL HP
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYS-------DTVKDLVSRFLVVQPQKRYTAEEALAHPF 286
Query: 284 FQ 285
FQ
Sbjct: 287 FQ 288
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A + SG+ VA+K + R E L EV +R H N+V++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQ-HENVVEMYN 84
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ V E+++ L ++++ + +E ++ C +LQ L+ +H QG HRD+
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 142
Query: 128 ISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQY-RAPEMLLMSGQYNSKVDMWA 185
S ++L+++D +K++DFG +V P + + Y APE L+ Y +VD+W+
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 201
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E++ P + E + +++ + + P+L+ N
Sbjct: 202 LGIMVIEMVDGEPPY-------------------FNEPPLKAMKMIRDN--LPPRLK--N 238
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + PS ++ L DP +R TAAE L+HP
Sbjct: 239 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A + SG+ VA+K + R E L EV +R H N+V++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQ-HENVVEMYN 88
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ V E+++ L ++++ + +E ++ C +LQ L+ +H QG HRD+
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 146
Query: 128 ISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQY-RAPEMLLMSGQYNSKVDMWA 185
S ++L+++D +K++DFG +V P + + Y APE L+ Y +VD+W+
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 205
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E++ P + E + +++ + + P+L+ N
Sbjct: 206 LGIMVIEMVDGEPPY-------------------FNEPPLKAMKMIRDN--LPPRLK--N 242
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + PS ++ L DP +R TAAE L+HP
Sbjct: 243 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A + SG+ VA+K + R E L EV +R H N+V++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQ-HENVVEMYN 93
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ V E+++ L ++++ + +E ++ C +LQ L+ +H QG HRD+
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 151
Query: 128 ISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQY-RAPEMLLMSGQYNSKVDMWA 185
S ++L+++D +K++DFG +V P + + Y APE L+ Y +VD+W+
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 210
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E++ P + E + +++ + + P+L+ N
Sbjct: 211 LGIMVIEMVDGEPPY-------------------FNEPPLKAMKMIRDN--LPPRLK--N 247
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + PS ++ L DP +R TAAE L+HP
Sbjct: 248 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G+ VA+K + + + L +EV+ + K+ NHPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM-KVLNHPN 74
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ + E E + QI+ + Y H++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K IG GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EYM R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ IK+ADFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K IG GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EYM R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ IK+ADFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A + SG+ VA+K + R E L EV +R H N+V++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQ-HENVVEMYN 95
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ V E+++ L ++++ + +E ++ C +LQ L+ +H QG HRD+
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 153
Query: 128 ISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQY-RAPEMLLMSGQYNSKVDMWA 185
S ++L+++D +K++DFG +V P + + Y APE L+ Y +VD+W+
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 212
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E++ P + E + +++ + + P+L+ N
Sbjct: 213 LGIMVIEMVDGEPPY-------------------FNEPPLKAMKMIRDN--LPPRLK--N 249
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + PS ++ L DP +R TAAE L+HP
Sbjct: 250 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G+ VA+K + + + L +EV+ + K+ NHPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM-KVLNHPN 74
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ + E E + QI+ + Y H++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ ++ +G GSFG+V K++G + A+K L KQ++ ++ + K +++ N
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ IK+ADFG A V C T +Y APE++L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 213
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 214 KG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 103/203 (50%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L K IG+G+F KV A +G VA+K + + + L +EV+ + KI NHPN
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIM-KILNHPN 75
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ + E E + QI+ + Y H++
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 133
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + + Y APE+
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP 193
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDG 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A + SG+ VA+K + R E L EV +R H N+V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQ-HENVVEMYN 138
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ V E+++ L ++++ + +E ++ C +LQ L+ +H QG HRD+
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 196
Query: 128 ISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQY-RAPEMLLMSGQYNSKVDMWA 185
S ++L+++D +K++DFG +V P + + Y APE L+ Y +VD+W+
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 255
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E++ P + E + +++ + + P+L+ N
Sbjct: 256 LGIMVIEMVDGEPPY-------------------FNEPPLKAMKMIRDN--LPPRLK--N 292
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + PS ++ L DP +R TAAE L+HP
Sbjct: 293 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 122/287 (42%), Gaps = 32/287 (11%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
Y +G G+F +V A K++ + VAIK + + +E E+ L KI HPNI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
V L ++ LY + + + K ++E + FQ+L + Y+H G
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 124 HRDLISKNLLV----SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +NLL + I I+DFGL+ D + T Y APE+L Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK-PYSK 197
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
VD W++G+I L+ +P F +E+ A+ E Y+F
Sbjct: 198 AVDCWSIGVIAYILLCGYPPF-------------------YDENDAKLFEQILKAEYEFD 238
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG 286
+++S D I L DP KR T +ALQHP G
Sbjct: 239 SPYWDDIS-------DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G+ VA+K + + + L +EV+ + K+ NHPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM-KVLNHPN 74
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ + E E + QI+ + Y H++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 40/291 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINN---H 60
Y L + IG+G+F V + I +++G+ A+K + ++ L+ +++K I + H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61 PNIVKLQELASENYRLYFVFEYMD----CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
P+IV+L E S + LY VFE+MD C ++ +SEA ++ QIL+ L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 117 MHRQGYFHRDLISKNLLVSNDT----IKIADFGLAWEV-DSCPPYTEYITTLQYRAPEML 171
H HRD+ +N+L+++ +K+ DFG+A ++ +S + T + APE++
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
Y VD+W G+I+ L++ F G T+E EG+
Sbjct: 206 KRE-PYGKPVDVWGCGVILFILLSGCLPFYG-----------------TKERLFEGIIKG 247
Query: 232 KAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
K YK Q +++S SA D L+ + DP +R T EAL HP
Sbjct: 248 K---YKMNPRQWSHIS---ESAKD----LVRRMLMLDPAERITVYEALNHP 288
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G+ VA++ + + + L +EV+ + K+ NHPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIM-KVLNHPN 74
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ + E E + QI+ + Y H++
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQK 132
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDG 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 7/203 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 119
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
+RDL +NLL+ I++ DFG A V T +Y APE++L G Y
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLAPEIILSKG-Y 236
Query: 178 NSKVDMWALGLIMAELITFHPLF 200
N VD WALG+++ E+ +P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 145/304 (47%), Gaps = 35/304 (11%)
Query: 4 YTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
Y L + + GEG+ +V I + + A+K ++++ + +EV+ L + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRN 72
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+++L E E R Y VFE M ++++ F+E E + L+++H +G
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 123 FHRDLISKNLLVSN----DTIKIADFGLAWEV---DSCPPYT--EYIT---TLQYRAPEM 170
HRDL +N+L + +KI DFGL + C P + E +T + +Y APE+
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 171 LLMSGQ----YNSKVDMWALGLIMAELITFHPLFPGTCEDD---QLYKICNAIGSPTEES 223
+ + Y+ + D+W+LG+I+ L++ +P F G C D + C A + ES
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 224 WAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPL 283
EG Y+FP ++S +A D LI L D +R +AA+ LQHP
Sbjct: 253 IQEG-------KYEFPDKDWAHISC---AAKD----LISKLLVRDAKQRLSAAQVLQHPW 298
Query: 284 FQGC 287
QGC
Sbjct: 299 VQGC 302
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 126/302 (41%), Gaps = 48/302 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR---IYSWEEC-----LNLKEVKC 53
E Y + +G G V + I K + + A+K + +S EE LKEV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 54 LRKINNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQG 113
LRK++ HPNI++L++ N + VF+ M K SE E + +L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 114 LNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ +H+ HRDL +N+L+ +D IK+ DFG + ++D T Y APE++
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIE 196
Query: 173 MSGQ-----YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEG 227
S Y +VDMW+ G+IM L+ P F W
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-----------------------WHRK 233
Query: 228 ----LELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPL 283
L + + Y+F + ++ S D L+ P KR TA EAL HP
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYS-------DTVKDLVSRFLVVQPQKRYTAEEALAHPF 286
Query: 284 FQ 285
FQ
Sbjct: 287 FQ 288
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 11/219 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
+ + + +G+GSFGKV A +K + E AIK LK+ + ++ + + E + L ++
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQC--FSEAEVKNWCFQILQGLNY 116
P + +L RLYFV EY+ N LM + +Q F E + + +I GL +
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYV--NGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWE--VDSCPPYTEYITTLQYRAPEMLLM 173
+H++G +RDL N+++ ++ IKIADFG+ E +D E+ T Y APE++
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT-TREFCGTPDYIAPEIIAY 194
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKI 212
Y VD WA G+++ E++ P F G ED+ I
Sbjct: 195 Q-PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 39/305 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E + + + + ++ +EVK L +
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNE----RVVVKILKPVKKKKIKREVKILENLRGGT 98
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+KL + + + VFEY++ + QL Q ++ +++ + +++L+ L+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCH 154
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+G HRD+ N+++ + +++ D+GLA Y + + ++ PE+L+
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y+ +DMW+LG ++A +I P F G DQL +I +G TEE + L K H
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYG---YLKKYHI 269
Query: 236 YKFPK----------------LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEAL 279
P + N L+ P A + L++ L +D +R TA EA+
Sbjct: 270 DLDPHFNDILGQHSRKRWENFIHSENRHLVSPEA----LDLLDKLLRYDHQQRLTAKEAM 325
Query: 280 QHPLF 284
+HP F
Sbjct: 326 EHPYF 330
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 35/280 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A +K +G+ VA+K + R E L EV +R + H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL-FNEVVIMRDYH-HDNVVDMYS 109
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ V E+++ L ++++ + +E ++ C +L+ L+Y+H QG HRD+
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLHNQGVIHRDI 167
Query: 128 ISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSGQYNSKVDMWA 185
S ++L+++D IK++DFG +V P + T + APE ++ Y ++VD+W+
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE-VISRLPYGTEVDIWS 226
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E+I P + + +I +++ + +L K L+G
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVK-------DLHKVSSV----LRG-- 273
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
++L+ +P +R TA E L HP +
Sbjct: 274 --------------FLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A + SG+ VA+K + R E L EV +R H N+V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQ-HENVVEMYN 215
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ V E+++ L ++++ + +E ++ C +LQ L+ +H QG HRD+
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 273
Query: 128 ISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQY-RAPEMLLMSGQYNSKVDMWA 185
S ++L+++D +K++DFG +V P + + Y APE L+ Y +VD+W+
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 332
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E++ P + E + +++ + + P+L+ N
Sbjct: 333 LGIMVIEMVDGEPPY-------------------FNEPPLKAMKMIRDN--LPPRLK--N 369
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + PS ++ L DP +R TAAE L+HP
Sbjct: 370 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 39/305 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E + + + + ++ +EVK L +
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNE----RVVVKILKPVKKKKIKREVKILENLRGGT 93
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+KL + + + VFEY++ + QL Q ++ +++ + +++L+ L+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYELLKALDYCH 149
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+G HRD+ N+++ + +++ D+GLA Y + + ++ PE+L+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y+ +DMW+LG ++A +I P F G DQL +I +G TEE + L K H
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYG---YLKKYHI 264
Query: 236 YKFPK----------------LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEAL 279
P + N L+ P A + L++ L +D +R TA EA+
Sbjct: 265 DLDPHFNDILGQHSRKRWENFIHSENRHLVSPEA----LDLLDKLLRYDHQQRLTAKEAM 320
Query: 280 QHPLF 284
+HP F
Sbjct: 321 EHPYF 325
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 145/324 (44%), Gaps = 52/324 (16%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E +T +++IG+GSFG+V++ I ++ + VAIK + E +E+ L + ++
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS- 81
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+ K + +L+ + EY+ L R F E ++ +IL+GL+Y+H +
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGG-SALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRD+ + N+L+S +K+ADFG+A ++ D+ ++ T + APE++ S Y+S
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA-YDS 199
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
K D+W+LG+ EL A G P L + P
Sbjct: 200 KADIWSLGITAIEL---------------------AKGEPPNSDMHPMRVL-----FLIP 233
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
K NN L+ I+ + DP RPTA E L+H
Sbjct: 234 K---NNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF---------------- 274
Query: 300 MRLTPSAKKSGWKAKLIVWFLRWE 323
+ ++KK+ + +LI F RW+
Sbjct: 275 --IVKNSKKTSYLTELIDRFKRWK 296
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 150/305 (49%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL +Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----RQTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 285 QGCLQ 289
++
Sbjct: 325 YTVVK 329
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 49/294 (16%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y + + IG GS+ + I K + A+K + + E E++ L + HP
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE-----EIEILLRYGQHP 76
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NI+ L+++ + +Y V E M L +++ R++ FSE E F I + + Y+H
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHA 134
Query: 120 QGYFHRDLISKNLLVSN-----DTIKIADFGLAWEVDS------CPPYTEYITTLQYRAP 168
QG HRDL N+L + ++I+I DFG A ++ + P YT + AP
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA-----NFVAP 189
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+L G Y++ D+W+LG+++ ++T + F DD +I IGS
Sbjct: 190 EVLERQG-YDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSG--------- 238
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
KF L G + S +D L+ + DP +R TAA L+HP
Sbjct: 239 --------KF-SLSGGYWN----SVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K IG GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ IK+ADFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLA-------WEVDSCPPYTEYITTLQYRAPEM 170
+RDL +NLL+ I++ DFG A W + P +Y APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTP---------EYLAPEI 209
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLF 200
+L G YN VD WALG+++ E+ +P F
Sbjct: 210 ILSKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 116/219 (52%), Gaps = 10/219 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIK---KQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRK 56
E + L++ +G+G +GKV+Q K +G+ A+K LK+ + + ++ + K + + +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
HP IV L +LY + EY+ + R+ F E + +I L +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEV--DSCPPYTEYITTLQYRAPEMLLM 173
+H++G +RDL +N+++++ +K+ DFGL E D +T + T++Y APE+L+
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FCGTIEYMAPEILMR 195
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKI 212
SG +N VD W+LG +M +++T P F G + KI
Sbjct: 196 SG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 7/203 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
+RDL +NLL+ I++ DFG A V T +Y APE++L G Y
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLAGTPEYLAPEIILSKG-Y 215
Query: 178 NSKVDMWALGLIMAELITFHPLF 200
N VD WALG+++ E+ +P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL-KEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G+ VA+K + + + L +EV+ + K+ NHPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-IXKVLNHPN 74
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ + EA K QI+ + Y H++
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK--FRQIVSAVQYCHQK 132
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + Y APE+
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDG 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 49/325 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y + + IG GS+ + + + K + A+K + + E E++ L + HP
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE-----EIEILLRYGQHP 81
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NI+ L+++ + +Y V E M L +++ R++ FSE E I + + Y+H
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 120 QGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDS------CPPYTEYITTLQYRAP 168
QG HRDL N+L +++ ++I DFG A ++ + P YT + AP
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-----NFVAP 194
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+L G Y+ D+W+LG+++ ++ + F D +I IGS
Sbjct: 195 EVLKRQG-YDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG--------- 243
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCL 288
KF L G N + + +A D L+ + DP +R TA + LQHP
Sbjct: 244 --------KF-TLSGGNWNTVSETAKD----LVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
Query: 289 QVPSMSIDSCKMRLTPSAKKSGWKA 313
++P + ++L A + + A
Sbjct: 291 KLPQSQLSHQDLQLVKGAMAATYSA 315
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINNHPN 62
Y L+K IG+G+F KV A +G+ VA+K + K ++ S +EV+ + K+ NHPN
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM-KVLNHPN 67
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
IVKL E+ LY V EY L+++ E E + QI+ + Y H++
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++NLL+ D IKIADFG + E + + Y APE+
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP 185
Query: 180 KVDMWALGLIMAELITFHPLFPG 202
+VD+W+LG+I+ L++ F G
Sbjct: 186 EVDVWSLGVILYTLVSGSLPFDG 208
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + K + + N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 212
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 KG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + K + + N
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 199
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 200 KG-YNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 49/325 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y + + IG GS+ + + + K + A+K + + E E++ L + HP
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE-----EIEILLRYGQHP 81
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NI+ L+++ + +Y V E M L +++ R++ FSE E I + + Y+H
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 120 QGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDS------CPPYTEYITTLQYRAP 168
QG HRDL N+L +++ ++I DFG A ++ + P YT + AP
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTA-----NFVAP 194
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E+L G Y+ D+W+LG+++ ++ + F D +I IGS
Sbjct: 195 EVLKRQG-YDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG--------- 243
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCL 288
KF L G N + + +A D L+ + DP +R TA + LQHP
Sbjct: 244 --------KF-TLSGGNWNTVSETAKD----LVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
Query: 289 QVPSMSIDSCKMRLTPSAKKSGWKA 313
++P + ++L A + + A
Sbjct: 291 KLPQSQLSHQDLQLVKGAMAATYSA 315
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 110/202 (54%), Gaps = 8/202 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+KYT ++IG+G+ G V+ A+ +G+ VAI+ + + +E + + E+ +R+ N +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRE-NKNP 77
Query: 62 NIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV + L+ V EY+ +L +++ + C E ++ C + LQ L ++H
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ S N+L+ D ++K+ DFG ++ +E + T + APE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA-YG 194
Query: 179 SKVDMWALGLIMAELITFHPLF 200
KVD+W+LG++ E+I P +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKIN 58
M + +K +G+G+FGKV +K +G Y A+K L++ I E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ F+E + + +I+ L Y+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ +RD+ +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 181
Query: 177 YNSKVDMWALGLIMAELI 194
Y VD W LG++M E++
Sbjct: 182 YGRAVDWWGLGVVMYEMM 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKIN 58
M + +K +G+G+FGKV +K +G Y A+K L++ I E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ F+E + + +I+ L Y+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ +RD+ +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 181
Query: 177 YNSKVDMWALGLIMAELI 194
Y VD W LG++M E++
Sbjct: 182 YGRAVDWWGLGVVMYEMM 199
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKIN 58
M + +K +G+G+FGKV +K +G Y A+K L++ I E + E + L+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 67
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ F+E + + +I+ L Y+H
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ +RD+ +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 186
Query: 177 YNSKVDMWALGLIMAELI 194
Y VD W LG++M E++
Sbjct: 187 YGRAVDWWGLGVVMYEMM 204
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKIN 58
M + +K +G+G+FGKV +K +G Y A+K L++ I E + E + L+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 65
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ F+E + + +I+ L Y+H
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ +RD+ +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 184
Query: 177 YNSKVDMWALGLIMAELI 194
Y VD W LG++M E++
Sbjct: 185 YGRAVDWWGLGVVMYEMM 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKIN 58
M + +K +G+G+FGKV +K +G Y A+K L++ I E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ F+E + + +I+ L Y+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ +RD+ +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 177 YNSKVDMWALGLIMAELI 194
Y VD W LG++M E++
Sbjct: 182 YGRAVDWWGLGVVMYEMM 199
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YTL IG GS+G+V A++K G + A K Y E+ K+ + K +HPNI
Sbjct: 28 YTLENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHRQG 121
++L E +N +Y V E C +L K+ F E++ +L + Y H+
Sbjct: 86 IRLYETFEDNTDIYLVMEL--CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 122 YFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL +N L D+ +K+ DFGLA + T Y +P++L G Y
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLY 201
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ D W+ G++M L+ +P F + + + KI + E+ W
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWL------------ 249
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCL 288
N+S P A SLI L + P +R T+ +AL+H F+ L
Sbjct: 250 -------NVS---PQAE----SLIRRLLTKSPKQRITSLQALEHEWFEKQL 286
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 38/291 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
YTL IG GS+G+V A++K G + A K Y E+ K+ + K +HPNI
Sbjct: 11 YTLENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHRQG 121
++L E +N +Y V E C +L K+ F E++ +L + Y H+
Sbjct: 69 IRLYETFEDNTDIYLVMEL--CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 122 YFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL +N L D+ +K+ DFGLA + T Y +P++L G Y
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLY 184
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ D W+ G++M L+ +P F + + + KI + +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-------------------REGTFT 225
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCL 288
FP+ N+S P A SLI L + P +R T+ +AL+H F+ L
Sbjct: 226 FPEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEHEWFEKQL 269
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKIN 58
M + +K +G+G+FGKV +K +G Y A+K L++ I E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ F+E + + +I+ L Y+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ +RD+ +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 177 YNSKVDMWALGLIMAELI 194
Y VD W LG++M E++
Sbjct: 182 YGRAVDWWGLGVVMYEMM 199
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 35/279 (12%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IGEGS G V A +K SG VA+K + R E L EV +R H N+V++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL-FNEVVIMRDYQ-HFNVVEMYK 109
Query: 69 LASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDL 127
L+ + E++ L ++S + +E ++ C +LQ L Y+H QG HRD+
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 128 ISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSGQYNSKVDMWA 185
S ++L++ D +K++DFG ++ P + T + APE++ S Y ++VD+W+
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRS-LYATEVDIWS 226
Query: 186 LGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNN 245
LG+++ E++ P + D + + SP PKL+ N
Sbjct: 227 LGIMVIEMVDGEPPY---FSDSPVQAMKRLRDSPP------------------PKLK--N 263
Query: 246 LSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
+ P D +E + DP +R TA E L HP
Sbjct: 264 SHKVSPVLRD----FLERMLVRDPQERATAQELLDHPFL 298
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + TE TL Y PEM + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTELCGTLDYLPPEM-IEGRMH 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 224
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 225 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 117/224 (52%), Gaps = 9/224 (4%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSG----EYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ L+K +G+GSFGKV+ +KK SG + A+K LK+ + + K + +
Sbjct: 25 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP IVKL +LY + +++ +++ F+E +VK + ++ L+++H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G +RDL +N+L+ + IK+ DFGL+ E +D + T++Y APE++ G
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA-IGSP 219
S D W+ G++M E++T F G + + I A +G P
Sbjct: 204 TQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + K + + N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 212
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 KG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 117/224 (52%), Gaps = 9/224 (4%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSG----EYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ L+K +G+GSFGKV+ +KK SG + A+K LK+ + + K + +
Sbjct: 26 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP IVKL +LY + +++ +++ F+E +VK + ++ L+++H
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G +RDL +N+L+ + IK+ DFGL+ E +D + T++Y APE++ G
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA-IGSP 219
S D W+ G++M E++T F G + + I A +G P
Sbjct: 205 TQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
M ++ +K +G+G+FGKV +K +G Y A+K LK+ + ++ + L E + L+ +
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 65
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ FSE + + +I+ L+Y+H
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 119 -RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSG 175
+ +RDL +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDN 184
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y VD W LG++M E++ C Y + + EL
Sbjct: 185 DYGRAVDWWGLGVVMYEMM---------CGRLPFYN----------QDHEKLFELILMEE 225
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKR-----PTAAEALQHPLFQGCL 288
+FP+ G P A SL+ L DP +R A E +QH F G +
Sbjct: 226 IRFPRTLG-------PEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 272
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKIN 58
M + +K +G+G+FGKV +K +G Y A+K L++ I E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ F+E + + +I+ L Y+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ +RD+ +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 177 YNSKVDMWALGLIMAELI 194
Y VD W LG++M E++
Sbjct: 182 YGRAVDWWGLGVVMYEMM 199
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 114/218 (52%), Gaps = 8/218 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIK---KQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRK 56
E + L++ +G+G +GKV+Q K +G+ A+K LK+ + + ++ + K + + +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
HP IV L +LY + EY+ + R+ F E + +I L +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMS 174
+H++G +RDL +N+++++ +K+ DFGL E + + T++Y APE+L+ S
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKI 212
G +N VD W+LG +M +++T P F G + KI
Sbjct: 197 G-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 285 QGCLQ 289
++
Sbjct: 325 YTVVK 329
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 285 QGCLQ 289
++
Sbjct: 325 YTVVK 329
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 117/224 (52%), Gaps = 9/224 (4%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSG----EYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ L+K +G+GSFGKV+ +KK SG + A+K LK+ + + K + +
Sbjct: 25 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP IVKL +LY + +++ +++ F+E +VK + ++ L+++H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G +RDL +N+L+ + IK+ DFGL+ E +D + T++Y APE++ G
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA-IGSP 219
S D W+ G++M E++T F G + + I A +G P
Sbjct: 204 TQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + K + + N
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 233
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 234 KG-YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 285 QGCLQ 289
++
Sbjct: 325 YTVVK 329
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 285 QGCLQ 289
++
Sbjct: 325 YTVVK 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 91
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 147
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 323
Query: 285 QGCLQ 289
++
Sbjct: 324 YTVVK 328
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
M ++ +K +G+G+FGKV +K +G Y A+K LK+ + ++ + L E + L+ +
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 67
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ FSE + + +I+ L+Y+H
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 119 -RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSG 175
+ +RDL +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDN 186
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y VD W LG++M E++ C Y + + EL
Sbjct: 187 DYGRAVDWWGLGVVMYEMM---------CGRLPFYN----------QDHEKLFELILMEE 227
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKR-----PTAAEALQHPLFQGCL 288
+FP+ G P A SL+ L DP +R A E +QH F G +
Sbjct: 228 IRFPRTLG-------PEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 274
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 150/309 (48%), Gaps = 37/309 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAE--GLELAKA 233
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + + +EL
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP- 267
Query: 234 HGYKFPKLQGN-------------NLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQ 280
+F + G N L+ P A + ++ L +D R TA EA++
Sbjct: 268 ---RFNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAME 320
Query: 281 HPLFQGCLQ 289
HP F ++
Sbjct: 321 HPYFYTVVK 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 91
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 147
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 267
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 268 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 323
Query: 285 QGCLQ 289
++
Sbjct: 324 YTVVK 328
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
M ++ +K +G+G+FGKV +K +G Y A+K LK+ + ++ + L E + L+ +
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 66
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ FSE + + +I+ L+Y+H
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 119 -RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSG 175
+ +RDL +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDN 185
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y VD W LG++M E++ C Y + + EL
Sbjct: 186 DYGRAVDWWGLGVVMYEMM---------CGRLPFYN----------QDHEKLFELILMEE 226
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKR-----PTAAEALQHPLFQGCL 288
+FP+ G P A SL+ L DP +R A E +QH F G +
Sbjct: 227 IRFPRTLG-------PEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 101 -FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ +E + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ IK+ DFGLA V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + K + + N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 205
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 206 KG-YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 90
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 146
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 206
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 322
Query: 285 QGCLQ 289
++
Sbjct: 323 YTVVK 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 149/305 (48%), Gaps = 29/305 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLE------ 229
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + +
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 230 ----LAKAHGYKFPK-LQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + ++ + + N L+ P A + ++ L +D R TA EA++HP F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 285 QGCLQ 289
++
Sbjct: 325 YTVVK 329
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 150/309 (48%), Gaps = 37/309 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAE--GLELAKA 233
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + + +EL
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP- 267
Query: 234 HGYKFPKLQGN-------------NLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQ 280
+F + G N L+ P A + ++ L +D R TA EA++
Sbjct: 268 ---RFNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAME 320
Query: 281 HPLFQGCLQ 289
HP F ++
Sbjct: 321 HPYFYTVVK 329
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 101 -FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 101 -FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ IK+ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 101 -FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 150/309 (48%), Gaps = 37/309 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 97
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 153
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 213
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAE--GLELAKA 233
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + + +EL
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP- 272
Query: 234 HGYKFPKLQGN-------------NLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQ 280
+F + G N L+ P A + ++ L +D R TA EA++
Sbjct: 273 ---RFNDILGRHSRKRWERFVHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAME 325
Query: 281 HPLFQGCLQ 289
HP F ++
Sbjct: 326 HPYFYTVVK 334
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R F+E + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 149/302 (49%), Gaps = 33/302 (10%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ Y L++++G G + +V++AI + E V +K LK + +E+K L + P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGP 92
Query: 62 NIVKLQELASE--NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NI+ L ++ + + VFE+++ + QL Q ++ +++ + ++IL+ L+Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH 148
Query: 119 RQGYFHRDLISKNLLVSND--TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
G HRD+ N+++ ++ +++ D+GLA Y + + ++ PE+L+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 177 YNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAE--GLEL--- 230
Y+ +DMW+LG ++A +I P F G DQL +I +G+ + + +EL
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 231 --------AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
++ +F + N L+ P A + ++ L +D R TA EA++HP
Sbjct: 269 FNDILGRHSRKRWERF--VHSENQHLVSPEA----LDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 283 LF 284
F
Sbjct: 323 YF 324
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL--KEVKCLRKINNHP 61
Y ++K +GEGSFGKV A +G+ VA+K + +++ + + +E+ LR + HP
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+I+KL ++ + V EY L + R + SE E + + QI+ + Y HR
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK 123
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSK 180
HRDL +NLL+ +KIADFGL+ + + Y APE++ +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 183
Query: 181 VDMWALGLIM 190
VD+W+ G+I+
Sbjct: 184 VDVWSCGVIL 193
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + T+ TL Y PEM + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLCGTLDYLPPEM-IEGRMH 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 224
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 225 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL--KEVKCLRKINNHP 61
Y ++K +GEGSFGKV A +G+ VA+K + +++ + + +E+ LR + HP
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+I+KL ++ + V EY L + R + SE E + + QI+ + Y HR
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK 132
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSK 180
HRDL +NLL+ +KIADFGL+ + + Y APE++ +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 181 VDMWALGLIM 190
VD+W+ G+I+
Sbjct: 193 VDVWSCGVIL 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL--KEVKCLRKINNHP 61
Y ++K +GEGSFGKV A +G+ VA+K + +++ + + +E+ LR + HP
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 68
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+I+KL ++ + V EY L + R + SE E + + QI+ + Y HR
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK 127
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSK 180
HRDL +NLL+ +KIADFGL+ + + Y APE++ +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 181 VDMWALGLIM 190
VD+W+ G+I+
Sbjct: 188 VDVWSCGVIL 197
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + T+ TL Y PEM + +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLCGTLDYLPPEM-IEGRMH 184
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 225
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 226 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNL--KEVKCLRKINNHP 61
Y ++K +GEGSFGKV A +G+ VA+K + +++ + + +E+ LR + HP
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 74
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+I+KL ++ + V EY L + R + SE E + + QI+ + Y HR
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHRHK 133
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSK 180
HRDL +NLL+ +KIADFGL+ + + Y APE++ +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 181 VDMWALGLIM 190
VD+W+ G+I+
Sbjct: 194 VDVWSCGVIL 203
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 119
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 232
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 233 SKG-YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + T+ TL Y PEM + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLCGTLDYLPPEM-IEGRMH 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 224
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 225 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMSGQ 176
+ HRD+ +NLL+ S +KIADFG W V + T+ TL Y PEM +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTDLCGTLDYLPPEM-IEGRM 187
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
++ KVD+W+LG++ E + P F + +I +
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EF 228
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 229 TFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ ++ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 180
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 221
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 222 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 185
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 226
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 227 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
M ++ +K +G+G+FGKV +K +G Y A+K LK+ + ++ + L E + L+ +
