BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039384
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561403|ref|XP_002521712.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223539103|gb|EEF40699.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 381
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 15/100 (15%)
Query: 13 NSLILPVPDVQEYCEDKLDGSQALKEKIDED---------------TIKKLVDVEKHMFM 57
N + + VP Q CE+K D Q L + E+ ++ KLVD+E++M+M
Sbjct: 231 NKISMAVPAAQGLCENKWDKDQTLTKNKTENGVLPSEESEKMQGACSLIKLVDIERNMYM 290
Query: 58 AVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
AVAP+PDI IRSSGETR SNFLLWQ S+C LYSP ALW E
Sbjct: 291 AVAPEPDILIRSSGETRLSNFLLWQASDCMLYSPDALWPE 330
>gi|224084084|ref|XP_002307209.1| predicted protein [Populus trichocarpa]
gi|222856658|gb|EEE94205.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 26 CEDKLDGSQALKEKIDED-TIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
C S ++EK+ D +I K+VD+E HM+M+VAP+PDI IRSSGETR SNFLLWQTS
Sbjct: 188 CNSHKSFSGRVEEKLLVDLSILKVVDIESHMYMSVAPNPDIVIRSSGETRLSNFLLWQTS 247
Query: 85 NCSLYSPAALW 95
NC LYSP ALW
Sbjct: 248 NCLLYSPNALW 258
>gi|356529679|ref|XP_003533416.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Glycine
max]
Length = 308
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 20/99 (20%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
C + + ++ K K + + KLVD+EKHM+MAVAPDPDI IR+SGE R SNFLLWQTS
Sbjct: 210 CNELFEMTEERKYKQGDVPLIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTST 269
Query: 86 CSLYSPAALWLE--------------------EKKKRQF 104
C LY+P ALW E EKKK+QF
Sbjct: 270 CPLYAPTALWPEIGLRHLVWAVLNFQRHHFYLEKKKKQF 308
>gi|356561076|ref|XP_003548811.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Glycine
max]
Length = 360
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 20/99 (20%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
C + ++ ++ K + + KLVD+EKHM+MAVAPDPDI IR+SGE R SNFLLWQTS
Sbjct: 262 CNELVEMTEERKYNQGDVPLIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTST 321
Query: 86 CSLYSPAALWLE--------------------EKKKRQF 104
C LY+P ALW E EKK++QF
Sbjct: 322 CPLYAPTALWPEIGLRHLVWAVLNFQRHHFYLEKKRKQF 360
>gi|357443329|ref|XP_003591942.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
gi|355480990|gb|AES62193.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
Length = 426
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/99 (48%), Positives = 58/99 (58%), Gaps = 20/99 (20%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
C ++ ++ K K + KLVD+EKHM+MAVAPDPDI IR+SGE R SNFLLWQTS
Sbjct: 328 CNGTVEITEERKYKQHQIASIKLVDIEKHMYMAVAPDPDILIRTSGEARLSNFLLWQTSA 387
Query: 86 CSLYSPAALWLE--------------------EKKKRQF 104
C LY+P LW E EKKK+QF
Sbjct: 388 CPLYAPKVLWPEIGLRHLVWAVLNFQRHHFYLEKKKKQF 426
>gi|357517675|ref|XP_003629126.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
gi|355523148|gb|AET03602.1| Undecaprenyl pyrophosphate synthetase [Medicago truncatula]
Length = 360
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
C ++ ++ K K E KLVD+EKHM+M VAPDPDI IR+SGE R SNFLLWQTS
Sbjct: 262 CNGIVEITEEQKYKQGEIASIKLVDIEKHMYMTVAPDPDILIRTSGEARLSNFLLWQTSA 321
Query: 86 CSLYSPAALWLE--------------------EKKKRQF 104
C LY+P LW E EKKK+QF
Sbjct: 322 CPLYAPKVLWPEIGLRHLVWAVLNFQRHHFYLEKKKKQF 360
>gi|255582903|ref|XP_002532223.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528080|gb|EEF30154.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 370
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWL 96
+EK+ ++I K VD++KHM+MAVAPDPDI IR++GETR SNFLLWQ +C LYSP LW
Sbjct: 283 REKMQSNSIIKQVDLQKHMYMAVAPDPDILIRTAGETRLSNFLLWQAGDCPLYSPDVLWP 342
Query: 97 E 97
E
Sbjct: 343 E 343
>gi|255582899|ref|XP_002532221.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528078|gb|EEF30152.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 331
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 47/61 (77%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWL 96
+ K+ +I K VDVEK M+MAVAPDPDI IR+SGETR SNFLLWQ SNC LYSP LW
Sbjct: 244 RAKMQSHSIIKQVDVEKPMYMAVAPDPDILIRTSGETRLSNFLLWQASNCPLYSPDVLWP 303
Query: 97 E 97
E
Sbjct: 304 E 304
>gi|414091091|gb|AFW98427.1| cis-prenyltransferase 3 [Solanum lycopersicum]
Length = 290
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 14/91 (15%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKL--------------VDVEKHMFMAVAPDPD 64
V VQE CE+K D + L D + +L +V++HM+M+V PDPD
Sbjct: 171 VHAVQESCEEKWDEIRKLDVNNDGSNLIRLEENVKDKNEHRIGVTNVDRHMYMSVCPDPD 230
Query: 65 ITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I IR+SG TR SNFLLWQ+S+C LYSPAALW
Sbjct: 231 IIIRTSGATRLSNFLLWQSSHCLLYSPAALW 261
>gi|255582905|ref|XP_002532224.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
gi|223528081|gb|EEF30155.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
Length = 363
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 46/59 (77%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+EK+ +I K VD+EKHM MAVAPDPDI IR+SGETR SNFLLWQ +C YSP ALW
Sbjct: 276 REKMQSHSIIKQVDLEKHMPMAVAPDPDILIRTSGETRLSNFLLWQAGDCQGYSPDALW 334
>gi|225437860|ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like isoform 1
[Vitis vinifera]
gi|359480265|ref|XP_003632424.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like isoform 2
[Vitis vinifera]
Length = 290
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
KL+G EK + + L D+EKH++MAVAPDPDI IR+SGETR SNFLLWQ+ C L
Sbjct: 199 KLEGY----EKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCYL 254
Query: 89 YSPAALW 95
YSP+ LW
Sbjct: 255 YSPSVLW 261
>gi|147774323|emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]
Length = 384
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 4/69 (5%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
KL+G EK + + L D+EKH++MAVAPDPDI IR+SGETR SNFLLWQ+ C L
Sbjct: 293 KLEGY----EKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCYL 348
Query: 89 YSPAALWLE 97
YSP+ LW E
Sbjct: 349 YSPSVLWPE 357
>gi|449526796|ref|XP_004170399.1| PREDICTED: LOW QUALITY PROTEIN: dehydrodolichyl diphosphate
synthase 6-like [Cucumis sativus]
Length = 293
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 12/89 (13%)
Query: 19 VPDVQEYCEDKLD------------GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDIT 66
V V+ CE+K + G L + D L DVEKHM+ A PDPDI
Sbjct: 176 VHAVERSCEEKWNEMNSKTANGVGYGFGKLGVANNGDNSITLADVEKHMYTAATPDPDIL 235
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNFLLWQTS+C LYSP+ALW
Sbjct: 236 IRTSGEARLSNFLLWQTSSCYLYSPSALW 264
>gi|23491567|dbj|BAC16756.1| cis-prenyltransferase [Periploca sepium]
Length = 331
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 14/90 (15%)
Query: 22 VQEYCEDK------LDGSQA--------LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITI 67
VQE CE K LD S A E+ + I + D+EKHM+ AV PDPDI I
Sbjct: 172 VQECCERKWDEIRELDSSGAGYGLISIGTNEESKGENIVGVADIEKHMYAAVVPDPDIII 231
Query: 68 RSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
R+SGETR SNFLLWQ+++ LYSP+ LW E
Sbjct: 232 RTSGETRLSNFLLWQSADSLLYSPSILWPE 261
>gi|297832372|ref|XP_002884068.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329908|gb|EFH60327.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 296
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 47 KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+LVD+E++M M+VAPDPDI +RSSGETR SNFLLWQT N L+SPAALW
Sbjct: 219 QLVDIEENMRMSVAPDPDILVRSSGETRLSNFLLWQTGNTQLFSPAALW 267
>gi|296084797|emb|CBI25938.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 12/89 (13%)
Query: 19 VPDVQEYCEDKLDGSQALK----------EKIDEDTIKKLVDVEKHMFMAVAPDPDITIR 68
V VQE C+DK +Q L ++I + +I KLVD+EKHM+M APDPDI IR
Sbjct: 129 VHSVQESCKDKWGETQVLNPSKGCNVGGDDEIQDYSIIKLVDLEKHMYMRFAPDPDILIR 188
Query: 69 SSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+SG SNFLLWQ + C LY P ALW E
Sbjct: 189 TSGCL--SNFLLWQATTCLLYCPTALWPE 215
>gi|297744131|emb|CBI37101.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E C K D +I E + +EKH++MAVAPDPDI IR+SGETR SNFLLW
Sbjct: 174 VEESCVKKWD-------EIRELKASGVDYIEKHLYMAVAPDPDILIRTSGETRLSNFLLW 226
Query: 82 QTSNCSLYSPAALW 95
Q+ C LYSP+ LW
Sbjct: 227 QSQYCYLYSPSVLW 240
>gi|359497722|ref|XP_003635620.1| PREDICTED: LOW QUALITY PROTEIN: dehydrodolichyl diphosphate
synthase 6-like [Vitis vinifera]
Length = 271
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQE C+DK + ++I + +I KLVD+EKHM+M APDPDI IR+SG SNF
Sbjct: 170 VHSVQESCKDKWEVGG--DDEIQDYSIIKLVDLEKHMYMRFAPDPDILIRTSGCL--SNF 225
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + C LY P ALW
Sbjct: 226 LLWQATTCLLYCPTALW 242
>gi|408368307|gb|AFU61137.1| cis-prenyltransferase, partial [Euphorbia characias]
Length = 163
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E C +K++ + LK I ++ DVEK+M+M VAPDPD+ IR+SGETR SNFLLW
Sbjct: 90 VEECCREKME-CEELKCGI------QMADVEKNMYMKVAPDPDVVIRTSGETRLSNFLLW 142
Query: 82 QTSNCSLYSPAALW 95
Q S LY+PA LW
Sbjct: 143 QASYSVLYAPATLW 156
>gi|14423546|gb|AAK62455.1|AF387010_1 Unknown protein [Arabidopsis thaliana]
gi|18377518|gb|AAL66925.1| unknown protein [Arabidopsis thaliana]
Length = 221
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 47 KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+LVD+E++M M+VAP+PDI IRSSGETR SNFLLWQT N L SPAALW
Sbjct: 144 QLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALW 192
>gi|20336659|gb|AAM19345.1|AF499435_1 hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 47 KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+LVD+E++M M+VAP+PDI IRSSGETR SNFLLWQT N L SPAALW
Sbjct: 218 QLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALW 266
>gi|18398467|ref|NP_565420.1| dehydrodolichyl diphosphate synthase 6 [Arabidopsis thaliana]
gi|84029498|sp|Q8S2T1.2|DDPS6_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 6;
Short=Dedol-PP synthase 6
gi|20198261|gb|AAD32914.2| expressed protein [Arabidopsis thaliana]
gi|61742588|gb|AAX55115.1| hypothetical protein At2g17570 [Arabidopsis thaliana]
gi|330251560|gb|AEC06654.1| dehydrodolichyl diphosphate synthase 6 [Arabidopsis thaliana]
Length = 295
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 47 KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+LVD+E++M M+VAP+PDI IRSSGETR SNFLLWQT N L SPAALW
Sbjct: 218 QLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALW 266
>gi|224157244|ref|XP_002337819.1| predicted protein [Populus trichocarpa]
gi|222869858|gb|EEF06989.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKE--------KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSS 70
V VQE C +K G L E K D ++ K+ DV+K+M+MA+A +PDI IR+S
Sbjct: 86 VHAVQESCREKWGGIIVLNESAEPEENEKNDGESFVKVTDVDKNMYMAIAAEPDILIRTS 145
Query: 71 GETRPSNFLLWQTSNCSLYSPAALWLE 97
G+TR S FLLWQT+ LY P+A W E
Sbjct: 146 GDTRLSYFLLWQTTCTYLYFPSAFWPE 172
>gi|224148360|ref|XP_002336638.1| predicted protein [Populus trichocarpa]
gi|222836414|gb|EEE74821.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
+VDV+ HM+M+VA +PDI IRSSGE R SNFLLWQTSNC LYSP
Sbjct: 145 VVDVDSHMYMSVATNPDIVIRSSGENRLSNFLLWQTSNCLLYSP 188
>gi|164605018|dbj|BAF98305.1| cis-prenyl transferase [Hevea brasiliensis]
Length = 296
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 14/87 (16%)
Query: 23 QEYCEDKLDGSQALKE------------KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSS 70
E C + ++ Q KE K + + KLVD+EK+ + + P PD+ IR+S
Sbjct: 184 NEVCNNGIEAEQEFKEANGTGNSVIPVQKTESYSGIKLVDLEKNTY--INPYPDVLIRTS 241
Query: 71 GETRPSNFLLWQTSNCSLYSPAALWLE 97
GETR SN+LLWQT+NC LYSP ALW E
Sbjct: 242 GETRLSNYLLWQTTNCILYSPYALWPE 268
>gi|22213585|gb|AAM92880.1| cis-prenyltransferase 1 [Hevea brasiliensis]
gi|22213603|gb|AAM92889.1| cis-prenyltransferase 10 [Hevea brasiliensis]
gi|22213605|gb|AAM92890.1| cis-prenyltransferase 11 [Hevea brasiliensis]
Length = 290
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQAL--KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSSTVIQTENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPYALW 260
>gi|22213587|gb|AAM92881.1| cis-prenyltransferase 2 [Hevea brasiliensis]
Length = 290
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQAL--KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSSTVIQTENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPYALW 260
>gi|164605016|dbj|BAF98304.1| cis-prenyl transferase [Hevea brasiliensis]
Length = 290
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQAL--KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSSTVIQTENMESYSGIKLVDLEKNTY--INPYPDVLIRASGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPYALW 260
>gi|40716449|gb|AAR88763.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQAL--KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSGTVIQTENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPYALW 260
>gi|60617766|gb|AAX31281.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQAL--KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSSTVIQTENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPYALW 260
>gi|148469574|gb|ABQ65716.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQAL--KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSGTVIQTENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPYALW 260
>gi|16751459|dbj|BAB71776.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQALK--EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSGTVIQIENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPHALW 260
>gi|20563020|dbj|BAB92023.1| cis-prenyltransferase1 [Hevea brasiliensis]
gi|22213591|gb|AAM92883.1| cis-prenyltransferase 4 [Hevea brasiliensis]
gi|22213593|gb|AAM92884.1| cis-prenyltransferase 5 [Hevea brasiliensis]
gi|22213595|gb|AAM92885.1| cis-prenyltransferase 6 [Hevea brasiliensis]
gi|22213599|gb|AAM92887.1| cis-prenyltransferase 8 [Hevea brasiliensis]
gi|22213601|gb|AAM92888.1| cis-prenyltransferase 9 [Hevea brasiliensis]
Length = 290
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQALK--EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 184 VCNNQELEEANATGSGTVIQIENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 241
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 242 NYLLWQTTNCILYSPHALW 260
>gi|22213621|gb|AAM92879.1| cis-prenyltransferase 12 [Hevea brasiliensis]
Length = 183
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 19 VPDVQEYCEDKLDGSQALK--EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPS 76
V + QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR S
Sbjct: 77 VCNNQELEEANATGSGTVIQIENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLS 134
Query: 77 NFLLWQTSNCSLYSPAALW 95
N+LLWQT+NC LYSP ALW
Sbjct: 135 NYLLWQTTNCILYSPHALW 153
>gi|16751461|dbj|BAB71777.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 12/89 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIK----------KLVDVEKHMFMAVAPDPDITIR 68
V V+E +DKL ++ + + IK KLV++E++ + + P PD+ IR
Sbjct: 170 VHAVEESSKDKLKSNEICNDGNGDCVIKIEEMEPYSEIKLVELERNTY--INPYPDVLIR 227
Query: 69 SSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+SGETR SN+LLWQT+NC LYSP ALW E
Sbjct: 228 TSGETRLSNYLLWQTTNCILYSPHALWPE 256
>gi|75248687|sp|Q8W3U4.1|HRT2_HEVBR RecName: Full=Rubber cis-polyprenyltransferase HRT2
gi|18148934|dbj|BAB83522.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
Query: 24 EYCEDKLDGSQALK-EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E C D +G +K E+++ + KLV++E++ + + P PD+ IR+SGETR SN+LLWQ
Sbjct: 185 EICNDG-NGDCVIKIEEMEPYSEIKLVELERNTY--INPYPDVLIRTSGETRLSNYLLWQ 241
Query: 83 TSNCSLYSPAALWLE 97
T+NC LYSP ALW E
Sbjct: 242 TTNCILYSPHALWPE 256
>gi|22213589|gb|AAM92882.1| cis-prenyltransferase 3 [Hevea brasiliensis]
gi|22213597|gb|AAM92886.1| cis-prenyltransferase 7 [Hevea brasiliensis]
gi|193876217|gb|ACF24746.1| cis-prenyl transferase II [Hevea brasiliensis]
gi|193876219|gb|ACF24747.1| cis-prenyl transferase II [Hevea brasiliensis]
gi|356934383|gb|AET42829.1| cis-prenyltransferase II [Hevea brasiliensis]
Length = 296
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 14/87 (16%)
Query: 23 QEYCEDKLDGSQALKE------------KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSS 70
E C + ++ Q KE K + + L D+EK+ + V P PD+ IR+S
Sbjct: 184 NEVCNNGIEAEQEFKEANGTGNSVIPVQKTESYSGINLADLEKNTY--VNPHPDVLIRTS 241
Query: 71 GETRPSNFLLWQTSNCSLYSPAALWLE 97
G +R SN+LLWQTSNC LYSP ALW E
Sbjct: 242 GLSRLSNYLLWQTSNCILYSPFALWPE 268
>gi|20563022|dbj|BAB92024.1| cis-prenyltransferase2 [Hevea brasiliensis]
Length = 290
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 23 QEYCEDKLDGSQALK--EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLL 80
QE E GS + E ++ + KLVD+EK+ + + P PD+ IR+SGETR SN+LL
Sbjct: 188 QELEEANATGSGTVIQIENMESYSGIKLVDLEKNTY--INPYPDVLIRTSGETRLSNYLL 245
Query: 81 WQTSNCSLYSPAALW 95
WQT+NC L SP ALW
Sbjct: 246 WQTTNCILDSPHALW 260
>gi|117626790|gb|ABK51403.1| LLA-66 [Lilium longiflorum]
Length = 308
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L D+E M+ PDPDI IR+SGETR SNF+LWQTS C LY+P LW
Sbjct: 205 LEDLEGKMYFERNPDPDILIRTSGETRLSNFVLWQTSFCLLYAPRCLW 252
>gi|357159657|ref|XP_003578517.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like
[Brachypodium distachyon]
Length = 299
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D+++HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 219 VADLDRHMYTAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPEPLWPE 268
>gi|357125154|ref|XP_003564260.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like
[Brachypodium distachyon]
Length = 302
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D+++HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 222 VADLDRHMYTAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPEPLWPE 271
>gi|115466642|ref|NP_001056920.1| Os06g0167400 [Oryza sativa Japonica Group]
gi|5091516|dbj|BAA78751.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|55296219|dbj|BAD67960.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|113594960|dbj|BAF18834.1| Os06g0167400 [Oryza sativa Japonica Group]
gi|215717034|dbj|BAG95397.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635028|gb|EEE65160.1| hypothetical protein OsJ_20261 [Oryza sativa Japonica Group]
Length = 299
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKK--------LVDVEKHMFMAVAPDPDITIRSS 70
