Your job contains 1 sequence.
>039384
MHKSDDVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVA
PDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039384
(104 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053903 - symbol:cPT1 "cis-prenyltransferase 1... 188 1.1e-14 1
UNIPROTKB|Q9KPV6 - symbol:uppS "Ditrans,polycis-undecapre... 131 2.1e-08 1
TIGR_CMR|VC_2256 - symbol:VC_2256 "undecaprenyl diphospha... 131 2.1e-08 1
TAIR|locus:2175168 - symbol:cPT8 "cis-prenyltransferase 8... 128 5.9e-08 1
TAIR|locus:2175183 - symbol:cPT9 "cis-prenyltransferase 9... 126 9.9e-08 1
TIGR_CMR|CBU_1382 - symbol:CBU_1382 "undecaprenyl diphosp... 124 1.1e-07 1
UNIPROTKB|Q47SS3 - symbol:Tfu_0456 "(2Z,6E)-farnesyl diph... 124 1.4e-07 1
TIGR_CMR|NSE_0944 - symbol:NSE_0944 "undecaprenyl diphosp... 122 1.7e-07 1
UNIPROTKB|E1C3V5 - symbol:DHDDS "Uncharacterized protein"... 125 2.0e-07 1
UNIPROTKB|J9P7C8 - symbol:DHDDS "Uncharacterized protein"... 125 2.0e-07 1
UNIPROTKB|I3LU88 - symbol:I3LU88 "Uncharacterized protein... 118 2.3e-07 1
UNIPROTKB|H0Y4T1 - symbol:DHDDS "Dehydrodolichyl diphosph... 117 2.9e-07 1
UNIPROTKB|Q5T0A3 - symbol:DHDDS "Dehydrodolichyl diphosph... 117 5.0e-07 1
UNIPROTKB|D4A6Z6 - symbol:Dhdds "Protein Dhdds" species:1... 120 5.8e-07 1
TAIR|locus:505006702 - symbol:AT5G58784 species:3702 "Ara... 120 5.9e-07 1
TIGR_CMR|SPO_1665 - symbol:SPO_1665 "undecaprenyl diphosp... 117 7.4e-07 1
UNIPROTKB|Q58DN9 - symbol:DHDDS "Dehydrodolichyl diphosph... 118 1.1e-06 1
MGI|MGI:1914672 - symbol:Dhdds "dehydrodolichyl diphospha... 118 1.2e-06 1
TAIR|locus:505006701 - symbol:cPT6 "cis-prenyltransferase... 103 1.4e-06 2
UNIPROTKB|Q86SQ9 - symbol:DHDDS "Dehydrodolichyl diphosph... 117 1.5e-06 1
UNIPROTKB|Q5T0A6 - symbol:DHDDS "Dehydrodolichyl diphosph... 110 1.6e-06 1
UNIPROTKB|O53434 - symbol:MT1118 "(2Z,6E)-farnesyl diphos... 113 2.5e-06 1
RGD|1311560 - symbol:Dhdds "dehydrodolichyl diphosphate s... 115 2.6e-06 1
FB|FBgn0029980 - symbol:CG10778 species:7227 "Drosophila ... 112 4.4e-06 1
TIGR_CMR|GSU_1917 - symbol:GSU_1917 "undecaprenyl diphosp... 109 6.1e-06 1
TIGR_CMR|DET_0373 - symbol:DET_0373 "undecaprenyl diphosp... 108 7.1e-06 1
ZFIN|ZDB-GENE-040426-2236 - symbol:dhdds "dehydrodolichyl... 110 9.0e-06 1
UNIPROTKB|A0R2W4 - symbol:uppS "(2Z,6E)-farnesyl diphosph... 108 9.2e-06 1
UNIPROTKB|P60472 - symbol:ispU "subunit of undecaprenyl d... 107 1.1e-05 1
TAIR|locus:2046857 - symbol:AT2G23400 species:3702 "Arabi... 107 1.1e-05 1
UNIPROTKB|A0R0S4 - symbol:uppS "Decaprenyl diphosphate sy... 108 1.2e-05 1
TAIR|locus:2178823 - symbol:cPT4 "cis-prenyltransferase 4... 108 1.3e-05 1
TAIR|locus:2178838 - symbol:cPT5 "cis -prenyltransferase ... 107 1.6e-05 1
TIGR_CMR|CHY_1781 - symbol:CHY_1781 "undecaprenyl diphosp... 105 1.9e-05 1
TAIR|locus:2046867 - symbol:CPT "cis-prenyltransferase" s... 106 2.1e-05 1
TIGR_CMR|CPS_1557 - symbol:CPS_1557 "undecaprenyl diphosp... 103 3.1e-05 1
UNIPROTKB|Q97SR4 - symbol:uppS "Isoprenyl transferase" sp... 101 5.0e-05 1
GENEDB_PFALCIPARUM|MAL8P1.22 - symbol:MAL8P1.22 "dehydrod... 101 7.9e-05 1
UNIPROTKB|Q8IB97 - symbol:MAL8P1.22 "Dehydrodolichyl diph... 101 7.9e-05 1
TIGR_CMR|BA_3961 - symbol:BA_3961 "undecaprenyl diphospha... 99 8.8e-05 1
UNIPROTKB|Q47RM6 - symbol:Tfu_0853 "Trans,polycis-polypre... 99 0.00011 1
TIGR_CMR|SO_1633 - symbol:SO_1633 "undecaprenyl diphospha... 97 0.00017 1
UNIPROTKB|Q5T0A2 - symbol:DHDDS "Dehydrodolichyl diphosph... 94 0.00023 1
CGD|CAL0004730 - symbol:orf19.4028 species:5476 "Candida ... 95 0.00038 1
UNIPROTKB|P60479 - symbol:uppS "Decaprenyl diphosphate sy... 94 0.00041 1
DICTYBASE|DDB_G0291436 - symbol:DDB_G0291436 "Dehydrodoli... 96 0.00043 1
SGD|S000000206 - symbol:RER2 "Cis-prenyltransferase invol... 93 0.00049 1
WB|WBGene00044025 - symbol:T01G1.4 species:6239 "Caenorha... 93 0.00053 1
>TAIR|locus:2053903 [details] [associations]
symbol:cPT1 "cis-prenyltransferase 1" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 UniPathway:UPA00378 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006486 EMBL:AC007584
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AF387010
EMBL:AY072510 EMBL:AF499435 EMBL:AY954789 IPI:IPI00545370
PIR:G84553 RefSeq:NP_565420.1 UniGene:At.14588
ProteinModelPortal:Q8S2T1 SMR:Q8S2T1 STRING:Q8S2T1 PaxDb:Q8S2T1
PRIDE:Q8S2T1 EnsemblPlants:AT2G17570.1 GeneID:816264
KEGG:ath:AT2G17570 TAIR:At2g17570 HOGENOM:HOG000006053
InParanoid:Q8S2T1 OMA:IRVYFIG PhylomeDB:Q8S2T1
ProtClustDB:CLSN2688205 Genevestigator:Q8S2T1 GermOnline:AT2G17570
Uniprot:Q8S2T1
Length = 295
Score = 188 (71.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 47 KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+LVD+E++M M+VAP+PDI IRSSGETR SNFLLWQT N L SPAALW E
Sbjct: 218 QLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPE 268
>UNIPROTKB|Q9KPV6 [details] [associations]
symbol:uppS "Ditrans,polycis-undecaprenyl-diphosphate
synthase ((2E,6E)-farnesyl-diphosphate specific)" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0008360
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009252
eggNOG:COG0020 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF KO:K00806
GO:GO:0008834 PIR:F82099 RefSeq:NP_231887.1
ProteinModelPortal:Q9KPV6 SMR:Q9KPV6 DNASU:2613178 GeneID:2613178
KEGG:vch:VC2256 PATRIC:20083555 ProtClustDB:CLSK2517517
Uniprot:Q9KPV6
Length = 250
Score = 131 (51.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 28 DKLDGSQALKEKIDEDTIKKL-VDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D + +H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALWLE 97
+ +Y W E
Sbjct: 204 AYAEMYFTPVFWPE 217
>TIGR_CMR|VC_2256 [details] [associations]
symbol:VC_2256 "undecaprenyl diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0008360
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009252
eggNOG:COG0020 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF KO:K00806
GO:GO:0008834 PIR:F82099 RefSeq:NP_231887.1
ProteinModelPortal:Q9KPV6 SMR:Q9KPV6 DNASU:2613178 GeneID:2613178
KEGG:vch:VC2256 PATRIC:20083555 ProtClustDB:CLSK2517517
Uniprot:Q9KPV6
Length = 250
Score = 131 (51.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 28 DKLDGSQALKEKIDEDTIKKL-VDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D + +H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALWLE 97