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 205
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ FSE + + +I+ L+Y+H
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 119 -RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSG 175
+ +RDL +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDN 324
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y VD W LG++M E++ C Y + + EL
Sbjct: 325 DYGRAVDWWGLGVVMYEMM---------CGRLPFYN----------QDHEKLFELILMEE 365
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKR-----PTAAEALQHPLFQGCL 288
+FP+ G P A SL+ L DP +R A E +QH F G +
Sbjct: 366 IRFPRTLG-------PEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 412
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 144/304 (47%), Gaps = 35/304 (11%)
Query: 4 YTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
Y L + + GEG+ +V I + + A+K ++++ + +EV+ L + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRN 72
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+++L E E R Y VFE M ++++ F+E E + L+++H +G
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 123 FHRDLISKNLLVSN----DTIKIADFGLAWEV---DSCPPYT--EYIT---TLQYRAPEM 170
HRDL +N+L + +KI DF L + C P + E +T + +Y APE+
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 171 LLMSGQ----YNSKVDMWALGLIMAELITFHPLFPGTCEDD---QLYKICNAIGSPTEES 223
+ + Y+ + D+W+LG+I+ L++ +P F G C D + C A + ES
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 224 WAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPL 283
EG Y+FP ++S +A D LI L D +R +AA+ LQHP
Sbjct: 253 IQEG-------KYEFPDKDWAHISC---AAKD----LISKLLVRDAKQRLSAAQVLQHPW 298
Query: 284 FQGC 287
QGC
Sbjct: 299 VQGC 302
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
M ++ +K +G+G+FGKV +K +G Y A+K LK+ + ++ + L E + L+ +
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 208
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HP + L+ + RL FV EY + +R++ FSE + + +I+ L+Y+H
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 119 -RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSG 175
+ +RDL +NL++ D IKI DFGL E + + T +Y APE +L
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDN 327
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
Y VD W LG++M E++ C Y + + EL
Sbjct: 328 DYGRAVDWWGLGVVMYEMM---------CGRLPFYN----------QDHEKLFELILMEE 368
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKR-----PTAAEALQHPLFQGCL 288
+FP+ G P A SL+ L DP +R A E +QH F G +
Sbjct: 369 IRFPRTLG-------PEAK----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 415
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ I++ DFG A V C T +Y APE+++
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIII 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 12/217 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L+K++G G FG+VW + + VAIK LK S E L +E + ++K+ H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPESFL--EEAQIMKKLK-HD 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM+ L L + + + Q+ G+ Y+ R
Sbjct: 65 KLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
Y HRDL S N+LV N I KIADFGLA ++ +++ APE L G+
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY-GR 182
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
+ K D+W+ G+++ EL+T + +PG + L ++
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + K + + N
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 207
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 208 KG-YNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + K + + N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 212
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 KG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 123/295 (41%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + T TL Y PEM + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRTXLCGTLDYLPPEM-IEGRMH 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 224
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 225 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 181
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 222
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 223 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 186
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 227
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 228 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 40/287 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 184
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 225
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
+ FP + A D LI L +P +RP E L+HP
Sbjct: 226 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHP 261
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ +E + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ I++ DFGLA V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 184
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 225
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 226 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 109/202 (53%), Gaps = 8/202 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+KYT ++IG+G+ G V+ A+ +G+ VAI+ + + +E + + E+ +R+ N +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRE-NKNP 77
Query: 62 NIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV + L+ V EY+ +L +++ + C E ++ C + LQ L ++H
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ S N+L+ D ++K+ DFG ++ + + T + APE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YG 194
Query: 179 SKVDMWALGLIMAELITFHPLF 200
KVD+W+LG++ E+I P +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 109/202 (53%), Gaps = 8/202 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+KYT ++IG+G+ G V+ A+ +G+ VAI+ + + +E + + E+ +R+ N +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRE-NKNP 77
Query: 62 NIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV + L+ V EY+ +L +++ + C E ++ C + LQ L ++H
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ S N+L+ D ++K+ DFG ++ + + T + APE++ Y
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA-YG 194
Query: 179 SKVDMWALGLIMAELITFHPLF 200
KVD+W+LG++ E+I P +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 109/202 (53%), Gaps = 8/202 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+KYT ++IG+G+ G V+ A+ +G+ VAI+ + + +E + + E+ +R+ N +P
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRE-NKNP 78
Query: 62 NIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV + L+ V EY+ +L +++ + C E ++ C + LQ L ++H
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ S N+L+ D ++K+ DFG ++ + + T + APE++ Y
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA-YG 195
Query: 179 SKVDMWALGLIMAELITFHPLF 200
KVD+W+LG++ E+I P +
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPY 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 40/292 (13%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNH 60
E + ++ ++G+G+FGKV++A K++G A K ++ + S EE + + E++ L + H
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCD-H 67
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P IVKL + +L+ + E+ + +M + +E +++ C Q+L+ LN++H
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGL-AWEVDSCPPYTEYITTLQYRAPEML----LM 173
+ HRDL + N+L++ I++ADFG+ A + + +I T + APE++ +
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
Y+ K D+W+LG+ + E+ P L KI + PT
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPT------------- 233
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEM-SLIELLCSWDPCKRPTAAEALQHPLF 284
LL PS E +++ +P RP+AA+ L+HP
Sbjct: 234 --------------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE---CLNLKEVKCLRKINNH 60
+ + +++G G FG V + I + +GE VAIK +Q + CL E++ ++K+N H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLN-H 72
Query: 61 PNIVK-------LQELASENYRLYFVFEYMDC-NLHQLMSNRKQC--FSEAEVKNWCFQI 110
PN+V LQ+LA + L EY + +L + ++ + C E ++ I
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 111 LQGLNYMHRQGYFHRDLISKNLLVSNDTI----KIADFGLAWEVDSCPPYTEYITTLQYR 166
L Y+H HRDL +N+++ KI D G A E+D TE++ TLQY
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 167 APEMLLMSGQYNSKVDMWALGLIMAELIT-FHPLFP 201
APE LL +Y VD W+ G + E IT F P P
Sbjct: 192 APE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%), Gaps = 19/232 (8%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L+K++G G FG+VW S + VA+K LK S + L E L K H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFL---EEANLMKTLQHD 68
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + + +Y + EYM L L S+ ++ ++ QI +G+ Y+ R
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS + KIADFGLA ++ EY +++ APE +
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIED----NEYTAREGAKFPIKWTAPEAIN 184
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGSPTEES 223
G + K D+W+ G+++ E++T+ + +PG D + + P E+
Sbjct: 185 F-GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVEN 235
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE---CLNLKEVKCLRKINNH 60
+ + +++G G FG V + I + +GE VAIK +Q + CL E++ ++K+N H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLN-H 71
Query: 61 PNIVK-------LQELASENYRLYFVFEYMDC-NLHQLMSNRKQC--FSEAEVKNWCFQI 110
PN+V LQ+LA + L EY + +L + ++ + C E ++ I
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 111 LQGLNYMHRQGYFHRDLISKNLLVSNDTI----KIADFGLAWEVDSCPPYTEYITTLQYR 166
L Y+H HRDL +N+++ KI D G A E+D TE++ TLQY
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 167 APEMLLMSGQYNSKVDMWALGLIMAELIT-FHPLFP 201
APE LL +Y VD W+ G + E IT F P P
Sbjct: 191 APE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 123/296 (41%), Gaps = 34/296 (11%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
+ HRD+ +NLL+ S +KIADFG + S T TL Y PEM + ++
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS-RRTTLSGTLDYLPPEM-IEGRMHD 185
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKF 238
KVD+W+LG++ E + P F + +I + F
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFTF 226
Query: 239 PKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
P + A D LI L +P +RP E L+HP PS S
Sbjct: 227 P-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNS 271
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y AP ++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPAIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 20/232 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK--EVKCLRKIN 58
M++Y + IG+GSFG+V +A + E+VAIK +K + + LN EV+ L +N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMN 108
Query: 59 NHPN-----IVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQ 112
H IV L+ L VFE + NL+ L+ N + S + + Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 113 GLNYMHRQ--GYFHRDLISKNLLVSN---DTIKIADFGLAWEVDSCPPYTEYITTLQYRA 167
L ++ H DL +N+L+ N IKI DFG + ++ + I + YR+
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQSRFYRS 226
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSP 219
PE+LL Y+ +DMW+LG I+ E+ T PLF G E DQ+ KI +G P
Sbjct: 227 PEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 20/232 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK--EVKCLRKIN 58
M++Y + IG+GSFG+V +A + E+VAIK +K + + LN EV+ L +N
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMN 89
Query: 59 NHPN-----IVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQ 112
H IV L+ L VFE + NL+ L+ N + S + + Q+
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 113 GLNYMHRQ--GYFHRDLISKNLLVSN---DTIKIADFGLAWEVDSCPPYTEYITTLQYRA 167
L ++ H DL +N+L+ N IKI DFG + ++ + I + YR+
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQSRFYRS 207
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSP 219
PE+LL Y+ +DMW+LG I+ E+ T PLF G E DQ+ KI +G P
Sbjct: 208 PEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +K S +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L ++ R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + + TL Y PEM+ +
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRAALCGTLDYLPPEMI-EGRMH 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F D +I +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-------------------EFT 224
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 225 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V K++G + A+K L KQ++ ++ + K + + N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 205
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 206 KG-YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + + + TL Y PEM + +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRDTLCGTLDYLPPEM-IEGRMH 184
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 225
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 226 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 126/298 (42%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 82
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMS 174
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEG 197
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
++ KVD+W+LG++ E + P F + +I
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------------- 238
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 239 EFTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A ++QS +A+K L K ++ L+ ++
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ SN +KIADFG W V + P + T TL Y PEM +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 185
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-------------------E 226
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L + +R T AE L+HP + PS
Sbjct: 227 FTFP-------DFVTEGARD----LISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 40/292 (13%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNH 60
E + ++ ++G+G+FGKV++A K++G A K ++ + S EE + + E++ L + H
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCD-H 75
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P IVKL + +L+ + E+ + +M + +E +++ C Q+L+ LN++H
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGL-AWEVDSCPPYTEYITTLQYRAPEML----LM 173
+ HRDL + N+L++ I++ADFG+ A + + +I T + APE++ +
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
Y+ K D+W+LG+ + E+ P L KI + PT
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPT------------- 241
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEM-SLIELLCSWDPCKRPTAAEALQHPLF 284
LL PS E +++ +P RP+AA+ L+HP
Sbjct: 242 --------------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 114/202 (56%), Gaps = 15/202 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
E+ TL+K++G G FG V + K G+Y VA+K +K+ S +E +E + + K++ H
Sbjct: 8 EEITLLKELGSGQFGVV--KLGKWKGQYDVAVKMIKEGSMSEDEFF--QEAQTMMKLS-H 62
Query: 61 PNIVKLQELASENYRLYFVFEYMD--CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VK + S+ Y +Y V EY+ C L+ L S+ K +++ C+ + +G+ ++
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLE 121
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMS 174
+ HRDL ++N LV D +K++DFG+ V Y + T +++ APE +
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPE-VFHY 179
Query: 175 GQYNSKVDMWALGLIMAELITF 196
+Y+SK D+WA G++M E+ +
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSL 201
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + + + TL Y PEM + +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRDDLCGTLDYLPPEM-IEGRMH 186
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 227
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 228 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 126/298 (42%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 91
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMS 174
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEG 206
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
++ KVD+W+LG++ E + P F + +I
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------------- 247
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 248 EFTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 20/232 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK--EVKCLRKIN 58
M++Y + IG+GSFG+V +A + E+VAIK +K + + LN EV+ L +N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMN 108
Query: 59 NHPN-----IVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQ 112
H IV L+ L VFE + NL+ L+ N + S + + Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 113 GLNYMHRQ--GYFHRDLISKNLLVSN---DTIKIADFGLAWEVDSCPPYTEYITTLQYRA 167
L ++ H DL +N+L+ N IKI DFG + ++ + I + YR+
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ--RIYQXIQSRFYRS 226
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSP 219
PE+LL Y+ +DMW+LG I+ E+ T PLF G E DQ+ KI +G P
Sbjct: 227 PEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 35/292 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E + +++++GEGS+G V++AI K++G+ VAIK + +E +KE+ +++ ++ P
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-SDLQEI--IKEISIMQQCDS-P 84
Query: 62 NIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
++VK +N L+ V EY ++ ++ R + +E E+ L+GL Y+H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 121 GYFHRDLISKNLLVSNDT-IKIADFGLAWEV-DSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ + N+L++ + K+ADFG+A ++ D I T + APE++ G YN
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG-YN 203
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKF 238
D+W+LG+ E+ P + ++ I PT ++
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI------PTNPPPT----------FRK 247
Query: 239 PKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQV 290
P+L +N + ++ P +R TA + LQHP + V
Sbjct: 248 PELWSDNFT-----------DFVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 36/326 (11%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ + +G G+F +V A +K +G+ A+K + ++ +E E+ LRKI H NI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK-HENI 82
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
V L+++ LY V + + K ++E + Q+L + Y+HR G
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 124 HRDLISKNLL-VSND---TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +NLL S D I I+DFGL+ + T Y APE+L Y+
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQK-PYSK 201
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
VD W++G+I L+ +P F D +L++ ++ KA Y+F
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDE-NDSKLFE-----------------QILKAE-YEFD 242
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
+++S D I L DP KR T +A +HP G + +S
Sbjct: 243 SPYWDDIS-------DSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVS 295
Query: 300 MRLTPSAKKSGWK----AKLIVWFLR 321
++ + KS W+ A +V +R
Sbjct: 296 AQIRKNFAKSKWRQAFNATAVVRHMR 321
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + + TL Y PEM + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRXXLCGTLDYLPPEM-IEGRMH 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 224
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 225 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 126/295 (42%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A ++QS +A+K L K ++ L+ ++
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ SN +KIADFG W V + + + TL Y PEM + +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFG--WSVHAPSSRRDTLCGTLDYLPPEM-IEGRMH 187
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-------------------EFT 228
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L + +R T AE L+HP + PS
Sbjct: 229 FP-------DFVTEGARD----LISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + + TL Y PEM + +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRAALCGTLDYLPPEM-IEGRMH 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 224
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 225 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G FG+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 70
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLA--WEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++N LV N +K+ADFGL+ D+ + +++ APE L + +++
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN-KFSI 189
Query: 180 KVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKF 238
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYELLE-------------------KDYRM 229
Query: 239 PKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 230 ERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 274
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 44/321 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
Y +++++G G+FG V + ++K +G K + Y ++ E+ + +++ HP +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-YPLDKYTVKNEISIMNQLH-HPKL 110
Query: 64 VKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ L + + Y + + E++ L ++ SEAEV N+ Q +GL +MH
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI 170
Query: 123 FHRDLISKNLLVSN---DTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS--GQY 177
H D+ +N++ ++KI DFGLA +++ T ++ APE++ G Y
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
DMWA+G++ L++ L P EDD E L+ K ++
Sbjct: 231 ---TDMWAIGVLGYVLLS--GLSPFAGEDD-----------------LETLQNVKRCDWE 268
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG-----CLQVPS 292
F + + S + P A D I+ L +P KR T +AL+HP +G ++PS
Sbjct: 269 FDE---DAFSSVSPEAKD----FIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPS 321
Query: 293 MSIDSCKMRLTPSAKKSGWKA 313
+ + ++ K + W A
Sbjct: 322 SRYNKIRQKI--KEKYADWPA 340
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 101 -FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V K+SG + A+K L KQ++ ++ + L E + L+ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
N P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T + APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEALAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + K + + N
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-------GTPEYLAPEIILS 198
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 199 KG-YNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKIN 58
++ + L++ IG GS+ KV K++ A+K +K+ + + +E ++ E + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP +V L RL+FV EY++ R++ E + + +I LNY+H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+G +RDL N+L+ ++ IK+ D+G+ E + + + T Y APE +L
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGED 182
Query: 177 YNSKVDMWALGLIMAELIT 195
Y VD WALG++M E++
Sbjct: 183 YGFSVDWWALGVLMFEMMA 201
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + K + + N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 212
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 KG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKIN 58
++ + L++ IG GS+ KV K++ A+K +K+ + + +E ++ E + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP +V L RL+FV EY++ R++ E + + +I LNY+H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+G +RDL N+L+ ++ IK+ D+G+ E + + + T Y APE +L
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGED 186
Query: 177 YNSKVDMWALGLIMAELIT 195
Y VD WALG++M E++
Sbjct: 187 YGFSVDWWALGVLMFEMMA 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 36/285 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + + TL Y PEM + +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRXXLCGTLDYLPPEM-IEGRMH 186
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 227
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
FP + A D LI L +P +RP E L+HP
Sbjct: 228 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHP 261
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + K + + N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 213
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 214 KG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ IK+ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 123/295 (41%), Gaps = 36/295 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQY 177
+ HRD+ +NLL+ S +KIADFG W V + + TL Y PEM + +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRXXLCGTLDYLPPEM-IEGRMH 185
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ KVD+W+LG++ E + P F + +I +
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EFT 226
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 227 FP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY+ R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIA+FG W V + P + T TL Y PEM +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 184
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 225
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 226 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRK 56
+ Y + +++G G F V + +K +G EY A K+R+ S ++ +EV LR+
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
I HPNI+ L ++ + + E + L ++ K+ +E E + QIL G++
Sbjct: 65 IR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVH 122
Query: 116 YMHRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N++ V N IK+ DFG+A ++++ + T ++ APE+
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 182
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I EE ++ EL
Sbjct: 183 VNYE-PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
AK I L DP +R T A++L+H
Sbjct: 242 AK--------------------------DFIRRLLVKDPKRRMTIAQSLEH 266
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 52/324 (16%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E +T +++IG+GSFG+V++ I ++ + VAIK + E +E+ L + ++ P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-P 80
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+ K ++ +L+ + EY+ L E ++ +IL+GL+Y+H +
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGG-SALDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 122 YFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRD+ + N+L+S + +K+ADFG+A ++ D+ ++ T + APE++ S Y+S
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDS 198
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
K D+W+LG+ EL A G P L P
Sbjct: 199 KADIWSLGITAIEL---------------------ARGEPPHSELHPMKVLFLIPKNNPP 237
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
L+GN L +E + +P RPTA E L+H
Sbjct: 238 TLEGNYSKPL--------KEFVEACLNKEPSFRPTAKELLKHKFI--------------- 274
Query: 300 MRLTPSAKKSGWKAKLIVWFLRWE 323
+R +AKK+ + +LI + RW+
Sbjct: 275 LR---NAKKTSYLTELIDRYKRWK 295
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 52/324 (16%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E +T +++IG+GSFG+V++ I ++ + VAIK + E +E+ L + ++ P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-P 65
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+ K ++ +L+ + EY+ L E ++ +IL+GL+Y+H +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGG-SALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 122 YFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRD+ + N+L+S + +K+ADFG+A ++ D+ ++ T + APE++ S Y+S
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDS 183
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
K D+W+LG+ EL A G P L P
Sbjct: 184 KADIWSLGITAIEL---------------------ARGEPPHSELHPMKVLFLIPKNNPP 222
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
L+GN L +E + +P RPTA E L+H
Sbjct: 223 TLEGNYSKPL--------KEFVEACLNKEPSFRPTAKELLKHKFI--------------- 259
Query: 300 MRLTPSAKKSGWKAKLIVWFLRWE 323
+R +AKK+ + +LI + RW+
Sbjct: 260 LR---NAKKTSYLTELIDRYKRWK 280
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 49/295 (16%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+ Y + + IG GS+ + I K + A+K + + E E++ L + H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE-----EIEILLRYGQH 75
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
PNI+ L+++ + +Y V E L +++ R++ FSE E F I + + Y+H
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLH 133
Query: 119 RQGYFHRDLISKNLLVSN-----DTIKIADFGLAWEVDS------CPPYTEYITTLQYRA 167
QG HRDL N+L + ++I+I DFG A ++ + P YT + A
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTA-----NFVA 188
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEG 227
PE+L G Y++ D+W+LG+++ +T + F DD +I IGS
Sbjct: 189 PEVLERQG-YDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSG-------- 238
Query: 228 LELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
KF L G + S +D L+ DP +R TAA L+HP
Sbjct: 239 ---------KF-SLSGGYWN----SVSDTAKDLVSKXLHVDPHQRLTAALVLRHP 279
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQS +A+K L K ++ L+ ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 186
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 227
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 228 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 52/324 (16%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E +T +++IG+GSFG+V++ I ++ + VAIK + E +E+ L + ++ P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-P 65
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+ K ++ +L+ + EY+ L E ++ +IL+GL+Y+H +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGG-SALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 122 YFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRD+ + N+L+S + +K+ADFG+A ++ D+ ++ T + APE++ S Y+S
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDS 183
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
K D+W+LG+ EL P +L+ + P P
Sbjct: 184 KADIWSLGITAIELARGEP------PHSELHPMKVLFLIPKNNP---------------P 222
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCK 299
L+GN L +E + +P RPTA E L+H
Sbjct: 223 TLEGNYSKPL--------KEFVEACLNKEPSFRPTAKELLKHKFI--------------- 259
Query: 300 MRLTPSAKKSGWKAKLIVWFLRWE 323
+R +AKK+ + +LI + RW+
Sbjct: 260 LR---NAKKTSYLTELIDRYKRWK 280
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 64/313 (20%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-----LKEVKCLRK 56
+ Y L + IG G+ V A E VAIK + + E+C LKE++ + +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-----NLEKCQTSMDELLKEIQAMSQ 64
Query: 57 INNHPNIVKLQELASENYRLYFVFE------YMDCNLHQLMS--NRKQCFSEAEVKNWCF 108
+ HPNIV L+ V + +D H + ++ E+ +
Sbjct: 65 CH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 109 QILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTE------YIT 161
++L+GL Y+H+ G HRD+ + N+L+ D +++IADFG++ + + T ++
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 162 TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELIT----FHPLFPG-----TCEDDQLYKI 212
T + APE++ Y+ K D+W+ G+ EL T +H P T ++D
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND----- 238
Query: 213 CNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKR 272
P+ E+ + E+ K +G F K +I L DP KR
Sbjct: 239 -----PPSLETGVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKR 274
Query: 273 PTAAEALQHPLFQ 285
PTAAE L+H FQ
Sbjct: 275 PTAAELLRHKFFQ 287
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQ 176
+ HRD+ +NLL+ S +KIADFG W V + + TL Y PEM +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRAALCGTLDYLPPEM-IEGRM 185
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
++ KVD+W+LG++ E + P F + +I +
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EF 226
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 227 TFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 91
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQ 176
+ HRD+ +NLL+ S +KIADFG W V + + + TL Y PEM +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRDDLCGTLDYLPPEM-IEGRM 208
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
++ KVD+W+LG++ E + P F + +I +
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EF 249
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 250 TFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 40/287 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
+E + + + +G+G FG V+ A +KQ +A+K L K ++ L+ ++
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMSG 175
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PEM +
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEGR 178
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ KVD+W+LG++ E + P F + +I
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------E 219
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
+ FP + A D LI L +P +RP E L+HP
Sbjct: 220 FTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHP 255
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKIN 58
++ + L++ IG GS+ KV K++ A+K +K+ + + +E ++ E + +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP +V L RL+FV EY++ R++ E + + +I LNY+H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+G +RDL N+L+ ++ IK+ D+G+ E + + + T Y APE +L
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-ILRGED 197
Query: 177 YNSKVDMWALGLIMAELIT 195
Y VD WALG++M E++
Sbjct: 198 YGFSVDWWALGVLMFEMMA 216
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 70
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLA--WEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++N LV N +K+ADFGL+ D+ + +++ APE L + +++
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN-KFSI 189
Query: 180 KVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKF 238
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYELLE-------------------KDYRM 229
Query: 239 PKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 230 ERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 274
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINNHPN 62
+ +++G G+FG V ++ SG IK + K R E + E++ L+ ++ HPN
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE-AEIEVLKSLD-HPN 81
Query: 63 IVKLQELASENYRLYFVFEYMDCN--LHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMH 118
I+K+ E+ + + +Y V E + L +++S R + SE V Q++ L Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 119 RQGYFHRDLISKNLLVSNDT----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
Q H+DL +N+L + + IKI DFGLA S T T Y APE+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD 201
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+ K D+W+ G++M L+T F GT + E+ +
Sbjct: 202 VTF--KCDIWSAGVVMYFLLTGCLPFTGTSLE----------------------EVQQKA 237
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
YK P L P A D L++ + + DP +RP+AA+ L H F+
Sbjct: 238 TYKEPNY-AVECRPLTPQAVD----LLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 67
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMS 174
+ HRD+ +NLL+ S +KIA+FG W V + P + T TL Y PEM +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFG--WSVHA--PSSRRTTLCGTLDYLPPEM-IEG 182
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
++ KVD+W+LG++ E + P F + +I
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------------- 223
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 224 EFTFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 64/313 (20%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-----LKEVKCLRK 56
+ Y L + IG G+ V A E VAIK + + E+C LKE++ + +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-----NLEKCQTSMDELLKEIQAMSQ 69
Query: 57 INNHPNIVKLQELASENYRLYFVFE------YMDCNLHQLMS--NRKQCFSEAEVKNWCF 108
+ HPNIV L+ V + +D H + ++ E+ +
Sbjct: 70 CH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 109 QILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTE------YIT 161
++L+GL Y+H+ G HRD+ + N+L+ D +++IADFG++ + + T ++
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 162 TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELIT----FHPLFPG-----TCEDDQLYKI 212
T + APE++ Y+ K D+W+ G+ EL T +H P T ++D
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND----- 243
Query: 213 CNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKR 272
P+ E+ + E+ K +G F K +I L DP KR
Sbjct: 244 -----PPSLETGVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKR 279
Query: 273 PTAAEALQHPLFQ 285
PTAAE L+H FQ
Sbjct: 280 PTAAELLRHKFFQ 292
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 42/298 (14%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLMS 174
+ HRD+ +NLL+ S +KIADFG W V + P + T TL Y PE +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG--WSVHA--PSSRRTTLCGTLDYLPPEX-IEG 185
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
++ KVD+W+LG++ E + P F + +I
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------------- 226
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ FP + A D LI L +P +RP E L+HP PS
Sbjct: 227 EFTFP-------DFVTEGARD----LISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 109/199 (54%), Gaps = 5/199 (2%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E +T +++IG+GSFG+V++ I ++ + VAIK + E +E+ L + ++ P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-P 85
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+ K ++ +L+ + EY+ L E ++ +IL+GL+Y+H +
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGG-SALDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 122 YFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRD+ + N+L+S + +K+ADFG+A ++ D+ ++ T + APE++ S Y+S
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA-YDS 203
Query: 180 KVDMWALGLIMAELITFHP 198
K D+W+LG+ EL P
Sbjct: 204 KADIWSLGITAIELARGEP 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 109/202 (53%), Gaps = 8/202 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+KYT ++IG+G+ G V+ A+ +G+ VAI+ + + +E + + E+ +R+ N +P
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRE-NKNP 78
Query: 62 NIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV + L+ V EY+ +L +++ + C E ++ C + LQ L ++H
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSGQYN 178
HR++ S N+L+ D ++K+ DFG ++ + + T + APE++ Y
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA-YG 195
Query: 179 SKVDMWALGLIMAELITFHPLF 200
KVD+W+LG++ E+I P +
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
M++Y + +G+G F K ++ + E A K + K + + + + K +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYM 117
+P++V ++ +Y V E C L+ R++ +E E + + Q +QG+ Y+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H HRDL NL +++D +KI DFGLA +++ + T Y APE+L G
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ +VD+W+LG I+ L+ P F +C + +I K +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 258
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF----------Q 285
Y P+ N +LI + DP RP+ AE L F
Sbjct: 259 YSVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
Query: 286 GCLQVP 291
CL VP
Sbjct: 308 SCLTVP 313
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 72
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 190
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 230
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 231 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 276
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 72
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 190
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 230
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 231 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 276
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKIN 58
++ + L++ IG GS+ KV K++ A++ +K+ + + +E ++ E + +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
NHP +V L RL+FV EY++ R++ E + + +I LNY+H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+G +RDL N+L+ ++ IK+ D+G+ E + + + T Y APE +L
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE-ILRGED 229
Query: 177 YNSKVDMWALGLIMAELIT 195
Y VD WALG++M E++
Sbjct: 230 YGFSVDWWALGVLMFEMMA 248
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
M++Y + +G+G F K ++ + E A K + K + + + + K +
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYM 117
+P++V ++ +Y V E C L+ R++ +E E + + Q +QG+ Y+
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLLMSG 175
H HRDL NL +++D +KI DFGLA +++ + T Y APE+L G
Sbjct: 143 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ +VD+W+LG I+ L+ P F +C + +I K +
Sbjct: 203 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 242
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF----------Q 285
Y P+ N +LI + DP RP+ AE L F
Sbjct: 243 YSVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 291
Query: 286 GCLQVP 291
CL VP
Sbjct: 292 SCLTVP 297
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL--KQRIYSWEECLNLKEVKCLRKIN 58
+E + + + +G+G FG V+ A +KQS +A+K L Q + E +EV+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
HPNI++L + R+Y + EY + F E + ++ L+Y H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYIT-TLQYRAPEMLLMSGQ 176
+ HRD+ +NLL+ S +KIADFG W V + + TL Y PEM +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG--WSVHAPSSRRXXLXGTLDYLPPEM-IEGRM 187
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
++ KVD+W+LG++ E + P F + +I +
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-------------------EF 228
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
FP + A D LI L +P +RP E L+HP PS
Sbjct: 229 TFP-------DFVTEGARD----LISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 70
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLA--WEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++N LV N +K+ADFGL+ D+ + +++ APE L + +++
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYN-KFSI 189
Query: 180 KVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKF 238
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPG-IDPSQVYELLE-------------------KDYRM 229
Query: 239 PKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 230 ERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 274
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
M++Y + +G+G F K ++ + E A K + K + + + + K +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYM 117
+P++V ++ +Y V E C L+ R++ +E E + + Q +QG+ Y+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSG 175
H HRDL NL +++D +KI DFGLA +++ + + T Y APE+L G
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ +VD+W+LG I+ L+ P F +C + +I K +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 258
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF----------Q 285
Y P+ N +LI + DP RP+ AE L F
Sbjct: 259 YSVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
Query: 286 GCLQVP 291
CL VP
Sbjct: 308 SCLTVP 313
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ I++ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 48/306 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
M++Y + +G+G F K ++ + E A K + K + + + + K +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYM 117
+P++V ++ +Y V E C L+ R++ +E E + + Q +QG+ Y+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 118 HRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSG 175
H HRDL NL +++D +KI DFGLA +++ + + T Y APE+L G