V V + C ++ D + ++ D D++ + D+++HM+ A PDPDI IR+S
Sbjct: 186 VNAVNKVCAERRD----ILQREDADSVANNGVYSDISVADLDRHMYSAGCPDPDIVIRTS 241
Query: 71 GETRPSNFLLWQTSNCSLYSPAALWLE 97
GETR SNFLLWQT+ L +P LW E
Sbjct: 242 GETRLSNFLLWQTTFSHLQNPDPLWPE 268
>gi|449438566|ref|XP_004137059.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Cucumis
sativus]
Length = 304
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 19 VPDVQEYCEDKLD------------GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDIT 66
V V+ CE+K + G L + D L DVEKHM+ A PDPDI
Sbjct: 142 VHAVERSCEEKWNEMNSKTANGVGYGFGKLGVANNGDNSITLADVEKHMYTAATPDPDIL 201
Query: 67 IRSSGETRPSNFLLWQTSN 85
IR+SGE R SNFLLWQTS+
Sbjct: 202 IRTSGEARLSNFLLWQTSS 220
>gi|218197660|gb|EEC80087.1| hypothetical protein OsI_21824 [Oryza sativa Indica Group]
Length = 289
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKK--------LVDVEKHMFMAVAPDPDITIRSS 70
V V + C ++ D + ++ D D++ + D+++HM+ A PDPDI IR+S
Sbjct: 176 VNAVNKVCAERRD----ILQREDADSVANNGVYSDISVADLDRHMYSAGCPDPDIVIRTS 231
Query: 71 GETRPSNFLLWQTSNCSLYSPAALWLE 97
GETR SNFLLWQT+ L +P LW E
Sbjct: 232 GETRLSNFLLWQTTFSHLQNPDPLWPE 258
>gi|195626378|gb|ACG35019.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
Length = 303
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D+++HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 223 VADLDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPE 272
>gi|357153880|ref|XP_003576597.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like
[Brachypodium distachyon]
Length = 289
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D+++HM+ PDPDI IR+SGE R SNFLLWQT+ L SPA LW E
Sbjct: 209 VADLDRHMYSDGCPDPDIVIRTSGEARLSNFLLWQTTFSHLQSPAPLWPE 258
>gi|195604846|gb|ACG24253.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
gi|195625304|gb|ACG34482.1| dehydrodolichyl diphosphate synthase 6 [Zea mays]
Length = 303
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D+++HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 223 VADLDRHMYSAECPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPE 272
>gi|212723440|ref|NP_001131688.1| uncharacterized protein LOC100193048 [Zea mays]
gi|194692248|gb|ACF80208.1| unknown [Zea mays]
gi|224031727|gb|ACN34939.1| unknown [Zea mays]
gi|413952969|gb|AFW85618.1| dehydrodolichyl diphosphate synthase 6 isoform 1 [Zea mays]
gi|413952970|gb|AFW85619.1| dehydrodolichyl diphosphate synthase 6 isoform 2 [Zea mays]
Length = 303
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D+++HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 223 VADLDRHMYSAECPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPE 272
>gi|223944707|gb|ACN26437.1| unknown [Zea mays]
gi|238009764|gb|ACR35917.1| unknown [Zea mays]
gi|413952977|gb|AFW85626.1| hypothetical protein ZEAMMB73_795974 [Zea mays]
Length = 412
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ ++++HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 332 VAELDRHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPE 381
>gi|218199994|gb|EEC82421.1| hypothetical protein OsI_26813 [Oryza sativa Indica Group]
Length = 299
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D++ HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 219 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPE 268
>gi|115473277|ref|NP_001060237.1| Os07g0607700 [Oryza sativa Japonica Group]
gi|50508667|dbj|BAD31153.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|50509860|dbj|BAD32032.1| putative cis-prenyltransferase [Oryza sativa Japonica Group]
gi|113611773|dbj|BAF22151.1| Os07g0607700 [Oryza sativa Japonica Group]
gi|215697311|dbj|BAG91305.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 299
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D++ HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 219 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPE 268
>gi|125601027|gb|EAZ40603.1| hypothetical protein OsJ_25064 [Oryza sativa Japonica Group]
Length = 335
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ D++ HM+ A PDPDI IR+SGETR SNFLLWQT+ L +P LW E
Sbjct: 255 VADLDHHMYSAGCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPE 304
>gi|315654510|ref|ZP_07907416.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii ATCC 51333]
gi|315490974|gb|EFU80593.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii ATCC 51333]
Length = 258
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+EY + + L E D+ +L D+E H++ PDPD+ IR+SGE R S F
Sbjct: 161 VNAVREYLNEAAQKGETLAEVTDQ---LRLEDIEAHLYTKGQPDPDLVIRTSGEQRLSGF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++N Y W
Sbjct: 218 LLWQSANSEFYFCETYW 234
>gi|298345923|ref|YP_003718610.1| undecaprenyl pyrophosphate synthetase [Mobiluncus curtisii ATCC
43063]
gi|315657581|ref|ZP_07910463.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298235984|gb|ADI67116.1| undecaprenyl pyrophosphate synthetase [Mobiluncus curtisii ATCC
43063]
gi|315492053|gb|EFU81662.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 258
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+EY + + L E D+ +L D+E H++ PDPD+ IR+SGE R S F
Sbjct: 161 VNAVREYLTEAAQKGETLAEVTDQ---LRLEDIEAHLYTKGQPDPDLVIRTSGEQRLSGF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++N Y W
Sbjct: 218 LLWQSANSEFYFCETYW 234
>gi|269976189|ref|ZP_06183185.1| undecaprenyl pyrophosphate synthetase 1 [Mobiluncus mulieris 28-1]
gi|269935518|gb|EEZ92056.1| undecaprenyl pyrophosphate synthetase 1 [Mobiluncus mulieris 28-1]
Length = 258
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+EY ++ + L + E T++ D+E H++ PDPD+ IR+SGE R S F
Sbjct: 161 VAAVKEYLHEQAAAGRGLAQVEREITLE---DIEAHLYTKGQPDPDLVIRTSGEQRLSGF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++N Y W
Sbjct: 218 LLWQSANSEFYFCETYW 234
>gi|304390374|ref|ZP_07372327.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326130|gb|EFL93375.1| undecaprenyl diphosphate synthase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 258
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+EY + + L E D+ +L D+E H++ PDPD+ IR+SGE R S F
Sbjct: 161 VNAVREYLTEAAQKGETLAEVTDQ---LRLEDIEAHLYTKGQPDPDLVIRTSGEQRLSGF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++N Y W
Sbjct: 218 LLWQSANSEFYFCETYW 234
>gi|227876661|ref|ZP_03994770.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|307699880|ref|ZP_07636931.1| putative di-trans,poly-cis-decaprenylcistransferase [Mobiluncus
mulieris FB024-16]
gi|227842558|gb|EEJ52758.1| undecaprenyl pyrophosphate synthetase [Mobiluncus mulieris ATCC
35243]
gi|307614918|gb|EFN94136.1| putative di-trans,poly-cis-decaprenylcistransferase [Mobiluncus
mulieris FB024-16]
Length = 258
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+EY ++ + L + E T++ D+E H++ PDPD+ IR+SGE R S F
Sbjct: 161 VAAVKEYLHEQAAAGRGLAQVEREITLE---DIEAHLYTKGQPDPDLVIRTSGEQRLSGF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++N Y W
Sbjct: 218 LLWQSANSEFYFCETYW 234
>gi|306817611|ref|ZP_07451354.1| undecaprenyl diphosphate synthase [Mobiluncus mulieris ATCC 35239]
gi|304649653|gb|EFM46935.1| undecaprenyl diphosphate synthase [Mobiluncus mulieris ATCC 35239]
Length = 258
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+EY ++ + L + E T++ D+E H++ PDPD+ IR+SGE R S F
Sbjct: 161 VAAVKEYLHEQAAAGRGLAQVEREITLE---DIEAHLYTKGQPDPDLVIRTSGEQRLSGF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++N Y W
Sbjct: 218 LLWQSANSEFYFCETYW 234
>gi|171910871|ref|ZP_02926341.1| undecaprenyl-pyrophosphate synthetase [Verrucomicrobium spinosum
DSM 4136]
Length = 237
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTI-KKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ +DG ++L + +++ + K ++D E KH++ PDPD+ IR+SGE R SNFLLWQ
Sbjct: 139 EEIIDGIKSLIDSVEKGHLDKGMIDAEVFSKHLYTRYYPDPDLLIRTSGEMRLSNFLLWQ 198
Query: 83 TSNCSLYSPAALW 95
S Y LW
Sbjct: 199 LSYTEFYITQTLW 211
>gi|20807851|ref|NP_623022.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|254479462|ref|ZP_05092789.1| undecaprenyl pyrophosphate synthetase 1 [Carboxydibrachium
pacificum DSM 12653]
gi|42559997|sp|Q8RA26.1|ISPT_THETN RecName: Full=Isoprenyl transferase
gi|20516414|gb|AAM24626.1| Undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|214034605|gb|EEB75352.1| undecaprenyl pyrophosphate synthetase 1 [Carboxydibrachium
pacificum DSM 12653]
Length = 247
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V Q C+ L+ + E I EDTI + H++ A PDPD+ IR+SGE R SNF
Sbjct: 153 VKATQNICKKVLN-RELSPEDITEDTITQ------HLYTASQPDPDLIIRTSGEKRLSNF 205
Query: 79 LLWQTSNCSLYSPAALWLEEKKK 101
LLWQ++ L+ LW + KK+
Sbjct: 206 LLWQSAYSELWFTEVLWPDFKKR 228
>gi|392942697|ref|ZP_10308339.1| undecaprenyl diphosphate synthase [Frankia sp. QA3]
gi|392285991|gb|EIV92015.1| undecaprenyl diphosphate synthase [Frankia sp. QA3]
Length = 258
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 34 QALKEKIDE---------DTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
+AL+E + E DT L D+ +H++ A PDPD+ IR+SGE R SNFLLWQ
Sbjct: 162 EALREHLYERAEAGDSLADTAASLTMDDIARHLYTAGQPDPDLVIRTSGEQRMSNFLLWQ 221
Query: 83 TSNCSLYSPAALW 95
++ LY A W
Sbjct: 222 SAYSELYFCEAYW 234
>gi|171059527|ref|YP_001791876.1| undecaprenyl diphosphate synthase [Leptothrix cholodnii SP-6]
gi|170776972|gb|ACB35111.1| undecaprenyl diphosphate synthase [Leptothrix cholodnii SP-6]
Length = 257
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 21 DVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLL 80
DV + C L S ++IDE + +HM +A APDPD IR+ GE R SNFLL
Sbjct: 148 DVVQACR-ALVASGVTADQIDEAAL------SRHMSLAYAPDPDFFIRTGGEVRISNFLL 200
Query: 81 WQTSNCSLYSPAALW 95
WQ + LY LW
Sbjct: 201 WQAAYSELYFTDCLW 215
>gi|358460306|ref|ZP_09170492.1| Undecaprenyl pyrophosphate synthase [Frankia sp. CN3]
gi|357076449|gb|EHI85922.1| Undecaprenyl pyrophosphate synthase [Frankia sp. CN3]
Length = 249
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
DV +H++ A PDPD+ IR+SGE R SNFLLWQ++ LY A W
Sbjct: 180 DVARHLYTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYW 225
>gi|586925|sp|P20182.2|ISPT_STRFR RecName: Full=Isoprenyl transferase
Length = 259
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 34 QALKEKIDEDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
QA ED L D+ +H++ A PDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 172 QAAAGTTLEDLAASLTMDDITRHLYTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFC 231
Query: 92 AALW 95
A W
Sbjct: 232 EAYW 235
>gi|158314885|ref|YP_001507393.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
gi|158110290|gb|ABW12487.1| undecaprenyl diphosphate synthase [Frankia sp. EAN1pec]
Length = 258
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
DV +H++ A PDPD+ IR+SGE R SNFLLWQ++ LY A W
Sbjct: 189 DVARHLYTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYW 234
>gi|416186220|ref|ZP_11613581.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M0579]
gi|325137019|gb|EGC59615.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M0579]
Length = 248
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KI EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 KITEDTLAK------HLMLGNAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|256827505|ref|YP_003151464.1| UDP diphosphate synthase [Cryptobacterium curtum DSM 15641]
gi|256583648|gb|ACU94782.1| undecaprenyl diphosphate synthase [Cryptobacterium curtum DSM
15641]
Length = 289
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 22 VQEYCEDKLDGSQA-LKEKIDEDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+E +DG A L E I+ + ++ D+ +H++ A PDPD+ IR+SGE R SNF
Sbjct: 188 TEETAGLTVDGFDASLTEAIEHAKLPRITEEDISRHLYTADMPDPDLLIRTSGEMRVSNF 247
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + Y LW
Sbjct: 248 LLWQIAYAEFYVTDTLW 264
>gi|111222976|ref|YP_713770.1| undecaprenyl pyrophosphate synthetase [Frankia alni ACN14a]
gi|111150508|emb|CAJ62207.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Frankia alni
ACN14a]
Length = 258
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 47 KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ D+ +H++ A PDPD+ IR+SGE R SNFLLWQ++ LY A W
Sbjct: 186 RMDDIARHLYTAGQPDPDLVIRTSGEQRMSNFLLWQSAYSELYFCEAYW 234
>gi|381205011|ref|ZP_09912082.1| undecaprenyl pyrophosphate synthase [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 267
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
K++G + +I+E+TI + H++ + PDPD+ IR+SGE R SNFL+WQ +
Sbjct: 177 KIEGGELRVGEINEETINQ------HLYTSGLPDPDLIIRTSGEQRLSNFLIWQAAYAEF 230
Query: 89 YSPAALW 95
Y LW
Sbjct: 231 YYTEVLW 237
>gi|427391237|ref|ZP_18885643.1| di-trans,poly-cis-decaprenylcistransferase [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732197|gb|EKU95008.1| di-trans,poly-cis-decaprenylcistransferase [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 253
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 1 MHKSDDVQPLKINSLILP------VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKH 54
+H+++ + +++N + V V++Y ++ + +++ T+ + D H
Sbjct: 132 VHRTEGLPGMRVNVAVGYGGRQEIVDAVRDYLSEEASAGKTIEQAAQNLTLDDITD---H 188
Query: 55 MFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ A PDPD+ IR+SGE R S FLLWQ+ + LY A W
Sbjct: 189 LYTAGQPDPDLVIRTSGEQRMSGFLLWQSVHTELYFCEAYW 229
>gi|428177311|gb|EKX46191.1| hypothetical protein GUITHDRAFT_138320 [Guillardia theta CCMP2712]
Length = 269
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ +D DGS AL E IDE ++K+ H++ PDPD+ IR+SGE R SNF+LW
Sbjct: 179 VKKLAKDYADGSIAL-ESIDESSMKQ------HLYTPDIPDPDLMIRTSGEQRISNFMLW 231
Query: 82 QTSNCSLY 89
Q + LY
Sbjct: 232 QAAYSELY 239
>gi|86740912|ref|YP_481312.1| undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
gi|86567774|gb|ABD11583.1| Undecaprenyl pyrophosphate synthetase [Frankia sp. CcI3]
Length = 259
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H++ A PDPD+ IR+SGE R SNFLLWQ++ LY A W
Sbjct: 190 DIAQHLYTAGQPDPDLVIRTSGEQRLSNFLLWQSAYSELYFCEAYW 235
>gi|383807695|ref|ZP_09963255.1| putative undecaprenyl diphosphate synthase [Candidatus Aquiluna sp.
IMCC13023]
gi|383299049|gb|EIC91664.1| putative undecaprenyl diphosphate synthase [Candidatus Aquiluna sp.
IMCC13023]
Length = 253
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 37 KEKIDEDTIKKLVDV------EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
K D T+ +L +V +H++ PDPD+ IR+SGE R S FLLWQ++N Y
Sbjct: 165 KHSKDGSTVDQLAEVMTPELIAEHLYTGGQPDPDLLIRTSGEQRLSGFLLWQSANSEFYF 224
Query: 91 PAALW 95
ALW
Sbjct: 225 AEALW 229
>gi|284034435|ref|YP_003384366.1| UDP diphosphate synthase [Kribbella flavida DSM 17836]
gi|283813728|gb|ADB35567.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 261
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLY 89
D+ KH++ A PDPD+ IR+SGE R SNFLLWQ+++ LY
Sbjct: 195 DITKHLYTAGRPDPDLIIRTSGEQRMSNFLLWQSAHAELY 234
>gi|260892484|ref|YP_003238581.1| undecaprenyl diphosphate synthase [Ammonifex degensii KC4]
gi|260864625|gb|ACX51731.1| undecaprenyl diphosphate synthase [Ammonifex degensii KC4]
Length = 264
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDEDT V H++ A PDPD+ IR +GE R SNFLLWQ + LY W
Sbjct: 185 EEIDEDT------VAAHLYTAGLPDPDLLIRPAGEMRVSNFLLWQLAYTELYVTPVFW 236
>gi|269794157|ref|YP_003313612.1| UDP pyrophosphate synthetase [Sanguibacter keddieii DSM 10542]
gi|269096342|gb|ACZ20778.1| Undecaprenyl pyrophosphate synthetase [Sanguibacter keddieii DSM
10542]
Length = 251
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 3 KSDDVQPLKINSLIL-----PVPD-VQEYCEDKLDGSQALKE---KIDEDTIKKLVDVEK 53
++DDV+ L++N I + D V+ + ++ + +L E ID D I +
Sbjct: 132 ETDDVEGLQVNVAIGYGGRHEIADAVRAFLTERAEAGDSLAEVAASIDVDHIGQ------ 185
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H++ PDP++ IR+SGE R S FLLWQ++N Y A W
Sbjct: 186 HLYTRGQPDPELVIRTSGEQRLSGFLLWQSANSEFYFCEAYW 227
>gi|320449279|ref|YP_004201375.1| di-trans,poly-cis-decaprenylcistransferase [Thermus scotoductus
SA-01]
gi|320149448|gb|ADW20826.1| di-trans,poly-cis-decaprenylcistransferase [Thermus scotoductus
SA-01]
Length = 263
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
D+ +H++ A PDPD IR+SGE R S FLLWQ++ Y LW E +K
Sbjct: 194 DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|46199853|ref|YP_005520.1| undecaprenyl pyrophosphate synthase [Thermus thermophilus HB27]
gi|384432074|ref|YP_005641434.1| undecaprenyl diphosphate synthase [Thermus thermophilus
SG0.5JP17-16]
gi|42559907|sp|O87197.1|ISPT_THET2 RecName: Full=Isoprenyl transferase
gi|3724366|dbj|BAA33784.1| unknown ORF [Thermus thermophilus]
gi|46197480|gb|AAS81893.1| probable undecaprenyl pyrophosphate synthetase [Thermus
thermophilus HB27]
gi|333967542|gb|AEG34307.1| undecaprenyl diphosphate synthase [Thermus thermophilus
SG0.5JP17-16]
Length = 263
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
D+ +H++ A PDPD IR+SGE R S FLLWQ++ Y LW E +K
Sbjct: 194 DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|55981884|ref|YP_145181.1| UDP pyrophosphate synthase [Thermus thermophilus HB8]
gi|73920283|sp|Q5SH15.1|ISPT_THET8 RecName: Full=Isoprenyl transferase
gi|55773297|dbj|BAD71738.1| probable undecaprenyl pyrophosphate synthetase [Thermus
thermophilus HB8]
Length = 263
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
D+ +H++ A PDPD IR+SGE R S FLLWQ++ Y LW E +K
Sbjct: 194 DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|386361395|ref|YP_006059640.1| undecaprenyl diphosphate synthase [Thermus thermophilus JL-18]
gi|383510422|gb|AFH39854.1| undecaprenyl diphosphate synthase [Thermus thermophilus JL-18]
Length = 263
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
D+ +H++ A PDPD IR+SGE R S FLLWQ++ Y LW E +K
Sbjct: 194 DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|381191410|ref|ZP_09898920.1| undecaprenyl pyrophosphate synthase [Thermus sp. RL]
gi|380450770|gb|EIA38384.1| undecaprenyl pyrophosphate synthase [Thermus sp. RL]
Length = 263
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
D+ +H++ A PDPD IR+SGE R S FLLWQ++ Y LW E +K
Sbjct: 194 DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|86134479|ref|ZP_01053061.1| Di-trans,poly-cis-decaprenylcistransferase [Polaribacter sp.
MED152]
gi|85821342|gb|EAQ42489.1| Di-trans,poly-cis-decaprenylcistransferase [Polaribacter sp.