+ +Y W E
Sbjct: 204 AYAEMYFTPVFWPE 217
>TAIR|locus:2175168 [details] [associations]
symbol:cPT8 "cis-prenyltransferase 8" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 UniPathway:UPA00378
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005789
GO:GO:0006486 EMBL:AB011483 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 EMBL:AY085488
IPI:IPI00539079 RefSeq:NP_200858.1 UniGene:At.29157
ProteinModelPortal:Q8LED0 SMR:Q8LED0 STRING:Q8LED0 PRIDE:Q8LED0
EnsemblPlants:AT5G60500.1 GeneID:836171 KEGG:ath:AT5G60500
TAIR:At5g60500 InParanoid:Q8LED0 OMA:DESTHIF PhylomeDB:Q8LED0
ProtClustDB:CLSN2686694 Genevestigator:Q8LED0 GermOnline:AT5G60500
Uniprot:Q8LED0
Length = 271
Score = 128 (50.1 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 41 DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
D+ + +L DVE+ M+ ++ P PD+ IR+ G R SNF+ WQTS L+ ALW E
Sbjct: 188 DDLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPE 244
>TAIR|locus:2175183 [details] [associations]
symbol:cPT9 "cis-prenyltransferase 9" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 UniPathway:UPA00378 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006486 EMBL:AB011483
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006053 ProtClustDB:CLSN2686694 EMBL:AY087655
IPI:IPI00549051 RefSeq:NP_200859.1 UniGene:At.29156
UniGene:At.71243 ProteinModelPortal:Q8LAR7 SMR:Q8LAR7 STRING:Q8LAR7
PRIDE:Q8LAR7 EnsemblPlants:AT5G60510.1 GeneID:836172
KEGG:ath:AT5G60510 TAIR:At5g60510 InParanoid:Q8LAR7 OMA:MNNTREE
PhylomeDB:Q8LAR7 Genevestigator:Q8LAR7 GermOnline:AT5G60510
Uniprot:Q8LAR7
Length = 272
Score = 126 (49.4 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 41 DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
D + +L D+E+ M+ +V P PD+ +R+ G R SNF+ WQTS L+ ALW E
Sbjct: 189 DGSSALELSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPE 245
>TIGR_CMR|CBU_1382 [details] [associations]
symbol:CBU_1382 "undecaprenyl diphosphate synthase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0008360 GO:GO:0046872 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0009252 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF KO:K00806
GO:GO:0008834 RefSeq:NP_820371.1 ProteinModelPortal:Q83BV5
PRIDE:Q83BV5 GeneID:1209288 KEGG:cbu:CBU_1382 PATRIC:17931509
ProtClustDB:CLSK914745 BioCyc:CBUR227377:GJ7S-1370-MONOMER
Uniprot:Q83BV5
Length = 237
Score = 124 (48.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 28 DKLDGSQALKEKI-DEDTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L Q + EKI +++ +L+ E ++ ++ P+PD+ IR+SGE R SNF+LWQ
Sbjct: 135 DILQAVQRMAEKIKNQELTSELMSAELFQNYLCLSDLPEPDLLIRTSGEQRLSNFMLWQF 194
Query: 84 SNCSLYSPAALW 95
+ +Y ALW
Sbjct: 195 AYTEIYFTPALW 206
>UNIPROTKB|Q47SS3 [details] [associations]
symbol:Tfu_0456 "(2Z,6E)-farnesyl diphosphate synthase"
species:269800 "Thermobifida fusca YX" [GO:0033850 "Z-farnesyl
diphosphate synthase activity" evidence=IDA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0046872 eggNOG:COG0020 HOGENOM:HOG000006056
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:CP000088 GenomeReviews:CP000088_GR
GO:GO:0033850 KO:K12503 OMA:LYTRGQP RefSeq:YP_288517.1
ProteinModelPortal:Q47SS3 SMR:Q47SS3 STRING:Q47SS3 GeneID:3579521
KEGG:tfu:Tfu_0456 PATRIC:23901328 ProtClustDB:CLSK2768831
Uniprot:Q47SS3
Length = 254
Score = 124 (48.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
+ L E++D D D+ KH++ PDPD+ IR+SGE R S FLLWQ+++ Y
Sbjct: 175 EELAERLDLD------DIAKHLYTRGQPDPDLLIRTSGEQRLSGFLLWQSAHSEFYFCEV 228
Query: 94 LW 95
W
Sbjct: 229 FW 230
>TIGR_CMR|NSE_0944 [details] [associations]
symbol:NSE_0944 "undecaprenyl diphosphate synthase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0020 HOGENOM:HOG000006056
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 OMA:IAYSELF KO:K00806 GO:GO:0004659
RefSeq:YP_506808.1 ProteinModelPortal:Q2GCI8 STRING:Q2GCI8
GeneID:3931651 KEGG:nse:NSE_0944 PATRIC:22681867
ProtClustDB:CLSK2528182 BioCyc:NSEN222891:GHFU-946-MONOMER
Uniprot:Q2GCI8
Length = 230
Score = 122 (48.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 35 ALKEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
A+ I + + VDV+K +++ PDPD+ IR++GE R SNFLLWQ+S LY
Sbjct: 143 AVSRMISDGLRAEEVDVQKFASYLYTDGIPDPDLIIRTAGEKRLSNFLLWQSSYSELYFC 202
Query: 92 AALWLEEKKK 101
LW + +K
Sbjct: 203 DTLWPDFTEK 212
>UNIPROTKB|E1C3V5 [details] [associations]
symbol:DHDDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016765 "transferase activity, transferring alkyl or
aryl (other than methyl) groups" evidence=IEA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 CTD:79947
GeneTree:ENSGT00390000007879 OMA:ETLRWCK EMBL:AADN02051390
IPI:IPI00589854 RefSeq:XP_417694.2 UniGene:Gga.31084
Ensembl:ENSGALT00000000525 GeneID:419543 KEGG:gga:419543
NextBio:20822582 Uniprot:E1C3V5
Length = 333
Score = 125 (49.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
D + L+D K ++ + +PDPD+ IR+SGE R S+FLLWQTS+ L + LW E
Sbjct: 182 DVSESLLD--KCLYTSNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPE 234
>UNIPROTKB|J9P7C8 [details] [associations]
symbol:DHDDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016765 "transferase activity, transferring
alkyl or aryl (other than methyl) groups" evidence=IEA]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 CTD:79947
OMA:IAYSELF GeneTree:ENSGT00390000007879 EMBL:AAEX03001720
RefSeq:XP_854980.2 Ensembl:ENSCAFT00000046729 GeneID:612157
KEGG:cfa:612157 Uniprot:J9P7C8
Length = 333
Score = 125 (49.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
D + L+D K ++ +P PDI IR+SGE R S+FLLWQTS+C L LW E
Sbjct: 182 DVSESLLD--KCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPE 234
>UNIPROTKB|I3LU88 [details] [associations]
symbol:I3LU88 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016765 "transferase activity, transferring alkyl or
aryl (other than methyl) groups" evidence=IEA] InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
GeneTree:ENSGT00390000007879 EMBL:FP236394
Ensembl:ENSSSCT00000029348 Uniprot:I3LU88
Length = 117
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-CSLYSPAALWLE 97