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 176 QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
++ +VD+W+LG I+ L+ P F +C + +I K +
Sbjct: 219 -HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------KKNE 258
Query: 236 YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF----------Q 285
Y P+ N +LI + DP RP+ AE L F
Sbjct: 259 YSVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
Query: 286 GCLQVP 291
CL VP
Sbjct: 308 SCLTVP 313
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 125/306 (40%), Gaps = 71/306 (23%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNH------- 60
+G+G+FG+V +A Y AIK ++ EE L+ L EV L +N+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 61 -----PNIVKLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N VK + L+ EY + L+ L+ + E QIL+ L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEV---------------DSCPPYTE 158
+Y+H QG HRDL N+ + +KI DFGLA V S T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGS 218
I T Y A E+L +G YN K+DM++LG+I E+I +P G + L K+
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKL------ 241
Query: 219 PTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEM----SLIELLCSWDPCKRPT 274
++ +FP P +D++M +I LL DP KRP
Sbjct: 242 -------------RSVSIEFP-----------PDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 275 AAEALQ 280
A L
Sbjct: 278 ARTLLN 283
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + K + + N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P + KL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NL++ IK+ DFG A V C T +Y APE++L
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 213
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 214 KG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 36/286 (12%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNHPNIVK 65
K++G G F V Q I K +G+ A K LK+R ++C L E+ L + P ++
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKR-RRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 66 LQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L E+ + + EY + + SE +V QIL+G+ Y+H+
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 124 HRDLISKNLLVSN----DTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
H DL +N+L+S+ IKI DFG++ ++ E + T +Y APE +L +
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPE-ILNYDPITT 212
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
DMW +G+I L+T F G + I +EE+++ +LA
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLA-------- 264
Query: 240 KLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
I+ L +P KRPTA L H Q
Sbjct: 265 ------------------TDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P + KL+ +N LY V EY R FSE + + QI+ Y+H
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ IK+ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + K + + N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 212
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 KG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 72
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 190
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 230
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 231 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 276
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 11/201 (5%)
Query: 6 LMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNHPNIV 64
++ ++G+G+FGKV++A K++ A K + + S EE + + E+ L + HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCD-HPNIV 97
Query: 65 KLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
KL + L+ + E+ + +M ++ +E++++ C Q L LNY+H
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 124 HRDLISKNLLVSND-TIKIADFGL-AWEVDSCPPYTEYITTLQYRAPEMLLMSGQ----Y 177
HRDL + N+L + D IK+ADFG+ A + +I T + APE+++ Y
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 178 NSKVDMWALGLIMAELITFHP 198
+ K D+W+LG+ + E+ P
Sbjct: 218 DYKADVWSLGITLIEMAEIEP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P +VKL+ +N LY V EY R F E + + QI+ Y+H
Sbjct: 100 -FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ IK+ DFG A V C T +Y APE++L
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 211
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 212 SKG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 72
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 190
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 230
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 231 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 276
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + K + + N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 212
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 KG-YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + K + + N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +VKL+ +N LY V EY+ R F E + + QI+ Y+H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLLM 173
+RDL +NLL+ I++ DFG A V C T +Y APE++L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIILS 213
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 214 KG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRK 56
+ Y + +++G G F V + +K +G EY A K+R+ S ++ +EV LR+
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
I HPNI+ L ++ + + E + L ++ K+ +E E + QIL G++
Sbjct: 86 IR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVH 143
Query: 116 YMHRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N++ V N IK+ DFG+A ++++ + T ++ APE+
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 203
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I EE ++ EL
Sbjct: 204 VNYE-PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
AK I L DP +R A++L+H
Sbjct: 263 AK--------------------------DFIRRLLVKDPKRRMXIAQSLEH 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 115/232 (49%), Gaps = 19/232 (8%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L+K++G G FG+VW S + VA+K LK S + L E L K H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFL---EEANLMKTLQHD 67
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + E+M L L S+ ++ ++ QI +G+ Y+ R
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS + KIADFGLA ++ EY +++ APE +
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIED----NEYTAREGAKFPIKWTAPEAIN 183
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGSPTEES 223
G + K ++W+ G+++ E++T+ + +PG D + + P E+
Sbjct: 184 F-GCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMEN 234
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 77
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 195
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 235
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 236 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 281
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 111/203 (54%), Gaps = 14/203 (6%)
Query: 5 TLMKQIGEGSFGKVWQA-IKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
T K IG G FG+V++ +K SG+ VAIK LK + L E + + ++H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NI++L+ + S+ + + EYM+ L + + + FS ++ I G+ Y+
Sbjct: 107 -NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLM 173
Y HRDL ++N+LV+++ + K++DFGL+ ++ P T Y T+ +++ APE +
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT-YTTSGGKIPIRWTAPEAISY 224
Query: 174 SGQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G++M E++T+
Sbjct: 225 R-KFTSASDVWSFGIVMWEVMTY 246
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 125/306 (40%), Gaps = 71/306 (23%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNH------- 60
+G+G+FG+V +A Y AIK ++ EE L+ L EV L +N+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 61 -----PNIVKLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N VK + L+ EY + L+ L+ + E QIL+ L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEV---------------DSCPPYTE 158
+Y+H QG HRDL N+ + +KI DFGLA V S T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGS 218
I T Y A E+L +G YN K+DM++LG+I E+I +P G + L K+
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKL------ 241
Query: 219 PTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEM----SLIELLCSWDPCKRPT 274
++ +FP P +D++M +I LL DP KRP
Sbjct: 242 -------------RSVSIEFP-----------PDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 275 AAEALQ 280
A L
Sbjct: 278 ARTLLN 283
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPY- 156
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 157 --TEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
T +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 NTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 5/201 (2%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQR--IYSWEECLNLKEVKCLRKINNHP 61
+ +K IG+GSFGKV A K + A+K L+++ + EE + E L K HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+V L +LYFV +Y++ R++CF E + + +I L Y+H
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 122 YFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
+RDL +N+L+ S I + DFGL E ++ + + T +Y APE+ L Y+
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV-LHKQPYDR 218
Query: 180 KVDMWALGLIMAELITFHPLF 200
VD W LG ++ E++ P F
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPF 239
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 40/291 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINN---H 60
Y L + IG+G F V + I +++G+ A+K + ++ L+ +++K I + H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 61 PNIVKLQELASENYRLYFVFEYMD----CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
P+IV+L E S + LY VFE+MD C ++ +SEA ++ QIL+ L Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 117 MHRQGYFHRDLISKNLLVSND----TIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEML 171
H HRD+ +L+++ +K+ FG+A ++ +S + T + APE++
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
Y VD+W G+I+ L++ F G T+E EG+
Sbjct: 208 KRE-PYGKPVDVWGCGVILFILLSGCLPFYG-----------------TKERLFEGIIKG 249
Query: 232 KAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
K YK Q +++S SA D L+ + DP +R T EAL HP
Sbjct: 250 K---YKMNPRQWSHIS---ESAKD----LVRRMLMLDPAERITVYEALNHP 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 131/291 (45%), Gaps = 40/291 (13%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRK 56
+ Y + +++G G F V + +K +G EY A K+R+ S ++ +EV LR+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
I HPNI+ L ++ + + E + L ++ K+ +E E + QIL G++
Sbjct: 72 IR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVH 129
Query: 116 YMHRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N++ V N IK+ DFG+A ++++ + T ++ APE+
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I EE ++ EL
Sbjct: 190 VNYE-PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 248
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
AK I L DP +R A++L+H
Sbjct: 249 AK--------------------------DFIRRLLVKDPKRRMXIAQSLEH 273
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 40/291 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINN---H 60
Y L + IG+G F V + I +++G+ A+K + ++ L+ +++K I + H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61 PNIVKLQELASENYRLYFVFEYMD----CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
P+IV+L E S + LY VFE+MD C ++ +SEA ++ QIL+ L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 117 MHRQGYFHRDLISKNLLVSND----TIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEML 171
H HRD+ +L+++ +K+ FG+A ++ +S + T + APE++
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELA 231
Y VD+W G+I+ L++ F G T+E EG+
Sbjct: 206 KRE-PYGKPVDVWGCGVILFILLSGCLPFYG-----------------TKERLFEGIIKG 247
Query: 232 KAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
K YK Q +++S SA D L+ + DP +R T EAL HP
Sbjct: 248 K---YKMNPRQWSHIS---ESAKD----LVRRMLMLDPAERITVYEALNHP 288
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVA--IKALKQRIYSWEECLNL--KEVKCLRKIN 58
Y + +++G G F V + +K +G EY A IK + R C +EV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPNI+ L ++ + + E + L ++ +K+ SE E ++ QIL G+NY+
Sbjct: 74 -HPNIITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVNYL 131
Query: 118 HRQGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H + H DL +N+++ + IK+ DFGLA E++ + T ++ APE++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L I EE +++ ELAK
Sbjct: 192 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
I L + KR T EAL+HP
Sbjct: 251 --------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 6 LMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNHPNIV 64
++ ++G+G+FGKV++A K++ A K + + S EE + + E+ L + HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCD-HPNIV 97
Query: 65 KLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
KL + L+ + E+ + +M ++ +E++++ C Q L LNY+H
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 124 HRDLISKNLLVSND-TIKIADFGL-AWEVDSCPPYTEYITTLQYRAPEMLLMSGQ----Y 177
HRDL + N+L + D IK+ADFG+ A +I T + APE+++ Y
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 178 NSKVDMWALGLIMAELITFHP 198
+ K D+W+LG+ + E+ P
Sbjct: 218 DYKADVWSLGITLIEMAEIEP 238
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEA------------ 101
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 102 ---EVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWE---VDSCP 154
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA + +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
T +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 6 LMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNHPNIV 64
++ ++G+G+FGKV++A K++ A K + + S EE + + E+ L + HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCD-HPNIV 97
Query: 65 KLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
KL + L+ + E+ + +M ++ +E++++ C Q L LNY+H
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 124 HRDLISKNLLVSND-TIKIADFGL-AWEVDSCPPYTEYITTLQYRAPEMLLMSGQ----Y 177
HRDL + N+L + D IK+ADFG+ A +I T + APE+++ Y
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 178 NSKVDMWALGLIMAELITFHP 198
+ K D+W+LG+ + E+ P
Sbjct: 218 DYKADVWSLGITLIEMAEIEP 238
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWE---VDSCP 154
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA + +D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
T +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 20/237 (8%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMD--CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM C L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGSPTEESWAEGL 228
G++ K D+W+ G+++ EL T + +PG + L ++ P E L
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 244
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ ++IADFGLA ++++ Y
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 73
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLA--WEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++N LV N +K+ADFGL+ D+ + +++ APE L + +++
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN-KFSI 192
Query: 180 KVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKF 238
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYRM 232
Query: 239 PKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 233 ERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 277
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG FG+V A K + VA+K LK + + E++ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 261 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 301
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG FG+V A K + VA+K LK + + E++ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 202 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 242
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 74
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 192
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 232
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 233 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 278
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG FG+V A K + VA+K LK + + E++ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 207 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 247
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 61
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLA 201
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 77
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 195
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 235
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 236 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 281
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 85
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 203
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDYR 243
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 244 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 289
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG FG+V A K + VA+K LK + + E++ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + EY NL + + R+ E
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 204 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 244
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 20/237 (8%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMD--CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM C L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGSPTEESWAEGL 228
G++ K D+W+ G+++ EL T + +PG + L ++ P E L
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESL 244
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 74
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 192
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEK-------------------DYR 232
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 233 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 278
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLN-LKEVKCLRKIN 58
++++ +K +G GSFG+V ++G + A+K L KQ++ ++ + L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
P + KL+ +N LY V EY R F E + + QI+ Y+H
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYRAPEMLL 172
+RDL +NL++ IK+ DFG A V C T +Y APE++L
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLF 200
G YN VD WALG+++ E+ +P F
Sbjct: 213 SKG-YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 36/288 (12%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ + ++G G+ V++ +K + + A+K LK+ + ++ + E+ L +++ HPNI
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLS-HPNI 110
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
+KL+E+ + V E + K +SE + + QIL+ + Y+H G
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 124 HRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +NLL + + +KIADFGL+ V+ T Y APE +L Y
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPE-ILRGCAYGP 229
Query: 180 KVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKF 238
+VDMW++G+I L+ F P + + +I N Y F
Sbjct: 230 EVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-------------------EYYF 270
Query: 239 PKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG 286
+ +SL +A D L+ L DP KR T +ALQHP G
Sbjct: 271 ISPWWDEVSL---NAKD----LVRKLIVLDPKKRLTTFQALQHPWVTG 311
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 77
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 195
Query: 179 SKVDMWALGLIMAELITF 196
K D+WA G+++ E+ T+
Sbjct: 196 IKSDVWAFGVLLWEIATY 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 16/229 (6%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIK---KQSGEYVAIKALK-----QRIYSWEECLNLKEVK 52
+E + L+K +G G++GKV+ K +G+ A+K LK Q+ + E ++V
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV- 111
Query: 53 CLRKINNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQIL 111
L I P +V L +L+ + +Y++ L +S R++ F+E EV+ + +I+
Sbjct: 112 -LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIV 169
Query: 112 QGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWE--VDSCPPYTEYITTLQYRAP 168
L ++H+ G +RD+ +N+L+ SN + + DFGL+ E D ++ T++Y AP
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 169 EMLLMSGQYNSK-VDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAI 216
+++ + K VD W+LG++M EL+T F E + +I I
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 278
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 45/298 (15%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 73
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLA----WEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N LV N +K+ADFGL+ + + P ++ +++ APE L + ++
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYN-KF 190
Query: 178 NSKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
+ K D+WA G+++ E+ T+ +PG + Q+Y++ Y
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDY 230
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ + +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 231 RMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 277
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 76
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 194
Query: 179 SKVDMWALGLIMAELITF 196
K D+WA G+++ E+ T+
Sbjct: 195 IKSDVWAFGVLLWEIATY 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 40/247 (16%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
E K +G G+FGKV A K VA+K LK++ S E + E+K + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDC---NLHQLMSNRKQCFSEAEVKN-------- 105
+ +H NIV L + + +Y +FEY C +L + ++++ FSE E++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEY--CCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 106 --------------WCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEV 150
+ +Q+ +G+ ++ + HRDL ++N+LV++ +KI DFGLA ++
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 151 DSCPPYTEYITT---LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF--HPLFPGTCE 205
S Y +++ APE L G Y K D+W+ G+++ E+ + +P +PG
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEIFSLGVNP-YPGIPV 280
Query: 206 DDQLYKI 212
D YK+
Sbjct: 281 DANFYKL 287
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 77
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 195
Query: 179 SKVDMWALGLIMAELITF 196
K D+WA G+++ E+ T+
Sbjct: 196 IKSDVWAFGVLLWEIATY 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 72
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 190
Query: 179 SKVDMWALGLIMAELITF 196
K D+WA G+++ E+ T+
Sbjct: 191 IKSDVWAFGVLLWEIATY 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + Y NL + + R+ E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 139/298 (46%), Gaps = 45/298 (15%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 74
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLA----WEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N LV N +K+ADFGL+ + + P ++ +++ APE L + ++
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--PIKWTAPESLAYN-KF 191
Query: 178 NSKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
+ K D+WA G+++ E+ T+ +PG + Q+Y++ Y
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLE-------------------KDY 231
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ + +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 232 RMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 72
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 190
Query: 179 SKVDMWALGLIMAELITFH-PLFPG 202
K D+WA G+++ E+ T+ +PG
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPG 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 279
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q S + QI + Y+ ++ +
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HR+L ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 397
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEK-------------------DYR 437
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 438 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 483
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 9/197 (4%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 77
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLA--WEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL ++N LV N +K+ADFGL+ D+ + +++ APE L + +++
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN-KFSI 196
Query: 180 KVDMWALGLIMAELITF 196
K D+WA G+++ E+ T+
Sbjct: 197 KSDVWAFGVLLWEIATY 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-------IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
+K TL K +GEG+FG+V A K + VA+K LK + + E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSE------------- 100
+ I H NI+ L +++ LY + Y NL + + R+ E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 101 --AEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT 157
++ + +Q+ +G+ Y+ Q HRDL ++N+LV+ N+ +KIADFGLA ++++ Y
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G++M E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 44/292 (15%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRI-------YSWEECLNLKEVKCLRK 56
Y + +++G G F V + +K +G A K +K+R S EE +EV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ +H N++ L ++ + + E + L ++ +K+ SE E ++ QIL G+N
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVN 129
Query: 116 YMHRQGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N+++ + IK+ DFGLA E++ + T ++ APE+
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I + EE ++ EL
Sbjct: 190 VNYE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
AK I L + KR T EAL+HP
Sbjct: 249 AK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 5/199 (2%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E +T + +IG+GSFG+V++ I + E VAIK + E +E+ L + ++ P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-P 77
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
I + ++ +L+ + EY+ L + E + +IL+GL+Y+H +
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGG-SALDLLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEV-DSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRD+ + N+L+S +K+ADFG+A ++ D+ ++ T + APE++ S Y+
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA-YDF 195
Query: 180 KVDMWALGLIMAELITFHP 198
K D+W+LG+ EL P
Sbjct: 196 KADIWSLGITAIELAKGEP 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG+ G+V A+ + + E VA+K + +R E N+K+ C+ K+ N
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 44/292 (15%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRI-------YSWEECLNLKEVKCLRK 56
Y + +++G G F V + +K +G A K +K+R S EE +EV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ +H N++ L ++ + + E + L ++ +K+ SE E ++ QIL G+N
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVN 129
Query: 116 YMHRQGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N+++ + IK+ DFGLA E++ + T ++ APE+
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I + EE ++ EL
Sbjct: 190 VNYE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
AK I L + KR T EAL+HP
Sbjct: 249 AK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++KI H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKIR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 44/292 (15%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRI-------YSWEECLNLKEVKCLRK 56
Y + +++G G F V + +K +G A K +K+R S EE +EV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ +H N++ L ++ + + E + L ++ +K+ SE E ++ QIL G+N
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVN 129
Query: 116 YMHRQGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N+++ + IK+ DFGLA E++ + T ++ APE+
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I + EE ++ EL
Sbjct: 190 VNYE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
AK I L + KR T EAL+HP
Sbjct: 249 AK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 44/292 (15%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRI-------YSWEECLNLKEVKCLRK 56
Y + +++G G F V + +K +G A K +K+R S EE +EV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ +H N++ L ++ + + E + L ++ +K+ SE E ++ QIL G+N
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVN 129
Query: 116 YMHRQGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N+++ + IK+ DFGLA E++ + T ++ APE+
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I EE +++ EL
Sbjct: 190 VNYE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
AK I L + KR T EAL+HP
Sbjct: 249 AK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 17/201 (8%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V+ + K+ VA+K LK+ EE L KE +++I HPN+V
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIK-HPNLV 91
Query: 65 KLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCF-----QILQGLNYMHR 119
+L + + Y V EYM L+ ++C E EV QI + Y+ +
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYG--NLLDYLRECNRE-EVTAVVLLYMATQISSAMEYLEK 148
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSG 175
+ + HRDL ++N LV N +K+ADFGL+ + + YT + +++ APE L +
Sbjct: 149 KNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN- 206
Query: 176 QYNSKVDMWALGLIMAELITF 196
++ K D+WA G+++ E+ T+
Sbjct: 207 TFSIKSDVWAFGVLLWEIATY 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 44/292 (15%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRI-------YSWEECLNLKEVKCLRK 56
Y + +++G G F V + +K +G A K +K+R S EE +EV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ +H N++ L ++ + + E + L ++ +K+ SE E ++ QIL G+N
Sbjct: 72 VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVN 129
Query: 116 YMHRQGYFHRDLISKNLLVSNDT-----IKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
Y+H + H DL +N+++ + IK+ DFGLA E++ + T ++ APE+
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLEL 230
+ + DMW++G+I L++ F G + + L I EE +++ EL
Sbjct: 190 VNYE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 231 AKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
AK I L + KR T EAL+HP
Sbjct: 249 AK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKINNHPNIVKL 66
+G+G F K ++ + E A K + + + E +++ E+ R + H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLA-HQHVVGF 104
Query: 67 QELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
+N ++ V E C L+ R++ +E E + + QI+ G Y+HR H
Sbjct: 105 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 125 RDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQYNSKVD 182
RDL NL ++ D +KI DFGLA +V+ + + T Y APE+L G ++ +VD
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVD 221
Query: 183 MWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQ 242
+W++G IM L+ P F +C + +I K + Y PK
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK-- 260
Query: 243 GNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG----------CLQVPS 292
N SLI+ + DP RPT E L F CL +P
Sbjct: 261 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPP 311
Query: 293 MSIDSCKMRLTPSAKK 308
L PS +K
Sbjct: 312 -RFSIAPSSLDPSNRK 326
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 126/299 (42%), Gaps = 52/299 (17%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKINNHPNIVKL 66
+G+G F K ++ + E A K + + + E +++ E+ R + H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLA-HQHVVGF 80
Query: 67 QELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
+N ++ V E C L+ R++ +E E + + QI+ G Y+HR H
Sbjct: 81 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 125 RDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQYNSKVD 182
RDL NL ++ D +KI DFGLA +V+ + + T Y APE+L G ++ +VD
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVD 197
Query: 183 MWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQ 242
+W++G IM L+ P F +C + +I K + Y PK
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK-- 236
Query: 243 GNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG----------CLQVP 291
N SLI+ + DP RPT E L F CL +P
Sbjct: 237 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 286
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ C+ + N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINAMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKINNHPNIVKL 66
+G+G F K ++ + E A K + + + E +++ E+ R + H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLA-HQHVVGF 82
Query: 67 QELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
+N ++ V E C L+ R++ +E E + + QI+ G Y+HR H
Sbjct: 83 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 125 RDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQYNSKVD 182
RDL NL ++ D +KI DFGLA +V+ + + T Y APE+L G ++ +VD
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEVD 199
Query: 183 MWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQ 242
+W++G IM L+ P F +C + +I K + Y PK
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK-- 238
Query: 243 GNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG----------CLQVPS 292
N SLI+ + DP RPT E L F CL +P
Sbjct: 239 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPP 289
Query: 293 MSIDSCKMRLTPSAKK 308
L PS +K
Sbjct: 290 X-FSIAPSSLDPSNRK 304
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKINNHPNIVKL 66
+G+G F K ++ + E A K + + + E +++ E+ R + H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLA-HQHVVGF 82
Query: 67 QELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
+N ++ V E C L+ R++ +E E + + QI+ G Y+HR H
Sbjct: 83 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 125 RDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQYNSKVD 182
RDL NL ++ D +KI DFGLA +V+ + + T Y APE+L G ++ +VD
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEVD 199
Query: 183 MWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQ 242
+W++G IM L+ P F +C + +I K + Y PK
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK-- 238
Query: 243 GNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG----------CLQVPS 292
N SLI+ + DP RPT E L F CL +P
Sbjct: 239 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPP 289
Query: 293 MSIDSCKMRLTPSAKK 308
L PS +K
Sbjct: 290 -RFSIAPSSLDPSNRK 304
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKINNHPNIVKL 66
+G+G F K ++ + E A K + + + E +++ E+ R + H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLA-HQHVVGF 106
Query: 67 QELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
+N ++ V E C L+ R++ +E E + + QI+ G Y+HR H
Sbjct: 107 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 125 RDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQYNSKVD 182
RDL NL ++ D +KI DFGLA +V+ + + T Y APE+L G ++ +VD
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFEVD 223
Query: 183 MWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQ 242
+W++G IM L+ P F +C + +I K + Y PK
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK-- 262
Query: 243 GNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG----------CLQVPS 292
N SLI+ + DP RPT E L F CL +P
Sbjct: 263 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPP 313
Query: 293 MSIDSCKMRLTPSAKK 308
L PS +K
Sbjct: 314 -RFSIAPSSLDPSNRK 328
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 47/301 (15%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK---QRIY--SWEEC--LNLKEVKCL 54
+KY IG G V + + + +G A+K ++ +R+ EE +E L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
R++ HP+I+ L + + ++ VF+ M K SE E ++ +L+ +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLM 173
+++H HRDL +N+L+ ++ I+++DFG + ++ E T Y APE+L
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKC 273
Query: 174 SGQ-----YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEG- 227
S Y +VD+WA G+I+ L+ P F W
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAGSPPF-----------------------WHRRQ 310
Query: 228 ---LELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
L + Y+F + ++ S + LI L DP R TA +ALQHP F
Sbjct: 311 ILMLRMIMEGQYQFSSPEWDDRSSTV-------KDLISRLLQVDPEARLTAEQALQHPFF 363
Query: 285 Q 285
+
Sbjct: 364 E 364
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLKEVKCLRKINNHPNIVKL 66
+G+G F K ++ + E A K + + + E +++ E+ R + H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLA-HQHVVGF 86
Query: 67 QELASENYRLYFVFEYMDCNLHQLMS--NRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
+N ++ V E C L+ R++ +E E + + QI+ G Y+HR H
Sbjct: 87 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 125 RDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLMSGQYNSKVD 182
RDL NL ++ D +KI DFGLA +V+ + + T Y APE+L G ++ +VD
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEVD 203
Query: 183 MWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQ 242
+W++G IM L+ P F +C + +I K + Y PK
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK-- 242
Query: 243 GNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQG----------CLQVPS 292
N SLI+ + DP RPT E L F CL +P
Sbjct: 243 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPP 293
Query: 293 MSIDSCKMRLTPSAKK 308
L PS +K
Sbjct: 294 -RFSIAPSSLDPSNRK 308
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 38/315 (12%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ M+ +G G+F +V+ ++ +G+ A+K +K+ + L E+ L+KI H NI
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE-NEIAVLKKIK-HENI 68
Query: 64 VKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V L+++ Y V + + +L + ++E + Q+L + Y+H G
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGG--ELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 122 YFHRDLISKNLLV----SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL +NLL N I I DFGL+ +++ + T Y APE+L Y
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYVAPEVLAQK-PY 184
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
+ VD W++G+I L+ +P F EE+ ++ E K Y+
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPF-------------------YEETESKLFEKIKEGYYE 225
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDS 297
F +++S SA D I L DP +R T +AL HP G + S
Sbjct: 226 FESPFWDDIS---ESAKD----FICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPS 278
Query: 298 CKMRLTPSAKKSGWK 312
+++ + KS W+
Sbjct: 279 VSLQIQKNFAKSKWR 293
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 66
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 67 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 181
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 182 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 70
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM+ L L + ++ + QI G+ Y+ R
Sbjct: 71 KLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 185
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 186 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 276
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HR+L ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 394
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEK-------------------DYR 434
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 435 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 480
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 62
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 63 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 177
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 178 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 217
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 322
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 323 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 437
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 438 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY-SWEECLNLKEVKCLRKINN 59
++ + +++ +G GSFG+V + +G Y A+K LK+ I ++ + + + + I
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HP I+++ + +++ + +Y++ + + Q F K + ++ L Y+H
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYI--TTLQYRAPEMLLMSGQ 176
+ +RDL +N+L+ N IKI DFG A V P Y T Y APE ++ +
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPE-VVSTKP 179
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA 215
YN +D W+ G+++ E++ + F + KI NA
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA 218
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 65 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 179
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 180 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 219
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 239
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 240 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 354
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 355 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T+ ++G G +G+V++ + K+ VA+K LK+ EE LKE +++I HPN+V
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEI-KHPNLV 318
Query: 65 KLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+L + + Y + E+M L L +Q + + QI + Y+ ++ +
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 123 FHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQYN 178
HR+L ++N LV N +K+ADFGL+ + + YT + +++ APE L + +++
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESLAYN-KFS 436
Query: 179 SKVDMWALGLIMAELITFH-PLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
K D+WA G+++ E+ T+ +PG + Q+Y++ Y+
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPG-IDLSQVYELLEK-------------------DYR 476
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMS 294
+ +G + L+ W+P RP+ AE H F+ Q S+S
Sbjct: 477 MERPEG---------CPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSIS 522
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 239
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 240 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 354
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 355 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWE---VDSCP 154
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA + +D
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
T +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 239
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 240 KLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 354
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 355 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L K++G G FG+VW A + + VA+K +K S E L E ++ + H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFL--AEANVMKTLQ-HD 70
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+VKL + ++ +Y + E+M L L S+ ++ ++ QI +G+ ++ +
Sbjct: 71 KLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS + KIADFGLA ++ EY +++ APE +