MED152]
Length = 247
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKIDE+TI H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 165 EKIDENTINN------HLYTFNLPDVDLMIRTSGEQRISNFLLWQMAYAELYFTNVLW 216
>gi|385854366|ref|YP_005900879.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240355]
gi|421560340|ref|ZP_16006199.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM2657]
gi|254670406|emb|CBA05957.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha153]
gi|325203307|gb|ADY98760.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240355]
gi|402340513|gb|EJU75713.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM2657]
Length = 248
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------HLMLGNAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|255067011|ref|ZP_05318866.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca ATCC
29256]
gi|340363670|ref|ZP_08685991.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria macacae ATCC
33926]
gi|349610628|ref|ZP_08889963.1| undecaprenyl pyrophosphate synthase [Neisseria sp. GT4A_CT1]
gi|419798246|ref|ZP_14323663.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca VK64]
gi|255048836|gb|EET44300.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca ATCC
29256]
gi|339885232|gb|EGQ74968.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria macacae ATCC
33926]
gi|348609611|gb|EGY59345.1| undecaprenyl pyrophosphate synthase [Neisseria sp. GT4A_CT1]
gi|385695447|gb|EIG26008.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sicca VK64]
Length = 248
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 5 DDVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVD-VEKHMFMAVAPDP 63
++ + L N+ L + +Y + D QA + I E + D + KH+ + AP+P
Sbjct: 122 EEAEALTANNTGLTLSIAADYG-GRWDILQAANKLIAEGVSEITEDALAKHLMLGDAPEP 180
Query: 64 DITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDTLW 212
>gi|261364374|ref|ZP_05977257.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria mucosa ATCC
25996]
gi|288567642|gb|EFC89202.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria mucosa ATCC
25996]
Length = 248
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 5 DDVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVD-VEKHMFMAVAPDP 63
++ + L N+ L + +Y + D QA + I E + D + KH+ + AP+P
Sbjct: 122 EEAEALTANNTGLTLSIAADYG-GRWDILQAANKLIAEGVSEITEDALAKHLMLGDAPEP 180
Query: 64 DITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDTLW 212
>gi|350572352|ref|ZP_08940653.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria wadsworthii
9715]
gi|349790279|gb|EGZ44196.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria wadsworthii
9715]
Length = 248
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H+ +A AP+PD+ IR+ GETR SNFLLWQ + Y LW
Sbjct: 166 ADLAEHLMLAEAPEPDLFIRTGGETRISNFLLWQMAYAEFYFTDTLW 212
>gi|432328537|ref|YP_007246681.1| undecaprenyl diphosphate synthase [Aciduliprofundum sp. MAR08-339]
gi|432135246|gb|AGB04515.1| undecaprenyl diphosphate synthase [Aciduliprofundum sp. MAR08-339]
Length = 258
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V ++E ++ +G + E IDE+ +V KH++ A PDPD+ +R+SGE R SNF
Sbjct: 165 VKAIKEIAQEVKEGKLKI-EDIDEN------EVRKHLYTAELPDPDLILRTSGEERISNF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ Y W
Sbjct: 218 LLWQSAYSEFYFADIYW 234
>gi|297527185|ref|YP_003669209.1| undecaprenyl diphosphate synthase [Staphylothermus hellenicus DSM
12710]
gi|297256101|gb|ADI32310.1| undecaprenyl diphosphate synthase [Staphylothermus hellenicus DSM
12710]
Length = 269
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E IDE+T ++++ PDPD+ IR+SGE R SNFLLWQ++ LY A W E
Sbjct: 194 ENIDEETF------SRYLYTNGCPDPDLIIRTSGEVRISNFLLWQSAYSELYFCEAYWPE 247
Query: 98 EKK 100
+K
Sbjct: 248 FRK 250
>gi|405982120|ref|ZP_11040444.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces neuii
BVS029A5]
gi|404390911|gb|EJZ85977.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces neuii
BVS029A5]
Length = 252
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+ ++ ++L+E D T++ D+ +H++ PDPD+ IR+SGE R S FLLW
Sbjct: 158 VRAILREQAQAGKSLEEVADGLTVR---DITEHLYTKGQPDPDLVIRTSGEQRLSGFLLW 214
Query: 82 QTSNCSLYSPAALW 95
Q+++ Y A W
Sbjct: 215 QSAHSEFYFCEAYW 228
>gi|416159277|ref|ZP_11605742.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis N1568]
gi|433472566|ref|ZP_20429936.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
97021]
gi|433480992|ref|ZP_20438264.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2006087]
gi|433483114|ref|ZP_20440352.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2002038]
gi|433485214|ref|ZP_20442420.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
97014]
gi|325129105|gb|EGC51954.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis N1568]
gi|432212450|gb|ELK68388.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
97021]
gi|432219345|gb|ELK75192.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2006087]
gi|432223560|gb|ELK79340.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2002038]
gi|432224674|gb|ELK80437.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
97014]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------HLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|304388990|ref|ZP_07371037.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
ATCC 13091]
gi|416181340|ref|ZP_11611586.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M13399]
gi|421541528|ref|ZP_15987645.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM255]
gi|421543591|ref|ZP_15989682.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM140]
gi|421558251|ref|ZP_16004135.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
92045]
gi|254672754|emb|CBA06773.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha275]
gi|304337124|gb|EFM03311.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
ATCC 13091]
gi|325135113|gb|EGC57740.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M13399]
gi|402319897|gb|EJU55401.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM255]
gi|402326433|gb|EJU61835.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM140]
gi|402338645|gb|EJU73876.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
92045]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 5 DDVQPLKINSLILPVPDVQEYCE--DKLDGSQALKEK----IDEDTIKKLVDVEKHMFMA 58
++ + L N+ L + +Y D L + L K I EDT+ K H+ +
Sbjct: 122 EEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAKGVSEITEDTLAK------HLMLG 175
Query: 59 VAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 176 DAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|433493779|ref|ZP_20450855.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM762]
gi|433495895|ref|ZP_20452944.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
M7089]
gi|433497895|ref|ZP_20454912.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
M7124]
gi|433499968|ref|ZP_20456960.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM174]
gi|432231957|gb|ELK87612.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM762]
gi|432237078|gb|ELK92678.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
M7124]
gi|432237537|gb|ELK93130.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
M7089]
gi|432237878|gb|ELK93467.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM174]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------HLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|15676113|ref|NP_273244.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis MC58]
gi|254805770|ref|YP_003083991.1| UDP pyrophosphate synthetase [Neisseria meningitidis alpha14]
gi|385323335|ref|YP_005877774.1| undecaprenyl pyrophosphate synthetase (UPP synthetase;
di-trans,poly-cis-decaprenylcistransferase; undecaprenyl
diphosphate synthase; UDS) [Neisseria meningitidis 8013]
gi|385327552|ref|YP_005881855.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
alpha710]
gi|385339229|ref|YP_005893101.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis G2136]
gi|385342773|ref|YP_005896644.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240149]
gi|385850456|ref|YP_005896971.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M04-240196]
gi|385852395|ref|YP_005898909.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis H44/76]
gi|385856334|ref|YP_005902846.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
NZ-05/33]
gi|416167812|ref|ZP_11607748.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
OX99.30304]
gi|416176368|ref|ZP_11609618.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M6190]
gi|416190020|ref|ZP_11615500.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
ES14902]
gi|416194768|ref|ZP_11617485.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis CU385]
gi|416211586|ref|ZP_11621455.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240013]
gi|418287392|ref|ZP_12900000.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM233]
gi|421537227|ref|ZP_15983415.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
93003]
gi|421539381|ref|ZP_15985543.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
93004]
gi|421545650|ref|ZP_15991710.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM183]
gi|421547719|ref|ZP_15993751.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM2781]
gi|421551930|ref|ZP_15997911.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM576]
gi|421553935|ref|ZP_15999886.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
98008]
gi|421566658|ref|ZP_16012401.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3001]
gi|427826468|ref|ZP_18993519.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
H44/76]
gi|433464179|ref|ZP_20421673.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM422]
gi|433466299|ref|ZP_20423762.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
87255]
gi|433468420|ref|ZP_20425857.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
98080]
gi|433487384|ref|ZP_20444563.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
M13255]
gi|433489558|ref|ZP_20446697.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM418]
gi|433491657|ref|ZP_20448760.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM586]
gi|433502007|ref|ZP_20458980.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM126]
gi|433504058|ref|ZP_20461003.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
9506]
gi|433506239|ref|ZP_20463158.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
9757]
gi|433508381|ref|ZP_20465267.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
12888]
gi|433510456|ref|ZP_20467299.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
4119]
gi|42559884|sp|Q9K1G6.1|ISPT_NEIMB RecName: Full=Isoprenyl transferase
gi|7225405|gb|AAF40643.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis MC58]
gi|254669312|emb|CBA08317.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha14]
gi|261391722|emb|CAX49171.1| undecaprenyl pyrophosphate synthetase (UPP synthetase;
di-trans,poly-cis-decaprenylcistransferase; undecaprenyl
diphosphate synthase; UDS) [Neisseria meningitidis 8013]
gi|308388404|gb|ADO30724.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
alpha710]
gi|316985711|gb|EFV64657.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
H44/76]
gi|325131043|gb|EGC53768.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
OX99.30304]
gi|325133100|gb|EGC55772.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis M6190]
gi|325139078|gb|EGC61624.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
ES14902]
gi|325141200|gb|EGC63700.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis CU385]
gi|325145383|gb|EGC67660.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240013]
gi|325197473|gb|ADY92929.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis G2136]
gi|325199399|gb|ADY94854.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis H44/76]
gi|325202979|gb|ADY98433.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M01-240149]
gi|325205279|gb|ADZ00732.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
M04-240196]
gi|325207223|gb|ADZ02675.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
NZ-05/33]
gi|372203816|gb|EHP17418.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM233]
gi|389604804|emb|CCA43730.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis
alpha522]
gi|402319704|gb|EJU55209.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
93003]
gi|402321961|gb|EJU57432.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
93004]
gi|402325878|gb|EJU61285.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM183]
gi|402327739|gb|EJU63126.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM2781]
gi|402332846|gb|EJU68164.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM576]
gi|402333971|gb|EJU69266.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
98008]
gi|402345082|gb|EJU80209.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3001]
gi|432205087|gb|ELK61118.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
87255]
gi|432205989|gb|ELK62004.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM422]
gi|432206506|gb|ELK62513.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
98080]
gi|432226149|gb|ELK81882.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
M13255]
gi|432230554|gb|ELK86229.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM418]
gi|432231342|gb|ELK87009.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM586]
gi|432243441|gb|ELK98952.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
9506]
gi|432243762|gb|ELK99268.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM126]
gi|432244255|gb|ELK99750.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
9757]
gi|432250032|gb|ELL05430.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
12888]
gi|432250524|gb|ELL05917.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
4119]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------HLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|385338914|ref|YP_005892787.1| undecaprenyl pyrophosphate synthetase [Neisseria meningitidis WUE
2594]
gi|418289638|ref|ZP_12901902.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM220]
gi|421562411|ref|ZP_16008238.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM2795]
gi|421907608|ref|ZP_16337483.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
alpha704]
gi|433474662|ref|ZP_20432010.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
88050]
gi|433512546|ref|ZP_20469348.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
63049]
gi|433514687|ref|ZP_20471463.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2004090]
gi|433516773|ref|ZP_20473527.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
96023]
gi|433523126|ref|ZP_20479799.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
97020]
gi|433527350|ref|ZP_20483963.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3652]
gi|433529441|ref|ZP_20486041.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3642]
gi|433531563|ref|ZP_20488132.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2007056]
gi|433533711|ref|ZP_20490260.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2001212]
gi|319411328|emb|CBY91739.1| undecaprenyl pyrophosphate synthetase (UPP synthetase;
di-trans,poly-cis-decaprenylcistransferase; undecaprenyl
diphosphate synthase; UDS) [Neisseria meningitidis WUE
2594]
gi|372203187|gb|EHP16898.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM220]
gi|393291277|emb|CCI73480.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
alpha704]
gi|402343067|gb|EJU78222.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM2795]
gi|432212722|gb|ELK68657.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
88050]
gi|432250301|gb|ELL05696.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
63049]
gi|432256351|gb|ELL11674.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2004090]
gi|432256565|gb|ELL11887.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
96023]
gi|432262999|gb|ELL18230.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
97020]
gi|432267419|gb|ELL22597.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3652]
gi|432269583|gb|ELL24740.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2007056]
gi|432270092|gb|ELL25239.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3642]
gi|432274264|gb|ELL29357.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
2001212]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------HLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|221194519|ref|ZP_03567576.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium rimae ATCC
49626]
gi|221185423|gb|EEE17813.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium rimae ATCC
49626]
Length = 260
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+EK+++ A PDPD+ IR+SGE R SN+LLWQ + LY LW
Sbjct: 188 DIEKNLYTAGLPDPDLLIRTSGEKRLSNYLLWQIAYSELYITPVLW 233
>gi|59802115|ref|YP_208827.1| undecaprenyl diphosphate synthase [Neisseria gonorrhoeae FA 1090]
gi|194099963|ref|YP_002003102.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|240015051|ref|ZP_04721964.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
DGI18]
gi|240017500|ref|ZP_04724040.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA6140]
gi|240122120|ref|ZP_04735082.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
PID24-1]
gi|254494675|ref|ZP_05107846.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 1291]
gi|268599985|ref|ZP_06134152.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae MS11]
gi|268602322|ref|ZP_06136489.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID18]
gi|268604585|ref|ZP_06138752.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID1]
gi|268683042|ref|ZP_06149904.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
PID332]
gi|268683290|ref|ZP_06150152.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-92-679]
gi|268687471|ref|ZP_06154333.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-93-1035]
gi|291042823|ref|ZP_06568564.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae DGI2]
gi|293398156|ref|ZP_06642361.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria gonorrhoeae
F62]
gi|385336872|ref|YP_005890819.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
TCDC-NG08107]
gi|73920269|sp|Q5F5X2.1|ISPT_NEIG1 RecName: Full=Isoprenyl transferase
gi|59719010|gb|AAW90415.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
FA 1090]
gi|193935253|gb|ACF31077.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
NCCP11945]
gi|226513715|gb|EEH63060.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 1291]
gi|268584116|gb|EEZ48792.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae MS11]
gi|268586453|gb|EEZ51129.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID18]
gi|268588716|gb|EEZ53392.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae PID1]
gi|268623326|gb|EEZ55726.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
PID332]
gi|268623574|gb|EEZ55974.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-92-679]
gi|268627755|gb|EEZ60155.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae
SK-93-1035]
gi|291013257|gb|EFE05223.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae DGI2]
gi|291611419|gb|EFF40489.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria gonorrhoeae
F62]
gi|317165415|gb|ADV08956.1| putative undecaprenyl diphosphate synthase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------HLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|421863352|ref|ZP_16295050.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379114|emb|CBX22245.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 248
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 5 DDVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVD-VEKHMFMAVAPDP 63
++ + L N+ L + +Y + D QA + I E + D + KH+ + AP+P
Sbjct: 122 EEAEALTANNTGLTLSIAADYG-GRWDILQAANKLIAEGVSEITEDTLAKHLMLGDAPEP 180
Query: 64 DITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|161870877|ref|YP_001600051.1| undecaprenyl diphosphate synthase [Neisseria meningitidis 053442]
gi|161596430|gb|ABX74090.1| undecaprenyl diphosphate synthase [Neisseria meningitidis 053442]
Length = 257
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 5 DDVQPLKINSLILPVPDVQEYCE--DKLDGSQALKEK----IDEDTIKKLVDVEKHMFMA 58
++ + L N+ L + +Y D L + L K I EDT+ K H+ +
Sbjct: 131 EEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAKGVSEITEDTLAK------HLMLG 184
Query: 59 VAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 185 DAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 221
>gi|121634061|ref|YP_974306.1| undecaprenyl diphosphate synthase [Neisseria meningitidis FAM18]
gi|120865767|emb|CAM09496.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
FAM18]
Length = 257
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 171 EITEDTLAK------HLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 221
>gi|268593820|ref|ZP_06127987.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 35/02]
gi|268597737|ref|ZP_06131904.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae FA19]
gi|268547209|gb|EEZ42627.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae 35/02]
gi|268551525|gb|EEZ46544.1| undecaprenyl pyrophosphate synthetase [Neisseria gonorrhoeae FA19]
Length = 257
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K H+ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 171 EITEDTLAK------HLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 221
>gi|170289220|ref|YP_001739458.1| undecaprenyl pyrophosphate synthase [Thermotoga sp. RQ2]
gi|170176723|gb|ACB09775.1| undecaprenyl diphosphate synthase [Thermotoga sp. RQ2]
Length = 233
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
D SQ K ++ E+T ++ ++++ PDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 147 DASQGKKIELTEETFRQ------YLYLPDVPDPDLIIRTSGEMRLSNFLLWQSAYSELYF 200