D + L+D K ++ +P PDI IR+SGE R S+FLLWQTS+ C ++ P LW E
Sbjct: 14 DVSESLLD--KCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV-LWPE 66
>UNIPROTKB|H0Y4T1 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AL513365 HGNC:HGNC:20603
Ensembl:ENST00000416052 Uniprot:H0Y4T1
Length = 162
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-CSLYSPAALWLE 97
D + L+D K ++ +P PDI IR+SGE R S+FLLWQTS+ C ++ P LW E
Sbjct: 59 DISESLLD--KCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV-LWPE 111
>UNIPROTKB|Q5T0A3 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006053
EMBL:AL513365 UniGene:Hs.369385 HGNC:HGNC:20603 HOVERGEN:HBG051350
IPI:IPI01011907 SMR:Q5T0A3 Ensembl:ENST00000430232 Uniprot:Q5T0A3
Length = 216
Score = 117 (46.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-CSLYSPAALWLE 97
D + L+D K ++ +P PDI IR+SGE R S+FLLWQTS+ C ++ P LW E
Sbjct: 143 DISESLLD--KCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV-LWPE 195
>UNIPROTKB|D4A6Z6 [details] [associations]
symbol:Dhdds "Protein Dhdds" species:10116 "Rattus
norvegicus" [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
RGD:1311560 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 IPI:IPI00952082
Ensembl:ENSRNOT00000065740 ArrayExpress:D4A6Z6 Uniprot:D4A6Z6
Length = 299
Score = 120 (47.3 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+Q+ + QA K + D + L+D + ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQKKIAQAV---QATKN-YNNDVSESLLD--QCLYSNHSPQPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSN-CSLYSPAALWLE 97
S+FLLWQTS+ C ++ P LW E
Sbjct: 179 SDFLLWQTSHSCLVFQPV-LWPE 200
>TAIR|locus:505006702 [details] [associations]
symbol:AT5G58784 species:3702 "Arabidopsis thaliana"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0019408 "dolichol
biosynthetic process" evidence=IGI;RCA] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IGI]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005789 GO:GO:0006486 EMBL:AB020755
eggNOG:COG0020 HOGENOM:HOG000006056 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AK220649 IPI:IPI00522830 RefSeq:NP_568884.4
UniGene:At.51437 ProteinModelPortal:Q570Q8 SMR:Q570Q8 STRING:Q570Q8
PRIDE:Q570Q8 EnsemblPlants:AT5G58784.1 GeneID:835994
KEGG:ath:AT5G58784 TAIR:At5g58784 InParanoid:Q570Q8 OMA:ARETSEN
PhylomeDB:Q570Q8 ProtClustDB:CLSN2927464 Genevestigator:Q570Q8
GermOnline:AT5G58784 Uniprot:Q570Q8
Length = 302
Score = 120 (47.3 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 14 SLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDV-----EKHMFMAVA--PDPDIT 66
+LI+ + Y D L ++L K+ +D + ++ D+ EK + + P+PD+
Sbjct: 191 NLIIAIDYSGRY--DILQACKSLANKV-KDGLIQVEDINEKAMEKELLTKCSEFPNPDLL 247
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNF LWQ++ LY P LW
Sbjct: 248 IRTSGEQRISNFFLWQSAYTELYFPTVLW 276
Score = 98 (39.6 bits), Expect = 0.00015, P = 0.00015
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 42 EDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW------ 95
ED +K ++ E + P+PD+ IR+SGE R SNF LWQ++ LY P LW
Sbjct: 223 EDINEKAMEKELLTKCSEFPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFGEA 282
Query: 96 --LE------EKKKR 102
LE ++++R
Sbjct: 283 EYLEALTWYQQRQRR 297
>TIGR_CMR|SPO_1665 [details] [associations]
symbol:SPO_1665 "undecaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000031
GenomeReviews:CP000031_GR HOGENOM:HOG000006056 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF
KO:K00806 GO:GO:0004659 RefSeq:YP_166904.1
ProteinModelPortal:Q5LSV1 GeneID:3194281 KEGG:sil:SPO1665
PATRIC:23376655 ProtClustDB:CLSK933597 Uniprot:Q5LSV1
Length = 243
Score = 117 (46.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ + +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 165 EDVDEETLPRYLDTR------VLPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLW 216
>UNIPROTKB|Q58DN9 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase isoform
a" species:9913 "Bos taurus" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 CTD:79947
HOVERGEN:HBG051350 OMA:IAYSELF GeneTree:ENSGT00390000007879
EMBL:DAAA02006373 EMBL:BT021558 IPI:IPI00694399
RefSeq:NP_001030423.1 UniGene:Bt.87215 STRING:Q58DN9
Ensembl:ENSBTAT00000010328 GeneID:523264 KEGG:bta:523264
NextBio:20873699 Uniprot:Q58DN9
Length = 316
Score = 118 (46.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-CSLYSPAALWLE 97
D + L+D K ++ +P PDI IR+SGE R S+FLLWQTS+ C ++ P LW E
Sbjct: 182 DVSESLLD--KCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV-LWPE 234
>MGI|MGI:1914672 [details] [associations]
symbol:Dhdds "dehydrodolichyl diphosphate synthase"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 MGI:MGI:1914672 GO:GO:0005789 GO:GO:0006486
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006053 CTD:79947 HOVERGEN:HBG051350 OMA:IAYSELF
EMBL:AK034277 EMBL:AK036929 EMBL:AK049991 EMBL:AK135087
EMBL:AK149138 EMBL:AK171207 EMBL:AL837508 EMBL:AL670680
EMBL:BC004011 IPI:IPI00116293 IPI:IPI00227580 RefSeq:NP_080420.2
UniGene:Mm.100290 ProteinModelPortal:Q99KU1 SMR:Q99KU1
STRING:Q99KU1 PhosphoSite:Q99KU1 PRIDE:Q99KU1
Ensembl:ENSMUST00000012262 Ensembl:ENSMUST00000105887
Ensembl:ENSMUST00000144668 GeneID:67422 KEGG:mmu:67422
UCSC:uc008vdv.1 GeneTree:ENSGT00390000007879 InParanoid:A3KGL4
NextBio:324524 Bgee:Q99KU1 CleanEx:MM_DHDDS Genevestigator:Q99KU1
GermOnline:ENSMUSG00000012117 Uniprot:Q99KU1
Length = 333
Score = 118 (46.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-CSLYSPAALWLE 97
D + L+D K ++ +P PDI IR+SGE R S+FLLWQTS+ C ++ P LW E
Sbjct: 182 DVSESLLD--KCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV-LWPE 234
>TAIR|locus:505006701 [details] [associations]
symbol:cPT6 "cis-prenyltransferase 6" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0019408 "dolichol biosynthetic process"
evidence=IGI;RCA] [GO:0045547 "dehydrodolichyl diphosphate synthase
activity" evidence=IGI] InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 UniPathway:UPA00378 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005789 GO:GO:0006486
EMBL:AB020755 eggNOG:COG0020 HOGENOM:HOG000006056 KO:K11778
ProtClustDB:CLSN2688364 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AK117939
EMBL:BT005285 EMBL:AY084601 IPI:IPI00521128 RefSeq:NP_568883.1