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIED----NEYTAREGAKFPIKWTAPEAIN 185
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGSPTEESWAEGL 228
G + K D+W+ G+++ E++T+ + +PG + + + P E+ E L
Sbjct: 186 F-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 241
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 8/218 (3%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK-EVKCLRKINNHP 61
Y L +G G+FGKV + +G VA+K L +Q+I S + ++ E++ L K+ HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL-KLFRHP 76
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+I+KL ++ S ++ V EY+ + N + E E + QIL G++Y HR
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHR 134
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRDL +N+L+ ++ KIADFGL+ + + Y APE++
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAI 216
+VD+W+ G+I+ L+ F KIC+ I
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI 232
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 12/217 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
Y HRDL + N+LV + + K+ADFGLA ++ +++ APE L G+
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY-GR 191
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
+ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 74 KLVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ EY +++ APE L
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEYTARQGAKFPIKWTAPEAAL 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 189 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 72 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 129
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 189
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 190 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 229
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 230 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
T+ + IG G FG+V K G+ VAIK LK + L E + + + HP
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 83
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI+ L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCP--PYTEYITTLQYR--APEMLLMSG 175
GY HRDL ++N+L++++ + K++DFGL+ ++ P YT + R APE +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR- 202
Query: 176 QYNSKVDMWALGLIMAELITF 196
++ S D+W+ G++M E++++
Sbjct: 203 KFTSASDVWSYGIVMWEVVSY 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 72 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 129
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 189
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 190 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 229
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 230 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ + K+ N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLN 63
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ + K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 5 TLMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
T +++IG G FG V W K VAIK +++ S E+ + +E + + K++ H
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFI--EEAEVMMKLS-H 61
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V+L + E + VFE+M+ L + ++ F+ + C + +G+ Y+
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEV--DSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL ++N LV N IK++DFG+ V D T +++ +PE+ S +
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-R 180
Query: 177 YNSKVDMWALGLIMAELIT 195
Y+SK D+W+ G++M E+ +
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S TE T Y AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 187 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 229
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 230 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 283 TKVPQTPLHTSRV 295
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L K++G G FG+VW A + + VA+K +K S E L E ++ + H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFL--AEANVMKTLQ-HD 243
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+VKL + ++ +Y + E+M L L S+ ++ ++ QI +G+ ++ +
Sbjct: 244 KLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS + KIADFGLA ++ EY +++ APE +
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIED----NEYTAREGAKFPIKWTAPEAIN 358
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGSPTEESWAEGL 228
G + K D+W+ G+++ E++T+ + +PG + + + P E+ E L
Sbjct: 359 F-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 414
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 139/324 (42%), Gaps = 46/324 (14%)
Query: 3 KYTLMKQIGEGSFGKVWQAIK-KQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-NH 60
+Y ++ +GEG+FGKV + I K G +VA+K +K E + E++ L +N
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS--EIQVLEHLNTTD 72
Query: 61 PN----IVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLN 115
PN V++ E + + VFE + + + + N F ++ +QI + +N
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 116 YMHRQGYFHRDLISKNLL--------------------VSNDTIKIADFGLAWEVDSCPP 155
++H H DL +N+L + N IK+ DFG A D
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--H 190
Query: 156 YTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA 215
++ ++T YRAPE++L G ++ D+W++G I+ E +FP + L +
Sbjct: 191 HSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 216 IGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSA--------------NDDEMSLI 261
+G + + + H + + ++ + A ++ LI
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309
Query: 262 ELLCSWDPCKRPTAAEALQHPLFQ 285
+ + +DP KR T EAL+HP F
Sbjct: 310 QKMLEYDPAKRITLREALKHPFFD 333
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINN 59
+E + L++ +GEG++G+V A+ + + E VA+K + +R E N+K+ + K+ N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXINKMLN 62
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQ--CFSEAEVKNWCFQILQGLNYM 117
H N+VK E Y EY C+ +L + E + + + Q++ G+ Y+
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEY--CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 118 HRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM 173
H G HRD+ +NLL+ D +KI+DFGLA + + TL Y APE+L
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 174 SGQYNSKVDMWALGLIMAELIT 195
+ VD+W+ G+++ ++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 126/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 18/231 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L K++G G FG+VW A + + VA+K +K S E L E ++ + H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFL--AEANVMKTLQ-HD 237
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+VKL + ++ +Y + E+M L L S+ ++ ++ QI +G+ ++ +
Sbjct: 238 KLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
+ Y HRDL + N+LVS + KIADFGLA P +++ APE + G +
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP--------IKWTAPEAINF-GSFT 347
Query: 179 SKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGSPTEESWAEGL 228
K D+W+ G+++ E++T+ + +PG + + + P E+ E L
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL 398
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 70
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM+ L L + ++ + QI G+ Y+ R
Sbjct: 71 KLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGLA ++ E+ +++ APE L
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLARLIED----NEWTARQGAKFPIKWTAPEAAL 185
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 186 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 45/327 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
++ Y + +++G G+FG V + ++ +G A K + S +E + KE++ + + H
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTM-SVLRH 107
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V L + ++ + ++E+M L + +++ SE E + Q+ +GL +MH
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 120 QGYFHRDLISKNLLVS---NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS-- 174
Y H DL +N++ + ++ +K+ DFGL +D T ++ APE+
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
G Y DMW++G++ L++ F G +D+ L + + W
Sbjct: 228 GYY---TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DW---------- 267
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP-LFQGCL----- 288
N ++D I L DP R T +AL+HP L G
Sbjct: 268 ---------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 318
Query: 289 QVPSMSIDSCKMRLTPSAKKSGWKAKL 315
Q+PS K+R + K W L
Sbjct: 319 QIPSSRY--TKIRDSIKTKYDAWPEPL 343
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 45/327 (13%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
++ Y + +++G G+FG V + ++ +G A K + S +E + KE++ + + H
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTM-SVLRH 213
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V L + ++ + ++E+M L + +++ SE E + Q+ +GL +MH
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 120 QGYFHRDLISKNLLVS---NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS-- 174
Y H DL +N++ + ++ +K+ DFGL +D T ++ APE+
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
G Y DMW++G++ L++ F G +D+ L + + W
Sbjct: 334 GYY---TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DW---------- 373
Query: 235 GYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP-LFQGCL----- 288
N ++D I L DP R T +AL+HP L G
Sbjct: 374 ---------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424
Query: 289 QVPSMSIDSCKMRLTPSAKKSGWKAKL 315
Q+PS K+R + K W L
Sbjct: 425 QIPSSRY--TKIRDSIKTKYDAWPEPL 449
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 233
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSG-EYVAIKALKQRIYSWEECLNL----KEVKCLRKIN 58
Y +++G G F V + +K +G +Y A K+R S ++ +EV L++I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
HPN++ L E+ + + E + L ++ K+ +E E + QIL G+ Y+
Sbjct: 73 -HPNVITLHEVYENKTDVILIGELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130
Query: 118 HRQGYFHRDLISKNLL-----VSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
H H DL +N++ V IKI DFGLA ++D + T ++ APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ DMW++G+I L++ F G + + L +
Sbjct: 191 YE-PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------------------- 230
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
A Y+F +N S L A D I L DP KR T ++LQHP
Sbjct: 231 AVNYEFEDEYFSNTSAL---AKD----FIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 201 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 241
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 200 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 240
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 110/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 69
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E+ + + AP
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 187 ESLTES-KFSVASDVWSFGVVLYELFTY 213
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 197 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 237
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 38/287 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK-EVKCLRKINNHP 61
Y L +G G+FGKV + +G VA+K L +Q+I S + +K E++ L K+ HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHP 71
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
+I+KL ++ S + V EY+ L + + E E + QIL ++Y HR
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV-EEMEARRLFQQILSAVDYCHRH 130
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +N+L+ ++ KIADFGL+ + + + Y APE++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
+VD+W+ G+I+ L +C + P ++ L F
Sbjct: 191 EVDIWSCGVILYAL------------------LCGTL--PFDDEHVPTL---------FK 221
Query: 240 KLQGNNLSLLIPS-ANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
K++G IP N +L+ + DP KR T + +H F+
Sbjct: 222 KIRGG--VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE----CLNLKEVKCLRK 56
M +++ + IG G FG+V+ K +G+ A+K L ++ ++ LN + + L
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ P IV + +L F+ + M+ +LH +S FSEA+++ + +I+ GL
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLE 305
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
+MH + +RDL N+L+ + ++I+D GLA + P+ + T Y APE+L
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
Y+S D ++LG ++ +L+ H F
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE----CLNLKEVKCLRK 56
M +++ + IG G FG+V+ K +G+ A+K L ++ ++ LN + + L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ P IV + +L F+ + M+ +LH +S FSEA+++ + +I+ GL
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLE 306
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
+MH + +RDL N+L+ + ++I+D GLA + P+ + T Y APE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
Y+S D ++LG ++ +L+ H F
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 249 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 289
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 122/306 (39%), Gaps = 71/306 (23%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNH------- 60
+G+G+FG+V +A Y AIK ++ EE L+ L EV L +N+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 61 -----PNIVKLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
N VK + L+ EY + L+ L+ + E QIL+ L
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEV---------------DSCPPYTE 158
+Y+H QG HR+L N+ + +KI DFGLA V S T
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGS 218
I T Y A E+L +G YN K+D ++LG+I E I +P G + L K+
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILKKL------ 241
Query: 219 PTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDD----EMSLIELLCSWDPCKRPT 274
++ +FP P +D+ E +I LL DP KRP
Sbjct: 242 -------------RSVSIEFP-----------PDFDDNKXKVEKKIIRLLIDHDPNKRPG 277
Query: 275 AAEALQ 280
A L
Sbjct: 278 ARTLLN 283
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 22/235 (9%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
T +K++G G FG V K G+Y VAIK +K+ S +E + +E K + ++ H +
Sbjct: 27 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLS-HEKL 81
Query: 64 VKLQELASENYRLYFVFEYM--DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + ++ ++ + EYM C L+ L R + F ++ C + + + Y+ +
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYR-APEMLLMSGQYNS 179
+ HRDL ++N LV++ +K++DFGL+ V + + R +P +LM +++S
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
K D+WA G++M E+ + + + N S T E A+GL L + H
Sbjct: 201 KSDIWAFGVLMWEIYSLGKM--------PYERFTN---SETAEHIAQGLRLYRPH 244
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE----CLNLKEVKCLRK 56
M +++ + IG G FG+V+ K +G+ A+K L ++ ++ LN + + L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ P IV + +L F+ + M+ +LH +S FSEA+++ + +I+ GL
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLE 306
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
+MH + +RDL N+L+ + ++I+D GLA + P+ + T Y APE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
Y+S D ++LG ++ +L+ H F
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE----CLNLKEVKCLRK 56
M +++ + IG G FG+V+ K +G+ A+K L ++ ++ LN + + L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
+ P IV + +L F+ + M+ +LH +S FSEA+++ + +I+ GL
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLE 306
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS 174
+MH + +RDL N+L+ + ++I+D GLA + P+ + T Y APE+L
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
Y+S D ++LG ++ +L+ H F
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 26/237 (10%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
T +K++G G FG V K G+Y VAIK +K+ S +E + +E K + ++ H +
Sbjct: 27 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLS-HEKL 81
Query: 64 VKLQELASENYRLYFVFEYM--DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + ++ ++ + EYM C L+ L R + F ++ C + + + Y+ +
Sbjct: 82 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQY 177
+ HRDL ++N LV++ +K++DFGL+ V YT + + +++ PE+L+ S ++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS-KF 198
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+SK D+WA G++M E+ + + + N S T E A+GL L + H
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKM--------PYERFTN---SETAEHIAQGLRLYRPH 244
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 10 IGE-GSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNHPNIVKLQ 67
IGE G FGKV++A K++ A K + + S EE + + E+ L + HPNIVKL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCD-HPNIVKLL 73
Query: 68 ELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRD 126
+ L+ + E+ + +M ++ +E++++ C Q L LNY+H HRD
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 127 LISKNLLVSND-TIKIADFGLAWEVDSC--PPYTEYITTLQYRAPEMLLMSGQ----YNS 179
L + N+L + D IK+ADFG++ + +I T + APE+++ Y+
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 180 KVDMWALGLIMAELITFHP 198
K D+W+LG+ + E+ P
Sbjct: 194 KADVWSLGITLIEMAEIEP 212
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 35/305 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
EKY + + +G G FG V + ++ S + K +K + ++ L KE+ L I H
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK--VKGTDQVLVKKEISIL-NIARHR 61
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI+ L E L +FE++ ++ + ++ +E E+ ++ Q+ + L ++H
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 121 GYFHRDLISKNLLVS---NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
H D+ +N++ + TIKI +FG A ++ + T +Y APE +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE-VHQHDVV 180
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYK 237
++ DMW+LG ++ L++ F + I NA + EE++ E
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE----------- 229
Query: 238 FPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP-LFQGCLQVPSMSID 296
+S+ + M ++ L + R TA+EALQHP L Q +V + I
Sbjct: 230 --------ISI-------EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIR 274
Query: 297 SCKMR 301
+ K R
Sbjct: 275 TLKHR 279
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 26/237 (10%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
T +K++G G FG V K G+Y VAIK +K+ S +E + +E K + ++ H +
Sbjct: 18 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLS-HEKL 72
Query: 64 VKLQELASENYRLYFVFEYM--DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + ++ ++ + EYM C L+ L R + F ++ C + + + Y+ +
Sbjct: 73 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQY 177
+ HRDL ++N LV++ +K++DFGL+ V YT + + +++ PE+L+ S ++
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS-KF 189
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+SK D+WA G++M E+ + + + N S T E A+GL L + H
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKM--------PYERFTN---SETAEHIAQGLRLYRPH 235
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 26/237 (10%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
T +K++G G FG V K G+Y VAIK +K+ S +E + +E K + ++ H +
Sbjct: 12 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLS-HEKL 66
Query: 64 VKLQELASENYRLYFVFEYM--DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + ++ ++ + EYM C L+ L R + F ++ C + + + Y+ +
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQY 177
+ HRDL ++N LV++ +K++DFGL+ V YT + + +++ PE+L+ S ++
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS-KF 183
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+SK D+WA G++M E+ + + + N S T E A+GL L + H
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKM--------PYERFTN---SETAEHIAQGLRLYRPH 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 26/237 (10%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
T +K++G G FG V K G+Y VAIK +K+ S +E + +E K + ++ H +
Sbjct: 11 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLS-HEKL 65
Query: 64 VKLQELASENYRLYFVFEYM--DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + ++ ++ + EYM C L+ L R + F ++ C + + + Y+ +
Sbjct: 66 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQY 177
+ HRDL ++N LV++ +K++DFGL+ V YT + + +++ PE+L+ S ++
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS-KF 182
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+SK D+WA G++M E+ + + + N S T E A+GL L + H
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKM--------PYERFTN---SETAEHIAQGLRLYRPH 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNHPN 62
Y + + +GEGSFGKV A ++ + VA+K + +++ + + ++ K+ HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
I+KL ++ + + V EY L + +K+ +E E + + QI+ + Y HR
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 123 FHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSKV 181
HRDL +NLL+ ++ +KIADFGL+ + + Y APE++ +V
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEV 189
Query: 182 DMWALGLIM 190
D+W+ G+++
Sbjct: 190 DVWSCGIVL 198
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 2 EKYTLMKQIGEGSFGKV--WQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCL 54
++ L K +GEG+FG+V +AI K VA+K LK + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRK---------------QCF 98
+ I H NI+ L +++ LY + EY NL + + R+ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT 157
S ++ + +Q+ +G+ Y+ + HRDL ++N+LV+ D + KIADFGLA ++ Y
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 158 EYIT---TLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE L Y + D+W+ G+++ E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 26/237 (10%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
T +K++G G FG V K G+Y VAIK +K+ S +E + +E K + ++ H +
Sbjct: 7 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLS-HEKL 61
Query: 64 VKLQELASENYRLYFVFEYM--DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + ++ ++ + EYM C L+ L R + F ++ C + + + Y+ +
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT---LQYRAPEMLLMSGQY 177
+ HRDL ++N LV++ +K++DFGL+ V YT + + +++ PE+L+ S ++
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYS-KF 178
Query: 178 NSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
+SK D+WA G++M E+ + + + N S T E A+GL L + H
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKM--------PYERFTN---SETAEHIAQGLRLYRPH 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 5 TLMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
T +++IG G FG V W K VAIK +++ S E+ + +E + + K++ H
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFI--EEAEVMMKLS-H 64
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V+L + E + VFE+M+ L + ++ F+ + C + +G+ Y+
Sbjct: 65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 124
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEV--DSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL ++N LV N IK++DFG+ V D T +++ +PE+ S +
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-R 183
Query: 177 YNSKVDMWALGLIMAELIT 195
Y+SK D+W+ G++M E+ +
Sbjct: 184 YSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 5 TLMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
T +++IG G FG V W K VAIK +++ S E+ + +E + + K++ H
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFI--EEAEVMMKLS-H 61
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V+L + E + VFE+M+ L + ++ F+ + C + +G+ Y+
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEV--DSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL ++N LV N IK++DFG+ V D T +++ +PE+ S +
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-R 180
Query: 177 YNSKVDMWALGLIMAELIT 195
Y+SK D+W+ G++M E+ +
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIY---SWEECLNLK----EVKCL 54
+KY+ M +G G+FG VW A+ K+ + V +K +K+ W E L E+ L
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 55 RKINNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCF-QILQG 113
++ H NI+K+ ++ V E L + + + ++ F Q++
Sbjct: 84 SRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 114 LNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ Y+ + HRD+ +N++++ D TIK+ DFG A ++ + + T++Y APE+L+
Sbjct: 143 VGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLM 202
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +++MW+LG+ + L+
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLV 224
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 5 TLMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
T +++IG G FG V W K VAIK +++ S E+ + +E + + K++ H
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFI--EEAEVMMKLS-H 59
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V+L + E + VFE+M+ L + ++ F+ + C + +G+ Y+
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEV--DSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL ++N LV N IK++DFG+ V D T +++ +PE+ S +
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-R 178
Query: 177 YNSKVDMWALGLIMAELIT 195
Y+SK D+W+ G++M E+ +
Sbjct: 179 YSSKSDVWSFGVLMWEVFS 197
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFL--QEAQVMKKLR-HE 240
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE +Y V EYM L L + ++ + QI G+ Y+ R
Sbjct: 241 KLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
Y HRDL + N+LV + + K+ADFGL ++ EY +++ APE L
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLGRLIED----NEYTARQGAKFPIKWTAPEAAL 355
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
G++ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 356 Y-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 395
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
K IG G G+V + G+ VAIKALK + L E + + + HPNI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD-HPNII 113
Query: 65 KLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
+L+ + + V EYM+ +L + F+ ++ + G+ Y+ GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 124 HRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N+LV SN K++DFGL+ ++ P Y TT +++ APE + +
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD-AAYTTTGGKIPIRWTAPEAIAFR-TF 231
Query: 178 NSKVDMWALGLIMAELITF 196
+S D+W+ G++M E++ +
Sbjct: 232 SSASDVWSFGVVMWEVLAY 250
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 210 SAXKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 38/287 (13%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK-EVKCLRKINNHP 61
Y L +G G+FGKV + +G VA+K L +Q+I S + +K E++ L K+ HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHP 71
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
+I+KL ++ S + V EY+ L + + E E + QIL ++Y HR
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV-EEMEARRLFQQILSAVDYCHRH 130
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
HRDL +N+L+ ++ KIADFGL+ + + Y APE++
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFP 239
+VD+W+ G+I+ L +C + P ++ L F
Sbjct: 191 EVDIWSCGVILYAL------------------LCGTL--PFDDEHVPTL---------FK 221
Query: 240 KLQGNNLSLLIPS-ANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
K++G IP N +L+ + DP KR T + +H F+
Sbjct: 222 KIRGG--VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 110/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 70
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HR+L ++N+LV N+ +KI DFGL P EY + + AP
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLT---KVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 188 ESLTES-KFSVASDVWSFGVVLYELFTY 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 22/235 (9%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEY-VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
T +K++G G FG V K G+Y VAIK +K+ S +E + +E K + ++ H +
Sbjct: 12 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLS-HEKL 66
Query: 64 VKLQELASENYRLYFVFEYM--DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
V+L + ++ ++ + EYM C L+ L R + F ++ C + + + Y+ +
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 122 YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYR-APEMLLMSGQYNS 179
+ HRDL ++N LV++ +K++DFGL+ V + + R +P +LM +++S
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 180 KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAH 234
K D+WA G++M E+ + + + N S T E A+GL L + H
Sbjct: 186 KSDIWAFGVLMWEIYSLGKM--------PYERFTN---SETAEHIAQGLRLYRPH 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 189 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 231
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 232 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 285 TKVPQTPLHTSRV 297
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 5 TLMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
T +++IG G FG V W K VAIK +K+ S ++ + +E + + K++ H
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIKEGSMSEDDFI--EEAEVMMKLS-H 81
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V+L + E + VFE+M+ L + ++ F+ + C + +G+ Y+
Sbjct: 82 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 141
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEV--DSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL ++N LV N IK++DFG+ V D T +++ +PE+ S +
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-R 200
Query: 177 YNSKVDMWALGLIMAELIT 195
Y+SK D+W+ G++M E+ +
Sbjct: 201 YSSKSDVWSFGVLMWEVFS 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
+ + + +G+GSFGKV + +K + E A+K LK+ + ++ + + E + L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQC--FSEAEVKNWCFQILQGLNY 116
P + +L RLYFV EY+ N LM + +Q F E + +I GL +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYV--NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMS 174
+ +G +RDL N+++ ++ IKIADFG+ E + + T Y APE++
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKI 212
Y VD WA G+++ E++ F G ED+ I
Sbjct: 197 -PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ +GEG FGKV + +GE VA+K+LK KE++ LR + H N
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HEN 84
Query: 63 IVKLQELASEN--YRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
IVK + + +E+ + + E++ +L + + K + + + QI +G++Y+
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEML 171
+ Y HRDL ++N+LV S +KI DFGL +++ E T R APE L
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET---DKEXXTVKDDRDSPVFWYAPECL 201
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
+ S Y + D+W+ G+ + EL+T+
Sbjct: 202 MQSKFYIAS-DVWSFGVTLHELLTY 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 187 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 229
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 230 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 283 TKVPQTPLHTSRV 295
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 74
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 75 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 195 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 237
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 238 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 291 TKVPQTPLHTSRV 303
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 67
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 68 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 188 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 230
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 231 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 284 TKVPQTPLHTSRV 296
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 72
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 73 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 193 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 235
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 236 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 289 TKVPQTPLHTSRV 301
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 73
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 74 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 194 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 236
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 237 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 290 TKVPQTPLHTSRV 302
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 82
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 83 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 202
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 203 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 245
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 246 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 299 TKVPQTPLHTSRV 311
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 10 IGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG+V + K G+ VAIK LK + L E + + HPNI++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 80
Query: 67 QELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHR 125
+ + + + + + E+M+ L + F+ ++ I G+ Y+ Y HR
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 140
Query: 126 DLISKNLLVSNDTI-KIADFGLAW---EVDSCPPYTEYI---TTLQYRAPEMLLMSGQYN 178
DL ++N+LV+++ + K++DFGL+ E S P YT + +++ APE + ++
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR-KFT 199
Query: 179 SKVDMWALGLIMAELITF 196
S D W+ G++M E+++F
Sbjct: 200 SASDAWSYGIVMWEVMSF 217
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQEL 69
+G+G++G V+ + +AIK + +R + + L+ E L K H NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQYLGS 87
Query: 70 ASEN-YRLYFVFEYMDCNLHQLMSNRKQCFSEAE--VKNWCFQILQGLNYMHRQGYFHRD 126
SEN + F+ + +L L+ ++ + E + + QIL+GL Y+H HRD
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 127 LISKNLLVS--NDTIKIADFGLAWEVDSCPPYTEYIT-TLQYRAPEMLLMSGQ-YNSKVD 182
+ N+L++ + +KI+DFG + + P TE T TLQY APE++ + Y D
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 183 MWALGLIMAELITFHPLF 200
+W+LG + E+ T P F
Sbjct: 208 IWSLGCTIIEMATGKPPF 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 76
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 194 ESLTES-KFSVASDVWSFGVVLYELFTY 220
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
K IG G G+V + G+ VAIKALK + L E + + + HPNI+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD-HPNII 113
Query: 65 KLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
+L+ + + V EYM+ +L + F+ ++ + G+ Y+ GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 124 HRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITT----LQYRAPEMLLMSGQYN 178
HRDL ++N+LV SN K++DFGL+ ++ P T +++ APE + ++
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR-TFS 232
Query: 179 SKVDMWALGLIMAELITF 196
S D+W+ G++M E++ +
Sbjct: 233 SASDVWSFGVVMWEVLAY 250
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ +GEG FGKV + +GE VA+K+LK KE++ LR + H N
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HEN 72
Query: 63 IVKLQELASEN--YRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
IVK + + +E+ + + E++ +L + + K + + + QI +G++Y+
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEML 171
+ Y HRDL ++N+LV S +KI DFGL +++ E T R APE L
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET---DKEXXTVKDDRDSPVFWYAPECL 189
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
+ S Y + D+W+ G+ + EL+T+
Sbjct: 190 MQSKFYIAS-DVWSFGVTLHELLTY 213
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQEL 69
+G+G++G V+ + +AIK + +R + + L+ E L K H NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQYLGS 73
Query: 70 ASEN-YRLYFVFEYMDCNLHQLMSNRKQCFSEAE--VKNWCFQILQGLNYMHRQGYFHRD 126
SEN + F+ + +L L+ ++ + E + + QIL+GL Y+H HRD
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 127 LISKNLLVS--NDTIKIADFGLAWEVDSCPPYTEYIT-TLQYRAPEMLLMSGQ-YNSKVD 182
+ N+L++ + +KI+DFG + + P TE T TLQY APE++ + Y D
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 183 MWALGLIMAELITFHPLF 200
+W+LG + E+ T P F
Sbjct: 194 IWSLGCTIIEMATGKPPF 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 8/205 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
HP VKL ++ +LYF Y + F E + + +I+ L Y+H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMSG 175
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 176 QYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 211 ASKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 73
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 191 ESLTES-KFSVASDVWSFGVVLYELFTY 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 87
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 205 ESLTES-KFSVASDVWSFGVVLYELFTY 231
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 100
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 218 ESLTES-KFSVASDVWSFGVVLYELFTY 244
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 75
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 193 ESLTES-KFSVASDVWSFGVVLYELFTY 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECL--NLKEVKCLRKIN 58
+ + + +G+GSFGKV + +K + E A+K LK+ + ++ + + E + L
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQC--FSEAEVKNWCFQILQGLNY 116
P + +L RLYFV EY+ N LM + +Q F E + +I GL +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYV--NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMS 174
+ +G +RDL N+++ ++ IKIADFG+ E + + T Y APE++
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKI 212
Y VD WA G+++ E++ F G ED+ I
Sbjct: 518 -PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 87
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 205 ESLTES-KFSVASDVWSFGVVLYELFTY 231
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 74
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 192 ESLTES-KFSVASDVWSFGVVLYELFTY 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 67
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 185 ESLTES-KFSVASDVWSFGVVLYELFTY 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 72
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 190 ESLTES-KFSVASDVWSFGVVLYELFTY 216
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 93
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 213 SACKSS-DLWALGCIIYQLVAGLPPF 237
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L+K IG G+FG KQ+ E VA+K + +R +E + +E+ R + HP
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDENVK-REIINHRSL-RHP 75
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV+ +E+ L V EY L + + N + FSE E + + Q++ G++Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYAHAM 134
Query: 121 GYFHRDLISKNLLVSND---TIKIADFGL--AWEVDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N L+ +KIADFG A + S P + T Y APE+LL
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAVGTPAYIAPEVLLKK- 191
Query: 176 QYNSKV-DMWALGLIM 190
+Y+ KV D+W+ G+ +
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 69
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 187 ESLTES-KFSVASDVWSFGVVLYELFTY 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 68
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 186 ESLTES-KFSVASDVWSFGVVLYELFTY 212
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 118
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 239 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 281
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 282 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 335 TKVPQTPLHTSRV 347
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 72
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + E++ +L + + K+ ++ + QI +G+ Y
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 190 ESLTES-KFSVASDVWSFGVVLYELFTY 216
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 189 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 231
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 232 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 285 TKVPQTPLHTSRV 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 109/208 (52%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 69
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + K+ ++ + QI +G+ Y
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 187 ESLTES-KFSVASDVWSFGVVLYELFTY 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 44/313 (14%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 112
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 233 E-VLGPEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 275
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 276 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 329 TKVPQTPLHTSRV 341
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 137/324 (42%), Gaps = 46/324 (14%)
Query: 3 KYTLMKQIGEGSFGKVWQAIK-KQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-NH 60
+Y ++ +GEG+FGKV + I K G +VA+K +K E + E++ L +N
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS--EIQVLEHLNTTD 72
Query: 61 PN----IVKLQELASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLN 115
PN V++ E + + VFE + + + + N F ++ +QI + +N
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 116 YMHRQGYFHRDLISKNLL--------------------VSNDTIKIADFGLAWEVDSCPP 155
++H H DL +N+L + N IK+ DFG A D
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--H 190
Query: 156 YTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA 215
++ + YRAPE++L G ++ D+W++G I+ E +FP + L +
Sbjct: 191 HSTLVXXRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 216 IGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSA--------------NDDEMSLI 261
+G + + + H + + ++ + A ++ LI
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309
Query: 262 ELLCSWDPCKRPTAAEALQHPLFQ 285
+ + +DP KR T EAL+HP F
Sbjct: 310 QKMLEYDPAKRITLREALKHPFFD 333
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L ++G+G FG+VW + VAIK LK S E L +E + ++K+ H
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL--QEAQVMKKLR-HE 63
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + SE + V EYM L L + ++ + QI G+ Y+ R
Sbjct: 64 KLVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 120 QGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
Y HRDL + N+LV + + K+ADFGLA ++ +++ APE L G+
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY-GR 181
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKI 212
+ K D+W+ G+++ EL T + +PG + L ++
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 218
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPF 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 91
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 211 SACKSS-DLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPF 232
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
+ IG G FG+V K G+ VAIK LK + L E + + + HPN+V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVV 107
Query: 65 KLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L+ + + + V E+M+ L + F+ ++ I G+ Y+ GY
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 124 HRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N+LV+++ + K++DFGL+ ++ P Y TT +++ APE + ++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV-YTTTGGKIPVRWTAPEAIQYR-KF 225