Query: 91 PAALW 95
LW
Sbjct: 201 FKKLW 205
>gi|443243548|ref|YP_007376773.1| undecaprenyl pyrophosphate synthetase [Nonlabens dokdonensis DSW-6]
gi|442800947|gb|AGC76752.1| undecaprenyl pyrophosphate synthetase [Nonlabens dokdonensis DSW-6]
Length = 244
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
DGS + ++ID D I K H++ + PD D+ IR+SGE R SNFLLWQ + LY
Sbjct: 158 DGSLEI-DQIDTDIINK------HLYTSYMPDVDLLIRTSGEQRISNFLLWQIAYAELYF 210
Query: 91 PAALW 95
LW
Sbjct: 211 TEVLW 215
>gi|427734433|ref|YP_007053977.1| undecaprenyl pyrophosphate synthetase [Rivularia sp. PCC 7116]
gi|427369474|gb|AFY53430.1| Undecaprenyl pyrophosphate synthetase [Rivularia sp. PCC 7116]
Length = 249
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 30 LDGSQALKEKIDEDTIKKL----VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
+ QA+ EK+D+ I+ E H++ A DPD+ IR+SGE R SNFLLWQ +
Sbjct: 155 IQACQAIAEKVDKGLIQPHEIDEATFEHHLYTARHCDPDLIIRTSGEMRLSNFLLWQAAY 214
Query: 86 CSLYSPAALW 95
+Y LW
Sbjct: 215 SEIYFTDTLW 224
>gi|297572049|ref|YP_003697823.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
gi|296932396|gb|ADH93204.1| undecaprenyl diphosphate synthase [Arcanobacterium haemolyticum DSM
20595]
Length = 252
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
VQ+Y ++ L+E T+ + + HM+ PDPD+ IR+SGE R S F+LW
Sbjct: 158 VQDYLREQAQSGATLEEVASSITVDAITN---HMYTKGQPDPDLIIRTSGEQRMSGFMLW 214
Query: 82 QTSNCSLYSPAALW 95
QT + LY W
Sbjct: 215 QTVHTELYFCETYW 228
>gi|390938758|ref|YP_006402496.1| undecaprenyl diphosphate synthase [Desulfurococcus fermentans DSM
16532]
gi|390191865|gb|AFL66921.1| undecaprenyl diphosphate synthase [Desulfurococcus fermentans DSM
16532]
Length = 278
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
+AL+ KI D I + + ++++ APDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 194 EALEGKISLDDINEEL-FSRYLYTNGAPDPDLIIRTSGEERISNFLLWQSAYSELYFCDV 252
Query: 94 LWLEEKK 100
W E +K
Sbjct: 253 FWPEFRK 259
>gi|357394229|ref|YP_004909070.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
gi|311900706|dbj|BAJ33114.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 269
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
+AL E++ D I + H+ A PDPD+ IR+SGE R SNFLLWQ++ LY A
Sbjct: 190 RALAEELTADHIAR------HLHTAGHPDPDLVIRTSGEQRMSNFLLWQSAYAELYFADA 243
Query: 94 LW 95
W
Sbjct: 244 HW 245
>gi|71907376|ref|YP_284963.1| UDP pyrophosphate synthetase [Dechloromonas aromatica RCB]
gi|71846997|gb|AAZ46493.1| Undecaprenyl pyrophosphate synthetase [Dechloromonas aromatica RCB]
Length = 253
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+E H+ M+ AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 173 DLEPHLSMSFAPEPDLFIRTGGEERISNFLLWQLAYTELYFTPTLW 218
>gi|269219220|ref|ZP_06163074.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
gi|269211367|gb|EEZ77707.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 848 str. F0332]
Length = 255
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 3 KSDDVQPLKINSLILPVPDVQEYCE--DKLDGSQALKEKIDEDTIK--KLVDVEKHMFMA 58
K+ DV+ +++N + + QE + L QA K + + K+ D+ H++
Sbjct: 136 KTSDVKGMQVN-IAVGYGGRQEITDAVRSLLAEQATSGKTLAEVARSIKVDDITDHLYTK 194
Query: 59 VAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
PDPD+ IR+SGE R S F+LWQT + LY A W
Sbjct: 195 GQPDPDLVIRTSGEQRMSGFMLWQTVHTELYFCEAYW 231
>gi|390947198|ref|YP_006410958.1| undecaprenyl pyrophosphate synthetase [Alistipes finegoldii DSM
17242]
gi|390423767|gb|AFL78273.1| Undecaprenyl pyrophosphate synthetase [Alistipes finegoldii DSM
17242]
Length = 237
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+I E TI +D + P+PD+ +R+SGE R SNFLLWQ S LY P LW
Sbjct: 160 EEISEGTISAALDTAPY------PNPDLIVRTSGEHRLSNFLLWQASYAELYFPEVLW 211
>gi|221632995|ref|YP_002522218.1| UDP diphosphate synthase [Thermomicrobium roseum DSM 5159]
gi|221156565|gb|ACM05692.1| undecaprenyl diphosphate synthase [Thermomicrobium roseum DSM 5159]
Length = 327
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 34 QALKEKIDEDTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
QA++ + E +++D VE++++ A PDPD+ IR+SGE R SNF LWQ + Y
Sbjct: 221 QAIRRIVAEGVPPEMIDEATVERYLYTAGMPDPDLIIRTSGELRTSNFFLWQAAYAEYYF 280
Query: 91 PAALW 95
LW
Sbjct: 281 TPTLW 285
>gi|188996579|ref|YP_001930830.1| undecaprenyl diphosphate synthase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931646|gb|ACD66276.1| undecaprenyl diphosphate synthase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 231
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKIDE++ + ++++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 155 EKIDEESFRN------YLYLPEIPDPDLLIRTSGEKRISNFLLWQLAYTELYFTDVLW 206
>gi|451947682|ref|YP_007468277.1| Undecaprenyl pyrophosphate synthetase [Desulfocapsa sulfexigens DSM
10523]
gi|451907030|gb|AGF78624.1| Undecaprenyl pyrophosphate synthetase [Desulfocapsa sulfexigens DSM
10523]
Length = 248
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+ + +G AL + IDE KL+D H++ A PDPD+ IR+ GE R SNF
Sbjct: 147 VRGVRMIAREVSEGQYALDD-IDE----KLID--SHLYTAGLPDPDLLIRTGGEARLSNF 199
Query: 79 LLWQTSNCSLYSPAALWLE 97
LLWQ S +Y +W E
Sbjct: 200 LLWQASYAEIYFTDIMWPE 218
>gi|334364342|ref|ZP_08513334.1| di-trans,poly-cis-decaprenylcistransferase [Alistipes sp. HGB5]
gi|313159537|gb|EFR58900.1| di-trans,poly-cis-decaprenylcistransferase [Alistipes sp. HGB5]
Length = 241
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+I E TI +D + P+PD+ +R+SGE R SNFLLWQ S LY P LW
Sbjct: 164 EEISEGTISAALDTAPY------PNPDLIVRTSGEHRLSNFLLWQASYAELYFPEVLW 215
>gi|119512924|ref|ZP_01631987.1| undecaprenyl pyrophosphate synthetase [Nodularia spumigena CCY9414]
gi|119462420|gb|EAW43394.1| undecaprenyl pyrophosphate synthetase [Nodularia spumigena CCY9414]
Length = 249
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
++ L +A+ +K+ + I+ +D E+H++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 152 QEILQACRAIAQKVQQGVIQPDEIDEQLFERHLYTAGITDPDLLIRTSGEMRLSNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y ALW
Sbjct: 212 MAYGEIYITDALW 224
>gi|334130473|ref|ZP_08504270.1| Undecaprenyl pyrophosphate synthetase [Methyloversatilis
universalis FAM5]
gi|333444582|gb|EGK72531.1| Undecaprenyl pyrophosphate synthetase [Methyloversatilis
universalis FAM5]
Length = 249
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++E H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY +LW E
Sbjct: 166 ELEPHLSMAFAPEPDLFIRTGGEKRISNFLLWQLAYTELYFTDSLWPE 213
>gi|303232719|ref|ZP_07319404.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae
PB189-T1-4]
gi|302481205|gb|EFL44280.1| di-trans,poly-cis-decaprenylcistransferase [Atopobium vaginae
PB189-T1-4]
Length = 266
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
C+ DG+ A+ + I EDTI ++ A PDPD+ IR+SGE R SN+LLWQ +
Sbjct: 179 CKQVHDGTLAIDD-ITEDTIAS------RLYTAQLPDPDLLIRTSGEMRLSNYLLWQLAY 231
Query: 86 CSLYSPAALW 95
LY LW
Sbjct: 232 SELYVTPVLW 241
>gi|227082380|ref|YP_002810931.1| UDP diphosphate synthase [Vibrio cholerae M66-2]
gi|298500369|ref|ZP_07010174.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae MAK
757]
gi|227010268|gb|ACP06480.1| undecaprenyl diphosphate synthase [Vibrio cholerae M66-2]
gi|297541062|gb|EFH77116.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae MAK
757]
Length = 256
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 16/78 (20%)
Query: 28 DKLDGSQALKEK----------IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
D L +QAL EK IDED K+ H+ MA PD D+ IR+SGE R SN
Sbjct: 150 DILQATQALAEKVTQGELQPSDIDEDVFKQ------HLTMADLPDVDLLIRTSGECRISN 203
Query: 78 FLLWQTSNCSLYSPAALW 95
F+LWQ + +Y W
Sbjct: 204 FMLWQLAYAEMYFTPVFW 221
>gi|257784512|ref|YP_003179729.1| undecaprenyl diphosphate synthase [Atopobium parvulum DSM 20469]
gi|257473019|gb|ACV51138.1| undecaprenyl diphosphate synthase [Atopobium parvulum DSM 20469]
Length = 259
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
+Q + K+ D++ D EK+++ A PDPD+ IR+SGE R SN+LLWQ + LY
Sbjct: 171 ANQIAEGKVSADSVTP-SDFEKYLYTAGLPDPDLLIRTSGELRLSNYLLWQLAYSELYVT 229
Query: 92 AALW 95
W
Sbjct: 230 QTYW 233
>gi|254166833|ref|ZP_04873687.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|289596094|ref|YP_003482790.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|197624443|gb|EDY37004.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|289533881|gb|ADD08228.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
Length = 258
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ ++E ++ DG + E I E+T++K H++ PDPD+ +R+SGE R SNF
Sbjct: 165 IKAIKEIAQEVKDGKLEV-EDITEETVRK------HLYTGDLPDPDLILRTSGEERISNF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ Y W
Sbjct: 218 LLWQSAYSEFYFADIYW 234
>gi|254168484|ref|ZP_04875328.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
gi|197622539|gb|EDY35110.1| undecaprenyl diphosphate synthase [Aciduliprofundum boonei T469]
Length = 258
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ ++E ++ DG + E I E+T++K H++ PDPD+ +R+SGE R SNF
Sbjct: 165 IKAIKEIAQEVKDGKLEV-EDITEETVRK------HLYTGDLPDPDLILRTSGEERISNF 217
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ Y W
Sbjct: 218 LLWQSAYSEFYFADIYW 234
>gi|15642254|ref|NP_231887.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|147675134|ref|YP_001217771.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
gi|153820413|ref|ZP_01973080.1| undecaprenyl diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|227118702|ref|YP_002820598.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
gi|9656817|gb|AAF95400.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|126509041|gb|EAZ71635.1| undecaprenyl diphosphate synthase [Vibrio cholerae NCTC 8457]
gi|146317017|gb|ABQ21556.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
gi|227014152|gb|ACP10362.1| undecaprenyl diphosphate synthase [Vibrio cholerae O395]
Length = 256
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 16/78 (20%)
Query: 28 DKLDGSQALKEK----------IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
D L +QAL EK IDED K+ H+ MA PD D+ IR+SGE R SN
Sbjct: 150 DILQATQALAEKVTQGELQPSDIDEDVFKQ------HLTMADLPDVDLLIRTSGECRISN 203
Query: 78 FLLWQTSNCSLYSPAALW 95
F+LWQ + +Y W
Sbjct: 204 FMLWQLAYAEMYFTPVFW 221
>gi|298207449|ref|YP_003715628.1| UDP pyrophosphate synthase [Croceibacter atlanticus HTCC2559]
gi|83850085|gb|EAP87953.1| Undecaprenyl pyrophosphate synthase [Croceibacter atlanticus
HTCC2559]
Length = 258
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 32 GSQALKEKID-EDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
G Q +I ED KL+ E+H++ PD D+ IR+SGE R SNFLLWQ + L+
Sbjct: 166 GEQVASNQITPEDITTKLI--EEHLYTNFLPDVDLLIRTSGEQRISNFLLWQIAYAELFF 223
Query: 91 PAALWLEEKKK 101
LW + +KK
Sbjct: 224 TEVLWPDFRKK 234
>gi|126466136|ref|YP_001041245.1| undecaprenyl pyrophosphate synthetase [Staphylothermus marinus F1]
gi|126014959|gb|ABN70337.1| Undecaprenyl pyrophosphate synthetase [Staphylothermus marinus F1]
Length = 269
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E I+E+T ++++ PDPD+ IR+SGE R SNFLLWQ++ LY A W E
Sbjct: 194 ESINEETF------SRYLYTNGCPDPDLIIRTSGEVRISNFLLWQSAYSELYFCEAYWPE 247
Query: 98 EKK 100
+K
Sbjct: 248 FRK 250
>gi|209526838|ref|ZP_03275358.1| undecaprenyl diphosphate synthase [Arthrospira maxima CS-328]
gi|209492709|gb|EDZ93044.1| undecaprenyl diphosphate synthase [Arthrospira maxima CS-328]
Length = 253
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 14 SLILPVPDVQEYCEDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRS 69
++L V E+ + QA+ ++ + T++ + +D EK+++ A DPD+ IR+
Sbjct: 139 GILLTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTSDPDLLIRT 198
Query: 70 SGETRPSNFLLWQTSNCSLYSPAALW 95
SGE R SNFLLWQ + +Y LW
Sbjct: 199 SGELRISNFLLWQIAYAEIYVTETLW 224
>gi|433525302|ref|ZP_20481948.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
69096]
gi|432263450|gb|ELL18670.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
69096]
Length = 248
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 5 DDVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVD-VEKHMFMAVAPDP 63
++ + L N+ L + +Y + D QA + I E + D + K++ + AP+P
Sbjct: 122 EEAEALTANNTGLTLSIAADYG-GRWDILQAANKLIAEGVSEITADTLAKYLMLGDAPEP 180
Query: 64 DITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|350413088|ref|XP_003489875.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Bombus
impatiens]
Length = 295
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 21 DVQEYCEDKLDGSQ---ALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
++ +D ++G Q L E IDE+ I ++ +P+PD+ IR+SGE R S+
Sbjct: 161 EITHAIKDVIEGVQNGDILSEDIDENLISNC------LYTNYSPNPDLLIRTSGEVRFSD 214
Query: 78 FLLWQTSNCSLYSPAALW 95
FL+WQ SN +Y LW
Sbjct: 215 FLMWQISNTCIYFTTVLW 232
>gi|218884238|ref|YP_002428620.1| undecaprenyl diphosphate synthase [Desulfurococcus kamchatkensis
1221n]
gi|218765854|gb|ACL11253.1| undecaprenyl diphosphate synthase [Desulfurococcus kamchatkensis
1221n]
Length = 261
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+ ++ L+G L E I+E+ K +++ APDPD+ IR+SGE R SNFLLW
Sbjct: 171 VKAIVKEALEGKIGL-EDINEELFSK------YLYTNGAPDPDLIIRTSGEERISNFLLW 223
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ LY W E +K
Sbjct: 224 QSAYSELYFCDVFWPEFRK 242
>gi|126439718|ref|YP_001059465.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 668]
gi|126219211|gb|ABN82717.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 668]
Length = 260
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y A W
Sbjct: 169 EIDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDAFW 219
>gi|321460681|gb|EFX71721.1| hypothetical protein DAPPUDRAFT_189103 [Daphnia pulex]
Length = 256
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDED I+K ++ + PD+ IRSSGE R S+FLLWQT+ C+LY LW
Sbjct: 181 EDIDEDLIQKC------LYTRHSLQPDLLIRSSGEVRLSDFLLWQTTCCTLYFTPVLW 232
>gi|386842206|ref|YP_006247264.1| undecaprenyl diphosphate synthase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374102507|gb|AEY91391.1| undecaprenyl diphosphate synthase [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451795500|gb|AGF65549.1| undecaprenyl diphosphate synthase [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 257
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
+DK + L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AQDKGVSMEDLAESVDIDMIGR------HLYTGAQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCEVFW 233
>gi|434389488|ref|YP_007100099.1| undecaprenyl diphosphate synthase [Chamaesiphon minutus PCC 6605]
gi|428020478|gb|AFY96572.1| undecaprenyl diphosphate synthase [Chamaesiphon minutus PCC 6605]
Length = 249
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 34 QALKEKIDEDTIKKL-VD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLY 89
QA+ ++ + IK + +D + KH+ A PDPD+ IR+SGE R SNFLLWQ + +Y
Sbjct: 159 QAIATQVQQGLIKAIEIDEHLLSKHLHTADLPDPDLLIRTSGEMRISNFLLWQLAYAEIY 218
Query: 90 SPAALW 95
LW
Sbjct: 219 VTDTLW 224
>gi|441523031|ref|ZP_21004666.1| undecaprenyl pyrophosphate synthase [Gordonia sihwensis NBRC
108236]
gi|441457349|dbj|GAC62627.1| undecaprenyl pyrophosphate synthase [Gordonia sihwensis NBRC
108236]
Length = 260
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ+ + L + +E +D T++ ++ H++ + PDPD+ IR+SGE R S F
Sbjct: 163 VDAVQQLLIEALAAGASSEELVDAVTVEG---IDSHLYTSGTPDPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|375097061|ref|ZP_09743326.1| undecaprenyl diphosphate synthase [Saccharomonospora marina XMU15]
gi|374657794|gb|EHR52627.1| undecaprenyl diphosphate synthase [Saccharomonospora marina XMU15]
Length = 259
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
LK+ DE T + K++DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 169 LKQHADEGTSIHELAKILDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 228
Query: 89 YSPAALW 95
+ A W
Sbjct: 229 WFTEAYW 235
>gi|262167721|ref|ZP_06035423.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC27]
gi|262023786|gb|EEY42485.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC27]
Length = 157
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 16/78 (20%)
Query: 28 DKLDGSQALKEK----------IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
D L +QAL EK IDED K+ H+ MA PD D+ IR+SGE R SN
Sbjct: 51 DILQATQALAEKVTQGELQPSDIDEDVFKQ------HLTMADLPDVDLLIRTSGECRISN 104
Query: 78 FLLWQTSNCSLYSPAALW 95
F+LWQ + +Y W
Sbjct: 105 FMLWQLAYAEMYFTPVFW 122
>gi|254849386|ref|ZP_05238736.1| undecaprenyl diphosphate synthase [Vibrio cholerae MO10]
gi|254845091|gb|EET23505.1| undecaprenyl diphosphate synthase [Vibrio cholerae MO10]
Length = 253
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 16/78 (20%)
Query: 28 DKLDGSQALKEK----------IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
D L +QAL EK IDED K+ H+ MA PD D+ IR+SGE R SN
Sbjct: 147 DILQATQALAEKVTQGELQPSDIDEDVFKQ------HLTMADLPDVDLLIRTSGECRISN 200
Query: 78 FLLWQTSNCSLYSPAALW 95
F+LWQ + +Y W
Sbjct: 201 FMLWQLAYAEMYFTPVFW 218
>gi|443327771|ref|ZP_21056380.1| undecaprenyl diphosphate synthase [Xenococcus sp. PCC 7305]
gi|442792606|gb|ELS02084.1| undecaprenyl diphosphate synthase [Xenococcus sp. PCC 7305]
Length = 251
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
+K+ + + IDE+TI + +++ + +PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 162 EKVSTGELAPDTIDENTISQ------YLYTSASPDPDLLIRTSGEMRLSNFLLWQLAYTE 215
Query: 88 LYSPAALW 95
+Y LW
Sbjct: 216 MYITDTLW 223
>gi|427727392|ref|YP_007073629.1| undecaprenyl diphosphate synthase [Nostoc sp. PCC 7524]
gi|427363311|gb|AFY46032.1| undecaprenyl diphosphate synthase [Nostoc sp. PCC 7524]
Length = 249
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 27 EDKLDGSQALKEKIDE-----DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ L +A+ +K+ + D I + V E+H++ A DPD+ IR+SGE R SNFLLW
Sbjct: 152 QEILQACRAIAQKVQQGILHPDDISEEV-FERHLYTAGIADPDLLIRTSGEMRLSNFLLW 210
Query: 82 QTSNCSLYSPAALW 95
Q + +Y ALW
Sbjct: 211 QMAYGEIYITDALW 224
>gi|229507670|ref|ZP_04397175.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae BX 330286]
gi|229512135|ref|ZP_04401614.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae B33]
gi|229519270|ref|ZP_04408713.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC9]
gi|229607174|ref|YP_002877822.1| UDP pyrophosphate synthetase [Vibrio cholerae MJ-1236]
gi|255747048|ref|ZP_05420993.1| undecaprenyl pyrophosphate synthetase [Vibrio cholera CIRS 101]
gi|262161408|ref|ZP_06030518.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1]
gi|360036132|ref|YP_004937895.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742060|ref|YP_005334029.1| undecaprenyl pyrophosphate synthase [Vibrio cholerae IEC224]
gi|417818020|ref|ZP_12464649.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HCUF01]
gi|418335265|ref|ZP_12944176.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-06A1]
gi|418338874|ref|ZP_12947768.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-23A1]
gi|418346798|ref|ZP_12951556.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-28A1]
gi|418350560|ref|ZP_12955291.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-43A1]
gi|419827214|ref|ZP_14350713.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1033(6)]
gi|421318147|ref|ZP_15768715.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1032(5)]
gi|421322012|ref|ZP_15772565.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1038(11)]
gi|421325814|ref|ZP_15776338.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1041(14)]
gi|421333428|ref|ZP_15783905.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1046(19)]
gi|421336970|ref|ZP_15787431.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1048(21)]
gi|421340398|ref|ZP_15790830.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-20A2]
gi|421347937|ref|ZP_15798314.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-46A1]
gi|422897353|ref|ZP_16934797.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-40A1]
gi|422903551|ref|ZP_16938521.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-48A1]
gi|422907436|ref|ZP_16942234.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-70A1]
gi|422914280|ref|ZP_16948785.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HFU-02]
gi|422926484|ref|ZP_16959497.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-38A1]
gi|423145806|ref|ZP_17133400.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-19A1]
gi|423150482|ref|ZP_17137796.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-21A1]
gi|423154301|ref|ZP_17141482.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-22A1]
gi|423157384|ref|ZP_17144477.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-32A1]
gi|423160955|ref|ZP_17147895.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-33A2]
gi|423165782|ref|ZP_17152506.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-48B2]
gi|423731802|ref|ZP_17705105.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-17A1]
gi|423769087|ref|ZP_17713225.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-50A2]
gi|423895949|ref|ZP_17727428.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-62A1]
gi|423931481|ref|ZP_17731821.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-77A1]
gi|424003234|ref|ZP_17746309.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-17A2]
gi|424007025|ref|ZP_17749995.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-37A1]
gi|424025005|ref|ZP_17764655.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-62B1]
gi|424027891|ref|ZP_17767493.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-69A1]
gi|424587171|ref|ZP_18026749.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1030(3)]
gi|424595823|ref|ZP_18035142.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1040(13)]
gi|424599736|ref|ZP_18038914.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio Cholerae
CP1044(17)]
gi|424602497|ref|ZP_18041637.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1047(20)]
gi|424607430|ref|ZP_18046371.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1050(23)]