UniGene:At.29263 ProteinModelPortal:Q8GY03 SMR:Q8GY03 IntAct:Q8GY03
STRING:Q8GY03 PaxDb:Q8GY03 PRIDE:Q8GY03 EnsemblPlants:AT5G58782.1
GeneID:835993 KEGG:ath:AT5G58782 TAIR:At5g58782 InParanoid:Q8GY03
OMA:GACKNIV PhylomeDB:Q8GY03 Genevestigator:Q8GY03
GermOnline:AT5G58782 Uniprot:Q8GY03
Length = 289
Score = 103 (41.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 41 DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE-EK 99
+ED + L + E P PD+ IR+SGE R SNF LWQ + + LW + +K
Sbjct: 209 EEDVDETLFERELQTRCTEFPSPDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDK 268
Query: 100 KK 101
+K
Sbjct: 269 QK 270
Score = 31 (16.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 10 LKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDT 44
L + SL+L +P ++ K GS K+KID+ T
Sbjct: 9 LSLLSLLL-LPCLRPCFPAK--GSLKNKKKIDKGT 40
>UNIPROTKB|Q86SQ9 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 UniPathway:UPA00378
GO:GO:0005789 EMBL:CH471059 GO:GO:0006486 Orphanet:791
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AB090852
EMBL:GU727641 EMBL:AK023164 EMBL:AK297134 EMBL:AK316485
EMBL:AL513365 EMBL:BC003643 EMBL:BC004117 EMBL:BC034152
IPI:IPI00410097 IPI:IPI00410099 IPI:IPI00514787 IPI:IPI00922374
RefSeq:NP_001230493.1 RefSeq:NP_001230494.1 RefSeq:NP_079163.2
RefSeq:NP_995583.1 UniGene:Hs.369385 ProteinModelPortal:Q86SQ9
SMR:Q86SQ9 STRING:Q86SQ9 PhosphoSite:Q86SQ9 DMDM:116241329
PRIDE:Q86SQ9 DNASU:79947 Ensembl:ENST00000236342
Ensembl:ENST00000360009 Ensembl:ENST00000525682
Ensembl:ENST00000526219 GeneID:79947 KEGG:hsa:79947 UCSC:uc001bmk.3
UCSC:uc001bml.3 UCSC:uc001bmn.3 CTD:79947 GeneCards:GC01P026758
HGNC:HGNC:20603 HPA:HPA026721 HPA:HPA026727 MIM:608172 MIM:613861
neXtProt:NX_Q86SQ9 PharmGKB:PA134867119 HOVERGEN:HBG051350
OMA:IAYSELF GenomeRNAi:79947 NextBio:69906 ArrayExpress:Q86SQ9
Bgee:Q86SQ9 CleanEx:HS_DHDDS Genevestigator:Q86SQ9
GermOnline:ENSG00000117682 Uniprot:Q86SQ9
Length = 333
Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-CSLYSPAALWLE 97
D + L+D K ++ +P PDI IR+SGE R S+FLLWQTS+ C ++ P LW E
Sbjct: 182 DISESLLD--KCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV-LWPE 234
>UNIPROTKB|Q5T0A6 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 HOGENOM:HOG000006053 EMBL:AL513365
UniGene:Hs.369385 HGNC:HGNC:20603 HOVERGEN:HBG051350 SMR:Q5T0A6
Ensembl:ENST00000431933 Uniprot:Q5T0A6
Length = 169
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + QA K + D + L+D K ++ +P PDI IR+SGE R
Sbjct: 31 LLPL-DLQELIAQAV---QATKN-YNNDISESLLD--KCLYTNRSPHPDILIRTSGEVRL 83
Query: 76 SNFLLWQTSNCSLYSPAALWLEEKKKRQ 103
S+FLLWQ +Y+ EE+K++Q
Sbjct: 84 SDFLLWQQKARDMYA------EERKRQQ 105
>UNIPROTKB|O53434 [details] [associations]
symbol:MT1118 "(2Z,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016094 "polyprenol
biosynthetic process" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033850 "Z-farnesyl diphosphate synthase
activity" evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0005829
GO:GO:0005886 EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 GO:GO:0030145 GO:GO:0016094
eggNOG:COG0020 HOGENOM:HOG000006056 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 GO:GO:0033850
KO:K12503 OMA:LYTRGQP ProtClustDB:CLSK790942 PIR:D70895
RefSeq:NP_215602.1 RefSeq:NP_335560.1 RefSeq:YP_006514453.1
PDB:2VFW PDB:2VG0 PDB:2VG1 PDBsum:2VFW PDBsum:2VG0 PDBsum:2VG1
ProteinModelPortal:O53434 SMR:O53434 PRIDE:O53434
EnsemblBacteria:EBMYCT00000001974 EnsemblBacteria:EBMYCT00000072951
GeneID:13319656 GeneID:887097 GeneID:925064 KEGG:mtc:MT1118
KEGG:mtu:Rv1086 KEGG:mtv:RVBD_1086 PATRIC:18124210
TubercuList:Rv1086 BioCyc:MetaCyc:MONOMER-15204
EvolutionaryTrace:O53434 Uniprot:O53434
Length = 262
Score = 113 (44.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 30 LDGSQAL--KEKIDEDTIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+D +AL KE + T ++LVD + ++++ + PDPD+ IR+SGE R S FLLW
Sbjct: 165 VDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLW 224
Query: 82 QTSNCSLYSPAALW 95
Q++ ++ A W
Sbjct: 225 QSAYSEMWFTEAHW 238
>RGD|1311560 [details] [associations]
symbol:Dhdds "dehydrodolichyl diphosphate synthase"
species:10116 "Rattus norvegicus" [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 RGD:1311560 eggNOG:COG0020 KO:K11778
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 CTD:79947
HOVERGEN:HBG051350 GeneTree:ENSGT00390000007879 EMBL:CH473968
OMA:ETLRWCK EMBL:BC085875 IPI:IPI00365261 RefSeq:NP_001011978.1
UniGene:Rn.24616 STRING:Q5U2T2 Ensembl:ENSRNOT00000020051
GeneID:298541 KEGG:rno:298541 UCSC:RGD:1311560 InParanoid:Q5U2T2
OrthoDB:EOG4ZCT4W NextBio:643882 Genevestigator:Q5U2T2
Uniprot:Q5U2T2
Length = 333
Score = 115 (45.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-CSLYSPAALWLE 97
D + L+D + ++ +P PDI IR+SGE R S+FLLWQTS+ C ++ P LW E
Sbjct: 182 DVSESLLD--QCLYSNHSPQPDILIRTSGEVRLSDFLLWQTSHSCLVFQPV-LWPE 234
>FB|FBgn0029980 [details] [associations]
symbol:CG10778 species:7227 "Drosophila melanogaster"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0006911 EMBL:AE014298 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 GeneTree:ENSGT00390000007879 OMA:LYTRGQP
EMBL:AY069247 RefSeq:NP_572425.1 UniGene:Dm.102 HSSP:O82827
SMR:Q9W3M6 IntAct:Q9W3M6 STRING:Q9W3M6 EnsemblMetazoa:FBtr0071131
EnsemblMetazoa:FBtr0331433 GeneID:31708 KEGG:dme:Dmel_CG10778
UCSC:CG10778-RA FlyBase:FBgn0029980 InParanoid:Q9W3M6
OrthoDB:EOG4K0P44 GenomeRNAi:31708 NextBio:774944 Uniprot:Q9W3M6
Length = 300
Score = 112 (44.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
GSQ L ED ++L+ E+ ++ +P PD+ R+SGETR S+F++WQ S LY
Sbjct: 174 GSQDLA---GEDISERLL--EECLYTRHSPPPDLVFRTSGETRLSDFMMWQLSTSVLYFS 228
Query: 92 AALW 95
LW
Sbjct: 229 NVLW 232
>TIGR_CMR|GSU_1917 [details] [associations]
symbol:GSU_1917 "undecaprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR
eggNOG:COG0020 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF
KO:K00806 ProtClustDB:PRK14830 RefSeq:NP_952966.1
ProteinModelPortal:P60482 GeneID:2686735 KEGG:gsu:GSU1917
PATRIC:22026699 BioCyc:GSUL243231:GH27-1968-MONOMER Uniprot:P60482
Length = 246
Score = 109 (43.4 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++F + PDPD IR+SGE R SNFLLWQ + Y + W E