Query: 178 NSKVDMWALGLIMAELITF 196
S D+W+ G++M E++++
Sbjct: 226 TSASDVWSYGIVMWEVMSY 244
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 91
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 211 SACKSS-DLWALGCIIYQLVAGLPPF 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 210 SACKSS-DLWALGCIIYQLVAGLPPF 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 68
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 188 SACKSS-DLWALGCIIYQLVAGLPPF 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L+K IG G+FG KQS E VA+K +++ + N+K + HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER---GEKIAANVKREIINHRSLRHP 75
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV+ +E+ L V EY L + + N + FSE E + + Q++ G++Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAM 134
Query: 121 GYFHRDLISKNLLVSND---TIKIADFGLAWE--VDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N L+ +KI DFG + + S P T + T Y APE+LL
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKK- 191
Query: 176 QYNSKV-DMWALGLIM 190
+Y+ KV D+W+ G+ +
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 95
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 215 SACKSS-DLWALGCIIYQLVAGLPPF 239
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYS--WEECLNLKEVKCLRKINNH 60
+ TL + IG G FGKV++A G+ VA+KA + + N+++ L + H
Sbjct: 8 ELTLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
PNI+ L+ + + L V E+ L++++S ++ + NW QI +G+NY+H
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR--IPPDILVNWAVQIARGMNYLHD 123
Query: 120 QG---YFHRDLISKNLLV---------SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRA 167
+ HRDL S N+L+ SN +KI DFGLA E + + A
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA-GAYAWMA 182
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPG 202
PE++ S ++ D+W+ G+++ EL+T F G
Sbjct: 183 PEVIRAS-MFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L+K IG G+FG KQS E VA+K + +R +E N+K + HP
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDE--NVKREIINHRSLRHP 74
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV+ +E+ L V EY L + + N + FSE E + + Q++ G++Y H
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAM 133
Query: 121 GYFHRDLISKNLLVSND---TIKIADFGLAWE--VDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N L+ +KI DFG + + S P T + T Y APE+LL
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKK- 190
Query: 176 QYNSKV-DMWALGLIM 190
+Y+ KV D+W+ G+ +
Sbjct: 191 EYDGKVADVWSCGVTL 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 65
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 185 SACKSS-DLWALGCIIYQLVAGLPPF 209
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 72
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCE 205
S D+WALG I+ +L+ P F E
Sbjct: 192 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 77 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYI 160
+I G+ Y++ + + HRDL ++N +V++D T+KI DFG+ E D + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 194 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 76 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYI 160
+I G+ Y++ + + HRDL ++N +V++D T+KI DFG+ +E D + +
Sbjct: 133 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 192
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 193 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 227
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ L++ +G G++G+V++ ++G+ AIK + + EE +E+ L+K ++H NI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGDEEEEIKQEINMLKKYSHHRNI 83
Query: 64 VKL------QELASENYRLYFVFEYMDC-NLHQLMSNRK-QCFSEAEVKNWCFQILQGLN 115
+ + +L+ V E+ ++ L+ N K E + C +IL+GL+
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 116 YMHRQGYFHRDLISKN-LLVSNDTIKIADFGLAWEVD-SCPPYTEYITTLQYRAPEMLL- 172
++H+ HRD+ +N LL N +K+ DFG++ ++D + +I T + APE++
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 173 ---MSGQYNSKVDMWALGLIMAELITFHP 198
Y+ K D+W+LG+ E+ P
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 66
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCE 205
S D+WALG I+ +L+ P F E
Sbjct: 186 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 67
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 187 SACKSS-DLWALGCIIYQLVAGLPPF 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 77 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYI 160
+I G+ Y++ + + HRDL ++N +V++D T+KI DFG+ +E D + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 194 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 10 IGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG+V K G+ +VAIK LK + L E + + + HPN++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNVIHL 99
Query: 67 QELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHR 125
+ + +++ + + E+M+ +L + F+ ++ I G+ Y+ Y HR
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR 159
Query: 126 DLISKNLLVSNDTI-KIADFGLAW---EVDSCPPYTEYI---TTLQYRAPEMLLMSGQYN 178
DL ++N+LV+++ + K++DFGL+ + S P YT + +++ APE + ++
Sbjct: 160 DLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-KFT 218
Query: 179 SKVDMWALGLIMAELITF 196
S D+W+ G++M E++++
Sbjct: 219 SASDVWSYGIVMWEVMSY 236
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 70 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y ++ +++ APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 186 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 228
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 74 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYI 160
+I G+ Y++ + + HRDL ++N +V++D T+KI DFG+ E D + +
Sbjct: 131 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 190
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 191 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 48/303 (15%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNHPNI 63
+ ++IG GSFG V +A + G VA+K L ++ + E L+EV ++++ HPNI
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR-HPNI 96
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLM--SNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
V ++ L V EY+ +L++L+ S ++ E + + + +G+NY+H +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 121 G--YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYIT-TLQYRAPEMLLMSGQ 176
HRDL S NLLV T+K+ DFGL+ S ++ T ++ APE +L
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPE-VLRDEP 215
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWA--EGLELAKAH 234
N K D+++ G+I+ EL T ++ W ++ A
Sbjct: 216 SNEKSDVYSFGVILWELATL------------------------QQPWGNLNPAQVVAAV 251
Query: 235 GYKFPKLQGNNLSLLIP-SANDDEMSLIELLCSWDPCKRPTAAEALQ--HPLFQGCLQVP 291
G+K +L+ IP + N ++IE + +P KRP+ A + PL + + P
Sbjct: 252 GFKCKRLE-------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
Query: 292 SMS 294
+ S
Sbjct: 305 NRS 307
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 51/315 (16%)
Query: 2 EKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+ Y L KQ+ G G GKV + +++G+ A+K L ++ +EV + +
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL------YDSPKARQEVDHHWQASGG 81
Query: 61 PNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGL 114
P+IV + ++ + L + E M+ ++ Q F+E E I +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 115 NYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDS----CPPYTEYITTLQYR 166
++H HRD+ +NLL + + +K+ DFG A E P YT Y Y
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YV 196
Query: 167 APEMLLMSGQYNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWA 225
APE +L +Y+ DMW+LG+IM L+ F P + T G
Sbjct: 197 APE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT-------------GQAISPGMK 242
Query: 226 EGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
+ L + Y FP + + +S +D LI LL DP +R T + + HP
Sbjct: 243 RRIRLGQ---YGFPNPEWSEVS-------EDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292
Query: 286 GCLQVPSMSIDSCKM 300
+ VP + + ++
Sbjct: 293 QSMVVPQTPLHTARV 307
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 75 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y ++ +++ APE +
Sbjct: 131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 191 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 87
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCE 205
S D+WALG I+ +L+ P F E
Sbjct: 207 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 51/315 (16%)
Query: 2 EKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
+ Y L KQ+ G G GKV + +++G+ A+K L ++ +EV + +
Sbjct: 9 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL------YDSPKARQEVDHHWQASGG 62
Query: 61 PNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGL 114
P+IV + ++ + L + E M+ ++ Q F+E E I +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 115 NYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDS----CPPYTEYITTLQYR 166
++H HRD+ +NLL + + +K+ DFG A E P YT Y Y
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YV 177
Query: 167 APEMLLMSGQYNSKVDMWALGLIMAELI-TFHPLFPGTCEDDQLYKICNAIGSPTEESWA 225
APE +L +Y+ DMW+LG+IM L+ F P + T G
Sbjct: 178 APE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT-------------GQAISPGMK 223
Query: 226 EGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
+ L + Y FP + + +S +D LI LL DP +R T + + HP
Sbjct: 224 RRIRLGQ---YGFPNPEWSEVS-------EDAKQLIRLLLKTDPTERLTITQFMNHPWIN 273
Query: 286 GCLQVPSMSIDSCKM 300
+ VP + + ++
Sbjct: 274 QSMVVPQTPLHTARV 288
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGLA ++ P Y T +++ +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 39/224 (17%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE---------------- 44
+ +YTL +IG+GS+G V A + Y A+K L ++ +
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 45 -CLNLK--------EVKCLRKINNHPNIVKLQELASE--NYRLYFVFEYMDCNLHQLMSN 93
C+ + E+ L+K++ HPN+VKL E+ + LY VFE ++ +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 94 RKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS 152
K SE + + + +++G+ Y+H Q HRD+ NLLV D IKIADFG++ E
Sbjct: 131 LKP-LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 153 CPP-YTEYITTLQYRAPEML-----LMSGQYNSKVDMWALGLIM 190
+ + T + APE L + SG+ +D+WA+G+ +
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGK---ALDVWAMGVTL 230
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 77 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYI 160
+I G+ Y++ + + HRDL ++N +V++D T+KI DFG+ E D + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGL 193
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 194 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 98 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y ++ +++ APE +
Sbjct: 154 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 214 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 256
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF V A + + AIK L++R E + +E + +++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 87
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCE 205
S D+WALG I+ +L+ P F E
Sbjct: 207 SACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 70 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y ++ +++ APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 186 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 228
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 35/223 (15%)
Query: 7 MKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ IGEG+FG+V+QA + + VA+K LK+ + + +E + + +N P
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN-P 110
Query: 62 NIVKLQELASENYRLYFVFEYMD----------------CNL-HQLMSNRKQCFSEAEVK 104
NIVKL + + + +FEYM C+L H +S R + S
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 105 NWCF-------QILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPY 156
C Q+ G+ Y+ + + HRDL ++N LV N +KIADFGL+ + S Y
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 157 T---EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ PE + + +Y ++ D+WA G+++ E+ ++
Sbjct: 231 KADGNDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIFSY 272
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 73 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTL--QYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y L ++ APE +
Sbjct: 129 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 189 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 231
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 72 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y ++ +++ APE +
Sbjct: 128 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 187
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 188 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 230
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 67 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y ++ +++ APE +
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 183 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQ-- 67
IG G FG+V++A + G+ IK +K Y+ E+ +EVK L K++ H NIV
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAE--REVKALAKLD-HVNIVHYNGC 72
Query: 68 --------ELASENYR------LYFVFEYMD-CNLHQLMSNRK-QCFSEAEVKNWCFQIL 111
E +S+N L+ E+ D L Q + R+ + + QI
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 112 QGLNYMHRQGYFHRDLISKNL-LVSNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
+G++Y+H + +RDL N+ LV +KI DFGL + + TL+Y +PE
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQ 192
Query: 171 LLMSGQYNSKVDMWALGLIMAELI 194
+ S Y +VD++ALGLI+AEL+
Sbjct: 193 I-SSQDYGKEVDLYALGLILAELL 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
E + K +GEGSF A + + AIK L++R E + +E + +++
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRK-QCFSEAEVKNWCFQILQGLNYMH 118
HP VKL ++ +LYF Y N L RK F E + + +I+ L Y+H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 119 RQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTE---YITTLQYRAPEMLLMS 174
+G HRDL +N+L++ D I+I DFG A + ++ T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 175 GQYNSKVDMWALGLIMAELITFHPLF 200
S D+WALG I+ +L+ P F
Sbjct: 208 SACKSS-DLWALGCIIYQLVAGLPPF 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 48/303 (15%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKINNHPNI 63
+ ++IG GSFG V +A + G VA+K L ++ + E L+EV ++++ HPNI
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR-HPNI 96
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLM--SNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
V ++ L V EY+ +L++L+ S ++ E + + + +G+NY+H +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 121 G--YFHRDLISKNLLVSND-TIKIADFGLA-WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HR+L S NLLV T+K+ DFGL+ + + T ++ APE +L
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE-VLRDEP 215
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWA--EGLELAKAH 234
N K D+++ G+I+ EL T ++ W ++ A
Sbjct: 216 SNEKSDVYSFGVILWELATL------------------------QQPWGNLNPAQVVAAV 251
Query: 235 GYKFPKLQGNNLSLLIP-SANDDEMSLIELLCSWDPCKRPTAAEALQ--HPLFQGCLQVP 291
G+K +L+ IP + N ++IE + +P KRP+ A + PL + + P
Sbjct: 252 GFKCKRLE-------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
Query: 292 SMS 294
+ S
Sbjct: 305 NRS 307
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 77 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT---EYI 160
+I G+ Y++ + + HRDL ++N +V++D T+KI DFG+ ++ Y + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGL 193
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 194 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 80/334 (23%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL---KQRIYSWEECLNLK-EVKCLRKI 57
+KY L IG+GS+G V AI+ Q+ AIK + K R + ++ +K EV+ ++K+
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 58 NNHPNIVKLQELASENYRLYFVFE-------------YMD-------------------- 84
+ HPNI +L E+ + + V E ++D
Sbjct: 86 H-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144
Query: 85 CN-------LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSND 137
CN +H + E + N QI L+Y+H QG HRD+ +N L S +
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
Query: 138 T---IKIADFGLA---WEVDSCPPY--TEYITTLQYRAPEMLLMSGQ-YNSKVDMWALGL 188
IK+ DFGL+ +++++ Y T T + APE+L + + Y K D W+ G+
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 189 IMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSL 248
++ L+ FPG + D + ++ N K ++ P N ++
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQVLN-----------------KKLCFENP-----NYNV 302
Query: 249 LIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
L P A D L+ L + + +R A ALQHP
Sbjct: 303 LSPLARD----LLSNLLNRNVDERFDAMRALQHP 332
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQEL 69
+G+G FG+ + +++GE + +K L R + LKEVK +R + HPN++K +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL-IRFDEETQRTFLKEVKVMRCLE-HPNVLKFIGV 75
Query: 70 ASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLI 128
++ RL F+ EY+ L ++ + + ++ ++ I G+ Y+H HRDL
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135
Query: 129 SKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQ---------------YRAPEMLL 172
S N LV N + +ADFGLA + E + +L+ + APEM +
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM-I 194
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
Y+ KVD+++ G+++ E+I
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEII 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 17/199 (8%)
Query: 5 TLMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
T +++IG G FG V W K VAIK +++ S E+ + +E + + K++ H
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFI--EEAEVMMKLS-H 62
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
P +V+L + E + V E+M+ L + ++ F+ + C + +G+ Y+
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 120 QGYFHRDLISKNLLVS-NDTIKIADFGLAWEV--DSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL ++N LV N IK++DFG+ V D T +++ +PE+ S +
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-R 181
Query: 177 YNSKVDMWALGLIMAELIT 195
Y+SK D+W+ G++M E+ +
Sbjct: 182 YSSKSDVWSFGVLMWEVFS 200
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 137/319 (42%), Gaps = 71/319 (22%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALK--QRIYSWEECLNLKEVKCLRKINNHPNIVK-- 65
+G G FG V++A K AIK ++ R + E+ + +EVK L K+ HP IV+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM--REVKALAKLE-HPGIVRYF 69
Query: 66 --------LQELASENYRLYFVFEYMDC---NLHQLMSNRKQCFSEAEVKNWCF----QI 110
++L + ++Y + C NL M+ R C E ++ C QI
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQI 127
Query: 111 LQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDS----------CPPYTEY 159
+ + ++H +G HRDL N+ + +D +K+ DFGL +D P Y +
Sbjct: 128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 160 ---ITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAI 216
+ T Y +PE + Y+ KVD+++LGLI+ EL L+P + + +++
Sbjct: 188 TGQVGTKLYMSPEQ-IHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRT----- 236
Query: 217 GSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAA 276
L KFP L E +++ + S P +RP A
Sbjct: 237 -------------LTDVRNLKFPPLFTQKYPC--------EYVMVQDMLSPSPMERPEAI 275
Query: 277 EALQHPLFQGCLQVPSMSI 295
+++ +F+ L P ++
Sbjct: 276 NIIENAVFED-LDFPGKTV 293
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 149/370 (40%), Gaps = 78/370 (21%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINNHP 61
+Y L++++G G F VW A + +VA+K ++ ++Y+ E E+K L+++N+
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT--EAAE-DEIKLLQRVNDAD 76
Query: 62 N----------IVKL----QELASENYRLYFVFEYMDCNLHQLMSN-RKQCFSEAEVKNW 106
N I+KL + VFE + NL L+ + VK
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 107 CFQILQGLNYMHRQ-GYFHRDLISKNLLVS-NDT------IKIADFGLAWEVDSCPPYTE 158
Q+L GL+YMHR+ G H D+ +N+L+ D+ IKIAD G A D YT
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTN 194
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPG------TCEDDQLYKI 212
I T +YR+PE+LL + D+W+ ++ ELIT LF T +DD + +I
Sbjct: 195 SIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 213 CNAIGSPTEESWAEG-----------------------LELAKAHGYKFPKLQGNNLSLL 249
+G G LE YKF K + +S
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS-- 311
Query: 250 IPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCKMRLTPSAKKS 309
+ + DP KR A + HP + L + + + P +
Sbjct: 312 ---------DFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV--------PDRELY 354
Query: 310 GWKAKLIVWF 319
G + + WF
Sbjct: 355 GSGSDIPGWF 364
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 149/370 (40%), Gaps = 78/370 (21%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINNHP 61
+Y L++++G G F VW A + +VA+K ++ ++Y+ E E+K L+++N+
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT--EAAE-DEIKLLQRVNDAD 76
Query: 62 N----------IVKL----QELASENYRLYFVFEYMDCNLHQLMSN-RKQCFSEAEVKNW 106
N I+KL + VFE + NL L+ + VK
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQI 136
Query: 107 CFQILQGLNYMHRQ-GYFHRDLISKNLLVS-NDT------IKIADFGLAWEVDSCPPYTE 158
Q+L GL+YMHR+ G H D+ +N+L+ D+ IKIAD G A D YT
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTN 194
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPG------TCEDDQLYKI 212
I T +YR+PE+LL + D+W+ ++ ELIT LF T +DD + +I
Sbjct: 195 SIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 213 CNAIGSPTEESWAEG-----------------------LELAKAHGYKFPKLQGNNLSLL 249
+G G LE YKF K + +S
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS-- 311
Query: 250 IPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPSMSIDSCKMRLTPSAKKS 309
+ + DP KR A + HP + L + + + P +
Sbjct: 312 ---------DFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV--------PDRELY 354
Query: 310 GWKAKLIVWF 319
G + + WF
Sbjct: 355 GSGSDIPGWF 364
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ +GEG FGKV + +GE VA+KALK+ +E++ LR + H +
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY-HEH 71
Query: 63 IVKLQELASENYR--LYFVFEYMDCNLHQLMSNR----KQCFSEAEVKNWCFQILQGLNY 116
IVK + + + V EY+ L S R + C A++ + QI +G+ Y
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVP-----LGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 126
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+H Q Y HR L ++N+L+ ND +KI DFGLA V P EY + + AP
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWYAP 183
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L Y + D+W+ G+ + EL+T+
Sbjct: 184 ECLKECKFYYAS-DVWSFGVTLYELLTY 210
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ +GEG FGKV + +GE VA+KALK+ +E++ LR + H +
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY-HEH 72
Query: 63 IVKLQELASENYR--LYFVFEYMDCNLHQLMSNR----KQCFSEAEVKNWCFQILQGLNY 116
IVK + + + V EY+ L S R + C A++ + QI +G+ Y
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVP-----LGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 127
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+H Q Y HR L ++N+L+ ND +KI DFGLA V P EY + + AP
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWYAP 184
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L Y + D+W+ G+ + EL+T+
Sbjct: 185 ECLKECKFYYAS-DVWSFGVTLYELLTY 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 70 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLA--WEVDSCPPYTEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ E + ++ +++ APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESIN 185
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 186 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 228
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 94
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 213
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 214 -KFTSASDVWSYGIVLWEVMSY 234
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK----QRIYSWEECLNLKEVKCLRK 56
+ + + K+IG G F +V++A G VA+K ++ + +C+ KE+ L++
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQ 88
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSN---RKQCFSEAEVKNWCFQILQ 112
+N HPN++K E+ L V E D +L +++ + +K+ E V + Q+
Sbjct: 89 LN-HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 113 GLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDS-CPPYTEYITTLQYRAPEM 170
L +MH + HRD+ N+ ++ +K+ D GL S + T Y +PE
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 171 LLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAI 216
+ +G YN K D+W+LG ++ E+ F G + LY +C I
Sbjct: 208 IHENG-YNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKI 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL ++ P Y T +++ +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 140/297 (47%), Gaps = 48/297 (16%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWE---ECLNLKEVKCLRKINN 59
KY + +GEGS+GKV + + ++ A+K LK++ E KE++ LR++
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMDCNLHQLM-SNRKQCFSEAEVKNWCFQILQGLNY 116
H N+++L ++ E ++Y V EY C + +++ S ++ F + + Q++ GL Y
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 117 MHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEV------DSCPPYTEYITTLQYRAPE 169
+H QG H+D+ NLL+ + T+KI+ G+A + D+C + ++ PE
Sbjct: 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC---RTSQGSPAFQPPE 181
Query: 170 MLLMSGQYNS-KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
+ ++ KVD+W+ G+ + + T L+P E D +YK+ IG +
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTG--LYP--FEGDNIYKLFENIGKGS-------- 229
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQ 285
Y P G LS L++ + ++P KR + + QH F+
Sbjct: 230 -------YAIPGDCGPPLS-----------DLLKGMLEYEPAKRFSIRQIRQHSWFR 268
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 35/225 (15%)
Query: 5 TLMKQIGEGSFGKVWQA----IKKQSG-EYVAIKALKQRIYSWEECLNLKEVKCLRKINN 59
L K +GEG FGKV +A +K ++G VA+K LK+ E L E L+++N
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN- 84
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQ--LMSNRK---------------------- 95
HP+++KL S++ L + EY + L +RK
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 96 QCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLA---WEVD 151
+ + ++ ++ +QI QG+ Y+ HRDL ++N+LV+ +KI+DFGL+ +E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 152 SCPPYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
S ++ +++ A E L Y ++ D+W+ G+++ E++T
Sbjct: 205 SXVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 104
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 223
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 224 -KFTSASDVWSYGIVLWEVMSY 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 77
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 197 -KFTSASDVWSYGIVLWEVMSY 217
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 25/208 (12%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
++Q+G+G+FG V + ++ +GE VA+K L+ +S EE L +E++ L+ +
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ- 72
Query: 60 HPNIVKLQEL--ASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H NIVK + + ++ L + EY+ +L + + ++ + QI +G+ Y
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 117 MHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAP 168
+ + Y HRDL ++N+LV N+ +KI DFGL P E + + AP
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITF 196
E L S +++ D+W+ G+++ EL T+
Sbjct: 190 ESLTES-KFSVASDVWSFGVVLYELFTY 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL--- 66
IG G FG+V++A + G+ I+ +K Y+ E+ +EVK L K++ H NIV
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVK---YNNEKAE--REVKALAKLD-HVNIVHYNGC 73
Query: 67 ------------QELASENYR--------------LYFVFEYMD-CNLHQLMSNRK-QCF 98
L S +Y L+ E+ D L Q + R+ +
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 99 SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNL-LVSNDTIKIADFGLAWEVDSCPPYT 157
+ QI +G++Y+H + HRDL N+ LV +KI DFGL + + T
Sbjct: 134 DKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT 193
Query: 158 EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELI 194
TL+Y +PE + S Y +VD++ALGLI+AEL+
Sbjct: 194 RSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 450 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTL--QYRAPEMLL 172
Y+ + + HRD+ ++N+LV SND +K+ DFGL+ ++ Y L ++ APE +
Sbjct: 506 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 566 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 608
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
++ Y L + IG G F KV A +GE VAIK + + + E++ L+ + H
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR-H 67
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSN--RKQCFSEAEVKNWCFQILQGLNYMH 118
+I +L + +++ V EY C +L + SE E + QI+ + Y+H
Sbjct: 68 QHICQLYHVLETANKIFMVLEY--CPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 119 RQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLLMSG 175
QGY HRDL +NLL +K+ DFGL + Y +L Y APE++
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 176 QYNSKVDMWALGLIMAELI 194
S+ D+W++G+++ L+
Sbjct: 186 YLGSEADVWSMGILLYVLM 204
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 56/329 (17%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIK-KQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-- 58
E+Y ++ +GEG+FG+V Q + ++ G VA+K +K + ++E L E+ L KIN
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKN-VEKYKEAARL-EINVLEKINEK 90
Query: 59 --NHPNI-VKLQELASENYRLYFVFEYMDCNLHQ-LMSNRKQCFSEAEVKNWCFQILQGL 114
++ N+ V++ + + + FE + + L N + +V++ FQ+ Q +
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAV 150
Query: 115 NYMHRQGYFHRDLISKNLL--------------------VSNDTIKIADFGLAWEVDSCP 154
++H H DL +N+L V + +++ DFG A
Sbjct: 151 KFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDHE 208
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
++ ++T YRAPE++L G ++ D+W++G I+ E LF + L +
Sbjct: 209 HHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 267
Query: 215 AIGSPTEE----------------SWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDE- 257
+G W E ++ + L + S ++
Sbjct: 268 ILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAG-----RYVRENCKPLRRYLTSEAEEHH 322
Query: 258 --MSLIELLCSWDPCKRPTAAEALQHPLF 284
LIE + ++P KR T EALQHP F
Sbjct: 323 QLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 10 IGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG+V + K G+ VAIK LK + L E + + HPNI++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 82
Query: 67 QELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHR 125
+ + + + + + E+M+ L + F+ ++ I G+ Y+ Y HR
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 126 DLISKNLLVSNDTI-KIADFGLAW---EVDSCPPYTEYI---TTLQYRAPEMLLMSGQYN 178
DL ++N+LV+++ + K++DFGL+ E S P T + +++ APE + ++
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR-KFT 201
Query: 179 SKVDMWALGLIMAELITF 196
S D W+ G++M E+++F
Sbjct: 202 SASDAWSYGIVMWEVMSF 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIK-ALKQRIYSWEECLNLKEVKCLRKINNH 60
+ + + ++G GS+G+V++ K+ G A+K ++ + L EV K+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 61 PNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
P V+L++ E LY E +L Q EA+V + L L ++H Q
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 121 GYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNS 179
G H D+ N+ + K+ DFGL E+ + +Y APE L+ G Y +
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPE--LLQGSYGT 234
Query: 180 KVDMWALGLIMAEL 193
D+++LGL + E+
Sbjct: 235 AADVFSLGLTILEV 248
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 78 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYI 160
+I G+ Y++ + + HR+L ++N +V++D T+KI DFG+ +E D + +
Sbjct: 135 QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 194
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 195 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK TL++++G+GSFG V++ IK ++ VA+K + + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEA------------EVK 104
H ++V+L + S+ V E M L S + EA E+
Sbjct: 77 FTCH-HVVRLLGVVSKGQPTLVVMELMAHG--DLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYI 160
+I G+ Y++ + + HR+L ++N +V++D T+KI DFG+ +E D + +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 193
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ APE L G + + DMW+ G+++ E+ +
Sbjct: 194 LPVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITSL 228
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 35/225 (15%)
Query: 5 TLMKQIGEGSFGKVWQA----IKKQSG-EYVAIKALKQRIYSWEECLNLKEVKCLRKINN 59
L K +GEG FGKV +A +K ++G VA+K LK+ E L E L+++N
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN- 84
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQ--LMSNRK---------------------- 95
HP+++KL S++ L + EY + L +RK
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 96 QCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLA---WEVD 151
+ + ++ ++ +QI QG+ Y+ HRDL ++N+LV+ +KI+DFGL+ +E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 152 SCPPYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
S ++ +++ A E L Y ++ D+W+ G+++ E++T
Sbjct: 205 SXVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 44/289 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-- 58
++ + +++ +G+G FG V+ A +KQ+ +A+K L + E E + R+I
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV----EHQLRREIEIQ 68
Query: 59 ---NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
HPNI+++ + R+Y + E+ + F E + ++ L+
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLM 173
Y H + HRD+ +NLL+ +KIADFG W V + + TL Y PEM +
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFG--WSVHAPSLRRRXMCGTLDYLPPEM-IE 185
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
++ KVD+W G++ E + P F + +I N
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------------------ 227
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
KFP P +D LI L + P +R ++HP
Sbjct: 228 -DLKFP-----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 35/225 (15%)
Query: 5 TLMKQIGEGSFGKVWQA----IKKQSG-EYVAIKALKQRIYSWEECLNLKEVKCLRKINN 59
L K +GEG FGKV +A +K ++G VA+K LK+ E L E L+++N
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN- 84
Query: 60 HPNIVKLQELASENYRLYFVFEYMDCNLHQ--LMSNRK---------------------- 95
HP+++KL S++ L + EY + L +RK
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 96 QCFSEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLA---WEVD 151
+ + ++ ++ +QI QG+ Y+ HRDL ++N+LV+ +KI+DFGL+ +E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 152 SCPPYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
S ++ +++ A E L Y ++ D+W+ G+++ E++T
Sbjct: 205 SYVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 129/301 (42%), Gaps = 53/301 (17%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINNH 60
E Y ++ IG GS+G+ + +K G+ + K L + E+ + + EV LR++ H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-H 64
Query: 61 PNIVKLQE--LASENYRLYFVFEYMDCNLHQLMS------NRKQCFSEAEVKNWCFQILQ 112
PNIV+ + + N LY V EY C L S +Q E V Q+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEY--CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 113 GLNYMHRQG-----YFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYT-EYITTLQY 165
L HR+ HRDL N+ + +K+ DFGLA ++ + E++ T Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 166 RAPE-MLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESW 224
+PE M MS YN K D+W+LG ++ EL P F + + KI
Sbjct: 183 MSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI------------ 228
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMS-LIELLCSWDPCKRPTAAEALQHPL 283
EG KF + IP DE++ +I + + RP+ E L++PL
Sbjct: 229 REG---------KFRR---------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270
Query: 284 F 284
Sbjct: 271 I 271
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V EYM+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
G+ HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 112/212 (52%), Gaps = 22/212 (10%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 63
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 64 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 120 QGYFHRDLISKNLLVSNDTI--KIADFGLAWEVDSCPPYTEYITT------LQYRAPEML 171
+ Y HRDL + N+LVS DT+ KIADFGLA ++ EY +++ APE
Sbjct: 123 RNYIHRDLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKWTAPEA- 176
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPL-FPG 202
+ G + K D+W+ G+++ E++T + +PG
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M+N S +++
Sbjct: 85 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 204 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 236
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
K IG G FG+V K G+ VAIK LK + L E + + + HPNI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 72
Query: 65 KLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L+ + ++ + + EYM+ +L + F+ ++ I G+ Y+ Y
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 124 HRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N+LV+++ + K++DFG++ ++ P Y T +++ APE + ++
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIAYR-KF 190
Query: 178 NSKVDMWALGLIMAELITF 196
S D+W+ G++M E++++
Sbjct: 191 TSASDVWSYGIVMWEVMSY 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 70 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPEMLL 172
Y+ + + HRD+ ++N+LVS D +K+ DFGL+ ++ Y ++ +++ APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 186 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 68
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS+ + KIADFGLA ++ EY +++ APE +
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIED----NEYTAREGAKFPIKWTAPEA-I 182
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPG 202
G + K D+W+ G+++ E++T + +PG
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 74
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 75 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS+ + KIADFGLA ++ EY +++ APE +
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIED----NEYTAREGAKFPIKWTAPEA-I 188
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPG 202
G + K D+W+ G+++ E++T + +PG
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 78
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 79 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS+ + KIADFGLA ++ EY +++ APE +
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLARLIED----NEYTAREGAKFPIKWTAPEA-I 192
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPG 202
G + K D+W+ G+++ E++T + +PG
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINN-- 59
E+Y ++ ++G G V+ A VAIKA+ EE L E R+++N
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE----REVHNSS 66
Query: 60 ---HPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
H NIV + ++ E+ Y V EY++ L + + + + + N+ QIL G+
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI-NFTNQILDGIK 125
Query: 116 YMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVD--SCPPYTEYITTLQYRAPEMLL 172
+ H HRD+ +N+L+ SN T+KI DFG+A + S + T+QY +PE
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ-- 183
Query: 173 MSGQYNSK-VDMWALGLIMAELITFHPLFPG 202
G+ + D++++G+++ E++ P F G
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
K IG G FG+V K G+ VAIK LK + L E + + + HPNI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 78
Query: 65 KLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L+ + ++ + + EYM+ +L + F+ ++ I G+ Y+ Y
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 124 HRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N+LV+++ + K++DFG++ ++ P Y T +++ APE + ++
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIAYR-KF 196
Query: 178 NSKVDMWALGLIMAELITF 196
S D+W+ G++M E++++
Sbjct: 197 TSASDVWSYGIVMWEVMSY 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 73
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 74 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT------LQYRAPEMLL 172
+ Y HRDL + N+LVS+ + KIADFGLA ++ EY +++ APE +
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLARLIED----NEYTAREGAKFPIKWTAPEA-I 187
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL-FPG 202
G + K D+W+ G+++ E++T + +PG
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L+K IG G+FG KQS E VA+K + +R +E N+K + HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDE--NVKREIINHRSLRHP 75
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV+ +E+ L V EY L + + N + FSE E + + Q++ G++Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAM 134
Query: 121 GYFHRDLISKNLLVSND---TIKIADFGLAWE--VDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N L+ +KI FG + + S P T + T Y APE+LL
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKK- 191
Query: 176 QYNSKV-DMWALGLIM 190
+Y+ KV D+W+ G+ +
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M+N S +++
Sbjct: 75 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 133
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 134 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 194 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 226
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 135/304 (44%), Gaps = 54/304 (17%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCF-----------SEAEV 103
I +H N+V L ++ L + E+ NL + +++ F + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 104 KNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT---EY 159
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P Y +
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 160 ITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGS 218
L++ APE + Y + D+W+ G+++ E+ + +PG D++ +
Sbjct: 207 RLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR------- 258
Query: 219 PTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRPTAAE 277
EG + +A Y P EM L C +P +RPT +E
Sbjct: 259 ----RLKEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSE 296
Query: 278 ALQH 281
++H
Sbjct: 297 LVEH 300
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 20/220 (9%)
Query: 10 IGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG+V K G+ +VAIK LK + L E + + + HPN++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNVIHL 73
Query: 67 QELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHR 125
+ + +++ + + E+M+ +L + F+ ++ I G+ Y+ Y HR
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR 133
Query: 126 DLISKNLLVSNDTI-KIADFGLAW---EVDSCPPYTEYI---TTLQYRAPEMLLMSGQYN 178
L ++N+LV+++ + K++DFGL+ + S P YT + +++ APE + ++