gi|424611248|ref|ZP_18050087.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-39A1]
gi|424614063|ref|ZP_18052848.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-41A1]
gi|424618037|ref|ZP_18056708.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-42A1]
gi|424622821|ref|ZP_18061326.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-47A1]
gi|424645784|ref|ZP_18083519.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-56A2]
gi|424653555|ref|ZP_18090935.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-57A2]
gi|440710495|ref|ZP_20891143.1| undecaprenyl diphosphate synthase [Vibrio cholerae 4260B]
gi|443504602|ref|ZP_21071558.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-64A1]
gi|443508503|ref|ZP_21075264.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-65A1]
gi|443512347|ref|ZP_21078982.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-67A1]
gi|443515901|ref|ZP_21082411.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-68A1]
gi|443519695|ref|ZP_21086088.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-71A1]
gi|443524586|ref|ZP_21090796.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-72A2]
gi|443532180|ref|ZP_21098194.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HC-7A1]
gi|443535988|ref|ZP_21101859.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-80A1]
gi|443539521|ref|ZP_21105375.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-81A1]
gi|42560015|sp|Q9KPV6.2|UPPS_VIBCH RecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase
((2E,6E)-farnesyl-diphosphate specific); AltName:
Full=Ditrans,polycis-undecaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS; AltName: Full=Undecaprenyl pyrophosphate
synthase; Short=UPP synthase
gi|229343959|gb|EEO08934.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae RC9]
gi|229352100|gb|EEO17041.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae B33]
gi|229355175|gb|EEO20096.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae BX 330286]
gi|229369829|gb|ACQ60252.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae MJ-1236]
gi|255735450|gb|EET90850.1| undecaprenyl pyrophosphate synthetase [Vibrio cholera CIRS 101]
gi|262028719|gb|EEY47373.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae INDRE 91/1]
gi|340037743|gb|EGQ98718.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HCUF01]
gi|341620491|gb|EGS46262.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-48A1]
gi|341620627|gb|EGS46394.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-70A1]
gi|341621236|gb|EGS46983.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-40A1]
gi|341636522|gb|EGS61217.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HFU-02]
gi|341645874|gb|EGS69998.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-38A1]
gi|356416641|gb|EHH70266.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-06A1]
gi|356417804|gb|EHH71417.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-21A1]
gi|356422644|gb|EHH76118.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-19A1]
gi|356427993|gb|EHH81224.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-22A1]
gi|356430516|gb|EHH83725.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-23A1]
gi|356431782|gb|EHH84982.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-28A1]
gi|356439274|gb|EHH92261.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-32A1]
gi|356444232|gb|EHH97044.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-33A2]
gi|356445056|gb|EHH97865.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-43A1]
gi|356450283|gb|EHI03013.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-48B2]
gi|356647286|gb|AET27341.1| undecaprenyl diphosphate synthase [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795570|gb|AFC59041.1| undecaprenyl pyrophosphate synthase [Vibrio cholerae IEC224]
gi|395916405|gb|EJH27235.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1032(5)]
gi|395917652|gb|EJH28480.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1041(14)]
gi|395919006|gb|EJH29830.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1038(11)]
gi|395928830|gb|EJH39583.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1046(19)]
gi|395932069|gb|EJH42813.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1048(21)]
gi|395939681|gb|EJH50363.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-20A2]
gi|395942516|gb|EJH53192.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-46A1]
gi|395958322|gb|EJH68818.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-56A2]
gi|395958732|gb|EJH69203.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-57A2]
gi|395961412|gb|EJH71740.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-42A1]
gi|395970360|gb|EJH80131.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-47A1]
gi|395972519|gb|EJH82109.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1030(3)]
gi|395975175|gb|EJH84672.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1047(20)]
gi|408006599|gb|EKG44737.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-39A1]
gi|408011823|gb|EKG49624.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-41A1]
gi|408031192|gb|EKG67829.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1040(13)]
gi|408041093|gb|EKG77233.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio Cholerae
CP1044(17)]
gi|408042421|gb|EKG78473.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1050(23)]
gi|408608004|gb|EKK81407.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1033(6)]
gi|408622845|gb|EKK95812.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-17A1]
gi|408633364|gb|EKL05725.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-50A2]
gi|408653708|gb|EKL24863.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-77A1]
gi|408654651|gb|EKL25786.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-62A1]
gi|408844879|gb|EKL85002.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-37A1]
gi|408845768|gb|EKL85883.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-17A2]
gi|408869846|gb|EKM09133.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-62B1]
gi|408878514|gb|EKM17515.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-69A1]
gi|439973824|gb|ELP50028.1| undecaprenyl diphosphate synthase [Vibrio cholerae 4260B]
gi|443431073|gb|ELS73627.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-64A1]
gi|443434911|gb|ELS81057.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-65A1]
gi|443438735|gb|ELS88453.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-67A1]
gi|443442838|gb|ELS96141.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-68A1]
gi|443446694|gb|ELT03353.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-71A1]
gi|443449444|gb|ELT09738.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-72A2]
gi|443457570|gb|ELT24967.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HC-7A1]
gi|443460878|gb|ELT31958.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-80A1]
gi|443465621|gb|ELT40281.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-81A1]
Length = 250
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 28 DKLDGSQALKEK----------IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
D L +QAL EK IDED K+ H+ MA PD D+ IR+SGE R SN
Sbjct: 144 DILQATQALAEKVTQGELQPSDIDEDVFKQ------HLTMADLPDVDLLIRTSGECRISN 197
Query: 78 FLLWQTSNCSLYSPAALWLE 97
F+LWQ + +Y W E
Sbjct: 198 FMLWQLAYAEMYFTPVFWPE 217
>gi|340709154|ref|XP_003393178.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Bombus
terrestris]
Length = 244
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 21 DVQEYCEDKLDGSQ---ALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
++ +D ++G Q L E IDE+ I ++ +P+PD+ IR+SGE R S+
Sbjct: 110 EITHAIKDVIEGVQNGDILSEDIDENLISNC------LYTNYSPNPDLLIRTSGEVRFSD 163
Query: 78 FLLWQTSNCSLYSPAALW 95
FL+WQ SN +Y LW
Sbjct: 164 FLMWQISNTCIYFTTVLW 181
>gi|408490922|ref|YP_006867291.1| undecaprenyl pyrophosphate synthetase UppS [Psychroflexus torquis
ATCC 700755]
gi|408468197|gb|AFU68541.1| undecaprenyl pyrophosphate synthetase UppS [Psychroflexus torquis
ATCC 700755]
Length = 245
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E IDE TI H++ PD D+ IR+SGE R SNFLLWQ + LY LW +
Sbjct: 165 ETIDESTINN------HLYTRNLPDVDMMIRTSGEQRISNFLLWQMAYAELYFTETLWPD 218
Query: 98 EKKKRQF 104
+K+ F
Sbjct: 219 FRKENLF 225
>gi|423062250|ref|ZP_17051040.1| undecaprenyl diphosphate synthase [Arthrospira platensis C1]
gi|406716158|gb|EKD11309.1| undecaprenyl diphosphate synthase [Arthrospira platensis C1]
Length = 226
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + T++ + +D EK+++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 125 EEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTSDPDLLIRTSGELRISNFLLWQ 184
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 185 IAYAEIYVTETLW 197
>gi|289524565|ref|ZP_06441419.1| di-trans,poly-cis-decaprenylcistransferase, partial [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502196|gb|EFD23360.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 144
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW--L 96
+IDED + H+++ PDPD+ IR+SGE R SNF LWQ+S LY LW
Sbjct: 67 EIDEDCFRG------HLYLPDVPDPDLIIRTSGEKRLSNFWLWQSSYSELYFTDCLWPEF 120
Query: 97 EEKKKRQ 103
+E K R+
Sbjct: 121 DEGKLRE 127
>gi|296132873|ref|YP_003640120.1| undecaprenyl diphosphate synthase [Thermincola potens JR]
gi|296031451|gb|ADG82219.1| undecaprenyl diphosphate synthase [Thermincola potens JR]
Length = 259
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 33 SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
+ LK ++D I + V V +H++ PDPD+ IR SGE R SNFLLWQ + L+
Sbjct: 173 GEVLKGRLDLKAIDEKV-VNEHLYTVGMPDPDLVIRPSGELRISNFLLWQMAYSELWYSP 231
Query: 93 ALW 95
LW
Sbjct: 232 VLW 234
>gi|418532383|ref|ZP_13098291.1| undecaprenyl diphosphate synthase [Comamonas testosteroni ATCC
11996]
gi|371450614|gb|EHN63658.1| undecaprenyl diphosphate synthase [Comamonas testosteroni ATCC
11996]
Length = 245
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++++ M +A PDPD+ IR+ GETR SNFLLWQ + L+ ALW
Sbjct: 161 NLDRAMALAHVPDPDLMIRTGGETRISNFLLWQAAYTELFFSNALW 206
>gi|237756527|ref|ZP_04585055.1| undecaprenyl pyrophosphate synthetase 1 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691313|gb|EEP60393.1| undecaprenyl pyrophosphate synthetase 1 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 231
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKIDE++ + ++++ PDPD+ IR+SGE R SNF+LWQ + LY LW
Sbjct: 155 EKIDEESFRN------YLYLPEIPDPDLLIRTSGEKRISNFILWQLAYTELYFTDVLW 206
>gi|30249676|ref|NP_841746.1| UDP pyrophosphate synthetase [Nitrosomonas europaea ATCC 19718]
gi|42559796|sp|Q82TZ9.1|ISPT_NITEU RecName: Full=Isoprenyl transferase
gi|30180713|emb|CAD85625.1| Undecaprenyl pyrophosphate synthetase family [Nitrosomonas europaea
ATCC 19718]
Length = 263
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 29 KLDGSQALKEKIDEDTIKKLV----DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
+ D QA+++ I E+ + D+ +H+ +A AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 148 RWDIMQAVRKMITENPDSAVTFDEPDIARHLALADAPEPDLFIRTGGECRISNFLLWQLA 207
Query: 85 NCSLYSPAALW 95
LY LW
Sbjct: 208 YTELYFTDTLW 218
>gi|264679363|ref|YP_003279270.1| undecaprenyl diphosphate synthase [Comamonas testosteroni CNB-2]
gi|262209876|gb|ACY33974.1| undecaprenyl diphosphate synthase [Comamonas testosteroni CNB-2]
Length = 245
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++++ M +A PDPD+ IR+ GETR SNFLLWQ + L+ ALW
Sbjct: 161 NLDRAMALAHVPDPDLMIRTGGETRISNFLLWQAAYTELFFSNALW 206
>gi|153823581|ref|ZP_01976248.1| undecaprenyl diphosphate synthase [Vibrio cholerae B33]
gi|417814283|ref|ZP_12460936.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-49A2]
gi|418355433|ref|ZP_12958152.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-61A1]
gi|421329472|ref|ZP_15779982.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1042(15)]
gi|424657374|ref|ZP_18094659.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-81A2]
gi|449055287|ref|ZP_21733955.1| Undecaprenyl diphosphate synthase [Vibrio cholerae O1 str. Inaba
G4222]
gi|126518897|gb|EAZ76120.1| undecaprenyl diphosphate synthase [Vibrio cholerae B33]
gi|340036769|gb|EGQ97745.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-49A2]
gi|356451931|gb|EHI04610.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-61A1]
gi|395928006|gb|EJH38769.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1042(15)]
gi|408052495|gb|EKG87534.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-81A2]
gi|448265329|gb|EMB02564.1| Undecaprenyl diphosphate synthase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 232
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 28 DKLDGSQALKEK----------IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
D L +QAL EK IDED K+ H+ MA PD D+ IR+SGE R SN
Sbjct: 126 DILQATQALAEKVTQGELQPSDIDEDVFKQ------HLTMADLPDVDLLIRTSGECRISN 179
Query: 78 FLLWQTSNCSLYSPAALWLE 97
F+LWQ + +Y W E
Sbjct: 180 FMLWQLAYAEMYFTPVFWPE 199
>gi|120434582|ref|YP_860274.1| UDP-pyrophosphate synthetase [Gramella forsetii KT0803]
gi|117576732|emb|CAL65201.1| undecaprenyl-pyrophosphate synthetase [Gramella forsetii KT0803]
Length = 246
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E++ ED I + V + +H++ PD D+ IR+SGE R SNFLLWQ + LY LW +
Sbjct: 160 EELSEDAIDESV-INEHLYTRNLPDVDLLIRTSGEQRISNFLLWQIAYAELYFTKILWPD 218
Query: 98 EKKKRQF 104
+++ F
Sbjct: 219 YRRENLF 225
>gi|299532322|ref|ZP_07045715.1| undecaprenyl diphosphate synthase [Comamonas testosteroni S44]
gi|298719730|gb|EFI60694.1| undecaprenyl diphosphate synthase [Comamonas testosteroni S44]
Length = 245
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++++ M +A PDPD+ IR+ GETR SNFLLWQ + L+ ALW
Sbjct: 161 NLDRAMALAHVPDPDLMIRTGGETRISNFLLWQAAYTELFFSNALW 206
>gi|220910055|ref|YP_002485366.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. PCC 7425]
gi|219866666|gb|ACL47005.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7425]
Length = 249
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE E+H++ A DPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 173 EDIDEGLF------ERHLYTAGMGDPDLLIRTSGEMRISNFLLWQLAYSELYVTETLW 224
>gi|158333613|ref|YP_001514785.1| undecaprenyl pyrophosphate synthase [Acaryochloris marina
MBIC11017]
gi|359459815|ref|ZP_09248378.1| undecaprenyl pyrophosphate synthase [Acaryochloris sp. CCMEE 5410]
gi|158303854|gb|ABW25471.1| undecaprenyl diphosphate synthase [Acaryochloris marina MBIC11017]
Length = 250
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+H++ A DPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 181 ERHLYTAGIIDPDLLIRTSGEMRVSNFLLWQMAYAELYVTKTLW 224
>gi|157364645|ref|YP_001471412.1| undecaprenyl diphosphate synthase [Thermotoga lettingae TMO]
gi|157315249|gb|ABV34348.1| undecaprenyl diphosphate synthase [Thermotoga lettingae TMO]
Length = 224
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D ++ +++ PDPD IR+SGE R SNFLLWQT+ LY LW
Sbjct: 154 DFKQFLYLPDVPDPDFVIRTSGEIRISNFLLWQTAYSELYFTKTLW 199
>gi|221066089|ref|ZP_03542194.1| undecaprenyl diphosphate synthase [Comamonas testosteroni KF-1]
gi|220711112|gb|EED66480.1| undecaprenyl diphosphate synthase [Comamonas testosteroni KF-1]
Length = 245
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++++ M +A PDPD+ IR+ GETR SNFLLWQ + L+ ALW
Sbjct: 161 NLDRAMALAHVPDPDLMIRTGGETRISNFLLWQAAYTELFFSNALW 206
>gi|383758588|ref|YP_005437573.1| undecaprenyl pyrophosphate synthetase UppS [Rubrivivax gelatinosus
IL144]
gi|381379257|dbj|BAL96074.1| undecaprenyl pyrophosphate synthetase UppS [Rubrivivax gelatinosus
IL144]
Length = 256
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 21 DVQEYCEDKL-DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
DV + C L DG + E DE + +HM ++ APDPD+ IR+ GE R SNFL
Sbjct: 154 DVVQACRQALADGVK--PEDFDESYL------SRHMALSFAPDPDLFIRTGGEMRMSNFL 205
Query: 80 LWQTSNCSLYSPAALW 95
LWQ + L+ LW
Sbjct: 206 LWQAAYSELFFTECLW 221
>gi|407275880|ref|ZP_11104350.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus sp. P14]
Length = 255
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 31 DGSQAL-----KEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
D QAL +E +D + + + V VE H++ + PDPD+ IR+SGE R S FLLWQ
Sbjct: 159 DAVQALLRAKQREGLDGEGLVEAVTVEAISDHLYTSGQPDPDLVIRTSGEQRLSGFLLWQ 218
Query: 83 TSNCSLYSPAALWLEEKK 100
++ ++ A W E ++
Sbjct: 219 SAYSEIWFTEAYWPEFRR 236
>gi|455649896|gb|EMF28686.1| undecaprenyl diphosphate synthase [Streptomyces gancidicus BKS
13-15]
Length = 257
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
DK + L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AHDKGVAMEELAESVDVDMIGR------HLYTKAQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCEVFW 233
>gi|452961162|gb|EME66469.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus ruber BKS
20-38]
Length = 255
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 31 DGSQAL-----KEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
D QAL +E +D + + + V VE H++ + PDPD+ IR+SGE R S FLLWQ
Sbjct: 159 DAVQALLRAKQREGLDGEGLVEAVTVEAISDHLYTSGQPDPDLVIRTSGEQRLSGFLLWQ 218
Query: 83 TSNCSLYSPAALWLEEKK 100
++ ++ A W E ++
Sbjct: 219 SAYSEIWFTEAYWPEFRR 236
>gi|229493884|ref|ZP_04387656.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
gi|453067169|ref|ZP_21970458.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
qingshengii BKS 20-40]
gi|226186859|dbj|BAH34963.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
erythropolis PR4]
gi|229319161|gb|EEN85010.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
erythropolis SK121]
gi|452767337|gb|EME25578.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
qingshengii BKS 20-40]
Length = 255
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
VQ DK+ + E I T+ ++ H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 161 VQSLLRDKIGAGLSGDELIQAVTVDG---IDGHLYTSGQPDPDLVIRTSGEQRLSGFLLW 217
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ ++ A W E ++
Sbjct: 218 QSAYSEIWFTEAYWPEFRR 236
>gi|376001882|ref|ZP_09779736.1| undecaprenyl pyrophosphate synthase [Arthrospira sp. PCC 8005]
gi|375329793|emb|CCE15489.1| undecaprenyl pyrophosphate synthase [Arthrospira sp. PCC 8005]
Length = 253
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 14 SLILPVPDVQEYCEDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRS 69
++L V E+ + QA+ ++ + T++ + +D EK+++ A DPD+ IR+
Sbjct: 139 GILLTVATNYGGREEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTSDPDLLIRT 198
Query: 70 SGETRPSNFLLWQTSNCSLYSPAALW 95
SGE R SNFLLWQ + +Y LW
Sbjct: 199 SGELRISNFLLWQIAYAEIYVTDTLW 224
>gi|297793607|ref|XP_002864688.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297310523|gb|EFH40947.1| undecaprenyl pyrophosphate synthetase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 272
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 37 KEKIDEDTIK-KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
K KI + ++ +L D+E+ M+ +V P PD+ IR+ G R SNF+ WQTS L+ ALW
Sbjct: 184 KSKIGDGSVALELSDIEECMYTSVVPVPDLVIRTGGGDRLSNFMTWQTSKSLLHRTEALW 243
>gi|186682351|ref|YP_001865547.1| undecaprenyl pyrophosphate synthase [Nostoc punctiforme PCC 73102]
gi|186464803|gb|ACC80604.1| undecaprenyl diphosphate synthase [Nostoc punctiforme PCC 73102]
Length = 236
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
VE+H++ A P+PD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 161 VEQHLYTADTPEPDLLIRTSGEMRLSNFLLWQMAYTEMYFTDILW 205
>gi|440696525|ref|ZP_20878986.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
turgidiscabies Car8]
gi|440281220|gb|ELP68868.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
turgidiscabies Car8]
Length = 258
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
DK + L E +D D I K H++ + PDPD+ IR+SGE R S F+LWQT++
Sbjct: 171 AHDKGTSLEELAESVDVDMIGK------HLYTSDQPDPDLVIRTSGEQRLSGFMLWQTAH 224
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 225 SEYYFCEVFW 234
>gi|333897128|ref|YP_004471002.1| UDP pyrophosphate synthase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112393|gb|AEF17330.1| Undecaprenyl pyrophosphate synthase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 253
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
K+ GS L KID + I + V + +++ + PDPD+ IR SGE R SNF+LWQ++ L
Sbjct: 163 KMIGSSLLSGKIDLNDIDENV-IADNLYTSGQPDPDLIIRPSGELRISNFMLWQSAYSEL 221
Query: 89 YSPAALWLEEKKK 101
+ LW + +KK
Sbjct: 222 WFSDVLWPDFEKK 234
>gi|385791105|ref|YP_005822228.1| di-trans,poly-cis-decaprenylcistransferase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302326429|gb|ADL25630.1| di-trans,poly-cis-decaprenylcistransferase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 236
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KH+++ APDPD+ IR+ GE R SN+LLWQ + Y LW
Sbjct: 166 KHLYLKGAPDPDLIIRTGGEFRLSNYLLWQAAYSEFYVTNTLW 208
>gi|282856756|ref|ZP_06266017.1| di-trans,poly-cis-decaprenylcistransferase [Pyramidobacter
piscolens W5455]
gi|282585379|gb|EFB90686.1| di-trans,poly-cis-decaprenylcistransferase [Pyramidobacter
piscolens W5455]
Length = 233
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 41 DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +TI D+ KH+++ PDPD+ IR+SGE R SNF LWQ S Y LW
Sbjct: 151 NGETISSEEDLRKHLYLPDVPDPDLIIRTSGELRISNFWLWQGSYSEYYFTDTLW 205
>gi|188586059|ref|YP_001917604.1| Undecaprenyl pyrophosphate synthetase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350746|gb|ACB85016.1| Undecaprenyl pyrophosphate synthetase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 247
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
++A +ID TI + + + +H++ PDPD+ IRSSGE R SNFLLWQ + L+ P
Sbjct: 158 AAKASDREIDPKTISEDI-ISQHLYNPEIPDPDLMIRSSGEQRLSNFLLWQLAYSELWFP 216
Query: 92 AALW 95
W
Sbjct: 217 EVYW 220
>gi|406956866|gb|EKD84899.1| Undecaprenyl diphosphate synthase [uncultured bacterium]
Length = 232
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+KE I+ I + + VE+H++ DP++ IR+ G +R SNFLLWQT+ Y LW