Sbjct: 172 YLFTSGLPDPDFLIRTSGEMRISNFLLWQLAYTEFYFSSVNWPE 215
>TIGR_CMR|DET_0373 [details] [associations]
symbol:DET_0373 "undecaprenyl diphosphate synthase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0020 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006054 KO:K00806 GO:GO:0004659 OMA:FLWRIAY
RefSeq:YP_181119.1 ProteinModelPortal:Q3Z9I0 STRING:Q3Z9I0
GeneID:3230313 KEGG:det:DET0373 PATRIC:21607815
ProtClustDB:CLSK837523 BioCyc:DETH243164:GJNF-373-MONOMER
Uniprot:Q3Z9I0
Length = 236
Score = 108 (43.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+K+ + D I + V + +++ A P+ D+ IR+ GE R SNFLLWQ++ LY +W
Sbjct: 153 VKDGLAADKITENV-FDGYLYTAGIPEADLVIRTGGEMRLSNFLLWQSAYSELYFSEVMW 211
>ZFIN|ZDB-GENE-040426-2236 [details] [associations]
symbol:dhdds "dehydrodolichyl diphosphate
synthase" species:7955 "Danio rerio" [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0016740 "transferase activity"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 ZFIN:ZDB-GENE-040426-2236
GO:GO:0050908 GO:GO:0042462 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 CTD:79947
HOVERGEN:HBG051350 OrthoDB:EOG4ZCT4W EMBL:BC067175 IPI:IPI00492501
RefSeq:NP_998352.1 UniGene:Dr.80056 ProteinModelPortal:Q6NXA2
STRING:Q6NXA2 PRIDE:Q6NXA2 GeneID:406468 KEGG:dre:406468
InParanoid:Q6NXA2 NextBio:20818059 ArrayExpress:Q6NXA2 Bgee:Q6NXA2
Uniprot:Q6NXA2
Length = 335
Score = 110 (43.8 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 55 MFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++ + +P+PD+ IR+SGE R S+FLLWQTS L + LW E
Sbjct: 192 LYSSNSPNPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPE 234
>UNIPROTKB|A0R2W4 [details] [associations]
symbol:uppS "(2Z,6E)-farnesyl diphosphate synthase"
species:246196 "Mycobacterium smegmatis str. MC2 155" [GO:0000287
"magnesium ion binding" evidence=ISS] [GO:0016094 "polyprenol
biosynthetic process" evidence=ISS] [GO:0033850 "Z-farnesyl
diphosphate synthase activity" evidence=IDA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
GO:GO:0005886 GO:GO:0000287 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0016094 eggNOG:COG0020
HOGENOM:HOG000006056 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 GO:GO:0033850
RefSeq:YP_006569857.1 RefSeq:YP_889502.1 ProteinModelPortal:A0R2W4
SMR:A0R2W4 STRING:A0R2W4 EnsemblBacteria:EBMYCT00000044347
GeneID:13425953 GeneID:4532700 KEGG:msg:MSMEI_5118
KEGG:msm:MSMEG_5256 PATRIC:18082797 KO:K12503 OMA:LYTRGQP
ProtClustDB:CLSK790942 BioCyc:MSME246196:GJ4Y-5255-MONOMER
Uniprot:A0R2W4
Length = 263
Score = 108 (43.1 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 49 VD-VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
VD + ++++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W
Sbjct: 192 VDGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYW 239
>UNIPROTKB|P60472 [details] [associations]
symbol:ispU "subunit of undecaprenyl diphosphate synthase"
species:83333 "Escherichia coli K-12" [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=IEA;IMP]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0016094 "polyprenol biosynthetic
process" evidence=IDA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA;IDA] [GO:0043164 "Gram-negative-bacterium-type cell
wall biogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0005737 GO:GO:0051301
GO:GO:0008360 GO:GO:0000287 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0007049
EMBL:U70214 GO:GO:0009252 GO:GO:0016094 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF KO:K00806
GO:GO:0008834 GO:GO:0043164 PIR:F64741 RefSeq:NP_414716.1
RefSeq:YP_488476.1 PDB:1JP3 PDB:1UEH PDB:1V7U PDB:1X06 PDB:1X07
PDB:1X08 PDB:1X09 PDB:2E98 PDB:2E99 PDB:2E9A PDB:2E9C PDB:2E9D
PDB:3QAS PDB:3SGV PDB:3SGX PDB:3SH0 PDB:3TH8 PDB:4H2J PDB:4H2M
PDB:4H2O PDB:4H38 PDB:4H3A PDB:4H3C PDBsum:1JP3 PDBsum:1UEH
PDBsum:1V7U PDBsum:1X06 PDBsum:1X07 PDBsum:1X08 PDBsum:1X09
PDBsum:2E98 PDBsum:2E99 PDBsum:2E9A PDBsum:2E9C PDBsum:2E9D
PDBsum:3QAS PDBsum:3SGV PDBsum:3SGX PDBsum:3SH0 PDBsum:3TH8
PDBsum:4H2J PDBsum:4H2M PDBsum:4H2O PDBsum:4H38 PDBsum:4H3A
PDBsum:4H3C DisProt:DP00516 ProteinModelPortal:P60472 SMR:P60472
DIP:DIP-48251N IntAct:P60472 PRIDE:P60472
EnsemblBacteria:EBESCT00000004356 EnsemblBacteria:EBESCT00000014776
GeneID:12931773 GeneID:944874 KEGG:ecj:Y75_p0170 KEGG:eco:b0174
PATRIC:32115457 EchoBASE:EB3113 EcoGene:EG13329
ProtClustDB:PRK10240 BioCyc:EcoCyc:UPPSYN-MONOMER
BioCyc:ECOL316407:JW0169-MONOMER BioCyc:MetaCyc:UPPSYN-MONOMER
EvolutionaryTrace:P60472 Genevestigator:P60472 Uniprot:P60472
Length = 253
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 28 DKLDGSQALKEKIDEDTIKK-LVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D + G + L EK+ + ++ +D E +H+ M D+ IR+ GE R SNFLLWQ
Sbjct: 150 DIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQI 209
Query: 84 SNCSLYSPAALW 95
+ LY LW
Sbjct: 210 AYAELYFTDVLW 221
>TAIR|locus:2046857 [details] [associations]
symbol:AT2G23400 species:3702 "Arabidopsis thaliana"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0019408 "dolichol
biosynthetic process" evidence=IGI;RCA] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IGI]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 EMBL:CP002685 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 IPI:IPI00544170 RefSeq:NP_179921.2
UniGene:At.52878 ProteinModelPortal:F4IMI8 SMR:F4IMI8
EnsemblPlants:AT2G23400.1 GeneID:816872 KEGG:ath:AT2G23400
OMA:FACSHEN ArrayExpress:F4IMI8 Uniprot:F4IMI8
Length = 253
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 41 DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL-YSPAALWLE-E 98
+ED + L++ E + P PD+ IR+SGE R SNF LWQ + L YSP LW + +
Sbjct: 173 EEDVDEALIERELLTNCSDFPSPDLMIRTSGEQRISNFFLWQLAYTELFYSPV-LWPDFD 231
Query: 99 KKK 101
K K
Sbjct: 232 KDK 234
>UNIPROTKB|A0R0S4 [details] [associations]
symbol:uppS "Decaprenyl diphosphate synthase"
species:246196 "Mycobacterium smegmatis str. MC2 155" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IDA]
[GO:0033850 "Z-farnesyl diphosphate synthase activity"
evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0005886 GO:GO:0046872
EMBL:CP000480 EMBL:CP001663 GenomeReviews:CP000480_GR
eggNOG:COG0020 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006055 OMA:ETLRWCK