Sbjct: 134 ALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-KFT 192
Query: 179 SKVDMWALGLIMAELITF--HPLFPGTCEDDQLYKICNAI 216
S D+W+ G++M E++++ P + T +D + NAI
Sbjct: 193 SASDVWSYGIVMWEVMSYGERPYWDMTNQD-----VINAI 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y +K IG G+FG K + E VA+K + +R + +E + +E+ R + HP
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI-ERGAAIDENVQ-REIINHRSLR-HP 76
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV+ +E+ L + EY L++ + N + FSE E + + Q+L G++Y H
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCHSM 135
Query: 121 GYFHRDLISKNLLVSND---TIKIADFGLAWE--VDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N L+ +KI DFG + + S P T + T Y APE+LL
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQ- 192
Query: 176 QYNSKV-DMWALGLIM 190
+Y+ K+ D+W+ G+ +
Sbjct: 193 EYDGKIADVWSCGVTL 208
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++Y L+K IG G+FG KQS E VA+K + +R +E N+K + HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDE--NVKREIINHRSLRHP 75
Query: 62 NIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NIV+ +E+ L V EY L + + N + FSE E + + Q++ G++Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAM 134
Query: 121 GYFHRDLISKNLLVSND---TIKIADFGLAWE--VDSCPPYTEYITTLQYRAPEMLLMSG 175
HRDL +N L+ +KI FG + + S P T + T Y APE+LL
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEVLLKK- 191
Query: 176 QYNSKV-DMWALGLIM 190
+Y+ KV D+W+ G+ +
Sbjct: 192 EYDGKVADVWSCGVTL 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 44/289 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-- 58
++ + + + +G+G FG V+ A +KQ+ +A+K L + E E + R+I
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV----EHQLRREIEIQ 68
Query: 59 ---NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
HPNI+++ + R+Y + E+ + F E + ++ L+
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLM 173
Y H + HRD+ +NLL+ +KIADFG W V + + TL Y PEM +
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFG--WSVHAPSLRRRXMCGTLDYLPPEM-IE 185
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
++ KVD+W G++ E + P F + +I N
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------------------ 227
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
KFP P +D LI L + P +R ++HP
Sbjct: 228 -DLKFP-----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 44/289 (15%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-- 58
++ + + + +G+G FG V+ A +KQ+ +A+K L + E E + R+I
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV----EHQLRREIEIQ 69
Query: 59 ---NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLN 115
HPNI+++ + R+Y + E+ + F E + ++ L+
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH 129
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYI-TTLQYRAPEMLLM 173
Y H + HRD+ +NLL+ +KIADFG W V + + TL Y PEM +
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFG--WSVHAPSLRRRXMCGTLDYLPPEM-IE 186
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
++ KVD+W G++ E + P F + +I N
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------------------ 228
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
KFP P +D LI L + P +R ++HP
Sbjct: 229 -DLKFP-----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 265
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
M++ L++ IG+G FG V + G VA+K +K + L E + ++ H
Sbjct: 11 MKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLR-H 64
Query: 61 PNIVKL-QELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N+V+L + E LY V EYM + L S + + + + + + Y+
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 118 HRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ HRDL ++N+LVS D + K++DFGL E S + +++ APE L
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEA-LREAA 181
Query: 177 YNSKVDMWALGLIMAELITF----HPLFP 201
+++K D+W+ G+++ E+ +F +P P
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVPYPRIP 210
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI---KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN 58
E+ L + IGEG FG V Q I + VAIK K L+E +R+ +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCNLHQLMS---NRKQCFSEAEVKNWCFQILQGLN 115
HP+IVKL + +EN ++ + E C L +L S RK A + + +Q+ L
Sbjct: 450 -HPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 116 YMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTL--QYRAPEMLL 172
Y+ + + HRD+ ++N+LVS D +K+ DFGL+ ++ Y L ++ APE +
Sbjct: 506 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPL--FPGTCEDDQLYKICNA 215
++ S D+W G+ M E++ H + F G +D + +I N
Sbjct: 566 FR-RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIENG 608
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 53/301 (17%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINNH 60
E Y ++ IG GS+G+ + +K G+ + K L + E+ + + EV LR++ H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-H 64
Query: 61 PNIVKLQE--LASENYRLYFVFEYMDCNLHQLMS------NRKQCFSEAEVKNWCFQILQ 112
PNIV+ + + N LY V EY C L S +Q E V Q+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEY--CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 113 GLNYMHRQG-----YFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTE-YITTLQY 165
L HR+ HRDL N+ + +K+ DFGLA ++ + + ++ T Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 166 RAPE-MLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESW 224
+PE M MS YN K D+W+LG ++ EL P F + + KI
Sbjct: 183 MSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI------------ 228
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMS-LIELLCSWDPCKRPTAAEALQHPL 283
EG KF + IP DE++ +I + + RP+ E L++PL
Sbjct: 229 REG---------KFRR---------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270
Query: 284 F 284
Sbjct: 271 I 271
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
M++ L++ IG+G FG V + G VA+K +K + L E + ++ H
Sbjct: 20 MKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLR-H 73
Query: 61 PNIVKL-QELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N+V+L + E LY V EYM + L S + + + + + + Y+
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 118 HRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ HRDL ++N+LVS D + K++DFGL E S + +++ APE L +
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEA-LREKK 190
Query: 177 YNSKVDMWALGLIMAELITF----HPLFP 201
+++K D+W+ G+++ E+ +F +P P
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 53/301 (17%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALK-QRIYSWEECLNLKEVKCLRKINNH 60
E Y ++ IG GS+G+ + +K G+ + K L + E+ + + EV LR++ H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-H 64
Query: 61 PNIVKLQE--LASENYRLYFVFEYMDCNLHQLMS------NRKQCFSEAEVKNWCFQILQ 112
PNIV+ + + N LY V EY C L S +Q E V Q+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEY--CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 113 GLNYMHRQG-----YFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTE-YITTLQY 165
L HR+ HRDL N+ + +K+ DFGLA ++ + + ++ T Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 166 RAPE-MLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESW 224
+PE M MS YN K D+W+LG ++ EL P F + + KI
Sbjct: 183 MSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI------------ 228
Query: 225 AEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMS-LIELLCSWDPCKRPTAAEALQHPL 283
EG KF + IP DE++ +I + + RP+ E L++PL
Sbjct: 229 REG---------KFRR---------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270
Query: 284 F 284
Sbjct: 271 I 271
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 146/336 (43%), Gaps = 66/336 (19%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
+ +++++G+G+FG+V + +Y A+K ++ I + + E L+KI N
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKI-EADILKKIQNDDIN 94
Query: 64 VKLQELASENYRLY----FVFEYMDCNLHQLMS-NRKQCFSEAEVKNWCFQILQGLNYMH 118
+ Y +FE + +L+++++ N F ++K +C +IL+ LNY+
Sbjct: 95 NNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR 154
Query: 119 RQGYFHRDLISKNLLVSN--------------------------DTIKIADFGLA-WEVD 151
+ H DL +N+L+ + IK+ DFG A ++ D
Sbjct: 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214
Query: 152 SCPPYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYK 211
+ I T QYRAPE++L G ++ DMW+ G ++AEL T LF T E +
Sbjct: 215 Y---HGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFR-THEHMEHLA 269
Query: 212 ICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLI---------- 261
+ +I P ++ E K +G K+ + + L L P N ++ I
Sbjct: 270 MMESIIQPIPKNML--YEATKTNGSKY--VNKDELKLAWPE-NASSINSIKHVKKCLPLY 324
Query: 262 -----ELLCSW-------DPCKRPTAAEALQHPLFQ 285
EL C + DP RP+ AE L+H +
Sbjct: 325 KIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
M++ L++ IG+G FG V + G VA+K +K + L E + ++ H
Sbjct: 5 MKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLR-H 58
Query: 61 PNIVKL-QELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N+V+L + E LY V EYM + L S + + + + + + Y+
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 118 HRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ HRDL ++N+LVS D + K++DFGL E S + +++ APE L +
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEA-LREKK 175
Query: 177 YNSKVDMWALGLIMAELITF----HPLFP 201
+++K D+W+ G+++ E+ +F +P P
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIP 204
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 112/212 (52%), Gaps = 22/212 (10%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 65 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 120 QGYFHRDLISKNLLVSNDTI--KIADFGLAWEVDSCPPYTEYITT------LQYRAPEML 171
+ Y HR+L + N+LVS DT+ KIADFGLA ++ EY +++ APE
Sbjct: 124 RNYIHRNLRAANILVS-DTLSCKIADFGLARLIED----NEYTAREGAKFPIKWTAPEA- 177
Query: 172 LMSGQYNSKVDMWALGLIMAELITFHPL-FPG 202
+ G + K D+W+ G+++ E++T + +PG
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 70
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 71 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA-INYGT 188
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 68
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA-INYGT 186
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 42/312 (13%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL-------QDCPKARREVELHWRAS 112
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E S T T Y AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
E +L +Y+ D W+LG+I L+ +P F Y SP ++
Sbjct: 233 E-VLGPEKYDKSCDXWSLGVIXYILLCGYPPF---------YSNHGLAISPGXKTR---- 278
Query: 229 ELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCL 288
+ Y+FP + + +S ++ LI L +P +R T E HP
Sbjct: 279 --IRXGQYEFPNPEWSEVS-------EEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQST 329
Query: 289 QVPSMSIDSCKM 300
+VP + + ++
Sbjct: 330 KVPQTPLHTSRV 341
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 69
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 70 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA-INYGT 187
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 79 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ E D + +
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 198 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 230
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 85 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 143
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 204 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 236
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 78 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 197 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 70 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 128
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ E D + +
Sbjct: 129 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 189 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 76 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 134
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 135 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 195 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 227
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
M++ L++ IG+G FG V + G VA+K +K + L E + ++ H
Sbjct: 192 MKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLR-H 245
Query: 61 PNIVKL-QELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N+V+L + E LY V EYM + L S + + + + + + Y+
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 118 HRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
+ HRDL ++N+LVS D + K++DFGL E S + +++ APE L +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEA-LREKK 362
Query: 177 YNSKVDMWALGLIMAELITF----HPLFP 201
+++K D+W+ G+++ E+ +F +P P
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 76
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 77 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA-INYGT 194
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V E M+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 77
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 78 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA-INYGT 195
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ +GEG FGKV + +GE VA+KALK +E+ LR + H +
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY-HEH 77
Query: 63 IVKLQELASENYR--LYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
I+K + + L V EY+ +L + + A++ + QI +G+ Y+H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP--RHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAPEML 171
Q Y HR+L ++N+L+ ND +KI DFGLA V P EY + + APE L
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWYAPECL 192
Query: 172 LMSGQYNSKVDMWALGLIMAELIT 195
Y + D+W+ G+ + EL+T
Sbjct: 193 KEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 78 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 197 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 79 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 198 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 230
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 77
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V E M+ +L + F+ ++ I G+ Y+
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
GY HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 197 -KFTSASDVWSYGIVLWEVMSY 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 68
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA-INYGT 186
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 72 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 191 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 223
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 63/310 (20%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
+ + K +G G+FGKV +A IK + VA+K LK + E + E+K L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMDC---NLHQLMSNRKQCFSEAEVK--------- 104
+ NH NIV L + + EY C +L + ++ F ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 105 --------NWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPP 155
++ +Q+ +G+ ++ + HRDL ++N+L+++ I KI DFGLA ++ +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 156 YT---EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF-HPLFPGTCEDDQLYK 211
Y +++ APE + + Y + D+W+ G+ + EL + +PG D + YK
Sbjct: 201 YVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 259
Query: 212 ICNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPC 270
+ EG +L P EM I C DP
Sbjct: 260 MIK-----------EGFR------------------MLSPEHAPAEMYDIMKTCWDADPL 290
Query: 271 KRPTAAEALQ 280
KRPT + +Q
Sbjct: 291 KRPTFKQIVQ 300
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G FG+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 74
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 75 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA-INYGT 192
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 25/214 (11%)
Query: 5 TLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINN 59
L +++GEG+FGKV+ A +Q VA+K LK + + + +E + L +
Sbjct: 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH-REAELLTNLQ- 73
Query: 60 HPNIVKLQELASENYRLYFVFEYMD-CNLHQLM------------SNRKQCFSEAEVKNW 106
H +IVK + E L VFEYM +L++ + N +++++ +
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT---EYITT 162
QI G+ Y+ Q + HRDL ++N LV N +KI DFG++ +V S Y +
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ PE + M ++ ++ D+W+LG+++ E+ T+
Sbjct: 194 IRWMPPESI-MYRKFTTESDVWSLGVVLWEIFTY 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ +GEG FGKV + +GE VA+KALK +E+ LR + H +
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY-HEH 77
Query: 63 IVKLQELASENYR--LYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
I+K + + L V EY+ +L + + A++ + QI +G+ Y+H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP--RHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAPEML 171
Q Y HR+L ++N+L+ ND +KI DFGLA V P EY + + APE L
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV---PEGHEYYRVREDGDSPVFWYAPECL 192
Query: 172 LMSGQYNSKVDMWALGLIMAELIT 195
Y + D+W+ G+ + EL+T
Sbjct: 193 KEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 31/275 (11%)
Query: 1 MEKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLKEVKCLRKINN 59
++ + + + +G+G FG V+ A +K+S VA+K L K +I L+ ++ +
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 60 HPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQC-FSEAEVKNWCFQILQGLNYM 117
HPNI++L + R+Y + EY L++ + +K C F E ++ L Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYC 139
Query: 118 HRQGYFHRDLISKNLLVSNDTIK-IADFGLAWEVDSCPPYTEYIT---TLQYRAPEMLLM 173
H + HRD+ +NLL+ IADFG W V + P T TL Y PEM+
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFG--WSVHA--PSLRRKTMCGTLDYLPPEMI-E 194
Query: 174 SGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA-----IGSPT-------- 220
+N KVD+W +G++ EL+ +P F ++ +I PT
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISK 254
Query: 221 --EESWAEGLELAKAHGYKFPKLQGNNLSLLIPSA 253
+ +E L LA+ + P ++ N+ +L PSA
Sbjct: 255 LLRHNPSERLPLAQVSAH--PWVRANSRRVLPPSA 287
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 63/309 (20%)
Query: 3 KYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKI 57
+ + K +G G+FGKV +A IK + VA+K LK + E + E+K L +
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 99
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDC---NLHQLMSNRKQCFSEAEVK---------- 104
NH NIV L + + EY C +L + ++ F ++
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 105 -------NWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPY 156
++ +Q+ +G+ ++ + HRDL ++N+L+++ I KI DFGLA ++ + Y
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 157 T---EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF-HPLFPGTCEDDQLYKI 212
+++ APE + + Y + D+W+ G+ + EL + +PG D + YK+
Sbjct: 218 VVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 276
Query: 213 CNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCK 271
EG +L P EM I C DP K
Sbjct: 277 IK-----------EGFR------------------MLSPEHAPAEMYDIMKTCWDADPLK 307
Query: 272 RPTAAEALQ 280
RPT + +Q
Sbjct: 308 RPTFKQIVQ 316
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 106
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 107 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 165
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N +V+ D T+KI DFG+ +E D + +
Sbjct: 166 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 225
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 226 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 63/309 (20%)
Query: 3 KYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKI 57
+ + K +G G+FGKV +A IK + VA+K LK + E + E+K L +
Sbjct: 42 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 101
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDC---NLHQLMSNRKQCFSEAEVK---------- 104
NH NIV L + + EY C +L + ++ F ++
Sbjct: 102 GNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 105 -------NWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPY 156
++ +Q+ +G+ ++ + HRDL ++N+L+++ I KI DFGLA ++ + Y
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 157 T---EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF-HPLFPGTCEDDQLYKI 212
+++ APE + + Y + D+W+ G+ + EL + +PG D + YK+
Sbjct: 220 VVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 278
Query: 213 CNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCK 271
EG +L P EM I C DP K
Sbjct: 279 IK-----------EGFR------------------MLSPEHAPAEMYDIMKTCWDADPLK 309
Query: 272 RPTAAEALQ 280
RPT + +Q
Sbjct: 310 RPTFKQIVQ 318
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 63/309 (20%)
Query: 3 KYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKI 57
+ + K +G G+FGKV +A IK + VA+K LK + E + E+K L +
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDC---NLHQLMSNRKQCFSEAEVK---------- 104
NH NIV L + + EY C +L + ++ F ++
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 105 -------NWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPY 156
++ +Q+ +G+ ++ + HRDL ++N+L+++ I KI DFGLA ++ + Y
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 157 T---EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF-HPLFPGTCEDDQLYKI 212
+++ APE + + Y + D+W+ G+ + EL + +PG D + YK+
Sbjct: 225 VVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 213 CNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCK 271
EG +L P EM I C DP K
Sbjct: 284 IK-----------EGFR------------------MLSPEHAPAEMYDIMKTCWDADPLK 314
Query: 272 RPTAAEALQ 280
RPT + +Q
Sbjct: 315 RPTFKQIVQ 323
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 137/327 (41%), Gaps = 48/327 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGE-YVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
E+Y ++ +GEG+FGKV + + G+ VA+K ++ + + E L E+ L+KI
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-VGKYREAARL-EINVLKKIKEK 76
Query: 61 PNIVK-LQELASENYRLY----FVFEYMDCNLHQ-LMSNRKQCFSEAEVKNWCFQILQGL 114
K L L S+ + + FE + N + L N Q + V++ +Q+ L
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 136
Query: 115 NYMHRQGYFHRDLISKNLL--------------------VSNDTIKIADFGLAWEVDSCP 154
++H H DL +N+L V N +I++ADFG A
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 194
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
+T + T YR PE++L G + D+W++G I+ E LF T E+ + +
Sbjct: 195 HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQ-THENREHLVMME 252
Query: 215 AIGSPTEESWAEGLELAK------------AHGYKFPKLQGNNLSLLIPSANDDEMSLIE 262
I P K + ++ K L + + + + L +
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 263 L---LCSWDPCKRPTAAEALQHPLFQG 286
L + +DP +R T AEAL HP F G
Sbjct: 313 LMRRMLEFDPAQRITLAEALLHPFFAG 339
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 137/327 (41%), Gaps = 48/327 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGE-YVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
E+Y ++ +GEG+FGKV + + G+ VA+K ++ + + E L E+ L+KI
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-VGKYREAARL-EINVLKKIKEK 108
Query: 61 PNIVK-LQELASENYRLY----FVFEYMDCNLHQ-LMSNRKQCFSEAEVKNWCFQILQGL 114
K L L S+ + + FE + N + L N Q + V++ +Q+ L
Sbjct: 109 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 168
Query: 115 NYMHRQGYFHRDLISKNLL--------------------VSNDTIKIADFGLAWEVDSCP 154
++H H DL +N+L V N +I++ADFG A
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 226
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
+T + T YR PE++L G + D+W++G I+ E LF T E+ + +
Sbjct: 227 HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQ-THENREHLVMME 284
Query: 215 AIGSPTEESWAEGLELAK------------AHGYKFPKLQGNNLSLLIPSANDDEMSLIE 262
I P K + ++ K L + + + + L +
Sbjct: 285 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 344
Query: 263 L---LCSWDPCKRPTAAEALQHPLFQG 286
L + +DP +R T AEAL HP F G
Sbjct: 345 LMRRMLEFDPAQRITLAEALLHPFFAG 371
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L +QIG G+FG+V+ + VA+K+ ++ + + L+E + L++ +HP
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHP 172
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQI---LQGLNYMH 118
NIV+L + ++ +Y V E + ++ + + VK + G+ Y+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 119 RQGYFHRDLISKNLLVS-NDTIKIADFGLAW-EVDSCPPYTEYI--TTLQYRAPEMLLMS 174
+ HRDL ++N LV+ + +KI+DFG++ E D + + +++ APE L
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEA-LNY 289
Query: 175 GQYNSKVDMWALGLIMAELITF 196
G+Y+S+ D+W+ G+++ E +
Sbjct: 290 GRYSSESDVWSFGILLWETFSL 311
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 137/327 (41%), Gaps = 48/327 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGE-YVAIKALKQRIYSWEECLNLKEVKCLRKINNH 60
E+Y ++ +GEG+FGKV + + G+ VA+K ++ + + E L E+ L+KI
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-VGKYREAARL-EINVLKKIKEK 85
Query: 61 PNIVK-LQELASENYRLY----FVFEYMDCNLHQ-LMSNRKQCFSEAEVKNWCFQILQGL 114
K L L S+ + + FE + N + L N Q + V++ +Q+ L
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 145
Query: 115 NYMHRQGYFHRDLISKNLL--------------------VSNDTIKIADFGLAWEVDSCP 154
++H H DL +N+L V N +I++ADFG A
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 203
Query: 155 PYTEYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
+T + T YR PE++L G + D+W++G I+ E LF T E+ + +
Sbjct: 204 HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQ-THENREHLVMME 261
Query: 215 AIGSPTEESWAEGLELAK------------AHGYKFPKLQGNNLSLLIPSANDDEMSLIE 262
I P K + ++ K L + + + + L +
Sbjct: 262 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 321
Query: 263 L---LCSWDPCKRPTAAEALQHPLFQG 286
L + +DP +R T AEAL HP F G
Sbjct: 322 LMRRMLEFDPAQRITLAEALLHPFFAG 348
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 54/304 (17%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCF-----------SEAEV 103
I +H N+V L ++ L + E+ NL + +++ F + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 104 KNWCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT---EY 159
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P Y +
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 160 ITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAIGS 218
L++ APE + Y + D+W+ G+++ E+ + +PG D++ C +
Sbjct: 207 RLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRL-- 260
Query: 219 PTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRPTAAE 277
EG + +A Y P EM L C +P +RPT +E
Sbjct: 261 ------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSE 296
Query: 278 ALQH 281
++H
Sbjct: 297 LVEH 300
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+K +G G+FG V++ I GE V AIK L++ L E + + + P
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS-PY 80
Query: 63 IVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+ +L + + +L C L + NR + S+ ++ NWC QI +G++Y+
Sbjct: 81 VSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQ-DLLNWCMQIAKGMSYLEDVR 139
Query: 122 YFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEMLLMSG 175
HRDL ++N+LV S + +KI DFGLA +D TEY +++ A E +L
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDI--DETEYHADGGKVPIKWMALESILRR- 196
Query: 176 QYNSKVDMWALGLIMAELITF 196
++ + D+W+ G+ + EL+TF
Sbjct: 197 RFTHQSDVWSYGVTVWELMTF 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
++ +GEG FGKV + +GE VA+KALK +E+ LR + H +
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY-HEH 94
Query: 63 IVKLQELASEN--YRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
I+K + + L V EY+ +L + + A++ + QI +G+ Y+H
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP--RHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAPEML 171
Q Y HRDL ++N+L+ ND +KI DFGLA V P E + + APE L
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV---PEGHEXYRVREDGDSPVFWYAPECL 209
Query: 172 LMSGQYNSKVDMWALGLIMAELIT 195
Y + D+W+ G+ + EL+T
Sbjct: 210 KEYKFYYAS-DVWSFGVTLYELLT 232
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 13/218 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 82
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q +G++Y+H +
Sbjct: 83 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 123 FHRDLISKNLLVSND-TIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM--SGQ 176
HRDL S N+ + D T+KI DFGLA E + + ++ + APE++ M S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
Y+ + D++A G+++ EL+T + DQ+ ++
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
EK T+ +++G+GSFG V++ +K + VAIK + + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 INNHPNIVKLQELASENYRLYFVFEYMD--------CNLHQLMSNRKQCF--SEAEVKNW 106
N H ++V+L + S+ + E M +L M N S +++
Sbjct: 72 FNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLA---WEVDSCPPYTEYITT 162
+I G+ Y++ + HRDL ++N V+ D T+KI DFG+ +E D + +
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+++ +PE L G + + D+W+ G+++ E+ T
Sbjct: 191 VRWMSPES-LKDGVFTTYSDVWSFGVVLWEIATL 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 63/309 (20%)
Query: 3 KYTLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKI 57
+ + K +G G+FGKV +A IK + VA+K LK + E + E+K L +
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 58 NNHPNIVKLQELASENYRLYFVFEYMDC---NLHQLMSNRKQCF---------------- 98
NH NIV L + + EY C +L + ++ F
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 99 -SEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPY 156
++ ++ +Q+ +G+ ++ + HRDL ++N+L+++ I KI DFGLA + + Y
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 157 T---EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF-HPLFPGTCEDDQLYKI 212
+++ APE + + Y + D+W+ G+ + EL + +PG D + YK+
Sbjct: 225 VVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 213 CNAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCK 271
EG +L P EM I C DP K
Sbjct: 284 IK-----------EGFR------------------MLSPEHAPAEMYDIMKTCWDADPLK 314
Query: 272 RPTAAEALQ 280
RPT + +Q
Sbjct: 315 RPTFKQIVQ 323
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEY---VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
K IG G FG+V K G+ VAIK LK + L E + + + HPNI+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 93
Query: 65 KLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L+ + ++ + + EYM+ +L + F+ ++ I G+ Y+
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 124 HRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N+LV+++ + K++DFG++ ++ P Y T +++ APE + ++
Sbjct: 154 HRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIAYR-KF 211
Query: 178 NSKVDMWALGLIMAELITF 196
S D+W+ G++M E++++
Sbjct: 212 TSASDVWSYGIVMWEVMSY 230
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L +QIG G+FG+V+ + VA+K+ ++ + + L+E + L++ +HP
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHP 172
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQI---LQGLNYMH 118
NIV+L + ++ +Y V E + ++ + + VK + G+ Y+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 119 RQGYFHRDLISKNLLVS-NDTIKIADFGLAW-EVDSCPPYTEYI--TTLQYRAPEMLLMS 174
+ HRDL ++N LV+ + +KI+DFG++ E D + + +++ APE L
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEA-LNY 289
Query: 175 GQYNSKVDMWALGLIMAELITF 196
G+Y+S+ D+W+ G+++ E +
Sbjct: 290 GRYSSESDVWSFGILLWETFSL 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKINNHPNIVK 65
++GEG FG V++ + VA+K L + E L + E+K + K H N+V+
Sbjct: 38 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVE 94
Query: 66 LQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQ------ILQGLNYMHR 119
L +S+ L V+ YM + + +R C +W + G+N++H
Sbjct: 95 LLGFSSDGDDLCLVYVYMP---NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPP---YTEYITTLQYRAPEMLLMSG 175
+ HRD+ S N+L+ T KI+DFGLA + + + T Y APE L G
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--RG 209
Query: 176 QYNSKVDMWALGLIMAELITFHP 198
+ K D+++ G+++ E+IT P
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 13/218 (5%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 82
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ ++ +L V ++ + +L+ + + F ++ + Q +G++Y+H +
Sbjct: 83 LLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 123 FHRDLISKNLLVSND-TIKIADFGLAWEV---DSCPPYTEYITTLQYRAPEMLLM--SGQ 176
HRDL S N+ + D T+KI DFGLA E + + ++ + APE++ M S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
Y+ + D++A G+++ EL+T + DQ+ ++
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 136/306 (44%), Gaps = 56/306 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F + ++
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 106 ----WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT--- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 158 EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNAI 216
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C +
Sbjct: 209 DARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRL 264
Query: 217 GSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRPTA 275
EG + +A Y P EM L C +P +RPT
Sbjct: 265 --------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRPTF 298
Query: 276 AEALQH 281
+E ++H
Sbjct: 299 SELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P Y
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 262
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 263 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 296
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 297 TFSELVEH 304
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 13/213 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 66
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 67 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 123 FHRDLISKNLLVSND-TIKIADFGLAWEVD---SCPPYTEYITTLQYRAPEMLLMSGQ-- 176
HRDL S N+ + D T+KI DFGLA E + + ++ + APE++ M +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P Y
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 244 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 299
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 300 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 333
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 334 TFSELVEH 341
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
E L++++G G G+VW + VA+K+LKQ S + L E ++++ H
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL--AEANLMKQLQ-HQ 68
Query: 62 NIVKLQELASENYRLYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
+V+L + ++ +Y + EYM+ + L + + ++ + QI +G+ ++
Sbjct: 69 RLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT--LQYRAPEMLLMSGQ 176
+ Y HRDL + N+LVS+ + KIADFGLA ++ +++ APE + G
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEA-INYGT 186
Query: 177 YNSKVDMWALGLIMAELITFHPL-FPG 202
+ K D+W+ G+++ E++T + +PG
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKINNHPNIVK 65
++GEG FG V++ + VA+K L + E L + E+K + K H N+V+
Sbjct: 32 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVE 88
Query: 66 LQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQ------ILQGLNYMHR 119
L +S+ L V+ YM + + +R C +W + G+N++H
Sbjct: 89 LLGFSSDGDDLCLVYVYMP---NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT---EYITTLQYRAPEMLLMSG 175
+ HRD+ S N+L+ T KI+DFGLA + + T Y APE L G
Sbjct: 146 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--RG 203
Query: 176 QYNSKVDMWALGLIMAELITFHP 198
+ K D+++ G+++ E+IT P
Sbjct: 204 EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 45/247 (18%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN---LKEVKCLRKINN 59
+ + + + EG F V++A SG A+K R+ S EE N ++EV ++K++
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALK----RLLSNEEEKNRAIIQEVCFMKKLSG 84
Query: 60 HPNIVKLQELA------SENYRLYFVFEYMDCNLHQLMSNRKQCFSEA-----EVKNWCF 108
HPNIV+ A S+ + F+ C QL+ K+ S V +
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFY 143
Query: 109 QILQGLNYMHRQG--YFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT-------- 157
Q + + +MHRQ HRDL +NLL+SN TIK+ DFG A + P Y+
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 158 --EYI---TTLQYRAPEMLLMSGQY--NSKVDMWALGLIMAELITF--HPLFPGTCEDDQ 208
E I TT YR PE++ + + K D+WALG I+ L+ F HP ED
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFRQHPF-----EDGA 257
Query: 209 LYKICNA 215
+I N
Sbjct: 258 KLRIVNG 264
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P Y
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 254 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 287
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 288 TFSELVEH 295
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKINNHPNIVK 65
++GEG FG V++ + VA+K L + E L + E+K + K H N+V+
Sbjct: 38 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVE 94
Query: 66 LQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQ------ILQGLNYMHR 119
L +S+ L V+ YM + + +R C +W + G+N++H
Sbjct: 95 LLGFSSDGDDLCLVYVYMP---NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT---EYITTLQYRAPEMLLMSG 175
+ HRD+ S N+L+ T KI+DFGLA + + T Y APE L G
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--RG 209
Query: 176 QYNSKVDMWALGLIMAELITFHP 198
+ K D+++ G+++ E+IT P
Sbjct: 210 EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 13/213 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 31 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 86
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 87 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 123 FHRDLISKNLLVSND-TIKIADFGLAWEVD---SCPPYTEYITTLQYRAPEMLLMSGQ-- 176
HRDL S N+ + D T+KI DFGLA E + + ++ + APE++ M +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P Y
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 254 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 287
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 288 TFSELVEH 295
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 13/213 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 39 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 94
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 95 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 123 FHRDLISKNLLVSND-TIKIADFGLAWEVD---SCPPYTEYITTLQYRAPEMLLMSGQ-- 176
HRDL S N+ + D T+KI DFGLA E + + ++ + APE++ M +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 177 YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 28/217 (12%)
Query: 5 TLMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINN 59
L +++GEG+FGKV+ A + VA+KALK + + +E + L +
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ-REAELLTNLQ- 75
Query: 60 HPNIVKLQELASENYRLYFVFEYMD-CNLHQLMSNR------------KQCFSE---AEV 103
H +IVK + + L VFEYM +L++ + +Q E +++
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 104 KNWCFQILQGLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYT---EY 159
+ QI G+ Y+ Q + HRDL ++N LV +N +KI DFG++ +V S Y
Sbjct: 136 LHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 160 ITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ PE + M ++ ++ D+W+ G+I+ E+ T+
Sbjct: 196 MLPIRWMPPESI-MYRKFTTESDVWSFGVILWEIFTY 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGE---YVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
++ K +G G FG+V K + VAIK LK + L E + + + HP
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HP 106
Query: 62 NIVKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
NI++L+ + +++ + V E M+ +L + F+ ++ I G+ Y+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 121 GYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMS 174
G HRDL ++N+L++++ + K++DFGL+ ++ P Y T +++ +PE +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ S D+W+ G+++ E++++
Sbjct: 226 -KFTSASDVWSYGIVLWEVMSY 246
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 10 IGEGSFGKVWQAIKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQ 67
IGEG+FG+V +A K+ G + AIK +K+ + E++ L K+ +HPNI+ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 68 ELASENYRLYFVFEYM-DCNLHQLMSNRK---------------QCFSEAEVKNWCFQIL 111
LY EY NL + + S ++ ++ +
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
+G++Y+ ++ + HRDL ++N+LV + + KIADFGL+ + T +++ A E
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES 212
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L S Y + D+W+ G+++ E+++
Sbjct: 213 LNYS-VYTTNSDVWSYGVLLWEIVSL 237
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 15/222 (6%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKIN 58
++Y L + +G G +V A + VA+K L+ + + + L+ E + +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 NHPNIVKLQELASENYRL----YFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
HP IV + + Y V EY+D + + + + + Q L
Sbjct: 71 -HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTE---YITTLQYRAPE 169
N+ H+ G HRD+ N+++S + +K+ DFG+A + DS T+ I T QY +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYK 211
+++ D+++LG ++ E++T P F G D Y+
Sbjct: 190 Q-ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 10 IGEGSFGKVWQAIKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQ 67
IGEG+FG+V +A K+ G + AIK +K+ + E++ L K+ +HPNI+ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 68 ELASENYRLYFVFEYM-DCNLHQLMSNRK---------------QCFSEAEVKNWCFQIL 111
LY EY NL + + S ++ ++ +
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
+G++Y+ ++ + HRDL ++N+LV + + KIADFGL+ + T +++ A E
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES 202
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L S Y + D+W+ G+++ E+++
Sbjct: 203 LNYS-VYTTNSDVWSYGVLLWEIVSL 227
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 113/220 (51%), Gaps = 17/220 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 15 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 70
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q +G++Y+H +
Sbjct: 71 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLM--S 174
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 175 GQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICN 214
Y+ + D++A G+++ EL+T + DQ+ ++
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 227
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 31/208 (14%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEYV---------AIKALKQRIYSWEECLNLKEVKCLRKIN 58
+ IG+G FG V+ GEY+ AIK+L RI ++ L +
Sbjct: 27 RVIGKGHFGVVYH------GEYIDQAQNRIQCAIKSLS-RITEMQQVEAFLREGLLMRGL 79
Query: 59 NHPNIVKLQELASENYRL-YFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
NHPN++ L + L + + YM +L Q + + ++ + ++ ++ Q+ +G+ Y
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEY 139
Query: 117 MHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEM----- 170