Sbjct: 150 VKEGIEVKKINETI-VERHLYTNGQNDPELVIRTGGRSRLSNFLLWQTAYSEFYFTTTLW 208
>gi|116622347|ref|YP_824503.1| undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
gi|116225509|gb|ABJ84218.1| Undecaprenyl pyrophosphate synthetase [Candidatus Solibacter
usitatus Ellin6076]
Length = 279
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
K+DED I ++ A PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 181 KMDEDLIAT------SLYTASCPDPDLLIRTSGEMRISNFLLWQIAYAELYVTETLW 231
>gi|428210344|ref|YP_007094697.1| undecaprenyl pyrophosphate synthetase [Chroococcidiopsis thermalis
PCC 7203]
gi|428012265|gb|AFY90828.1| Undecaprenyl pyrophosphate synthetase [Chroococcidiopsis thermalis
PCC 7203]
Length = 248
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+H++ A DPD+ IR+SGE R SNFLLWQ + +Y +LW
Sbjct: 180 ERHLYTAGISDPDLLIRTSGEMRISNFLLWQMAYAEIYITESLW 223
>gi|443624571|ref|ZP_21109041.1| putative Undecaprenyl pyrophosphate synthetase 1 [Streptomyces
viridochromogenes Tue57]
gi|443342016|gb|ELS56188.1| putative Undecaprenyl pyrophosphate synthetase 1 [Streptomyces
viridochromogenes Tue57]
Length = 257
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
++K + L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AQEKGTSMEELAEAVDIDMIGR------HLYTGAQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCEVFW 233
>gi|297625078|ref|YP_003706512.1| undecaprenyl diphosphate synthase [Truepera radiovictrix DSM 17093]
gi|297166258|gb|ADI15969.1| undecaprenyl diphosphate synthase [Truepera radiovictrix DSM 17093]
Length = 310
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E++ DTI + H++ A PDPD IR+SGE R S FLLWQ + Y A W
Sbjct: 233 LAERVSADTIGQ------HLYTAGVPDPDFIIRTSGEVRLSGFLLWQAAYSEYYFCDAFW 286
Query: 96 LEEKK 100
+K
Sbjct: 287 PSFRK 291
>gi|334337912|ref|YP_004543064.1| UDP pyrophosphate synthase [Isoptericola variabilis 225]
gi|334108280|gb|AEG45170.1| Undecaprenyl pyrophosphate synthase [Isoptericola variabilis 225]
Length = 253
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 6 DVQPLKINSLIL-----PVPD-VQEYCEDKLDGSQALKE---KIDEDTIKKLVDVEKHMF 56
DV L++N I + D V+ Y + G L+E +ID D D+ H++
Sbjct: 137 DVDGLQVNVAIGYGGRHEIADAVRSYLRQEAAGGATLEELAERIDVD------DIAAHLY 190
Query: 57 MAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
PDP++ IR+SGE R FL+WQ+++ LY A W
Sbjct: 191 TKGQPDPELVIRTSGELRVGGFLMWQSAHSELYFCEAYW 229
>gi|315918328|ref|ZP_07914568.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
gi|317059746|ref|ZP_07924231.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|313685422|gb|EFS22257.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 3_1_5R]
gi|313692203|gb|EFS29038.1| undecaprenyl pyrophosphate synthetase [Fusobacterium gonidiaformans
ATCC 25563]
Length = 230
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
Q KEKI E+ D+ H++ + PDP++ IR+SGE R SNFLLWQ + +Y
Sbjct: 148 QEKKEKISEE------DISSHLYQNI-PDPELIIRTSGEFRISNFLLWQLAYAEIYVTDT 200
Query: 94 LW 95
LW
Sbjct: 201 LW 202
>gi|428203904|ref|YP_007082493.1| undecaprenyl diphosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427981336|gb|AFY78936.1| undecaprenyl diphosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 249
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
ID + I + + VE+H++ P PD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 170 IDPEAIDEAL-VERHLYTCGLPSPDLLIRTSGEMRISNFLLWQMAYAEIYVTQTLW 224
>gi|406836154|ref|ZP_11095748.1| undecaprenyl diphosphate synthase [Schlesneria paludicola DSM
18645]
Length = 259
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 31 DGSQALKE-----KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
D +QA+ ++D D I + +E H++ A PDPD+ IR++GE R SN+LLWQ S
Sbjct: 164 DAAQAIAREVAAGRLDPDAINEST-IEAHLYTAGMPDPDLVIRTAGEMRVSNYLLWQISY 222
Query: 86 CSLYSPAALW 95
L+ W
Sbjct: 223 AELWVTEKCW 232
>gi|404214219|ref|YP_006668413.1| Undecaprenyl pyrophosphate synthase [Gordonia sp. KTR9]
gi|403645018|gb|AFR48258.1| Undecaprenyl pyrophosphate synthase [Gordonia sp. KTR9]
Length = 260
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ E+K+ + E +D T++ ++ +++ PDPD+ IR+SGE R S F
Sbjct: 163 VDAVQALLEEKVTAGASAAEMVDAVTVEA---IDANLYTKGQPDPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|261416242|ref|YP_003249925.1| undecaprenyl diphosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372698|gb|ACX75443.1| undecaprenyl diphosphate synthase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 236
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KH+++ APDPD+ IR+ GE R SN+LLWQ + Y LW
Sbjct: 166 KHLYLKGAPDPDLIIRTGGEFRLSNYLLWQAAYSEFYVTNTLW 208
>gi|117929088|ref|YP_873639.1| undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
gi|117649551|gb|ABK53653.1| Undecaprenyl pyrophosphate synthetase [Acidothermus cellulolyticus
11B]
Length = 279
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 2 HKSDDVQPLKINSLILPVPDVQEYCE--DKLDGSQALKEKIDEDTIKKLVDVE---KHMF 56
H + DV L +N + + +E + L A++ ED + ++DVE +H++
Sbjct: 159 HATQDVDGLLVN-VAVGYGGRREIADAVRALLHEHAIRGTSIED-LANVLDVEHIARHLY 216
Query: 57 MAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
PDPD+ IR+SGE R S FLLWQ+++ L+ ALW
Sbjct: 217 TKGQPDPDLVIRTSGEQRLSGFLLWQSAHSELFFCEALW 255
>gi|317508404|ref|ZP_07966074.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316253251|gb|EFV12651.1| di-trans,poly-cis-decaprenylcistransferase [Segniliparus rugosus
ATCC BAA-974]
Length = 264
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+ D+L A +E +D + + +H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 170 VRSLVADRLASGLAGQELVDSIDVAA---IGEHLYTSGQPDPDLVIRTSGEQRLSGFLLW 226
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q+ + ++ A W E ++
Sbjct: 227 QSVHSEIWFTEAFWPEFRR 245
>gi|22299306|ref|NP_682553.1| undecaprenyl pyrophosphate synthase [Thermosynechococcus elongatus
BP-1]
gi|42559974|sp|Q8DI29.1|ISPT_THEEB RecName: Full=Isoprenyl transferase
gi|22295489|dbj|BAC09315.1| undecaprenyl pyrophosphate synthetase [Thermosynechococcus
elongatus BP-1]
Length = 251
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V E+H++ PDPD+ IR+SGE R SNF LWQ + +Y LW
Sbjct: 180 VLFERHLYTGGLPDPDLLIRTSGELRISNFFLWQVAYAEIYVTKTLW 226
>gi|300789889|ref|YP_003770180.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
gi|384153405|ref|YP_005536221.1| undecaprenyl pyrophosphate synthase [Amycolatopsis mediterranei
S699]
gi|399541769|ref|YP_006554431.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
S699]
gi|299799403|gb|ADJ49778.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
U32]
gi|340531559|gb|AEK46764.1| undecaprenyl pyrophosphate synthase [Amycolatopsis mediterranei
S699]
gi|398322539|gb|AFO81486.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis mediterranei
S699]
Length = 252
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L++ DE T + K++DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 162 LRQHADEGTSIHELAKILDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 221
Query: 89 YSPAALW 95
+ A W
Sbjct: 222 WFTEAYW 228
>gi|434403227|ref|YP_007146112.1| Undecaprenyl pyrophosphate synthetase [Cylindrospermum stagnale PCC
7417]
gi|428257482|gb|AFZ23432.1| Undecaprenyl pyrophosphate synthetase [Cylindrospermum stagnale PCC
7417]
Length = 249
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 27 EDKLDGSQALKEKIDE-----DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ L +A+ EK+ + D I + V E+H++ A DPD+ IR+SGE R SNFLLW
Sbjct: 152 QEILQACRAIAEKVQQGLLKPDEISEEV-FERHLYTAGITDPDLLIRTSGEMRLSNFLLW 210
Query: 82 QTSNCSLYSPAALW 95
Q + +Y LW
Sbjct: 211 QMAYGEIYITDTLW 224
>gi|428215358|ref|YP_007088502.1| undecaprenyl pyrophosphate synthetase [Oscillatoria acuminata PCC
6304]
gi|428003739|gb|AFY84582.1| Undecaprenyl pyrophosphate synthetase [Oscillatoria acuminata PCC
6304]
Length = 249
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE E+H++ + DPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 173 EQIDEALF------ERHLYTSEVGDPDLLIRTSGEMRLSNFLLWQVAYSELYVTETLW 224
>gi|186686028|ref|YP_001869224.1| undecaprenyl pyrophosphate synthase [Nostoc punctiforme PCC 73102]
gi|186468480|gb|ACC84281.1| undecaprenyl diphosphate synthase [Nostoc punctiforme PCC 73102]
Length = 249
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 27 EDKLDGSQALKEKIDE-----DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ L QA+ +++ + D I + V E H++ A DPD+ IR+SGE R SNFLLW
Sbjct: 152 QEILQACQAIAKQVQQGLLQPDEINEQV-FESHLYTAGITDPDLLIRTSGEMRLSNFLLW 210
Query: 82 QTSNCSLYSPAALW 95
Q + +Y ALW
Sbjct: 211 QMAYGEIYITDALW 224
>gi|261378086|ref|ZP_05982659.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria cinerea ATCC
14685]
gi|269145535|gb|EEZ71953.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria cinerea ATCC
14685]
Length = 248
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K ++ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------YLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|416199940|ref|ZP_11619525.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
961-5945]
gi|421549747|ref|ZP_15995757.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
69166]
gi|433470452|ref|ZP_20427852.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
68094]
gi|433476765|ref|ZP_20434093.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
70012]
gi|433537949|ref|ZP_20494436.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
70030]
gi|325143200|gb|EGC65540.1| undecaprenyl diphosphate synthetase [Neisseria meningitidis
961-5945]
gi|402331698|gb|EJU67030.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
69166]
gi|432211885|gb|ELK67829.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
68094]
gi|432217918|gb|ELK73783.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
70012]
gi|432276089|gb|ELL31151.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
70030]
Length = 248
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K ++ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------YLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|421564539|ref|ZP_16010338.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3081]
gi|433535787|ref|ZP_20492307.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
77221]
gi|402346136|gb|EJU81240.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
NM3081]
gi|432276798|gb|ELL31853.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
77221]
Length = 248
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K ++ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------YLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|332527874|ref|ZP_08403911.1| undecaprenyl pyrophosphate synthetase [Rubrivivax benzoatilyticus
JA2]
gi|332112451|gb|EGJ12244.1| undecaprenyl pyrophosphate synthetase [Rubrivivax benzoatilyticus
JA2]
Length = 256
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 21 DVQEYCEDKL-DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
DV + C + DG + E DE + + HM ++ APDPD+ IR+ GE R SNFL
Sbjct: 154 DVVQACRQAMADGIR--PEDFDESYLSR------HMALSFAPDPDLFIRTGGEMRMSNFL 205
Query: 80 LWQTSNCSLYSPAALW 95
LWQ + L+ LW
Sbjct: 206 LWQAAYSELFFTECLW 221
>gi|383830458|ref|ZP_09985547.1| undecaprenyl diphosphate synthase [Saccharomonospora xinjiangensis
XJ-54]
gi|383463111|gb|EID55201.1| undecaprenyl diphosphate synthase [Saccharomonospora xinjiangensis
XJ-54]
Length = 259
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L++ DE T + K++DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 169 LRQHADEGTTIHELAKILDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 228
Query: 89 YSPAALW 95
+ A W
Sbjct: 229 WFTEAYW 235
>gi|227494767|ref|ZP_03925083.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
gi|226831767|gb|EEH64150.1| undecaprenyl pyrophosphate synthetase [Actinomyces coleocanis DSM
15436]
Length = 263
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H++ A PDPD+ IR+SGE R S F+LWQ+ + Y A W
Sbjct: 194 DISEHLYTAGVPDPDLLIRTSGEQRLSGFMLWQSVHSEFYFCEAFW 239
>gi|15239358|ref|NP_200859.1| dehydrodolichyl diphosphate synthase 8 [Arabidopsis thaliana]
gi|93117611|sp|Q8LAR7.2|DDPS8_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 8;
Short=Dedol-PP synthase 8
gi|332009955|gb|AED97338.1| dehydrodolichyl diphosphate synthase 8 [Arabidopsis thaliana]
Length = 272
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
DGS AL+ L D+E+ M+ +V P PD+ +R+ G R SNF+ WQTS L+
Sbjct: 189 DGSSALE----------LSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHR 238
Query: 91 PAALW 95
ALW
Sbjct: 239 TEALW 243
>gi|218767121|ref|YP_002341633.1| UDP diphosphate synthase [Neisseria meningitidis Z2491]
gi|433479003|ref|ZP_20436302.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
63041]
gi|433518966|ref|ZP_20475693.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
65014]
gi|433540121|ref|ZP_20496578.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
63006]
gi|42559883|sp|Q9JX35.1|ISPT_NEIMA RecName: Full=Isoprenyl transferase
gi|121051129|emb|CAM07400.1| putative undecaprenyl diphosphate synthase [Neisseria meningitidis
Z2491]
gi|432218977|gb|ELK74829.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
63041]
gi|432256931|gb|ELL12242.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
65014]
gi|432278102|gb|ELL33146.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
63006]
Length = 248
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K ++ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------YLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|72160860|ref|YP_288517.1| undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
gi|123747270|sp|Q47SS3.1|ZFPP_THEFY RecName: Full=(2Z,6E)-farnesyl diphosphate synthase; AltName:
Full=Cis-prenyltransferase; AltName: Full=Short-chain
Z-isoprenyl diphosphate synthase; AltName: Full=Z-FPP
synthase; Short=Z-FPPS; AltName: Full=Z-Polyprenyl
diphosphate synthase; AltName: Full=Z-isoprenyl
diphosphate synthase
gi|71914592|gb|AAZ54494.1| Undecaprenyl pyrophosphate synthetase [Thermobifida fusca YX]
Length = 254
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
+ L E++D D D+ KH++ PDPD+ IR+SGE R S FLLWQ+++ Y
Sbjct: 175 EELAERLDLD------DIAKHLYTRGQPDPDLLIRTSGEQRLSGFLLWQSAHSEFYFCEV 228
Query: 94 LW 95
W
Sbjct: 229 FW 230
>gi|296313407|ref|ZP_06863348.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria polysaccharea
ATCC 43768]
gi|296840118|gb|EFH24056.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria polysaccharea
ATCC 43768]
Length = 248
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I EDT+ K ++ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 162 EITEDTLAK------YLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|167563184|ref|ZP_02356100.1| undecaprenyl diphosphate synthase [Burkholderia oklahomensis EO147]
Length = 260
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 169 EIDEDAFGR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTELYFTDKFW 219
>gi|433520975|ref|ZP_20477677.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
61103]
gi|432262759|gb|ELL17994.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
61103]
Length = 248
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 5 DDVQPLKINSLILPVPDVQEYCE--DKLDGSQALKEK----IDEDTIKKLVDVEKHMFMA 58
++ + L N+ L + +Y D L + L K I EDT+ K ++ +
Sbjct: 122 EEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAKGVSEITEDTLAK------YLMLG 175
Query: 59 VAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 176 DAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|9757753|dbj|BAB08234.1| undecaprenyl pyrophosphate synthetase-like protein [Arabidopsis
thaliana]
Length = 251
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
DGS AL+ L D+E+ M+ +V P PD+ +R+ G R SNF+ WQTS L+
Sbjct: 168 DGSSALE----------LSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHR 217
Query: 91 PAALW 95
ALW
Sbjct: 218 TEALW 222
>gi|291515265|emb|CBK64475.1| Undecaprenyl pyrophosphate synthetase [Alistipes shahii WAL 8301]
Length = 237
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
+++ Q +I E+TI ++ A P+PD+ +R+SGE R SNFLLWQ S L
Sbjct: 151 RVEAGQIAPSEISEETISTA------LYTAPYPNPDLIVRTSGEQRLSNFLLWQASYAEL 204
Query: 89 YSPAALW 95
+ P LW
Sbjct: 205 WFPEVLW 211
>gi|297538507|ref|YP_003674276.1| undecaprenyl diphosphate synthase [Methylotenera versatilis 301]
gi|297257854|gb|ADI29699.1| undecaprenyl diphosphate synthase [Methylotenera versatilis 301]
Length = 252
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ M+ AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 177 HLSMSYAPEPDLFIRTGGETRISNFLLWQLAYTELYFTDTLW 218
>gi|282858896|ref|ZP_06268036.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bivia
JCVIHMP010]
gi|282588278|gb|EFB93443.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella bivia
JCVIHMP010]
Length = 291
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+KE I EDTI KH+ A P+PD+ IR+ GE R SN+LLWQ + LY W
Sbjct: 204 IKEYITEDTI------SKHLTTAFMPEPDLLIRTGGELRISNYLLWQIAYSELYFCDTFW 257
>gi|257065046|ref|YP_003144718.1| Undecaprenyl pyrophosphate synthetase [Slackia heliotrinireducens
DSM 20476]
gi|256792699|gb|ACV23369.1| Undecaprenyl pyrophosphate synthetase [Slackia heliotrinireducens
DSM 20476]
Length = 259
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ KH++++ PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 189 LSKHLYVSGIPDPDLLIRTSGEMRLSNFLLWQIAYSEFYCTDTLW 233
>gi|320100343|ref|YP_004175935.1| undecaprenyl pyrophosphate synthetase [Desulfurococcus mucosus DSM
2162]
gi|319752695|gb|ADV64453.1| Undecaprenyl pyrophosphate synthetase [Desulfurococcus mucosus DSM
2162]
Length = 280
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
K+++ + APDPD+ IR+SGE R SNFLLWQ++ LY W E +K
Sbjct: 214 KYLYTSEAPDPDLIIRTSGEERISNFLLWQSAYSELYFCDVYWPEFRK 261
>gi|414079448|ref|YP_007000872.1| undecaprenyl pyrophosphate synthetase [Anabaena sp. 90]
gi|413972727|gb|AFW96815.1| undecaprenyl pyrophosphate synthetase [Anabaena sp. 90]
Length = 249
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 27 EDKLDGSQALKEKIDEDTIKKLVDV-----EKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ L +A+ +K+ ED ++ D+ E H++ A DPD+ IR+SGE R SNFLLW
Sbjct: 152 QEILQACRAIAQKVKEDLLQP-EDISEEVFEAHLYTAGIADPDLLIRTSGEMRLSNFLLW 210
Query: 82 QTSNCSLYSPAALW 95
Q + +Y LW
Sbjct: 211 QMAYSEIYISDTLW 224
>gi|404406409|ref|ZP_10997993.1| undecaprenyl pyrophosphate synthetase [Alistipes sp. JC136]
Length = 237
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
+++ + +I EDT+ +D + P+PD+ +R+SGE R SNFLLWQ S L
Sbjct: 151 RVEAGEIAPAEISEDTVSAALDTAPY------PNPDLIVRTSGEQRLSNFLLWQASYAEL 204
Query: 89 YSPAALW 95
+ P LW
Sbjct: 205 WFPEVLW 211
>gi|421556175|ref|ZP_16002092.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
80179]
gi|402338028|gb|EJU73267.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria meningitidis
80179]
Length = 248
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 5 DDVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVD-VEKHMFMAVAPDP 63
++ + L N+ L + +Y + D QA + I E + D + K++ + AP+P
Sbjct: 122 EEAEALTANNTGLTLSIAADYG-GRWDILQAANKLIAEGVSEITEDALAKYLMLGDAPEP 180
Query: 64 DITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 181 DLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|425469852|ref|ZP_18848756.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9701]
gi|389880282|emb|CCI38963.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9701]
Length = 249
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + I + +D E++++ A P+PD+ IRSSGE R SNFLLWQ
Sbjct: 152 EEIVQACQAIARQVQQGLISPEAIDESLFEQYLYTAGIPNPDLLIRSSGEMRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYVTDTLW 224
>gi|424899974|ref|ZP_18323516.1| undecaprenyl diphosphate synthase [Prevotella bivia DSM 20514]
gi|388592174|gb|EIM32413.1| undecaprenyl diphosphate synthase [Prevotella bivia DSM 20514]
Length = 246
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+KE I EDTI K H+ A P+PD+ IR+ GE R SN+LLWQ + LY W
Sbjct: 159 IKEYITEDTISK------HLTTAFMPEPDLLIRTGGELRISNYLLWQIAYSELYFCDTFW 212
>gi|119487024|ref|ZP_01620896.1| undecaprenyl pyrophosphate synthetase [Lyngbya sp. PCC 8106]
gi|119455953|gb|EAW37087.1| undecaprenyl pyrophosphate synthetase [Lyngbya sp. PCC 8106]
Length = 249
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
SQ + +++ D I +++ EKH++ A PD+ IR+SGE R SNFLLWQ + +Y
Sbjct: 162 ASQVQQGQLNPDEINEVL-FEKHLYTAGLSHPDLLIRTSGEMRISNFLLWQMAYAEIYVT 220
Query: 92 AALW 95
LW
Sbjct: 221 DTLW 224
>gi|296140818|ref|YP_003648061.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
gi|296028952|gb|ADG79722.1| undecaprenyl diphosphate synthase [Tsukamurella paurometabola DSM
20162]
Length = 281
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V ++KL + +E D T++ +++H++ + PDPD+ IR+SGE R S F
Sbjct: 184 VDAVHSLLDEKLREGASAEELADAVTVE---GIDQHLYTSGQPDPDLVIRTSGEQRLSGF 240
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 241 LLWQSAYSEIWFTEAYWPEFRR 262
>gi|312136819|ref|YP_004004156.1| undecaprenyl pyrophosphate synthetase [Methanothermus fervidus DSM
2088]
gi|311224538|gb|ADP77394.1| Undecaprenyl pyrophosphate synthetase [Methanothermus fervidus DSM
2088]
Length = 255
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
V+KH++ A DP + IR+SGE R S FLLWQ+S LY +LW E +K
Sbjct: 187 VDKHLYTAEVEDPQLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPEFRK 236
>gi|319638836|ref|ZP_07993594.1| undecaprenyl pyrophosphate synthetase [Neisseria mucosa C102]
gi|317399740|gb|EFV80403.1| undecaprenyl pyrophosphate synthetase [Neisseria mucosa C102]
Length = 248
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 33 SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
+Q + E + E T + L +++ + AP+PD+ IR+ GETR SNFLLWQ + LY
Sbjct: 153 NQLIAEGVTEITEEAL---SRYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTD 209
Query: 93 ALW 95
LW
Sbjct: 210 TLW 212
>gi|94310381|ref|YP_583591.1| undecaprenyl pyrophosphate synthase [Cupriavidus metallidurans
CH34]
gi|93354233|gb|ABF08322.1| undecaprenyl pyrophosphate synthase [Cupriavidus metallidurans