RefSeq:YP_006569128.1 RefSeq:YP_888762.1 ProteinModelPortal:A0R0S4
SMR:A0R0S4 STRING:A0R0S4 EnsemblBacteria:EBMYCT00000044980
GeneID:13430895 GeneID:4535408 KEGG:msg:MSMEI_4379
KEGG:msm:MSMEG_4490 PATRIC:18081315 KO:K14215 ProtClustDB:PRK14827
BioCyc:MSME246196:GJ4Y-4489-MONOMER GO:GO:0008834 GO:GO:0033850
Uniprot:A0R0S4
Length = 293
Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
+A+ KI+ I + + KH+ A PD D+ IR+SGE R SNFLLWQ +
Sbjct: 208 EAVDGKINPARISEAM-FAKHLHRADIPDVDLFIRTSGEQRASNFLLWQAAYAEYVFQDK 266
Query: 94 LW 95
LW
Sbjct: 267 LW 268
>TAIR|locus:2178823 [details] [associations]
symbol:cPT4 "cis-prenyltransferase 4" species:3702
"Arabidopsis thaliana" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0019408 "dolichol biosynthetic process"
evidence=IGI] [GO:0045547 "dehydrodolichyl diphosphate synthase
activity" evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=RCA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0006486 EMBL:AB020755 eggNOG:COG0020 KO:K11778
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:AK221512 IPI:IPI00544521 IPI:IPI00651111
RefSeq:NP_200685.1 UniGene:At.50538 ProteinModelPortal:Q56Y11
SMR:Q56Y11 STRING:Q56Y11 PaxDb:Q56Y11 PRIDE:Q56Y11
EnsemblPlants:AT5G58770.1 GeneID:835991 KEGG:ath:AT5G58770
TAIR:At5g58770 HOGENOM:HOG000006054 InParanoid:Q56Y11 OMA:WATRRFL
PhylomeDB:Q56Y11 ProtClustDB:CLSN2914842 Genevestigator:Q56Y11
GermOnline:AT5G58770 Uniprot:Q56Y11
Length = 310
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE +L++ E P PD+ IR+SGE R SNFLLWQ + L+ LW
Sbjct: 230 EEIDE----RLIEEELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFAQELW 283
>TAIR|locus:2178838 [details] [associations]
symbol:cPT5 "cis -prenyltransferase 5" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0019408 "dolichol biosynthetic process"
evidence=IGI;RCA] [GO:0045547 "dehydrodolichyl diphosphate synthase
activity" evidence=IGI] [GO:0002094 "polyprenyltransferase
activity" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0009409 "response to cold" evidence=IEP]
[GO:0050267 "rubber cis-polyprenylcistransferase activity"
evidence=IGI] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 UniPathway:UPA00378 GO:GO:0005783 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009409 GO:GO:0006486 EMBL:AB020755
eggNOG:COG0020 HOGENOM:HOG000006056 KO:K11778
ProtClustDB:CLSN2688364 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 EMBL:AY090344 EMBL:BT004518
IPI:IPI00538944 RefSeq:NP_568882.1 UniGene:At.29264
ProteinModelPortal:Q8RX73 SMR:Q8RX73 STRING:Q8RX73
EnsemblPlants:AT5G58780.1 GeneID:835992 KEGG:ath:AT5G58780
TAIR:At5g58780 InParanoid:Q8RX73 OMA:RTICDIE PhylomeDB:Q8RX73
Genevestigator:Q8RX73 GermOnline:AT5G58780 GO:GO:0050267
Uniprot:Q8RX73
Length = 302
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 21 DVQEYCEDKLDGSQALKEKI-DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
D+ C+ + S+ K I +ED + L++ E P PD+ IR+SGE R SNF
Sbjct: 203 DILRACKSIVKKSE--KGLIREEDVDEALIERELLTNCTEFPSPDLLIRTSGEQRISNFF 260
Query: 80 LWQTSNCSLYSPAALWLE-EKKK 101
LWQ + L+ LW + +K K
Sbjct: 261 LWQLAYTELFFSPVLWPDFDKDK 283
>TIGR_CMR|CHY_1781 [details] [associations]
symbol:CHY_1781 "undecaprenyl diphosphate synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0000287 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0020 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:IAYSELF
HOGENOM:HOG000006055 KO:K00806 GO:GO:0004659 RefSeq:YP_360601.1
ProteinModelPortal:Q3AB83 STRING:Q3AB83 GeneID:3728460
KEGG:chy:CHY_1781 PATRIC:21276673
BioCyc:CHYD246194:GJCN-1780-MONOMER Uniprot:Q3AB83
Length = 255
Score = 105 (42.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
K+ + I + V +++ PDPD+ IR SGE R SNFLLWQ + ++ LW
Sbjct: 172 KLSPEQIDEKV-FANYLYTKEFPDPDLLIRPSGEIRISNFLLWQIAYSEIWLTDVLW 227
>TAIR|locus:2046867 [details] [associations]
symbol:CPT "cis-prenyltransferase" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IEA] [GO:0019408
"dolichol biosynthetic process" evidence=IGI;RCA] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IGI]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 EMBL:AC003040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0006486 EMBL:AF162441
EMBL:AJ277136 IPI:IPI00523947 PIR:T01130 PIR:T52648
RefSeq:NP_565551.1 UniGene:At.10003 ProteinModelPortal:O80458
SMR:O80458 STRING:O80458 PRIDE:O80458 EnsemblPlants:AT2G23410.1
GeneID:816873 KEGG:ath:AT2G23410 GeneFarm:5073 TAIR:At2g23410
eggNOG:COG0020 HOGENOM:HOG000006056 InParanoid:O80458 KO:K11778
OMA:FTERMWP PhylomeDB:O80458 ProtClustDB:CLSN2688364
Genevestigator:O80458 GermOnline:AT2G23410 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 Uniprot:O80458
Length = 303
Score = 106 (42.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 21 DVQEYCEDKLDGSQALKEKI-DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
D+ C+ + S+ K I +ED + L++ E + P PD+ IR+SGE R SNF
Sbjct: 204 DIMHACKSLVKKSE--KGLIREEDVDEALIERELLTNCSDFPSPDLMIRTSGEQRISNFF 261
Query: 80 LWQTSNCSLYSPAALWLE-EKKK 101
LWQ + L+ W + +K K
Sbjct: 262 LWQLAYSELFFSPVFWPDFDKDK 284
>TIGR_CMR|CPS_1557 [details] [associations]
symbol:CPS_1557 "undecaprenyl diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0008360 GO:GO:0000287 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0009252 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 KO:K00806 GO:GO:0008834
OMA:FLWRIAY RefSeq:YP_268299.1 ProteinModelPortal:Q485G6 SMR:Q485G6
STRING:Q485G6 GeneID:3519873 KEGG:cps:CPS_1557 PATRIC:21466321
BioCyc:CPSY167879:GI48-1638-MONOMER Uniprot:Q485G6
Length = 254
Score = 103 (41.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 23 QEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
++ D G+ +L + I+E+T+ + H +A P D+ IR+ G+ R SNFLLWQ
Sbjct: 155 KKLASDVKQGTMSLDD-INEETLNE------HTCLANLPTLDLLIRTGGDYRISNFLLWQ 207
Query: 83 TSNCSLYSPAALW 95
+ LY LW
Sbjct: 208 AAYAELYFTDTLW 220
>UNIPROTKB|Q97SR4 [details] [associations]
symbol:uppS "Isoprenyl transferase" species:170187
"Streptococcus pneumoniae TIGR4" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0046872 EMBL:AE005672
GenomeReviews:AE005672_GR eggNOG:COG0020 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 OMA:IAYSELF HOGENOM:HOG000006055 KO:K00806