+ Q + HRDL ++N ++ T+K+ADFGLA ++ EY + Q+R +
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD----REYYSVQQHRHARLPVKWT 195
Query: 171 ---LLMSGQYNSKVDMWALGLIMAELIT 195
L + ++ +K D+W+ G+++ EL+T
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCF------SEAEVKN--- 105
I +H N+V L ++ L + E+ NL + +++ F E K+
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P Y
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 209 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 264
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 265 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 298
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 299 TFSELVEH 306
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 262
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 263 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 296
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 297 TFSELVEH 304
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 9 QIGEGSFGKVWQAIKKQSGEY--VAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
++G G+FG V Q + + + VAIK LKQ + ++E + + +++N P IV+L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN-PYIVRL 75
Query: 67 QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFHRD 126
+ + + LH+ + +++ + V Q+ G+ Y+ + + HRD
Sbjct: 76 IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 127 LISKN-LLVSNDTIKIADFGLAWEVDSCPPYTEYITT----LQYRAPEMLLMSGQYNSKV 181
L ++N LLV+ KI+DFGL+ + + Y + L++ APE + +++S+
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR-KFSSRS 194
Query: 182 DMWALGLIMAELITF 196
D+W+ G+ M E +++
Sbjct: 195 DVWSYGVTMWEALSY 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 254 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 287
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 288 TFSELVEH 295
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 66
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 67 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 177 --YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 114/235 (48%), Gaps = 33/235 (14%)
Query: 8 KQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
K +G G+FGKV +A K+ + VA+K LK ++ E+ + E+K + + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMS------------------NRKQCFSEAEVK 104
IV L + + + EY C L++ N ++ S ++
Sbjct: 112 IVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 105 NWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYT---EYI 160
++ Q+ QG+ ++ + HRD+ ++N+L++N + KI DFGLA ++ + Y
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 161 TTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELIT--FHPLFPGTCEDDQLYKIC 213
+++ APE + Y + D+W+ G+++ E+ + +P +PG + + YK+
Sbjct: 230 LPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILVNSKFYKLV 282
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 16 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 71
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 72 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 177 --YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 13 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 68
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 69 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 177 --YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 134/307 (43%), Gaps = 57/307 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 106 -----WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT-- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 158 -EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICNA 215
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 208 GDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRR 263
Query: 216 IGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRPT 274
+ EG + +A Y P EM L C +P +RPT
Sbjct: 264 L--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRPT 297
Query: 275 AAEALQH 281
+E ++H
Sbjct: 298 FSELVEH 304
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 253
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 254 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 287
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 288 TFSELVEH 295
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 16 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 71
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 72 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 177 --YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 6 LMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYS--WEECLNLKEVKCLRKIN 58
M+++GE FGKV++ + + VAIK LK + EE + LR
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE---FRHEAMLRARL 86
Query: 59 NHPNIVKLQELASENYRLYFVFEY-MDCNLHQLMSNR---------------KQCFSEAE 102
HPN+V L + +++ L +F Y +LH+ + R K +
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 103 VKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT---E 158
+ QI G+ Y+ H+DL ++N+LV + +KI+D GL EV + Y
Sbjct: 147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE +M G+++ D+W+ G+++ E+ ++
Sbjct: 207 SLLPIRWMAPEA-IMYGKFSIDSDIWSYGVVLWEVFSY 243
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 6 LMKQIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYS--WEECLNLKEVKCLRKIN 58
M+++GE FGKV++ + + VAIK LK + EE + LR
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE---FRHEAMLRARL 69
Query: 59 NHPNIVKLQELASENYRLYFVFEY-MDCNLHQLMSNR---------------KQCFSEAE 102
HPN+V L + +++ L +F Y +LH+ + R K +
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 103 VKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT---E 158
+ QI G+ Y+ H+DL ++N+LV + +KI+D GL EV + Y
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 159 YITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ +++ APE +M G+++ D+W+ G+++ E+ ++
Sbjct: 190 SLLPIRWMAPEA-IMYGKFSIDSDIWSYGVVLWEVFSY 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 31/232 (13%)
Query: 8 KQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
K +G G+FGKV +A K+ + VA+K LK ++ E+ + E+K + + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMS--NRKQ--------------CFSEAEVKNW 106
IV L + + + EY C L++ RK S ++ ++
Sbjct: 112 IVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT--- 162
Q+ QG+ ++ + HRD+ ++N+L++N + KI DFGLA ++ + Y
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELIT--FHPLFPGTCEDDQLYKI 212
+++ APE + Y + D+W+ G+++ E+ + +P +PG + + YK+
Sbjct: 230 VKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILVNSKFYKL 279
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 9 QIGEGSFGKVWQAI----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
++G G+FG V Q + KKQ VAIK LKQ + ++E + + +++N P IV
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQID--VAIKVLKQGTEKADTEEMMREAQIMHQLDN-PYIV 399
Query: 65 KLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
+L + + + LH+ + +++ + V Q+ G+ Y+ + + H
Sbjct: 400 RLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 125 RDLISKN-LLVSNDTIKIADFGLAWEVDSCPPYTEYITT----LQYRAPEMLLMSGQYNS 179
R+L ++N LLV+ KI+DFGL+ + + Y + L++ APE + +++S
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR-KFSS 518
Query: 180 KVDMWALGLIMAELITF 196
+ D+W+ G+ M E +++
Sbjct: 519 RSDVWSYGVTMWEALSY 535
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
L++++G+GSFG V W A ++ VA+K LK + S E ++ ++EV + ++
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 69
Query: 60 HPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
H N+++L + + ++ + L +L ++ F + + Q+ +G+ Y+
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLE 128
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEM 170
+ + HRDL ++NLL+ + D +KI DFGL + + P ++ ++R APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGL---MRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L + ++ D W G+ + E+ T+
Sbjct: 186 -LKTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 39 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 94
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 95 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 177 --YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
L++++G+GSFG V W A ++ VA+K LK + S E ++ ++EV + ++
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKT-VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 79
Query: 60 HPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
H N+++L + + ++ + L +L ++ F + + Q+ +G+ Y+
Sbjct: 80 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLE 138
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEM 170
+ + HRDL ++NLL+ + D +KI DFGL + + P ++ ++R APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGL---MRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L + ++ D W G+ + E+ T+
Sbjct: 196 -LKTRTFSHASDTWMFGVTLWEMFTY 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 58/308 (18%)
Query: 2 EKYTLMKQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK 56
++ L K +G G+FG+V +A K + VA+K LK+ E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 INNHPNIVKLQELASE-NYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKN--------- 105
I +H N+V L ++ L + E+ NL + +++ F +V
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 106 ------WCFQILQGLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYT- 157
+ FQ+ +G+ ++ + HRDL ++N+L+S + +KI DFGLA ++ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 158 --EYITTLQYRAPEMLLMSGQYNSKVDMWALGLIMAELITFHPL-FPGTCEDDQLYKICN 214
+ L++ APE + Y + D+W+ G+++ E+ + +PG D++ C
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CR 262
Query: 215 AIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLC-SWDPCKRP 273
+ EG + +A Y P EM L C +P +RP
Sbjct: 263 RL--------KEGTRM-RAPDYTTP-----------------EMYQTMLDCWHGEPSQRP 296
Query: 274 TAAEALQH 281
T +E ++H
Sbjct: 297 TFSELVEH 304
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 17/215 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 66
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ ++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 67 LLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 177 --YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 17/215 (7%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKINNHPNI 63
T+ ++IG GSFG V++ K G+ VA+K L + ++ K EV LRK H NI
Sbjct: 38 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRHVNI 93
Query: 64 VKLQELASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGY 122
+ +++ +L V ++ + +L+ + + F ++ + Q QG++Y+H +
Sbjct: 94 LLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 123 FHRDLISKNLLVSND-TIKIADFGLA-----WEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
HRDL S N+ + D T+KI DFGLA W + + ++ + APE++ M +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS--GSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 177 --YNSKVDMWALGLIMAELITFHPLFPGTCEDDQL 209
Y+ + D++A G+++ EL+T + DQ+
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK----- 56
E + ++K IG G+FG+V K + + A+K L + W E L E C R+
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNK----W-EMLKRAETACFREERDVL 128
Query: 57 INNHPN-IVKLQELASENYRLYFVFE-YMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
+N I L ++ LY V + Y+ +L L+S + E + + +++ +
Sbjct: 129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI 188
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFG--LAWEVDSCPPYTEYITTLQYRAPEML 171
+ +H+ Y HRD+ N+L+ N I++ADFG L D + + T Y +PE+L
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248
Query: 172 LM----SGQYNSKVDMWALGLIMAELI 194
G+Y + D W+LG+ M E++
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 113/227 (49%), Gaps = 25/227 (11%)
Query: 8 KQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
K +G G+FGKV +A K+ + VA+K LK ++ E+ + E+K + + H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKN-----------WCFQIL 111
IV L + + + EY C L R++ ++ + ++ + Q+
Sbjct: 104 IVNLLGACTHGGPVLVITEYC-CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT---LQYRA 167
QG+ ++ + HRD+ ++N+L++N + KI DFGLA ++ + Y +++ A
Sbjct: 163 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELIT--FHPLFPGTCEDDQLYKI 212
PE + Y + D+W+ G+++ E+ + +P +PG + + YK+
Sbjct: 223 PESIF-DCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILVNSKFYKL 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
L++++G+GSFG V W A ++ VA+K LK + S E ++ ++EV + ++
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 69
Query: 60 HPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
H N+++L + + ++ + L +L ++ F + + Q+ +G+ Y+
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLE 128
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEM 170
+ + HRDL ++NLL+ + D +KI DFGL + + P ++ ++R APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGL---MRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L + ++ D W G+ + E+ T+
Sbjct: 186 -LKTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
L++++G+GSFG V W A ++ VA+K LK + S E ++ ++EV + ++
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 79
Query: 60 HPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
H N+++L + + ++ + L +L ++ F + + Q+ +G+ Y+
Sbjct: 80 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLE 138
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEM 170
+ + HRDL ++NLL+ + D +KI DFGL + + P ++ ++R APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGL---MRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L + ++ D W G+ + E+ T+
Sbjct: 196 -LKTRTFSHASDTWMFGVTLWEMFTY 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 10 IGEGSFGKVWQAIKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQ 67
IGEG+FG+V +A K+ G + AIK +K+ + E++ L K+ +HPNI+ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 68 ELASENYRLYFVFEYM-DCNLHQLMSNRK---------------QCFSEAEVKNWCFQIL 111
LY EY NL + + S ++ ++ +
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEM 170
+G++Y+ ++ + HR+L ++N+LV + + KIADFGL+ + T +++ A E
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES 209
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L S Y + D+W+ G+++ E+++
Sbjct: 210 LNYS-VYTTNSDVWSYGVLLWEIVSL 234
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
L++++G+GSFG V W A ++ VA+K LK + S E ++ ++EV + ++
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 73
Query: 60 HPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
H N+++L + + ++ + L +L ++ F + + Q+ +G+ Y+
Sbjct: 74 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLE 132
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEM 170
+ + HRDL ++NLL+ + D +KI DFGL + + P ++ ++R APE
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGL---MRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L + ++ D W G+ + E+ T+
Sbjct: 190 -LKTRTFSHASDTWMFGVTLWEMFTY 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
L++++G+GSFG V W A ++ VA+K LK + S E ++ ++EV + ++
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 69
Query: 60 HPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
H N+++L + + ++ + L +L ++ F + + Q+ +G+ Y+
Sbjct: 70 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLE 128
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEM 170
+ + HRDL ++NLL+ + D +KI DFGL + + P ++ ++R APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGL---MRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L + ++ D W G+ + E+ T+
Sbjct: 186 -LKTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 31/232 (13%)
Query: 8 KQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
K +G G+FGKV +A K+ + VA+K LK ++ E+ + E+K + + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMS--NRKQ--------------CFSEAEVKNW 106
IV L + + + EY C L++ RK S ++ ++
Sbjct: 112 IVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 107 CFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT--- 162
Q+ QG+ ++ + HRD+ ++N+L++N + KI DFGLA ++ + Y
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 163 LQYRAPEMLLMSGQYNSKVDMWALGLIMAELIT--FHPLFPGTCEDDQLYKI 212
+++ APE + Y + D+W+ G+++ E+ + +P +PG + + YK+
Sbjct: 230 VKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILVNSKFYKL 279
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKIN 58
++Y L + +G G +V A + VA+K L+ + + + L+ E + +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 NHPNIVKLQELASENYRL----YFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
HP IV + + Y V EY+D + + + + + Q L
Sbjct: 71 -HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV----DSCPPYTEYITTLQYRAPE 169
N+ H+ G HRD+ N+L+S + +K+ DFG+A + +S I T QY +PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPG 202
+++ D+++LG ++ E++T P F G
Sbjct: 190 Q-ARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 113/228 (49%), Gaps = 25/228 (10%)
Query: 8 KQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
K +G G+FGKV +A K+ + VA+K LK ++ E+ + E+K + + H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKN-----------WCFQIL 111
IV L + + + EY C L R++ ++ + ++ + Q+
Sbjct: 112 IVNLLGACTHGGPVLVITEYC-CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 112 QGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPYTEYITT---LQYRA 167
QG+ ++ + HRD+ ++N+L++N + KI DFGLA ++ + Y +++ A
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 168 PEMLLMSGQYNSKVDMWALGLIMAELIT--FHPLFPGTCEDDQLYKIC 213
PE + Y + D+W+ G+++ E+ + +P +PG + + YK+
Sbjct: 231 PESIF-DCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILVNSKFYKLV 276
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 6 LMKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINN 59
L++++G+GSFG V W A ++ VA+K LK + S E ++ ++EV + ++
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD- 73
Query: 60 HPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH 118
H N+++L + + ++ + L +L ++ F + + Q+ +G+ Y+
Sbjct: 74 HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLE 132
Query: 119 RQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPPYTEYITTLQYR-------APEM 170
+ + HRDL ++NLL+ + D +KI DFGL + + P ++ ++R APE
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGL---MRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 171 LLMSGQYNSKVDMWALGLIMAELITF 196
L + ++ D W G+ + E+ T+
Sbjct: 190 -LKTRTFSHASDTWMFGVTLWEMFTY 214
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 66/311 (21%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNHPNIVKL 66
K +G GS G V Q G VA+K + + C + L E+K L + ++HPN+++
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRML-----IDFCDIALMEIKLLTESDDHPNVIRY 74
Query: 67 QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVK------NWCFQILQGLNYMHRQ 120
+ + LY E + NL L+ ++ +++ + QI G+ ++H
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 121 GYFHRDLISKNLLVSNDT--------------IKIADFGLAWEVDSCPPYTEYITTLQ-- 164
HRDL +N+LVS + I I+DFGL ++DS + + T L
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG--QSSFRTNLNNP 192
Query: 165 -----YRAPEMLLMSGQYNSK------VDMWALGLIMAELITFHPLFPGTCEDDQLYKIC 213
+RAPE+L S +K +D++++G + Y I
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYIL 233
Query: 214 NAIGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRP 273
+ P + ++ + + + +++ + LI A D LI + DP KRP
Sbjct: 234 SKGKHPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRP 288
Query: 274 TAAEALQHPLF 284
TA + L+HPLF
Sbjct: 289 TAMKVLRHPLF 299
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQ--------RIYSWEECLNLKEVKC 53
E Y ++K IG G+FG+V K S + A+K L + + WEE +
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE-------RD 127
Query: 54 LRKINNHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQ 112
+ N P +V+L ++ LY V EYM +L LMSN E K + +++
Sbjct: 128 IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVL 185
Query: 113 GLNYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPY--TEYITTLQYRAPE 169
L+ +H G HRD+ N+L+ + +K+ADFG ++D + T Y +PE
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPE 245
Query: 170 MLLMSGQ---YNSKVDMWALGLIMAELIT 195
+L G Y + D W++G+ + E++
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLV 274
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-------- 58
+K +G G FG V + + GE + I C+ + E K R+
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPV----------CIKVIEDKSGRQSFQAVTDHML 67
Query: 59 -----NHPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQ 112
+H +IV+L L + L V +Y+ +L + + + NW QI +
Sbjct: 68 AIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126
Query: 113 GLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPP------YTEYITTLQY 165
G+ Y+ G HR+L ++N+L+ S +++ADFG+A D PP Y+E T +++
Sbjct: 127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA---DLLPPDDKQLLYSEAKTPIKW 183
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
A E + G+Y + D+W+ G+ + EL+TF
Sbjct: 184 MALESIHF-GKYTHQSDVWSYGVTVWELMTF 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQEL 69
+G G+FG V +A K + VAIK ++ E + E++ L ++N HPNIVKL
Sbjct: 17 VGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVN-HPNIVKLYGA 70
Query: 70 ASENYRLYFVFEYMDC-NLHQLMSNRKQC--FSEAEVKNWCFQILQGLNYMHR---QGYF 123
+ V EY + +L+ ++ + ++ A +WC Q QG+ Y+H +
Sbjct: 71 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 124 HRDLISKN-LLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSKV 181
HRDL N LLV+ T+ KI DFG A ++ + T + + APE+ S Y+ K
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGS-NYSEKC 185
Query: 182 DMWALGLIMAELIT 195
D+++ G+I+ E+IT
Sbjct: 186 DVFSWGIILWEVIT 199
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 27/212 (12%)
Query: 9 QIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
++GEG+FGKV+ A + +Q VA+KALK+ S + +E + L + H +I
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTML-QHQHI 105
Query: 64 VKLQELASENYRLYFVFEYM---DCNL--------HQLMSNRKQC----FSEAEVKNWCF 108
V+ + +E L VFEYM D N +L++ + ++
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 109 QILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPY---TEYITTLQ 164
Q+ G+ Y+ + HRDL ++N LV +KI DFG++ ++ S Y + ++
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 165 YRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ PE +L ++ ++ D+W+ G+++ E+ T+
Sbjct: 226 WMPPESILYR-KFTTESDVWSFGVVLWEIFTY 256
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 27/212 (12%)
Query: 9 QIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
++GEG+FGKV+ A + +Q VA+KALK+ S + +E + L + H +I
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTML-QHQHI 76
Query: 64 VKLQELASENYRLYFVFEYM---DCNLH--------QLMSNRKQC----FSEAEVKNWCF 108
V+ + +E L VFEYM D N +L++ + ++
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 109 QILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT---EYITTLQ 164
Q+ G+ Y+ + HRDL ++N LV +KI DFG++ ++ S Y + ++
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 165 YRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ PE +L ++ ++ D+W+ G+++ E+ T+
Sbjct: 197 WMPPESILYR-KFTTESDVWSFGVVLWEIFTY 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 27/212 (12%)
Query: 9 QIGEGSFGKVWQA-----IKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNI 63
++GEG+FGKV+ A + +Q VA+KALK+ S + +E + L + H +I
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTML-QHQHI 82
Query: 64 VKLQELASENYRLYFVFEYM---DCNLH--------QLMSNRKQC----FSEAEVKNWCF 108
V+ + +E L VFEYM D N +L++ + ++
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 109 QILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYT---EYITTLQ 164
Q+ G+ Y+ + HRDL ++N LV +KI DFG++ ++ S Y + ++
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 165 YRAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
+ PE +L ++ ++ D+W+ G+++ E+ T+
Sbjct: 203 WMPPESILYR-KFTTESDVWSFGVVLWEIFTY 233
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 19/194 (9%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQEL 69
+G G+FG V +A K + VAIK ++ E + E++ L ++N HPNIVKL
Sbjct: 16 VGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVN-HPNIVKLYGA 69
Query: 70 ASENYRLYFVFEYMDC-NLHQLMSNRKQC--FSEAEVKNWCFQILQGLNYMHR---QGYF 123
+ V EY + +L+ ++ + ++ A +WC Q QG+ Y+H +
Sbjct: 70 CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 124 HRDLISKN-LLVSNDTI-KIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSKV 181
HRDL N LLV+ T+ KI DFG A ++ + T + + APE+ S Y+ K
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGS-NYSEKC 184
Query: 182 DMWALGLIMAELIT 195
D+++ G+I+ E+IT
Sbjct: 185 DVFSWGIILWEVIT 198
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKIN-------- 58
+K +G G FG V + + GE + I C+ + E K R+
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPV----------CIKVIEDKSGRQSFQAVTDHML 85
Query: 59 -----NHPNIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQ 112
+H +IV+L L L V +Y+ +L + + + NW QI +
Sbjct: 86 AIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 144
Query: 113 GLNYMHRQGYFHRDLISKNLLV-SNDTIKIADFGLAWEVDSCPP------YTEYITTLQY 165
G+ Y+ G HR+L ++N+L+ S +++ADFG+A D PP Y+E T +++
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA---DLLPPDDKQLLYSEAKTPIKW 201
Query: 166 RAPEMLLMSGQYNSKVDMWALGLIMAELITF 196
A E + G+Y + D+W+ G+ + EL+TF
Sbjct: 202 MALESIHF-GKYTHQSDVWSYGVTVWELMTF 231
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK----- 56
+ + ++K IG G+F +V KQ+G+ A+K + + W+ L EV C R+
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK----WD-MLKRGEVSCFREERDVL 115
Query: 57 INNHPN-IVKLQ-ELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQG 113
+N I +L ENY LY V EY + +L L+S + + + +I+
Sbjct: 116 VNGDRRWITQLHFAFQDENY-LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA 174
Query: 114 LNYMHRQGYFHRDLISKNLLVSN-DTIKIADFG--LAWEVDSCPPYTEYITTLQYRAPEM 170
++ +HR GY HRD+ N+L+ I++ADFG L D + T Y +PE+
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 171 L------LMSGQYNSKVDMWALGLIMAEL 193
L +G Y + D WALG+ E+
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEM 263
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKIN 58
++Y L + +G G +V A + VA+K L+ + + + L+ E + +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 NHPNIVKLQELASENYRL----YFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
HP IV + + Y V EY+D + + + + + Q L
Sbjct: 71 -HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTE---YITTLQYRAPE 169
N+ H+ G HRD+ N+++S + +K+ DFG+A + DS T+ I T QY +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPG 202
+++ D+++LG ++ E++T P F G
Sbjct: 190 Q-ARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 80 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 137
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 195
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 196 LHR-IYTHQSDVWSYGVTVWELMTF 219
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKINNHPNIVK 65
+ GEG FG V++ + VA+K L + E L + E+K K H N+V+
Sbjct: 29 KXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ-HENLVE 85
Query: 66 LQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQ------ILQGLNYMHR 119
L +S+ L V+ Y + + +R C +W + G+N++H
Sbjct: 86 LLGFSSDGDDLCLVYVYXP---NGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE 142
Query: 120 QGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPP---YTEYITTLQYRAPEMLLMSG 175
+ HRD+ S N+L+ T KI+DFGLA + + + T Y APE L G
Sbjct: 143 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--RG 200
Query: 176 QYNSKVDMWALGLIMAELITFHP 198
+ K D+++ G+++ E+IT P
Sbjct: 201 EITPKSDIYSFGVVLLEIITGLP 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 78 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 135
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 193
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMTF 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 76 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 133
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 191
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMTF 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 79 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 136
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 195 LHR-IYTHQSDVWSYGVTVWELMTF 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 77 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 134
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 192
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 193 LHR-IYTHQSDVWSYGVTVWELMTF 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E M+ +L ++ R E +++ +Q+L+ +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 127
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 186
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMV 208
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 35/288 (12%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
+ +IG G++G V + + K SG+ +A+K ++ + E+ L ++ + + ++ P IV+
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 67 QELASENYRLYFVFEYMDCNLHQ----LMSNRKQCFSEAEVKNWCFQILQGLNYMHRQ-G 121
+ E M + + + S E + ++ LN++
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 122 YFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ---Y 177
HRD+ N+L+ + IK+ DFG++ ++ T Y APE + S Y
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGY 206
Query: 178 NSKVDMWALGLIMAELITFHPLFPG-TCEDDQLYKICNAIGSPTEESWAEGLELAKAHGY 236
+ + D+W+LG+ + EL T +P DQL ++ G P + S +E E + +
Sbjct: 207 DVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQLSNSEEREFSPSF-- 262
Query: 237 KFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLF 284
++ + L + D KRP E L+HP
Sbjct: 263 ---------------------INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQEL 69
+G+G+ V++ K++G+ AIK + + ++E + L+K+ NH NIVKL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAI 75
Query: 70 ASENYRLY--FVFEYMDC-NLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYMHRQGYFH 124
E + + E+ C +L+ ++ + E+E ++ G+N++ G H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 125 RDLISKNLL--VSND---TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS----- 174
R++ N++ + D K+ DFG A E++ + T +Y P+M +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKD 195
Query: 175 --GQYNSKVDMWALGLIMAELIT----FHPLFPGTCEDDQLYKICNAIGSPT 220
+Y + VD+W++G+ T F P + +YKI G P+
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT--GKPS 245
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 73 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAEGMNYL 130
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 131 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 188
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 189 LHR-IYTHQSDVWSYGVTVWELMTF 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 79 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 136
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 195 LHR-IYTHQSDVWSYGVTVWELMTF 218
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 10 IGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQEL 69
+G+G+ V++ K++G+ AIK + + ++E + L+K+ NH NIVKL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAI 75
Query: 70 ASENYRLY--FVFEYMDC-NLHQLMSNRKQCFS--EAEVKNWCFQILQGLNYMHRQGYFH 124
E + + E+ C +L+ ++ + E+E ++ G+N++ G H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 125 RDLISKNLL--VSND---TIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMS----- 174
R++ N++ + D K+ DFG A E++ + T +Y P+M +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKD 195
Query: 175 --GQYNSKVDMWALGLIMAELIT----FHPLFPGTCEDDQLYKICNAIGSPT 220
+Y + VD+W++G+ T F P + +YKI G P+
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT--GKPS 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 76 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 133
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 191
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMTF 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 79 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 136
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 195 LHR-IYTHQSDVWSYGVTVWELMTF 218
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 78 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 135
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 193
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMTF 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 76 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 133
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 191
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMTF 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 83 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 140
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 198
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMTF 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 82 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 139
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 140 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 197
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 198 LHR-IYTHQSDVWSYGVTVWELMTF 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 70 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 127
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 128 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 185
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 186 LHR-IYTHQSDVWSYGVTVWELMTF 209
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK----- 56
E + ++K IG G+FG+V K + A+K L + WE L E C R+
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WE-MLKRAETACFREERDVL 128
Query: 57 INNHPN-IVKLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
+N I L + LY V +Y + +L L+S + E + + +++ +
Sbjct: 129 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 188
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFG--LAWEVDSCPPYTEYITTLQYRAPEML 171
+ +H+ Y HRD+ N+L+ N I++ADFG L D + + T Y +PE+L
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 172 LM----SGQYNSKVDMWALGLIMAELI 194
G+Y + D W+LG+ M E++
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 62/309 (20%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNHPNIVKL 66
K +G GS G V Q G VA+K + + C + L E+K L + ++HPN+++
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRM-----LIDFCDIALMEIKLLTESDDHPNVIRY 74
Query: 67 QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVK------NWCFQILQGLNYMHRQ 120
+ + LY E + NL L+ ++ +++ + QI G+ ++H
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 121 GYFHRDLISKNLLVSNDT--------------IKIADFGLAWEVDSCPPY-----TEYIT 161
HRDL +N+LVS + I I+DFGL ++DS
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 162 TLQYRAPEMLLMSGQYNSK------VDMWALGLIMAELITFHPLFPGTCEDDQLYKICNA 215
T +RAPE+L S +K +D++++G + Y I +
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYILSK 235
Query: 216 IGSPTEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTA 275
P + ++ + + + +++ + LI A D LI + DP KRPTA
Sbjct: 236 GKHPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTA 290
Query: 276 AEALQHPLF 284
+ L+HPLF
Sbjct: 291 MKVLRHPLF 299
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRK----- 56
E + ++K IG G+FG+V K + A+K L + WE L E C R+
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WE-MLKRAETACFREERDVL 144
Query: 57 INNHPN-IVKLQELASENYRLYFVFEY-MDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
+N I L + LY V +Y + +L L+S + E + + +++ +
Sbjct: 145 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 204
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFG--LAWEVDSCPPYTEYITTLQYRAPEML 171
+ +H+ Y HRD+ N+L+ N I++ADFG L D + + T Y +PE+L
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 172 LM----SGQYNSKVDMWALGLIMAELI 194
G+Y + D W+LG+ M E++
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 79 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 136
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 194
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 195 LHR-IYTHQSDVWSYGVTVWELMTF 218
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 86 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 143
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 144 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 201
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 202 LHR-IYTHQSDVWSYGVTVWELMTF 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V++ K SG +A K + I ++E++ L + N+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-RQ 120
IV + + E+MD + + E + +++GL Y+ +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y +PE L Y+
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-QGTHYS 181
Query: 179 SKVDMWALGLIMAEL-ITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ D+W++GL + E+ + +P+ P ++ +L C G E
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKIN 58
++Y L + +G G +V A + VA+K L+ + + + L+ E + +N
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 87
Query: 59 NHPNIVKLQELASENYRL----YFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
HP IV + + Y V EY+D + + + + + Q L
Sbjct: 88 -HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTE---YITTLQYRAPE 169
N+ H+ G HRD+ N+++S + +K+ DFG+A + DS T+ I T QY +PE
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPG 202
+++ D+++LG ++ E++T P F G
Sbjct: 207 Q-ARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V++ K SG +A K + I ++E++ L + N+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-RQ 120
IV + + E+MD + + E + +++GL Y+ +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y +PE L Y+
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-QGTHYS 181
Query: 179 SKVDMWALGLIMAEL-ITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ D+W++GL + E+ + +P+ P ++ +L C G E
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 116/214 (54%), Gaps = 22/214 (10%)
Query: 2 EKYTLMKQIGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLN-LKEVKCLRKI 57
+++TL + +G+G FG V +A +K++ G +V A+K LK I + + L+E C+++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 58 NNHPNIVKLQELASENY---RL---YFVFEYMD-CNLHQ-LMSNR--KQCFSEA--EVKN 105
+ HP++ KL ++ + RL + +M +LH L+++R + F+ +
Sbjct: 83 D-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 106 WCFQILQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-- 162
+ I G+ Y+ + + HRDL ++N +++ D T+ +ADFGL+ ++ S Y + +
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 163 -LQYRAPEMLLMSGQYNSKVDMWALGLIMAELIT 195
+++ A E L Y D+WA G+ M E++T
Sbjct: 202 PVKWLALES-LADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 101 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 158
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 159 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 216
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 217 LHR-IYTHQSDVWSYGVTVWELMTF 240
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKIN 58
++Y L + +G G +V A + VA+K L+ + + + L+ E + +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 NHPNIVKLQELASENYRL----YFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
HP IV + + Y V EY+D + + + + + Q L
Sbjct: 71 -HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTE---YITTLQYRAPE 169
N+ H+ G HRD+ N+++S + +K+ DFG+A + DS T+ I T QY +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPG 202
+++ D+++LG ++ E++T P F G
Sbjct: 190 Q-ARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+K +G G+FG V++ I GE V AIK L + + E + ++ HP+
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD-HPH 101
Query: 63 IVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+V+L + S +L C L + ++ S+ + NWC QI +G+ Y+ +
Sbjct: 102 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL-LLNWCVQIAKGMMYLEERR 160
Query: 122 YFHRDLISKNLLV-SNDTIKIADFGLA---------WEVDS--CPPYTEYITTLQYRAPE 169
HRDL ++N+LV S + +KI DFGLA + D P + + YR
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR--- 217
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITF 196
++ + D+W+ G+ + EL+TF
Sbjct: 218 ------KFTHQSDVWSYGVTIWELMTF 238
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V++ K SG +A K + I ++E++ L + N+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-RQ 120
IV + + E+MD + + E + +++GL Y+ +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y +PE L Y+
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-QGTHYS 181
Query: 179 SKVDMWALGLIMAEL-ITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ D+W++GL + E+ + +P+ P ++ +L C G E
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V++ K SG +A K + I ++E++ L + N+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-RQ 120
IV + + E+MD + + E + +++GL Y+ +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y +PE L Y+
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-QGTHYS 181
Query: 179 SKVDMWALGLIMAEL-ITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ D+W++GL + E+ + +P+ P ++ +L C G E
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 129/327 (39%), Gaps = 49/327 (14%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 128
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 173 MSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAK 232
+ +W+LG+++ ++ +C I +E G +
Sbjct: 188 YHRYHGRSAAVWSLGILLYDM------------------VCGDIPFEHDEEIIRGQVFFR 229
Query: 233 AHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGCLQVPS 292
+ + LI + P RPT E HP Q L +P
Sbjct: 230 QR------------------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL-LPQ 270
Query: 293 MSIDSCKMRLTPSAKKSGWKAKLIVWF 319
+ + L+P KSG + ++F
Sbjct: 271 ETAEIHLHSLSPGPSKSGPSSGENLYF 297
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V++ K SG +A K + I ++E++ L + N+ P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 126
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-RQ 120
IV + + E+MD + + E + +++GL Y+ +
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y +PE L Y+
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-QGTHYS 243
Query: 179 SKVDMWALGLIMAEL-ITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ D+W++GL + E+ + +P+ P ++ +L C G E
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 287
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQ--------RIYSWEECLNLKEVKC 53
E Y ++K IG G+FG+V K + + A+K L + + WEE +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE-------RD 126
Query: 54 LRKINNHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQ 112
+ N P +V+L ++ LY V EYM +L LMSN E + + +++
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVL 184