CH34]
Length = 256
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+D D I + V + H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 164 LDSDAIDESV-LAPHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTELYFTETFW 218
>gi|241760632|ref|ZP_04758724.1| undecaprenyl pyrophosphate synthetase 1 [Neisseria flavescens
SK114]
gi|241318813|gb|EER55339.1| undecaprenyl pyrophosphate synthetase 1 [Neisseria flavescens
SK114]
Length = 248
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 33 SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
+Q + E + E T + L +++ + AP+PD+ IR+ GETR SNFLLWQ + LY
Sbjct: 153 NQLIAEGVTEITEEAL---SRYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTD 209
Query: 93 ALW 95
LW
Sbjct: 210 TLW 212
>gi|225077040|ref|ZP_03720239.1| hypothetical protein NEIFLAOT_02092 [Neisseria flavescens
NRL30031/H210]
gi|224951597|gb|EEG32806.1| hypothetical protein NEIFLAOT_02092 [Neisseria flavescens
NRL30031/H210]
Length = 248
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 33 SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
+Q + E + E T + L +++ + AP+PD+ IR+ GETR SNFLLWQ + LY
Sbjct: 153 NQLIAEGVTEITEEAL---SRYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTD 209
Query: 93 ALW 95
LW
Sbjct: 210 TLW 212
>gi|269957412|ref|YP_003327201.1| UDP diphosphate synthase [Xylanimonas cellulosilytica DSM 15894]
gi|269306093|gb|ACZ31643.1| undecaprenyl diphosphate synthase [Xylanimonas cellulosilytica DSM
15894]
Length = 253
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E ID D D+ H++ A PDP++ IR+SGE R FL+WQ+++ LY A W
Sbjct: 176 LAETIDVD------DIADHLYTAGQPDPELVIRTSGEQRIGGFLMWQSAHSELYFCEAYW 229
>gi|187251115|ref|YP_001875597.1| undecaprenyl diphosphate synthase [Elusimicrobium minutum Pei191]
gi|186971275|gb|ACC98260.1| Undecaprenyl diphosphate synthase [Elusimicrobium minutum Pei191]
Length = 228
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 43 DTIKKLV----------DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
D IKKLV D+ M+ PDPD+ IR+SGE R SNFLLWQ++ Y
Sbjct: 141 DAIKKLVSQGKKEITEQDISACMYQPGIPDPDLIIRTSGEKRISNFLLWQSAYSEFYFTP 200
Query: 93 ALW 95
LW
Sbjct: 201 VLW 203
>gi|46445955|ref|YP_007320.1| undecaprenyl pyrophosphate synthetase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399596|emb|CAF23045.1| probable undecaprenyl pyrophosphate synthetase [Candidatus
Protochlamydia amoebophila UWE25]
Length = 258
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
D+++ KE+++E TI + +D + PDP++ IR+SGE R SNFLLWQ S
Sbjct: 172 DEVEQGNLKKEEVNETTIAQYLDTHQW------PDPELLIRTSGEMRISNFLLWQISYTE 225
Query: 88 LYSPAALW 95
+Y LW
Sbjct: 226 IYIAPVLW 233
>gi|430810563|ref|ZP_19437675.1| undecaprenyl pyrophosphate synthetase [Cupriavidus sp. HMR-1]
gi|429496971|gb|EKZ95528.1| undecaprenyl pyrophosphate synthetase [Cupriavidus sp. HMR-1]
Length = 256
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+D D I + V + H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 164 LDSDAIDESV-LAPHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTELYFTETFW 218
>gi|21593244|gb|AAM65193.1| undecaprenyl diphosphate synthase [Arabidopsis thaliana]
Length = 272
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
DGS AL+ L D+E+ M+ +V P PD+ +R+ G R SNF+ WQTS L+
Sbjct: 189 DGSSALE----------LSDIEECMYTSVVPVPDLMVRTGGGDRLSNFMTWQTSRALLHR 238
Query: 91 PAALW 95
ALW
Sbjct: 239 TEALW 243
>gi|456063590|ref|YP_007502560.1| Undecaprenyl diphosphate synthase [beta proteobacterium CB]
gi|455440887|gb|AGG33825.1| Undecaprenyl diphosphate synthase [beta proteobacterium CB]
Length = 257
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 175 LQAHLSMAYAPEPDLFIRTGGEQRVSNFLLWQLAYTELYFTDTLW 219
>gi|257878532|ref|ZP_05658185.1| undecaprenyl diphosphate synthase, partial [Enterococcus faecium
1,230,933]
gi|257812760|gb|EEV41518.1| undecaprenyl diphosphate synthase [Enterococcus faecium 1,230,933]
Length = 269
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQE E+ G + E+ID++ I K H+ P DP++ IR+SGE R
Sbjct: 160 VTAVQEIAEEVAKG-EIHAEEIDDELIAK------HLMTGFLPKELQDPELMIRTSGEER 212
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 213 ISNFLLWQIAYSELYFTKALW 233
>gi|206890196|ref|YP_002248077.1| di-trans,poly-cis-decaprenylcistransferase [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742134|gb|ACI21191.1| di-trans,poly-cis-decaprenylcistransferase [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 235
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EK+DED ++D A P+PD+ IR+SGE R SNFL+WQ++ Y LW
Sbjct: 153 EKVDEDFFSSMLDT------AGIPEPDLIIRTSGEQRISNFLVWQSAYSEFYFSQTLW 204
>gi|406888900|gb|EKD35237.1| hypothetical protein ACD_75C01985G0001, partial [uncultured
bacterium]
Length = 234
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 15 LILPVPDVQEYCEDK-LDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGET 73
L+ V + C D LD E I E+TI + H+ A PDPD+ IR+ GE
Sbjct: 131 LVRAVKKIGGSCRDGHLD-----VEAISEETITE------HLDTAAMPDPDLLIRTGGEA 179
Query: 74 RPSNFLLWQTSNCSLYSPAALW 95
R SNFLLWQ S +Y +W
Sbjct: 180 RLSNFLLWQLSYAEIYFTEIMW 201
>gi|294462538|gb|ADE76815.1| unknown [Picea sitchensis]
Length = 318
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 25 YCEDKLDGS-----QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
+ +D DGS L+ + ED ++E+H++ A +P + IR+SGE R SNFL
Sbjct: 212 HSQDDDDGSITEEIHGLQSSVTED------EIERHLYTADCGEPQLLIRTSGEIRLSNFL 265
Query: 80 LWQTSNCSLYSPAALWLE 97
LWQ+S LY LW E
Sbjct: 266 LWQSSFTFLYVTPVLWPE 283
>gi|311743134|ref|ZP_07716942.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
gi|311313814|gb|EFQ83723.1| di-trans,poly-cis-decaprenylcistransferase [Aeromicrobium marinum
DSM 15272]
Length = 253
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 34 QALKEKIDEDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
QA K + + + LV D+ +H++ PDPD+ IR+SGE R S FLLWQ+ + Y
Sbjct: 166 QAAKGRDLTEVAETLVVDDIAEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEFYFC 225
Query: 92 AALW 95
ALW
Sbjct: 226 DALW 229
>gi|428301857|ref|YP_007140163.1| undecaprenyl pyrophosphate synthetase [Calothrix sp. PCC 6303]
gi|428238401|gb|AFZ04191.1| Undecaprenyl pyrophosphate synthetase [Calothrix sp. PCC 6303]
Length = 249
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++IDED E+H++ DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 173 DEIDEDVF------ERHLYTVGVSDPDLLIRTSGEMRISNFLLWQIAYTEIYVTDTLW 224
>gi|257894709|ref|ZP_05674362.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,408]
gi|257831088|gb|EEV57695.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,408]
Length = 237
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQE E+ G + E+ID++ I K H+ P DP++ IR+SGE R
Sbjct: 128 VTAVQEIAEEVAKG-EIHAEEIDDELIAK------HLMTGFLPKELQDPELMIRTSGEER 180
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 181 ISNFLLWQIAYSELYFTKALW 201
>gi|167630329|ref|YP_001680828.1| undecaprenyl diphosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167593069|gb|ABZ84817.1| undecaprenyl diphosphate synthase, putative [Heliobacterium
modesticaldum Ice1]
Length = 260
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
QA +ID + I + + + +H++ A PDPD+ IR SGE R SNFLLWQ++ ++
Sbjct: 173 QARDGQIDPERIDEAL-LNRHLYTADVPDPDLLIRPSGELRLSNFLLWQSAYTEIWVTPT 231
Query: 94 LWLEEKKK 101
LW + +K
Sbjct: 232 LWPDFGRK 239
>gi|296271049|ref|YP_003653681.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
gi|296093836|gb|ADG89788.1| undecaprenyl diphosphate synthase [Thermobispora bispora DSM 43833]
Length = 253
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 43 DTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ + +++DVE KH++ PDPD+ IR+SGE R S FLLWQ+++ Y A W
Sbjct: 174 EELAEILDVEHIAKHLYTRGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFYFCEAYW 229
>gi|212223519|ref|YP_002306755.1| undecaprenyl diphosphate synthase [Thermococcus onnurineus NA1]
gi|212008476|gb|ACJ15858.1| undecaprenyl diphosphate synthase [Thermococcus onnurineus NA1]
Length = 264
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E +D L G + +E IDED IKK +++ PDPDI IR+ GE R SNFLL+
Sbjct: 174 VKEIVDDVLAGKIS-REDIDEDLIKK------YLYYPNMPDPDIVIRTGGEVRISNFLLY 226
Query: 82 QTSNCSLY 89
Q + L+
Sbjct: 227 QIAYSELF 234
>gi|15239357|ref|NP_200858.1| dehydrodolichyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75246018|sp|Q8LED0.1|DDPS7_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 7;
Short=Dedol-PP synthase 7
gi|21553621|gb|AAM62714.1| undecaprenyl diphosphate synthase [Arabidopsis thaliana]
gi|332009954|gb|AED97337.1| dehydrodolichyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 271
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 41 DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + +L DVE+ M+ ++ P PD+ IR+ G R SNF+ WQTS L+ ALW
Sbjct: 188 DDLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALW 242
>gi|9757752|dbj|BAB08233.1| undecaprenyl pyrophosphate synthetase-like protein [Arabidopsis
thaliana]
Length = 251
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 41 DEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + +L DVE+ M+ ++ P PD+ IR+ G R SNF+ WQTS L+ ALW
Sbjct: 168 DDLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALW 222
>gi|257884336|ref|ZP_05663989.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,501]
gi|257820174|gb|EEV47322.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,501]
Length = 270
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQE E+ G + E+ID++ I K H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQEIAEEVAKG-EIHAEEIDDELIAK------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|257882950|ref|ZP_05662603.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,502]
gi|257889271|ref|ZP_05668924.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,410]
gi|260560117|ref|ZP_05832295.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium C68]
gi|293556643|ref|ZP_06675208.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1039]
gi|293560206|ref|ZP_06676708.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1162]
gi|293567717|ref|ZP_06679059.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1071]
gi|294613943|ref|ZP_06693878.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1636]
gi|294618729|ref|ZP_06698261.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1679]
gi|294620757|ref|ZP_06699964.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
U0317]
gi|314937499|ref|ZP_07844832.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a04]
gi|314942158|ref|ZP_07849012.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133C]
gi|314947502|ref|ZP_07850917.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0082]
gi|314951489|ref|ZP_07854538.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133A]
gi|314992579|ref|ZP_07857997.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133B]
gi|314995486|ref|ZP_07860586.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a01]
gi|383329042|ref|YP_005354926.1| undecaprenyl diphosphate synthase [Enterococcus faecium Aus0004]
gi|389868865|ref|YP_006376288.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
DO]
gi|406580780|ref|ZP_11055969.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD4E]
gi|406583048|ref|ZP_11058141.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD3E]
gi|406585400|ref|ZP_11060390.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD2E]
gi|406590575|ref|ZP_11064938.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD1E]
gi|410937303|ref|ZP_11369164.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus sp. GMD5E]
gi|415899573|ref|ZP_11551638.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E4453]
gi|416141213|ref|ZP_11599350.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E4452]
gi|424789627|ref|ZP_18216268.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
V689]
gi|424795522|ref|ZP_18221365.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
S447]
gi|424834692|ref|ZP_18259389.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R501]
gi|424857039|ref|ZP_18281236.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R499]
gi|424864998|ref|ZP_18288884.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R497]
gi|424950014|ref|ZP_18365239.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R496]
gi|424953275|ref|ZP_18368249.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R494]
gi|424957570|ref|ZP_18372289.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R446]
gi|424960653|ref|ZP_18375149.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1986]
gi|424964710|ref|ZP_18378779.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1190]
gi|424968098|ref|ZP_18381754.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1140]
gi|424969986|ref|ZP_18383528.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1139]
gi|424975314|ref|ZP_18388483.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1137]
gi|424976816|ref|ZP_18389880.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1123]
gi|424980697|ref|ZP_18393473.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV99]
gi|424983746|ref|ZP_18396319.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV69]
gi|424988606|ref|ZP_18400918.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV38]
gi|424992635|ref|ZP_18404683.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV26]
gi|424993467|ref|ZP_18405459.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV168]
gi|424997917|ref|ZP_18409642.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV165]
gi|425002458|ref|ZP_18413886.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV161]
gi|425004623|ref|ZP_18415919.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV102]
gi|425007594|ref|ZP_18418715.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV1]
gi|425010952|ref|ZP_18421877.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E422]
gi|425014958|ref|ZP_18425602.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E417]
gi|425018206|ref|ZP_18428674.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
C621]
gi|425019868|ref|ZP_18430203.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
C497]
gi|425022998|ref|ZP_18433142.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
C1904]
gi|425031949|ref|ZP_18437042.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
515]
gi|425034608|ref|ZP_18439489.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
514]
gi|425037529|ref|ZP_18442190.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
513]
gi|425040721|ref|ZP_18445173.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
511]
gi|425046205|ref|ZP_18450243.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
510]
gi|425048194|ref|ZP_18452115.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
509]
gi|425051376|ref|ZP_18455043.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
506]
gi|425060165|ref|ZP_18463469.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
503]
gi|427396284|ref|ZP_18889043.1| undecaprenyl pyrophosphate synthase [Enterococcus durans
FB129-CNAB-4]
gi|430822631|ref|ZP_19441209.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0120]
gi|430825596|ref|ZP_19443800.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0164]
gi|430827729|ref|ZP_19445861.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0269]
gi|430830813|ref|ZP_19448869.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0333]
gi|430832982|ref|ZP_19450995.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0679]
gi|430835688|ref|ZP_19453676.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0680]
gi|430838217|ref|ZP_19456165.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0688]
gi|430845932|ref|ZP_19463797.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1133]
gi|430849578|ref|ZP_19467351.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1185]
gi|430851773|ref|ZP_19469508.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1258]
gi|430858028|ref|ZP_19475657.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1552]
gi|430860308|ref|ZP_19477912.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1573]
gi|430865191|ref|ZP_19480949.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1574]
gi|430871448|ref|ZP_19483771.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1575]
gi|430949038|ref|ZP_19485957.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1576]
gi|431005361|ref|ZP_19489007.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1578]
gi|431146248|ref|ZP_19499145.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1620]
gi|431229882|ref|ZP_19502085.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1622]
gi|431252275|ref|ZP_19504333.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1623]
gi|431292256|ref|ZP_19506804.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1626]
gi|431497588|ref|ZP_19514742.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1634]
gi|431542015|ref|ZP_19518244.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1731]
gi|431652723|ref|ZP_19523805.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1904]
gi|431743024|ref|ZP_19531905.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2071]
gi|431746288|ref|ZP_19535122.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2134]
gi|431750010|ref|ZP_19538737.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2297]
gi|431754930|ref|ZP_19543590.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2883]
gi|431764218|ref|ZP_19552761.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E4215]
gi|431767308|ref|ZP_19555762.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1321]
gi|431770927|ref|ZP_19559321.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1644]
gi|431772380|ref|ZP_19560721.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2369]
gi|431775674|ref|ZP_19563946.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2560]
gi|431778893|ref|ZP_19567098.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E4389]
gi|431781785|ref|ZP_19569928.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E6012]
gi|431785831|ref|ZP_19573853.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E6045]
gi|447912464|ref|YP_007393876.1| Undecaprenyl pyrophosphate synthetase [Enterococcus faecium NRRL
B-2354]
gi|257818608|gb|EEV45936.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,502]
gi|257825631|gb|EEV52257.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,231,410]
gi|260073952|gb|EEW62276.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium C68]
gi|291589560|gb|EFF21366.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1071]
gi|291593218|gb|EFF24792.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1636]
gi|291595042|gb|EFF26387.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1679]
gi|291599737|gb|EFF30747.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
U0317]
gi|291601178|gb|EFF31465.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1039]
gi|291605878|gb|EFF35310.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E1162]
gi|313590320|gb|EFR69165.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a01]
gi|313592871|gb|EFR71716.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133B]
gi|313596329|gb|EFR75174.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133A]
gi|313599081|gb|EFR77926.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133C]
gi|313643140|gb|EFS07720.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0133a04]
gi|313646052|gb|EFS10632.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX0082]
gi|364089298|gb|EHM31998.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E4453]
gi|364090241|gb|EHM32852.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E4452]
gi|378938736|gb|AFC63808.1| undecaprenyl diphosphate synthase [Enterococcus faecium Aus0004]
gi|388534114|gb|AFK59306.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
DO]
gi|402921800|gb|EJX42221.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
V689]
gi|402922026|gb|EJX42433.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R501]
gi|402924228|gb|EJX44446.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
S447]
gi|402929523|gb|EJX49272.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R499]
gi|402933913|gb|EJX53313.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R496]
gi|402939471|gb|EJX58378.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R497]
gi|402939523|gb|EJX58429.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R494]
gi|402943180|gb|EJX61687.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
R446]
gi|402945992|gb|EJX64306.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1190]
gi|402946865|gb|EJX65111.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1986]
gi|402952867|gb|EJX70636.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1140]
gi|402954055|gb|EJX71712.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1137]
gi|402962865|gb|EJX79772.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1139]
gi|402965687|gb|EJX82383.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV99]
gi|402968342|gb|EJX84828.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
P1123]
gi|402970656|gb|EJX86974.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV69]
gi|402971628|gb|EJX87892.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV38]
gi|402972370|gb|EJX88576.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV26]
gi|402982537|gb|EJX97998.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV168]
gi|402983394|gb|EJX98796.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV161]
gi|402984737|gb|EJY00019.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV165]
gi|402988917|gb|EJY03886.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV102]
gi|402994625|gb|EJY09145.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
ERV1]
gi|402997219|gb|EJY11564.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E417]