ProtClustDB:PRK14830 PIR:F95030 RefSeq:NP_344799.1
ProteinModelPortal:Q97SR4 IntAct:Q97SR4
EnsemblBacteria:EBSTRT00000025342 GeneID:930065 KEGG:spn:SP_0261
PATRIC:19704855 ChEMBL:CHEMBL1075025 Uniprot:Q97SR4
Length = 252
Score = 101 (40.6 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 27/71 (38%), Positives = 36/71 (50%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETRPSNFLLWQTS 84
KL L KI+ I + + + ++F P DPD+ IR+SGE R SNFL WQ +
Sbjct: 158 KLISQDVLDAKINPGDITEEL-IGNYLFTQHLPKDLRDPDLIIRTSGELRLSNFLPWQGA 216
Query: 85 NCSLYSPAALW 95
LY LW
Sbjct: 217 YSELYFTDTLW 227
>GENEDB_PFALCIPARUM|MAL8P1.22 [details] [associations]
symbol:MAL8P1.22 "dehydrodolichyl diphosphate
synthetase, putative" species:5833 "Plasmodium falciparum"
[GO:0004659 "prenyltransferase activity" evidence=ISS] [GO:0019408
"dolichol biosynthetic process" evidence=ISS] InterPro:IPR001441
Pfam:PF01255 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 GO:GO:0019408 GO:GO:0004659 GO:GO:0008834
EMBL:AL844507 RefSeq:XP_001349261.2 ProteinModelPortal:Q8IB97
EnsemblProtists:MAL8P1.22:mRNA GeneID:2655228 KEGG:pfa:MAL8P1.22
EuPathDB:PlasmoDB:PF3D7_0826400 HOGENOM:HOG000282595
ProtClustDB:PTZ00349 Uniprot:Q8IB97
Length = 317
Score = 101 (40.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 17 LPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETR 74
L PD + E K DG +EK+ +E+ ++ +V+ + + P P+I IR+SGE R
Sbjct: 204 LKYPDHENENELKFDGKCLCREKVKYNEEQLE-IVNYHNKLLTSDLPPPNILIRTSGEQR 262
Query: 75 PSNFLLWQTSNCS-LYSPAALW 95
S+F+L+Q S + +Y W
Sbjct: 263 LSDFMLYQISEFTEIYFINEYW 284
>UNIPROTKB|Q8IB97 [details] [associations]
symbol:MAL8P1.22 "Dehydrodolichyl diphosphate synthetase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0019408 "dolichol
biosynthetic process" evidence=ISS] InterPro:IPR001441 Pfam:PF01255
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 GO:GO:0019408 GO:GO:0004659 GO:GO:0008834
EMBL:AL844507 RefSeq:XP_001349261.2 ProteinModelPortal:Q8IB97
EnsemblProtists:MAL8P1.22:mRNA GeneID:2655228 KEGG:pfa:MAL8P1.22
EuPathDB:PlasmoDB:PF3D7_0826400 HOGENOM:HOG000282595
ProtClustDB:PTZ00349 Uniprot:Q8IB97
Length = 317
Score = 101 (40.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 17 LPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETR 74
L PD + E K DG +EK+ +E+ ++ +V+ + + P P+I IR+SGE R
Sbjct: 204 LKYPDHENENELKFDGKCLCREKVKYNEEQLE-IVNYHNKLLTSDLPPPNILIRTSGEQR 262
Query: 75 PSNFLLWQTSNCS-LYSPAALW 95
S+F+L+Q S + +Y W
Sbjct: 263 LSDFMLYQISEFTEIYFINEYW 284
>TIGR_CMR|BA_3961 [details] [associations]
symbol:BA_3961 "undecaprenyl diphosphate synthase"
species:198094 "Bacillus anthracis str. Ames" [GO:0009252
"peptidoglycan biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] HAMAP:MF_01139 InterPro:IPR001441
InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR eggNOG:COG0020
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 OMA:IAYSELF KO:K00806
RefSeq:NP_846204.1 RefSeq:YP_020600.2 RefSeq:YP_029925.1
ProteinModelPortal:Q81WL2 SMR:Q81WL2 DNASU:1086839
EnsemblBacteria:EBBACT00000010705 EnsemblBacteria:EBBACT00000014419
EnsemblBacteria:EBBACT00000024485 GeneID:1086839 GeneID:2819577
GeneID:2849350 KEGG:ban:BA_3961 KEGG:bar:GBAA_3961 KEGG:bat:BAS3674
ProtClustDB:PRK14830 BioCyc:BANT260799:GJAJ-3732-MONOMER
BioCyc:BANT261594:GJ7F-3849-MONOMER Uniprot:Q81WL2
Length = 258
Score = 99 (39.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ +D +G K ++ ED ++++ ++ + PDP++ IR+SGE R SNF
Sbjct: 164 VSAVQHMMKDSEEG----KVRV-EDVSEEMLS--SYLMTSSLPDPELLIRTSGELRISNF 216
Query: 79 LLWQTSNCSLYSPAALW 95
+LWQ + + W
Sbjct: 217 MLWQIAYSEFWFTDVYW 233
>UNIPROTKB|Q47RM6 [details] [associations]
symbol:Tfu_0853 "Trans,polycis-polyprenyl diphosphate
synthase ((2Z,6E)-farnesyl diphosphate specific)" species:269800
"Thermobifida fusca YX" [GO:0004659 "prenyltransferase activity"
evidence=IDA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 GO:GO:0046872 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 EMBL:CP000088 RefSeq:YP_288914.1
ProteinModelPortal:Q47RM6 SMR:Q47RM6 STRING:Q47RM6 GeneID:3579635
GenomeReviews:CP000088_GR KEGG:tfu:Tfu_0853 PATRIC:23902172
HOGENOM:HOG000006055 KO:K00806 OMA:ETLRWCK ProtClustDB:CLSK2769046
BioCyc:MetaCyc:MONOMER-15682 GO:GO:0004659 Uniprot:Q47RM6
Length = 282
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
++++ PD D+ IRSSGE R SNFLLWQ+S LW + +R F
Sbjct: 197 RYLYHPDIPDVDLFIRSSGEQRLSNFLLWQSSYAEFVFLDTLW-PDFDRRHF 247
>TIGR_CMR|SO_1633 [details] [associations]
symbol:SO_1633 "undecaprenyl diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
[GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0008360 GO:GO:0046872 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009252 eggNOG:COG0020
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006054 KO:K00806 OMA:ETLRWCK
GO:GO:0008834 RefSeq:NP_717244.1 ProteinModelPortal:Q8EGH1
SMR:Q8EGH1 GeneID:1169427 KEGG:son:SO_1633 PATRIC:23522900
ProtClustDB:CLSK2516782 Uniprot:Q8EGH1
Length = 275
Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 28 DKLDGSQALKEKID--EDTIKKLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +Q L EK++ E T + + + +H+ M + D+ IR+ G+ R SNF+LWQ
Sbjct: 169 DILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSEVDLIIRTGGDYRISNFVLWQA 228
Query: 84 SNCSLYSPAALW 95
+ L LW
Sbjct: 229 AYAELVFLDTLW 240
>UNIPROTKB|Q5T0A2 [details] [associations]
symbol:DHDDS "Dehydrodolichyl diphosphate synthase"
species:9606 "Homo sapiens" [GO:0016765 "transferase activity,
transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 HOGENOM:HOG000006053
EMBL:AL513365 UniGene:Hs.369385 HGNC:HGNC:20603 HOVERGEN:HBG051350
IPI:IPI00647181 SMR:Q5T0A2 Ensembl:ENST00000436153 Uniprot:Q5T0A2
Length = 222
Score = 94 (38.1 bits), Expect = 0.00023, P = 0.00023
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
L + +D + L+D K ++ +P PDI IR+SGE R S+FLLWQ
Sbjct: 178 LDPRYPDDISESLLD--KCLYTNRSPHPDILIRTSGEVRLSDFLLWQ 222
>CGD|CAL0004730 [details] [associations]
symbol:orf19.4028 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0045547 "dehydrodolichyl
diphosphate synthase activity" evidence=IEA] [GO:0006486 "protein