Query: 113 GLNYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYR 166
L+ +H G+ HRD+ N+L+ +K+ADFG +++ C + T Y
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DTAVGTPDYI 241
Query: 167 APEMLLM---SGQYNSKVDMWALGLIMAELIT 195
+PE+L G Y + D W++G+ + E++
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 8/210 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V++ K SG +A K + I ++E++ L + N+ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 64
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-RQ 120
IV + + E+MD + + E + +++GL Y+ +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y +PE L Y+
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-QGTHYS 181
Query: 179 SKVDMWALGLIMAEL-ITFHPLFPGTCEDD 207
+ D+W++GL + E+ + +P+ P ++D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 127/313 (40%), Gaps = 65/313 (20%)
Query: 1 MEKYTLMKQI-GEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK-EVKCLRKIN 58
++ Y + Q+ G G GKV Q K++ E A+K L ++C + EV+ + +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 59 NHPNIVKLQELASENYR----LYFVFEYMDCN--LHQLMSNRKQCFSEAEVKNWCFQILQ 112
P+IV++ ++ Y L V E +D ++ Q F+E E I +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 113 GLNYMHRQGYFHRDLISKNLLVS----NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAP 168
+ Y+H HRD+ +NLL + N +K+ DFG A E
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------ 170
Query: 169 EMLLMSGQYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGL 228
+Y+ DMW+LG+IM L+ +P F Y SP G+
Sbjct: 171 ----TGEKYDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISP-------GM 210
Query: 229 ELAKAHG-YKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHPLFQGC 287
+ G Y+FP + + +S ++ LI L +P +R T E + HP
Sbjct: 211 KTRIRMGQYEFPNPEWSEVS-------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263
Query: 288 LQVPSMSIDSCKM 300
+VP + + ++
Sbjct: 264 TKVPQTPLHTSRV 276
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ ++ + +
Sbjct: 156 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E DS T +++ A E L + ++
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKF 273
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 274 TTKSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ ++ + +
Sbjct: 97 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E DS T +++ A E L + ++
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKF 214
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V++ K SG +A K + I ++E++ L + N+ P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 91
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-RQ 120
IV + + E+MD + + E + +++GL Y+ +
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 121 GYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQYN 178
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y +PE L Y+
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL-QGTHYS 208
Query: 179 SKVDMWALGLIMAEL-ITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ D+W++GL + E+ + +P+ P ++ +L C G E
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+ Q+G+G+FG V + + +G VA+K L+ + +E++ L+ +++
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSD-F 69
Query: 63 IVKLQELASENYR--LYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
IVK + ++ R L V EY+ L + + + + + QI +G+ Y+
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLA----WEVDSCPPYTEYITTLQYRAPEMLLMS 174
+ HRDL ++N+LV ++ +KIADFGLA + D + + + APE L
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES-LSD 188
Query: 175 GQYNSKVDMWALGLIMAELITF 196
++ + D+W+ G+++ EL T+
Sbjct: 189 NIFSRQSDVWSFGVVLYELFTY 210
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQ--------RIYSWEECLNLKEVKC 53
E Y ++K IG G+FG+V K + + A+K L + + WEE +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE-------RD 126
Query: 54 LRKINNHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQ 112
+ N P +V+L ++ LY V EYM +L LMSN E + + +++
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVL 184
Query: 113 GLNYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYR 166
L+ +H G+ HRD+ N+L+ +K+ADFG +++ C + T Y
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DTAVGTPDYI 241
Query: 167 APEMLLM---SGQYNSKVDMWALGLIMAELIT 195
+PE+L G Y + D W++G+ + E++
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 NN-HPNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 123
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMV 204
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 31/214 (14%)
Query: 6 LMKQIGEGSFGKVWQA-IKKQSGEY--VAIKALKQRIYSWEECLN-LKEVKCLRKINNHP 61
L K +GEG FG V + +K++ G VA+K +K S E L E C++ + HP
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS-HP 96
Query: 62 NIVKLQ----ELASENYRLYFVF----EYMDCNLHQLMSNRKQCFSEAEVKN---WCFQI 110
N+++L E++S+ V +Y D + + L S + ++ + I
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 111 LQGLNYMHRQGYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITTLQYRAPE 169
G+ Y+ + + HRDL ++N ++ +D T+ +ADFGL+ ++ S Y Q R +
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR------QGRIAK 210
Query: 170 M--------LLMSGQYNSKVDMWALGLIMAELIT 195
M L Y SK D+WA G+ M E+ T
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQ--------RIYSWEECLNLKEVKC 53
E Y ++K IG G+FG+V K + + A+K L + + WEE +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE-------RD 121
Query: 54 LRKINNHPNIVKLQELASENYRLYFVFEYM-DCNLHQLMSNRKQCFSEAEVKNWCFQILQ 112
+ N P +V+L ++ LY V EYM +L LMSN E + + +++
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVL 179
Query: 113 GLNYMHRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDS-----CPPYTEYITTLQYR 166
L+ +H G+ HRD+ N+L+ +K+ADFG +++ C + T Y
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DTAVGTPDYI 236
Query: 167 APEMLLM---SGQYNSKVDMWALGLIMAELIT 195
+PE+L G Y + D W++G+ + E++
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ ++ + +
Sbjct: 98 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E DS T +++ A E L + ++
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES-LQTQKF 215
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 216 TTKSDVWSFGVLLWELMT 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+K +G G+FG V++ I GE V AIK L + + E + ++ HP+
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD-HPH 78
Query: 63 IVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
+V+L + S +L C L + ++ S+ + NWC QI +G+ Y+ +
Sbjct: 79 LVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL-LLNWCVQIAKGMMYLEERR 137
Query: 122 YFHRDLISKNLLV-SNDTIKIADFGLA---------WEVDS--CPPYTEYITTLQYRAPE 169
HRDL ++N+LV S + +KI DFGLA + D P + + YR
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR--- 194
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITF 196
++ + D+W+ G+ + EL+TF
Sbjct: 195 ------KFTHQSDVWSYGVTIWELMTF 215
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ ++ + +
Sbjct: 98 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E DS T +++ A E L + ++
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKF 215
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 216 TTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ ++ + +
Sbjct: 102 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E DS T +++ A E L + ++
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKF 219
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 220 TTKSDVWSFGVLLWELMT 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ ++ + +
Sbjct: 97 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E DS T +++ A E L + ++
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKF 214
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 58/305 (19%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNHPNIVKL 66
K +G GS G V Q G VA+K + + C + L E+K L + ++HPN+++
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRM-----LIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 67 QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVK------NWCFQILQGLNYMHRQ 120
+ + LY E + NL L+ ++ +++ + QI G+ ++H
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 121 GYFHRDLISKNLLVSNDT--------------IKIADFGLAWEVDSCPPY-----TEYIT 161
HRDL +N+LVS + I I+DFGL ++DS
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 162 TLQYRAPEMLLMSG--QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSP 219
T +RAPE+L S + +D++++G + Y I + P
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHP 253
Query: 220 TEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEAL 279
+ ++ + + + +++ + LI A D LI + DP KRPTA + L
Sbjct: 254 FGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTAMKVL 308
Query: 280 QHPLF 284
+HPLF
Sbjct: 309 RHPLF 313
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNL-KEVKCLRKINN 59
+ + +++ IG+GSFGKV K + + A+K + KQ+ E N+ KE++ ++ +
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE- 73
Query: 60 HPNIVKLQELASENYRLYFVFEYM---DCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
HP +V L + ++ V + + D H L N F E VK + +++ L+Y
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYH-LQQNVH--FKEETVKLFICELVMALDY 130
Query: 117 MHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEML--LM 173
+ Q HRD+ N+L+ + + I DF +A + T T Y APEM
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 174 SGQYNSKVDMWALGLIMAELI 194
Y+ VD W+LG+ EL+
Sbjct: 191 GAGYSFAVDWWSLGVTAYELL 211
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 116 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 233
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 234 TTKSDVWSFGVLLWELMT 251
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ ++ + +
Sbjct: 95 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E DS T +++ A E L + ++
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES-LQTQKF 212
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 213 TTKSDVWSFGVLLWELMT 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 78 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 135
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFG A + + EY +++ A E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA--EEKEYHAEGGKVPIKWMALESI 193
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMTF 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 58/305 (19%)
Query: 8 KQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEEC-LNLKEVKCLRKINNHPNIVKL 66
K +G GS G V Q G VA+K + + C + L E+K L + ++HPN+++
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRM-----LIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 67 QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVK------NWCFQILQGLNYMHRQ 120
+ + LY E + NL L+ ++ +++ + QI G+ ++H
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 121 GYFHRDLISKNLLVSNDT--------------IKIADFGLAWEVDSCPPY-----TEYIT 161
HRDL +N+LVS + I I+DFGL ++DS
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 162 TLQYRAPEMLLMSG--QYNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSP 219
T +RAPE+L S + +D++++G + Y I + P
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHP 253
Query: 220 TEESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEAL 279
+ ++ + + + +++ + LI A D LI + DP KRPTA + L
Sbjct: 254 FGDKYSRESNIIRGI-FSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTAMKVL 308
Query: 280 QHPLF 284
+HPLF
Sbjct: 309 RHPLF 313
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 89 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 206
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 207 TTKSDVWSFGVLLWELMT 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLK---EVKCLRKIN 58
++Y L + +G G +V A + VA+K L+ + + + L+ E + +N
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALN 70
Query: 59 NHPNIVKLQELASENYRL----YFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
HP IV + Y V EY+D + + + + + Q L
Sbjct: 71 -HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 115 NYMHRQGYFHRDLISKNLLVS-NDTIKIADFGLAWEV-DSCPPYTE---YITTLQYRAPE 169
N+ H+ G HRD+ N+++S + +K+ DFG+A + DS T+ I T QY +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 170 MLLMSGQYNSKVDMWALGLIMAELITFHPLFPG 202
+++ D+++LG ++ E++T P F G
Sbjct: 190 Q-ARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 115 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 232
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 233 TTKSDVWSFGVLLWELMT 250
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + + + + M L + K + NWC QI +G+NY+
Sbjct: 77 N-PHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 192
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 193 LHR-IYTHQSDVWSYGVTVWELMTF 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 78 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 135
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFG A + + EY +++ A E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA--EEKEYHAEGGKVPIKWMALESI 193
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMTF 217
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 94 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 211
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 212 TTKSDVWSFGVLLWELMT 229
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 80 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 137
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFG A + + EY +++ A E +
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA--EEKEYHAEGGKVPIKWMALESI 195
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 196 LHR-IYTHQSDVWSYGVTVWELMTF 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 162
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 221
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMV 243
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 95 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 212
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 213 TTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 92 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 209
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 210 TTKSDVWSFGVLLWELMT 227
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 142
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 201
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMV 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 97 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 214
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 143
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMV 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 143
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMV 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 170
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 229
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMV 251
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 143
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMV 224
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 142
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 201
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMV 223
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K + G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 83 N-PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 140
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 198
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMTF 222
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 97 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 214
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+ Q+G+G+FG V + + +G VA+K L+ + +E++ L+ +++
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSD-F 73
Query: 63 IVKLQELASENYR--LYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
IVK + ++ R L V EY+ L + + + + + QI +G+ Y+
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAPEML 171
+ HRDL ++N+LV ++ +KIADFGLA + P +Y + + APE
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWYAPES- 189
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L ++ + D+W+ G+++ EL T+
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFTY 214
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 175
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 234
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMV 256
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 96 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 124 HRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTEYITT-----LQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA ++ Y+ + T +++ A E L + ++
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKF 213
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 214 TTKSDVWSFGVLLWELMT 231
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+ Q+G+G+FG V + + +G VA+K L+ + +E++ L+ +++
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSD-F 72
Query: 63 IVKLQELASENYR--LYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
IVK + ++ R L V EY+ L + + + + + QI +G+ Y+
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAPEML 171
+ HRDL ++N+LV ++ +KIADFGLA + P +Y + + APE
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWYAPES- 188
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L ++ + D+W+ G+++ EL T+
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFTY 213
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 170
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 229
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMV 251
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Query: 9 QIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKLQE 68
+IG GSF V++ + ++ VA L+ R + E KE K HPNIV+ +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 69 LASENYR----LYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG--Y 122
+ + V E + R + +++WC QIL+GL ++H +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 123 FHRDLISKNLLVSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQYNSK 180
HRDL N+ ++ T +KI D GLA + I T ++ APE +Y+
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEX--YEEKYDES 209
Query: 181 VDMWALGLIMAELIT 195
VD++A G E T
Sbjct: 210 VDVYAFGXCXLEXAT 224
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 7 MKQIGEGSFGKV----WQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
+ Q+G+G+FG V + + +G VA+K L+ + +E++ L+ +++
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSD-F 85
Query: 63 IVKLQELASENYR--LYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
IVK + ++ R L V EY+ L + + + + + QI +G+ Y+
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 120 QGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEYITTLQ-------YRAPEML 171
+ HRDL ++N+LV ++ +KIADFGLA + P +Y + + APE
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWYAPES- 201
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L ++ + D+W+ G+++ EL T+
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFTY 226
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMV 236
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 150
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 209
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMV 231
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 127
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 186
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMV 208
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 128
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMV 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Query: 2 EKYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
+ + + ++G G+ G V + + SG +A K + I ++E++ L + N+ P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS-P 74
Query: 62 NIVKLQELASENYRLYFVFEYMDC-NLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMH-R 119
IV + + E+MD +L Q++ K+ E + +L+GL Y+ +
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI-LGKVSIAVLRGLAYLREK 133
Query: 120 QGYFHRDLISKNLLV-SNDTIKIADFGLAWE-VDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRD+ N+LV S IK+ DFG++ + +DS ++ T Y APE L Y
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMAPERL-QGTHY 190
Query: 178 NSKVDMWALGLIMAEL-ITFHPLFP 201
+ + D+W++GL + EL + +P+ P
Sbjct: 191 SVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 78 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 135
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFG A + + EY +++ A E +
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA--EEKEYHAEGGKVPIKWMALESI 193
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMTF 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 NHPNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + + + + M L + K + NWC QI +G+NY+
Sbjct: 76 N-PHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 191
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMTF 215
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 NNH-PNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 128
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMV 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 NN-HPNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 123
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMV 204
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 83 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 140
Query: 118 HRQGYFHRDLISKNLLVSN-DTIKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFG A + + EY +++ A E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA--EEKEYHAEGGKVPIKWMALESI 198
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMTF 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 76 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 133
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFG A + + EY +++ A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA--EEKEYHAEGGKVPIKWMALESI 191
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMTF 215
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 58 NN-HPNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 126
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 185
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMV 207
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKAL-KQRIYSWEECLNLK----EVKCLRKI 57
+Y + +G G FG V+ I+ VAIK + K RI W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 NN-HPNIVKLQELASENYRLYFVFEYMDC--NLHQLMSNRKQCFSEAEVKNWCFQILQGL 114
++ +++L + + E + +L ++ R E +++ +Q+L+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 123
Query: 115 NYMHRQGYFHRDLISKNLLV--SNDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLL 172
+ H G HRD+ +N+L+ + +K+ DFG + YT++ T Y PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 173 MSGQYNSKVDMWALGLIMAELI 194
+ +W+LG+++ +++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMV 204
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 64/279 (22%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN-LKEVKCLRKIN-NH 60
+Y +++++G G F VW Q +VA+K +K + E L+ +K +KC+R+ + +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 61 PNIVKLQELASE-------NYRLYFVFEYMDCNLHQ-LMSNRKQCFSEAEVKNWCFQILQ 112
PN + +L + + VFE + +L + ++ + Q VK+ Q+LQ
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQ 151
Query: 113 GLNYMHRQ-GYFHRDLISKNLLVSNDTI---KIADFGLAWEVDSCPP------------- 155
GL+Y+H + H D+ +N+L+ D ++A W+ PP
Sbjct: 152 GLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAAD 211
Query: 156 ------------------------------YTEYITTLQYRAPEMLLMSGQYNSKVDMWA 185
+TE I T QYR+ E+L+ +G Y++ D+W+
Sbjct: 212 LLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAG-YSTPADIWS 270
Query: 186 LGLIMAELITFHPLF-PGTCED-----DQLYKICNAIGS 218
+ EL T LF P + ED D + I +GS
Sbjct: 271 TACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K + G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 76 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 133
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 191
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMTF 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K +G G+FG V++ + GE V AI L++ L E + ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 110 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 167
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 168 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 225
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 226 LHR-IYTHQSDVWSYGVTVWELMTF 249
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYV----AIKALKQRIYSWEECLNLKEVKCLRKIN 58
++ +K + G+FG V++ + GE V AIK L++ L E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 59 NHPNIVKLQELA-SENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM 117
N P++ +L + + +L C L + ++ S+ + NWC QI +G+NY+
Sbjct: 83 N-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY-LLNWCVQIAKGMNYL 140
Query: 118 HRQGYFHRDLISKNLLVSNDT-IKIADFGLAWEVDSCPPYTEY-----ITTLQYRAPEML 171
+ HRDL ++N+LV +KI DFGLA + + EY +++ A E +
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKWMALESI 198
Query: 172 LMSGQYNSKVDMWALGLIMAELITF 196
L Y + D+W+ G+ + EL+TF
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMTF 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 10 IGEGSFGKVWQA-IKKQSGEYV--AIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
IG G FG V+ + G+ + A+K+L RI E + K +HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 67 QE--LASENYRLYFVFEYMD-CNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYF 123
L SE L V YM +L + N + ++ + Q+ +G+ Y+ + +
Sbjct: 96 LGICLRSEGSPL-VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 124 HRDLISKNLLVSND-TIKIADFGLAW-----EVDSCPPYTEYITTLQYRAPEMLLMSGQY 177
HRDL ++N ++ T+K+ADFGLA E S T +++ A E L + ++
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES-LQTQKF 213
Query: 178 NSKVDMWALGLIMAELIT 195
+K D+W+ G+++ EL+T
Sbjct: 214 TTKSDVWSFGVLLWELMT 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 43/289 (14%)
Query: 4 YTLMKQ--IGEGSFGKVWQAIKKQSGEYVAIKALKQR-IYSWEECLNLKEVKCLRKINNH 60
YT+ K +G G FG+V + + +G +A K +K R + EE N E+ + +++ H
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN--EISVMNQLD-H 145
Query: 61 PNIVKLQELASENYRLYFVFEYMDCN-LHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
N+++L + + V EY+D L + + +E + + QI +G+ +MH+
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 120 QGYFHRDLISKNLL-VSNDT--IKIADFGLAWEVDSCPPYTEYITTLQYRAPEMLLMSGQ 176
H DL +N+L V+ D IKI DFGLA T ++ APE++
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV----N 261
Query: 177 YN---SKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTEESWAEGLELAKA 233
Y+ DMW++G+I L++ F G + + L I +E + + E AK
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKE 321
Query: 234 HGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQHP 282
K LLI SW R +A+EAL+HP
Sbjct: 322 FISK----------LLIKEK------------SW----RISASEALKHP 344
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 40/241 (16%)
Query: 8 KQIGEGSFGKVWQAI-----KKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPN 62
K +G G+FGKV +A K+ + VA+K LK ++ E+ + E+K + + H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 63 IVKLQELASENYRLYFVFEYMDCNLHQLMS--NRK-----------------------QC 97
IV L + + + EY C L++ RK +
Sbjct: 97 IVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 98 FSEAEVKNWCFQILQGLNYMHRQGYFHRDLISKNLLVSNDTI-KIADFGLAWEVDSCPPY 156
++ ++ Q+ QG+ ++ + HRD+ ++N+L++N + KI DFGLA ++ + Y
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 157 TEYITT---LQYRAPEMLLMSGQYNSKVDMWALGLIMAELIT--FHPLFPGTCEDDQLYK 211
+++ APE + Y + D+W+ G+++ E+ + +P +PG + + YK
Sbjct: 215 IVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILVNSKFYK 272
Query: 212 I 212
+
Sbjct: 273 L 273
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 58/304 (19%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIK------ALKQRIYSWEECLNLKEVKCLRKI 57
Y+++KQIG G KV+Q + ++ Y AIK A Q + S+ E+ L K+
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIY-AIKYVNLEEADNQTLDSYRN-----EIAYLNKL 63
Query: 58 NNHPN-IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H + I++L + + +Y V E + +L+ + +K+ E K++ +L+ ++
Sbjct: 64 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHT 122
Query: 117 MHRQGYFHRDLISKNLLVSNDTIKIADFGLAWEVDSCPPYTEYIT-----TLQYRAPEML 171
+H+ G H DL N L+ + +K+ DFG+A ++ P T + T+ Y PE +
Sbjct: 123 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI 180
Query: 172 --LMSGQYNS--------KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ S + N K D+W+LG I+ + F +Q+ K+ +AI P
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKL-HAIIDPN- 236
Query: 222 ESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
H +FP + +L +++ DP +R + E L H
Sbjct: 237 ------------HEIEFPDIPEKDLQ-----------DVLKCCLKRDPKQRISIPELLAH 273
Query: 282 PLFQ 285
P Q
Sbjct: 274 PYVQ 277
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIVKL 66
+ ++G G+ G+VW+ +++G +A+K +++ E L ++ + K ++ P IV+
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 67 QELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYM-HRQGYFHR 125
N ++ E M +L + E + I++ L Y+ + G HR
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 126 DLISKNLLVS-NDTIKIADFGLAWEVDSCPPYTEYITTLQYRAPEML----LMSGQYNSK 180
D+ N+L+ IK+ DFG++ + Y APE + Y+ +
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIR 209
Query: 181 VDMWALGLIMAELIT 195
D+W+LG+ + EL T
Sbjct: 210 ADVWSLGISLVELAT 224
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 100/368 (27%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKI-NNHP 61
+Y +++++G G F VW + Q ++VA+K +K + E L+ E++ L+ + N+ P
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD--EIRLLKSVRNSDP 79
Query: 62 N------IVKLQE----LASENYRLYFVFEYMDCNLHQ-LMSNRKQCFSEAEVKNWCFQI 110
N +V+L + + VFE + +L + ++ + Q VK Q+
Sbjct: 80 NDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQV 139
Query: 111 LQGLNYMHRQ-GYFHRDLISKNLLVSND---TIKIADFGLAWEVDSCPP----------- 155
LQGL+Y+H + H D+ +N+L+S + ++A W+ PP
Sbjct: 140 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 199
Query: 156 ----------------------------------YTEYITTLQYRAPEMLLMSGQYNSKV 181
+TE I T QYR+ E+L+ SG YN+
Sbjct: 200 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPA 258
Query: 182 DMWALGLIMAELITFHPLFPG------TCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
D+W+ + EL T LF T ++D + I +G + L +A +
Sbjct: 259 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK-----LIVAGKYS 313
Query: 236 YKFPKLQGN--NLSLLIP-------------------SANDDEMSLIELLCSWDPCKRPT 274
+F +G+ +++ L P D + ++EL+ P KR T
Sbjct: 314 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI----PEKRAT 369
Query: 275 AAEALQHP 282
AAE L+HP
Sbjct: 370 AAECLRHP 377
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 58/304 (19%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIK------ALKQRIYSWEECLNLKEVKCLRKI 57
Y+++KQIG G KV+Q + ++ Y AIK A Q + S+ E+ L K+
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIY-AIKYVNLEEADNQTLDSYRN-----EIAYLNKL 67
Query: 58 NNHPN-IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H + I++L + + +Y V E + +L+ + +K+ E K++ +L+ ++
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHT 126
Query: 117 MHRQGYFHRDLISKNLLVSNDTIKIADFGLAWEVDSCPPYTEYIT-----TLQYRAPEML 171
+H+ G H DL N L+ + +K+ DFG+A ++ P T + T+ Y PE +
Sbjct: 127 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI 184
Query: 172 --LMSGQYNS--------KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ S + N K D+W+LG I+ + F +Q+ K+ +AI P
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKL-HAIIDPN- 240
Query: 222 ESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
H +FP + +L +++ DP +R + E L H
Sbjct: 241 ------------HEIEFPDIPEKDLQ-----------DVLKCCLKRDPKQRISIPELLAH 277
Query: 282 PLFQ 285
P Q
Sbjct: 278 PYVQ 281
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 58/304 (19%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN------LKEVKCLRKI 57
Y+++KQIG G KV+Q + ++ Y AIK + + EE N E+ L K+
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIY-AIKYV-----NLEEADNQTLDSYRNEIAYLNKL 83
Query: 58 NNHPN-IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H + I++L + + +Y V E + +L+ + +K+ E K++ +L+ ++
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHT 142
Query: 117 MHRQGYFHRDLISKNLLVSNDTIKIADFGLAWEVDSCPPYTEYIT-----TLQYRAPEML 171
+H+ G H DL N L+ + +K+ DFG+A ++ P T + T+ Y PE +
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI 200
Query: 172 --LMSGQYNS--------KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ S + N K D+W+LG I+ + F +Q+ K+ +AI P
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKL-HAIIDPN- 256
Query: 222 ESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
H +FP + +L +++ DP +R + E L H
Sbjct: 257 ------------HEIEFPDIPEKDLQ-----------DVLKCCLKRDPKQRISIPELLAH 293
Query: 282 PLFQ 285
P Q
Sbjct: 294 PYVQ 297
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T ++G GSFG+V + KQ+G A+K ++ ++ EE + + + P IV
Sbjct: 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGL-------SSPRIV 113
Query: 65 KLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
L E + E ++ + + C E + Q L+GL Y+H + H
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 125 RDLISKNLLVSNDTIKIA--DFG--LAWEVDSCPP---YTEYI-TTLQYRAPEMLLMSGQ 176
D+ + N+L+S+D + A DFG L + D +YI T + APE ++M
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE-VVMGKP 232
Query: 177 YNSKVDMWALGLIMAELITF-HP 198
++KVD+W+ +M ++ HP
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 58/304 (19%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIK------ALKQRIYSWEECLNLKEVKCLRKI 57
Y+++KQIG G KV+Q + ++ Y AIK A Q + S+ E+ L K+
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIY-AIKYVNLEEADNQTLDSYR-----NEIAYLNKL 111
Query: 58 NNHPN-IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H + I++L + + +Y V E + +L+ + +K+ E K++ +L+ ++
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHT 170
Query: 117 MHRQGYFHRDLISKNLLVSNDTIKIADFGLAWEVDSCPPYTEYIT-----TLQYRAPEML 171
+H+ G H DL N L+ + +K+ DFG+A ++ P T + T+ Y PE +
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI 228
Query: 172 --LMSGQYNS--------KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ S + N K D+W+LG I+ + F +Q+ K+ +AI P
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKL-HAIIDPN- 284
Query: 222 ESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
H +FP + +L +++ DP +R + E L H
Sbjct: 285 ------------HEIEFPDIPEKDL-----------QDVLKCCLKRDPKQRISIPELLAH 321
Query: 282 PLFQ 285
P Q
Sbjct: 322 PYVQ 325
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEE---CLNLKEVKCLRKINNHP 61
T ++G GSFG+V + KQ+G A+K ++ ++ EE C L + P
Sbjct: 77 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGL----------SSP 126
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQG 121
IV L E + E ++ + + C E + Q L+GL Y+H +
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 186
Query: 122 YFHRDLISKNLLVSNDTIKIA--DFG--LAWEVDSCPP---YTEYI-TTLQYRAPEMLLM 173
H D+ + N+L+S+D + A DFG L + D +YI T + APE ++M
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE-VVM 245
Query: 174 SGQYNSKVDMWALGLIMAELITF-HP 198
++KVD+W+ +M ++ HP
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNHPNIV 64
+ +G G FG+V+ K +G+ A K L ++ + + E K L K+++ IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIV 248
Query: 65 KLQELASENYRLYFVFEYM---DCNLHQL-MSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
L L V M D H + F E + QI+ GL ++H++
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTE-YITTLQYRAPEMLLMSGQYN 178
+RDL +N+L+ +D ++I+D GLA E+ + T+ Y T + APE+LL +Y+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYD 367
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCE 205
VD +ALG+ + E+I F E
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNHPNIV 64
+ +G G FG+V+ K +G+ A K L ++ + + E K L K+++ IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIV 248
Query: 65 KLQELASENYRLYFVFEYM---DCNLHQL-MSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
L L V M D H + F E + QI+ GL ++H++
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTE-YITTLQYRAPEMLLMSGQYN 178
+RDL +N+L+ +D ++I+D GLA E+ + T+ Y T + APE+LL +Y+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYD 367
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCE 205
VD +ALG+ + E+I F E
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNHPNIV 64
+ +G G FG+V+ K +G+ A K L ++ + + E K L K+++ IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIV 248
Query: 65 KLQELASENYRLYFVFEYM---DCNLHQL-MSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
L L V M D H + F E + QI+ GL ++H++
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTE-YITTLQYRAPEMLLMSGQYN 178
+RDL +N+L+ +D ++I+D GLA E+ + T+ Y T + APE+LL +Y+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYD 367
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCE 205
VD +ALG+ + E+I F E
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 7 MKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN--LKEVKCLRKINNHPNIV 64
+ +G G FG+V+ K +G+ A K L ++ + + E K L K+++ IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIV 248
Query: 65 KLQELASENYRLYFVFEYM---DCNLHQL-MSNRKQCFSEAEVKNWCFQILQGLNYMHRQ 120
L L V M D H + F E + QI+ GL ++H++
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 121 GYFHRDLISKNLLVSND-TIKIADFGLAWEVDSCPPYTE-YITTLQYRAPEMLLMSGQYN 178
+RDL +N+L+ +D ++I+D GLA E+ + T+ Y T + APE+LL +Y+
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYD 367
Query: 179 SKVDMWALGLIMAELITFHPLFPGTCE 205
VD +ALG+ + E+I F E
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 100/368 (27%)
Query: 3 KYTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKI-NNHP 61
+Y +++++G G F VW + Q ++VA+K +K + E L+ E++ L+ + N+ P
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD--EIRLLKSVRNSDP 95
Query: 62 N------IVKLQE----LASENYRLYFVFEYMDCNLHQ-LMSNRKQCFSEAEVKNWCFQI 110
N +V+L + + VFE + +L + ++ + Q VK Q+
Sbjct: 96 NDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQV 155
Query: 111 LQGLNYMHRQ-GYFHRDLISKNLLVSND---TIKIADFGLAWEVDSCPP----------- 155
LQGL+Y+H + H D+ +N+L+S + ++A W+ PP
Sbjct: 156 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 215
Query: 156 ----------------------------------YTEYITTLQYRAPEMLLMSGQYNSKV 181
+TE I T QYR+ E+L+ SG YN+
Sbjct: 216 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPA 274
Query: 182 DMWALGLIMAELITFHPLFPG------TCEDDQLYKICNAIGSPTEESWAEGLELAKAHG 235
D+W+ + EL T LF T ++D + I +G + L +A +
Sbjct: 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK-----LIVAGKYS 329
Query: 236 YKFPKLQGN--NLSLLIP-------------------SANDDEMSLIELLCSWDPCKRPT 274
+F +G+ +++ L P D + ++EL+ P KR T
Sbjct: 330 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI----PEKRAT 385
Query: 275 AAEALQHP 282
AAE L+HP
Sbjct: 386 AAECLRHP 393
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 139/344 (40%), Gaps = 36/344 (10%)
Query: 4 YTLMKQIGEG--SFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHP 61
Y L+ IG+G V A K +GEYV ++ + S E L+ + K+ NHP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 62 NIVKLQELASENYRLYFVFEYMDCNLHQ--LMSNRKQCFSEAEVKNWCFQILQGLNYMHR 119
NIV + + L+ V +M + + ++ +E + +L+ L+Y+H
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 120 QGYFHRDLISKNLLVSNDTIKIADFGLAWE------------VDSCPPYTEYITTLQYRA 167
GY HR + + ++L+S D K+ GL V P Y+ + L + +
Sbjct: 147 MGYVHRSVKASHILISVDG-KVYLSGLRSNLSMISHGQRQRVVHDFPKYS--VKVLPWLS 203
Query: 168 PEMLLMSGQ-YNSKVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGS---PTEES 223
PE+L + Q Y++K D++++G+ EL H F L + N T
Sbjct: 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI 263
Query: 224 WAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMS-------------LIELLCSWDPC 270
AE L ++ + L + + +N D S +E +P
Sbjct: 264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPD 323
Query: 271 KRPTAAEALQHPLFQGCLQVPSMSIDSCKMRLTPSAKKSGWKAK 314
RP+A+ L H F+ + S ++ +TP G +++
Sbjct: 324 ARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQ 367
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 133/304 (43%), Gaps = 58/304 (19%)
Query: 4 YTLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLN------LKEVKCLRKI 57
Y+++KQIG G KV+Q + ++ Y AIK + + EE N E+ L K+
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIY-AIKYV-----NLEEADNQTLDSYRNEIAYLNKL 64
Query: 58 NNHPN-IVKLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNY 116
H + I++L + + +Y V E + +L+ + +K+ E K++ +L+ ++
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHT 123
Query: 117 MHRQGYFHRDLISKNLLVSNDTIKIADFGLAWEVDSCPPYTEYIT-----TLQYRAPEML 171
+H+ G H DL N L+ + +K+ DFG+A ++ P T + T+ Y PE +
Sbjct: 124 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI 181
Query: 172 --LMSGQYNS--------KVDMWALGLIMAELITFHPLFPGTCEDDQLYKICNAIGSPTE 221
+ S + N K D+W+LG I+ + F +Q+ K+ +AI P
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--NQISKL-HAIIDPN- 237
Query: 222 ESWAEGLELAKAHGYKFPKLQGNNLSLLIPSANDDEMSLIELLCSWDPCKRPTAAEALQH 281
H +FP + +L +++ DP +R + E L H
Sbjct: 238 ------------HEIEFPDIPEKDL-----------QDVLKCCLKRDPKQRISIPELLAH 274
Query: 282 PLFQ 285
P Q
Sbjct: 275 PYVQ 278
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 5 TLMKQIGEGSFGKVWQAIKKQSGEYVAIKALKQRIYSWEECLNLKEVKCLRKINNHPNIV 64
T ++G GSFG+V + KQ+G A+K ++ ++ EE + + + P IV
Sbjct: 75 THQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGL-------SSPRIV 127
Query: 65 KLQELASENYRLYFVFEYMDCNLHQLMSNRKQCFSEAEVKNWCFQILQGLNYMHRQGYFH 124
L E + E ++ + + C E + Q L+GL Y+H + H
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 125 RDLISKNLLVSNDTIKIA--DFG--LAWEVDSCPP---YTEYI-TTLQYRAPEMLLMSGQ 176
D+ + N+L+S+D + A DFG L + D +YI T + APE ++M
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE-VVMGKP 246
Query: 177 YNSKVDMWALGLIMAELITF-HP 198
++KVD+W+ +M ++ HP
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHP 269
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,793,820
Number of Sequences: 62578
Number of extensions: 434919
Number of successful extensions: 5016
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 1008
Number of HSP's gapped (non-prelim): 1262
length of query: 346
length of database: 14,973,337
effective HSP length: 100
effective length of query: 246
effective length of database: 8,715,537
effective search space: 2144022102
effective search space used: 2144022102
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)