glycosylation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0019408 "dolichol
biosynthetic process" evidence=IEA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
CGD:CAL0004730 EMBL:AACQ01000012 eggNOG:COG0020 KO:K11778
GO:GO:0016765 Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 HOGENOM:HOG000006053 EMBL:AACQ01000011
RefSeq:XP_721936.1 RefSeq:XP_722097.1 ProteinModelPortal:Q5AJZ3
STRING:Q5AJZ3 GeneID:3636267 GeneID:3636399 KEGG:cal:CaO19.11511
KEGG:cal:CaO19.4028 Uniprot:Q5AJZ3
Length = 328
Score = 95 (38.5 bits), Expect = 0.00038, P = 0.00038
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 33 SQALKEKIDEDTIKKLVDV-----EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN-- 85
+ ++K +DE T K +D+ ++H++ P D+ +R+SG R S+FLLWQT +
Sbjct: 169 THSIKSVVDEAT-KGGIDITEEAIDRHLYTKDVPPLDLLVRTSGTFRLSDFLLWQTVSPE 227
Query: 86 CSLYSPAALW 95
C++ LW
Sbjct: 228 CAVVFVDKLW 237
>UNIPROTKB|P60479 [details] [associations]
symbol:uppS "Decaprenyl diphosphate synthase" species:1773
"Mycobacterium tuberculosis" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IDA]
[GO:0016094 "polyprenol biosynthetic process" evidence=IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0033850
"Z-farnesyl diphosphate synthase activity" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IDA]
HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255
PROSITE:PS01066 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0000287 GO:GO:0030145 EMBL:BX842579 GO:GO:0016094
eggNOG:COG0020 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 GO:GO:0050347
HOGENOM:HOG000006055 OMA:ETLRWCK KO:K14215 ProtClustDB:PRK14827
GO:GO:0008834 GO:GO:0033850 PIR:H70585 RefSeq:NP_216877.1
RefSeq:NP_336910.1 RefSeq:YP_006515795.1 PDB:2VG2 PDB:2VG3 PDB:2VG4
PDBsum:2VG2 PDBsum:2VG3 PDBsum:2VG4 ProteinModelPortal:P60479
SMR:P60479 PRIDE:P60479 EnsemblBacteria:EBMYCT00000003474
EnsemblBacteria:EBMYCT00000071422 GeneID:13319067 GeneID:888964
GeneID:925908 KEGG:mtc:MT2430 KEGG:mtu:Rv2361c KEGG:mtv:RVBD_2361c
PATRIC:18127094 TubercuList:Rv2361c BioCyc:MetaCyc:MONOMER-15221
EvolutionaryTrace:P60479 Uniprot:P60479
Length = 296
Score = 94 (38.1 bits), Expect = 0.00041, P = 0.00041
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+I E TI + H+ PD D+ +R+SGE R SNF+LWQ + LW
Sbjct: 220 ERITESTIAR------HLQRPDIPDVDLFLRTSGEQRSSNFMLWQAAYAEYIFQDKLW 271
>DICTYBASE|DDB_G0291436 [details] [associations]
symbol:DDB_G0291436 "Dehydrodolichyl diphosphate
synthetase" species:44689 "Dictyostelium discoideum" [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] HAMAP:MF_01139 InterPro:IPR001441 InterPro:IPR018520
Pfam:PF01255 PROSITE:PS01066 dictyBase:DDB_G0291436
EMBL:AAFI02000177 eggNOG:COG0020 KO:K11778 GO:GO:0016765
Gene3D:3.40.1180.10 PANTHER:PTHR10291 SUPFAM:SSF64005
TIGRFAMs:TIGR00055 RefSeq:XP_635207.1 ProteinModelPortal:Q54EN3
STRING:Q54EN3 EnsemblProtists:DDB0183890 GeneID:8628152
KEGG:ddi:DDB_G0291436 InParanoid:Q54EN3 Uniprot:Q54EN3
Length = 420
Score = 96 (38.9 bits), Expect = 0.00043, P = 0.00043
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 27 EDKLDGSQALKEKIDEDTIKKLVDVEKHMF---MAVAPDPDITIRSSGETRPSNFLLWQT 83
E+ L + L + ++++ ++ D+++ +F + + D DI IR+SGE R S+F+LWQ+
Sbjct: 258 EEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQS 317
Query: 84 SNCSLYSPAALW 95
+L LW
Sbjct: 318 CFTNLALVNTLW 329
>SGD|S000000206 [details] [associations]
symbol:RER2 "Cis-prenyltransferase involved in dolichol
synthesis" species:4932 "Saccharomyces cerevisiae" [GO:0006486
"protein glycosylation" evidence=IEA;IDA;IMP] [GO:0005783
"endoplasmic reticulum" evidence=IEA;IDA] [GO:0004659
"prenyltransferase activity" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0045547
"dehydrodolichyl diphosphate synthase activity" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019408 "dolichol biosynthetic process" evidence=IDA]
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
UniPathway:UPA00378 SGD:S000000206 GO:GO:0005783 GO:GO:0005789
GO:GO:0006486 EMBL:BK006936 GO:GO:0006888 EMBL:Z26494
eggNOG:COG0020 KO:K11778 Gene3D:3.40.1180.10 PANTHER:PTHR10291
SUPFAM:SSF64005 TIGRFAMs:TIGR00055 OMA:WATRRFL HOGENOM:HOG000006053
GO:GO:0019408 GeneTree:ENSGT00390000007879 EMBL:AB013497
EMBL:Z35871 PIR:S44561 RefSeq:NP_009556.1 ProteinModelPortal:P35196
SMR:P35196 IntAct:P35196 MINT:MINT-4476587 STRING:P35196
PaxDb:P35196 EnsemblFungi:YBR002C GeneID:852287 KEGG:sce:YBR002C
CYGD:YBR002c OrthoDB:EOG4XWK72 BioCyc:MetaCyc:MONOMER-14490
NextBio:970925 Genevestigator:P35196 GermOnline:YBR002C
GO:GO:0045547 Uniprot:P35196
Length = 286
Score = 93 (37.8 bits), Expect = 0.00049, P = 0.00049
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 35 ALKEKIDEDTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
A+KE I + +D +E H++ A P D+ IR+SG +R S+FL+WQ S+
Sbjct: 171 AMKETIVQHKKGAAIDESTLESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASS 224
>WB|WBGene00044025 [details] [associations]
symbol:T01G1.4 species:6239 "Caenorhabditis elegans"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] HAMAP:MF_01139
InterPro:IPR001441 InterPro:IPR018520 Pfam:PF01255 PROSITE:PS01066
eggNOG:COG0020 KO:K11778 GO:GO:0016765 Gene3D:3.40.1180.10
PANTHER:PTHR10291 SUPFAM:SSF64005 TIGRFAMs:TIGR00055
HOGENOM:HOG000006053 GeneTree:ENSGT00390000007879 OMA:LYTRGQP
EMBL:Z92811 RefSeq:NP_001023351.1 ProteinModelPortal:Q5FC21
SMR:Q5FC21 STRING:Q5FC21 EnsemblMetazoa:T01G1.4.1
EnsemblMetazoa:T01G1.4.2 GeneID:266904 KEGG:cel:CELE_T01G1.4
UCSC:T01G1.4 CTD:266904 WormBase:T01G1.4 InParanoid:Q5FC21
NextBio:953384 Uniprot:Q5FC21
Length = 299
Score = 93 (37.8 bits), Expect = 0.00053, P = 0.00053
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 63 PDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
PD+ IR+SGE R S+FL+WQ S +Y LW E
Sbjct: 213 PDLFIRTSGEHRLSDFLMWQASETHVYFDDVLWPE 247
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 104 104 0.00091 102 3 11 23 0.46 30
29 0.50 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 577 (61 KB)
Total size of DFA: 128 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.65u 0.12s 13.77t Elapsed: 00:00:00
Total cpu time: 13.65u 0.12s 13.77t Elapsed: 00:00:00
Start: Fri May 10 23:21:34 2013 End: Fri May 10 23:21:34 2013