gi|402998314|gb|EJY12576.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E422]
gi|403002821|gb|EJY16763.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
C621]
gi|403010597|gb|EJY23961.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
C497]
gi|403011320|gb|EJY24641.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
C1904]
gi|403014396|gb|EJY27405.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
515]
gi|403019976|gb|EJY32543.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
514]
gi|403021775|gb|EJY34203.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
513]
gi|403024967|gb|EJY37080.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
510]
gi|403027897|gb|EJY39749.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
511]
gi|403031401|gb|EJY43010.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
509]
gi|403037798|gb|EJY49055.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
506]
gi|403042939|gb|EJY53875.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
503]
gi|404453535|gb|EKA00588.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD4E]
gi|404457203|gb|EKA03765.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD3E]
gi|404462687|gb|EKA08400.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD2E]
gi|404469159|gb|EKA13985.1| undecaprenyl diphosphate synthase [Enterococcus sp. GMD1E]
gi|410734414|gb|EKQ76334.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus sp. GMD5E]
gi|425722954|gb|EKU85845.1| undecaprenyl pyrophosphate synthase [Enterococcus durans
FB129-CNAB-4]
gi|430443208|gb|ELA53205.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0120]
gi|430446061|gb|ELA55760.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0164]
gi|430482402|gb|ELA59520.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0333]
gi|430484331|gb|ELA61352.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0269]
gi|430486437|gb|ELA63273.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0679]
gi|430489225|gb|ELA65854.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0680]
gi|430491961|gb|ELA68402.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0688]
gi|430537329|gb|ELA77672.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1185]
gi|430539752|gb|ELA79991.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1133]
gi|430542355|gb|ELA82463.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1258]
gi|430545980|gb|ELA85946.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1552]
gi|430552745|gb|ELA92473.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1573]
gi|430553269|gb|ELA92970.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1574]
gi|430557768|gb|ELA97205.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1575]
gi|430557883|gb|ELA97319.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1576]
gi|430561394|gb|ELB00662.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1578]
gi|430573868|gb|ELB12646.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1622]
gi|430575788|gb|ELB14485.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1620]
gi|430578701|gb|ELB17253.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1623]
gi|430582168|gb|ELB20596.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1626]
gi|430588523|gb|ELB26715.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1634]
gi|430593062|gb|ELB31049.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1731]
gi|430600751|gb|ELB38381.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1904]
gi|430607388|gb|ELB44708.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2071]
gi|430609057|gb|ELB46263.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2134]
gi|430610483|gb|ELB47627.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2297]
gi|430618758|gb|ELB55599.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2883]
gi|430631112|gb|ELB67442.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1321]
gi|430631403|gb|ELB67725.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E4215]
gi|430634377|gb|ELB70503.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1644]
gi|430638068|gb|ELB74049.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2369]
gi|430642943|gb|ELB78709.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2560]
gi|430643374|gb|ELB79118.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E4389]
gi|430646702|gb|ELB82168.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E6045]
gi|430648790|gb|ELB84187.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E6012]
gi|445188173|gb|AGE29815.1| Undecaprenyl pyrophosphate synthetase [Enterococcus faecium NRRL
B-2354]
Length = 270
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQE E+ G + E+ID++ I K H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQEIAEEVAKG-EIHAEEIDDELIAK------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|87118623|ref|ZP_01074522.1| undecaprenyl diphosphate synthase [Marinomonas sp. MED121]
gi|86166257|gb|EAQ67523.1| undecaprenyl diphosphate synthase [Marinomonas sp. MED121]
Length = 248
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ C+ LDG L ++I+E+TI +++A PDPD+ IR+SGE R SNFLLW
Sbjct: 157 ARKVCQQVLDGELNL-DQINEETIAS------QLYLADLPDPDLIIRTSGEERISNFLLW 209
Query: 82 QTSNCSLYSPAALW 95
Q + LW
Sbjct: 210 QAAYSEFVFLPVLW 223
>gi|261207395|ref|ZP_05922081.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium TC 6]
gi|289566683|ref|ZP_06447100.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
D344SRF]
gi|430843933|ref|ZP_19461831.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1050]
gi|430854922|ref|ZP_19472634.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1392]
gi|431370250|ref|ZP_19509949.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1627]
gi|260078286|gb|EEW65991.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium TC 6]
gi|289161542|gb|EFD09425.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
D344SRF]
gi|430496523|gb|ELA72582.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1050]
gi|430547801|gb|ELA87717.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1392]
gi|430583997|gb|ELB22355.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1627]
Length = 270
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQE E+ G + E+ID++ I K H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQEIAEEVAKG-EIHAEEIDDELIAK------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|297202102|ref|ZP_06919499.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
gi|197713537|gb|EDY57571.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sviceus
ATCC 29083]
Length = 257
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
DK + L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AHDKGTSMEELAEAVDIDMIGR------HLYTGDQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCEVFW 233
>gi|124267164|ref|YP_001021168.1| undecaprenyl pyrophosphate synthetase [Methylibium petroleiphilum
PM1]
gi|124259939|gb|ABM94933.1| Undecaprenyl pyrophosphate synthetase [Methylibium petroleiphilum
PM1]
Length = 258
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 21 DVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLL 80
DV + C QA+ + I D + + + ++M ++ APDPD+ IR+ GE R SNFLL
Sbjct: 152 DVLQACR------QAIADGIPADQLNE-ARLGQYMALSHAPDPDLFIRTGGEVRISNFLL 204
Query: 81 WQTSNCSLYSPAALW 95
WQ + LY LW
Sbjct: 205 WQAAYSELYFTDCLW 219
>gi|430819858|ref|ZP_19438502.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0045]
gi|430440061|gb|ELA50338.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E0045]
Length = 270
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQE E+ G + E+ID++ I K H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQEIAEEVAKG-EIHAEEIDDELIAK------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|258621000|ref|ZP_05716034.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM573]
gi|262170775|ref|ZP_06038453.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus MB-451]
gi|424807468|ref|ZP_18232876.1| undecaprenyl diphosphate synthase [Vibrio mimicus SX-4]
gi|449143608|ref|ZP_21774431.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus CAIM 602]
gi|258586388|gb|EEW11103.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM573]
gi|261891851|gb|EEY37837.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus MB-451]
gi|342325410|gb|EGU21190.1| undecaprenyl diphosphate synthase [Vibrio mimicus SX-4]
gi|449080606|gb|EMB51517.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus CAIM 602]
Length = 250
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDE-DTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + D + +D +++H+ MA P+ D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 204 AYAEMYFTPVFW 215
>gi|238021665|ref|ZP_04602091.1| hypothetical protein GCWU000324_01568 [Kingella oralis ATCC 51147]
gi|237866279|gb|EEP67321.1| hypothetical protein GCWU000324_01568 [Kingella oralis ATCC 51147]
Length = 228
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 6 DVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDED-TIKKLVDVEKHMFMAVAPDPD 64
D + L N+ L + +Y + D QA I E T D+ + +A AP+PD
Sbjct: 102 DAEALTANNTGLTLTIAADYG-GRWDILQAANALIAEGKTHISEADLASRLMLAEAPEPD 160
Query: 65 ITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ IR+ GETR SNF+LWQ + Y LW
Sbjct: 161 LFIRTGGETRISNFMLWQMAYAEFYFTPVLW 191
>gi|333979937|ref|YP_004517882.1| UDP pyrophosphate synthase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823418|gb|AEG16081.1| Undecaprenyl pyrophosphate synthase [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 274
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE T V H++ A PDPD+ IR SG+ R SNFLLWQ S + +W
Sbjct: 186 EQIDEST------VSSHLYTAGQPDPDLLIRPSGDYRVSNFLLWQLSYTEFWMTTVMW 237
>gi|94263225|ref|ZP_01287042.1| Di-trans-poly-cis-decaprenylcistransferase [delta proteobacterium
MLMS-1]
gi|93456443|gb|EAT06563.1| Di-trans-poly-cis-decaprenylcistransferase [delta proteobacterium
MLMS-1]
Length = 245
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
G QA+ I+E+TI +D A PDPD+ IR+ GE R SNFLLWQ S LY
Sbjct: 155 GRQAVA-AINEETIADYLDT------AGLPDPDLLIRTGGEARLSNFLLWQLSYSELYFT 207
Query: 92 AALW 95
LW
Sbjct: 208 EVLW 211
>gi|350569880|ref|ZP_08938273.1| undecaprenyl diphosphate synthase [Propionibacterium avidum ATCC
25577]
gi|348659804|gb|EGY76529.1| undecaprenyl diphosphate synthase [Propionibacterium avidum ATCC
25577]
Length = 273
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E+H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEEHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|386861331|ref|YP_006274280.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1026b]
gi|418382741|ref|ZP_12966675.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 354a]
gi|418538490|ref|ZP_13104099.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1026a]
gi|418544862|ref|ZP_13110132.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1258a]
gi|418551664|ref|ZP_13116572.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1258b]
gi|418557709|ref|ZP_13122297.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 354e]
gi|385347217|gb|EIF53880.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1258b]
gi|385347776|gb|EIF54426.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1026a]
gi|385347890|gb|EIF54536.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1258a]
gi|385364366|gb|EIF70083.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 354e]
gi|385377083|gb|EIF81703.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 354a]
gi|385658459|gb|AFI65882.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1026b]
Length = 237
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 146 EIDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTFW 196
>gi|451341080|ref|ZP_21911556.1| Undecaprenyl pyrophosphate synthetase [Amycolatopsis azurea DSM
43854]
gi|449416095|gb|EMD21872.1| Undecaprenyl pyrophosphate synthetase [Amycolatopsis azurea DSM
43854]
Length = 248
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L + DE T + K++DV+ +HM+ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 158 LLQHADEGTSIRELAKILDVDHISEHMYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 217
Query: 89 YSPAALW 95
+ A W
Sbjct: 218 WFTEAYW 224
>gi|427717818|ref|YP_007065812.1| undecaprenyl pyrophosphate synthetase [Calothrix sp. PCC 7507]
gi|427350254|gb|AFY32978.1| Undecaprenyl pyrophosphate synthetase [Calothrix sp. PCC 7507]
Length = 249
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E H++ A DPD+ IR+SGE R SNFLLWQ + +Y ALW
Sbjct: 181 ESHLYTAGIADPDLLIRTSGEMRLSNFLLWQMAYGEIYITDALW 224
>gi|116749217|ref|YP_845904.1| undecaprenyl diphosphate synthase [Syntrophobacter fumaroxidans
MPOB]
gi|116698281|gb|ABK17469.1| Undecaprenyl pyrophosphate synthetase [Syntrophobacter fumaroxidans
MPOB]
Length = 248
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++Y D L G + + D + + + +++F PDPD+ IR+ GE R SNFLLW
Sbjct: 147 ARKYAGDVLAG------RAESDALSQ-EEFSRYLFTTDLPDPDLIIRTGGEYRVSNFLLW 199
Query: 82 QTSNCSLYSPAALW 95
Q + LY A LW
Sbjct: 200 QLAYAELYITATLW 213
>gi|452958547|gb|EME63900.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis decaplanina
DSM 44594]
Length = 248
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L + DE T + K++DV+ +HM+ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 158 LLQHADEGTSIRELAKILDVDHISEHMYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 217
Query: 89 YSPAALW 95
+ A W
Sbjct: 218 WFTEAYW 224
>gi|163786496|ref|ZP_02180944.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteriales bacterium ALC-1]
gi|159878356|gb|EDP72412.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteriales bacterium ALC-1]
Length = 246
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E IDE I K H++ PD D+ IR+SGE R SNFLLWQ + LY LW +
Sbjct: 165 ESIDESIINK------HLYTQNLPDVDLLIRTSGEQRISNFLLWQIAYAELYFTDILWPD 218
Query: 98 EKKKRQF 104
KK+ +
Sbjct: 219 FKKENLY 225
>gi|374582859|ref|ZP_09655953.1| undecaprenyl diphosphate synthase [Desulfosporosinus youngiae DSM
17734]
gi|374418941|gb|EHQ91376.1| undecaprenyl diphosphate synthase [Desulfosporosinus youngiae DSM
17734]
Length = 241
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ V+ C D L G K+KI+E + DV +F PDPD+ IR+SGE R SNF
Sbjct: 144 IGAVKTLCSDVLSG----KQKIEEIGEAQFSDV---LFTKGLPDPDLMIRTSGEMRLSNF 196
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + + LW
Sbjct: 197 LLWQLAYTEIVVIEDLW 213
>gi|258627354|ref|ZP_05722138.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM603]
gi|258580392|gb|EEW05357.1| Undecaprenyl diphosphate synthase [Vibrio mimicus VM603]
Length = 250
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDE-DTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + D + +D +++H+ MA P+ D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 204 AYAEMYFTPVFW 215
>gi|156937379|ref|YP_001435175.1| undecaprenyl pyrophosphate synthetase [Ignicoccus hospitalis
KIN4/I]
gi|156566363|gb|ABU81768.1| Undecaprenyl pyrophosphate synthetase [Ignicoccus hospitalis
KIN4/I]
Length = 270
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++IDE+ I + H++ PDPD+ IR+SGE R SNFLLWQ++ LY W E
Sbjct: 195 DQIDENVITQ------HLYTENLPDPDLIIRTSGEERISNFLLWQSAYSELYFANIYWPE 248
Query: 98 EKK 100
++
Sbjct: 249 IRR 251
>gi|219120083|ref|XP_002180788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407504|gb|EEC47440.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 266
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 27 EDKLDGSQALKEKIDE-DTIKKLVDVEKHMFMAV-----APDPDITIRSSGETRPSNFLL 80
+D L+ S+ L E +D+ +T + D+++ F + PDPD+ +R+SGE+R SNFLL
Sbjct: 158 QDILNASRRLVEAVDDANTEFTIADIDEDAFCSFLSTVGIPDPDLIVRTSGESRLSNFLL 217
Query: 81 WQTSNCSLYSPAALW 95
W + LY LW
Sbjct: 218 WNAAYAELYFTTVLW 232
>gi|17230487|ref|NP_487035.1| UDP pyrophosphate synthase [Nostoc sp. PCC 7120]
gi|20140456|sp|P58563.1|ISPT1_NOSS1 RecName: Full=Isoprenyl transferase 1
gi|17132089|dbj|BAB74694.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7120]
Length = 249
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 27 EDKLDGSQALKEKIDE-----DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ L +A+ +K+ + D I + V E+H++ A DPD+ IR+SGE R SNFLLW
Sbjct: 152 QEILQACRAIAQKVQQGLLQPDEINEEV-FERHLYTAGISDPDLLIRTSGEMRLSNFLLW 210
Query: 82 QTSNCSLYSPAALW 95
Q + +Y LW
Sbjct: 211 QMAYGEIYITDTLW 224
>gi|429197894|ref|ZP_19189760.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces ipomoeae
91-03]
gi|428666413|gb|EKX65570.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces ipomoeae
91-03]
Length = 257
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
+DK + L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AQDKGTSMEELAESVDIDMIGR------HLYTVDQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCDVFW 233
>gi|434393423|ref|YP_007128370.1| Undecaprenyl pyrophosphate synthetase [Gloeocapsa sp. PCC 7428]
gi|428265264|gb|AFZ31210.1| Undecaprenyl pyrophosphate synthetase [Gloeocapsa sp. PCC 7428]
Length = 249
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 ERHLYTAGIGDPDLLIRTSGEMRISNFLLWQMAYAEIYITETLW 224
>gi|357421186|ref|YP_004928635.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803696|gb|AER40810.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 240
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
+ H++ PD D+ IR+SGE R SNFLLWQ++ LY LW + +KK F
Sbjct: 171 QNHLYTKKIPDVDLIIRTSGEQRISNFLLWQSAYAELYFTNVLWPDFRKKDFF 223
>gi|294631153|ref|ZP_06709713.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
gi|292834486|gb|EFF92835.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. e14]
Length = 257
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 180 LAEAVDVDMIGR------HLYTKAQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFW 233
>gi|167570367|ref|ZP_02363241.1| undecaprenyl diphosphate synthase [Burkholderia oklahomensis C6786]
Length = 260
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++DED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 169 EVDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTELYFTDKFW 219
>gi|425445447|ref|ZP_18825477.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9443]
gi|425457094|ref|ZP_18836800.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9807]
gi|389734552|emb|CCI01801.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9443]
gi|389801642|emb|CCI19215.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9807]
Length = 249
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + + + +D E++++ A P+PD+ IRSSGE R SNFLLWQ
Sbjct: 152 EEIVQACQAIARQVQQGLVSPEAIDESLFEQYLYTAGIPNPDLLIRSSGEMRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYVTDTLW 224
>gi|425438812|ref|ZP_18819154.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9717]
gi|389717668|emb|CCH98269.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9717]
Length = 249
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + + + +D E++++ A P+PD+ IRSSGE R SNFLLWQ
Sbjct: 152 EEIVQACQAIARQVQQGLVSPEAIDESLFEQYLYTAGIPNPDLLIRSSGEMRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYVTDTLW 224
>gi|339627995|ref|YP_004719638.1| UDP pyrophosphate synthetase [Sulfobacillus acidophilus TPY]
gi|339285784|gb|AEJ39895.1| undecaprenyl pyrophosphate synthetase [Sulfobacillus acidophilus
TPY]
Length = 255
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++DE T+ + +D A PDPD+ IRSSGE R SNFLLWQ + +Y LW
Sbjct: 175 RLDEATLNRYLDT------AGLPDPDLVIRSSGELRLSNFLLWQMAYAEIYVTDTLW 225
>gi|409992269|ref|ZP_11275469.1| undecaprenyl pyrophosphate synthase [Arthrospira platensis str.
Paraca]
gi|409936860|gb|EKN78324.1| undecaprenyl pyrophosphate synthase [Arthrospira platensis str.
Paraca]
Length = 253
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + T++ + +D EK+++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 152 EEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTCDPDLLIRTSGELRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 IAYAEIYVTDTLW 224
>gi|83720615|ref|YP_442555.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
gi|167581482|ref|ZP_02374356.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
TXDOH]
gi|167619592|ref|ZP_02388223.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis Bt4]
gi|257138764|ref|ZP_05587026.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
gi|83654440|gb|ABC38503.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis E264]
Length = 260
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 EIDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTFW 219
>gi|408419091|ref|YP_006760505.1| undecaprenyl pyrophosphate synthase UppS [Desulfobacula toluolica
Tol2]
gi|405106304|emb|CCK79801.1| UppS: undecaprenyl pyrophosphate synthase [Desulfobacula toluolica
Tol2]
Length = 253
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 176 ISNHLYTKTMPDPDLIIRTSGEYRLSNFLLWQAAYSEIYISDTLW 220
>gi|420176904|ref|ZP_14683298.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM057]
gi|420179497|ref|ZP_14685788.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM053]
gi|394251811|gb|EJD96887.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM057]
gi|394253701|gb|EJD98697.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM053]
Length = 256
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|166365279|ref|YP_001657552.1| undecaprenyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|425467546|ref|ZP_18846826.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9809]
gi|166087652|dbj|BAG02360.1| undecaprenyl pyrophosphate synthetase [Microcystis aeruginosa
NIES-843]
gi|389829684|emb|CCI28835.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9809]
Length = 249
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + + + +D E++++ A P+PD+ IRSSGE R SNFLLWQ
Sbjct: 152 EEIVQACQAIARQVQQGLVSPEAIDESLFEQYLYTAGIPNPDLLIRSSGEMRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYVTDTLW 224
>gi|75907137|ref|YP_321433.1| undecaprenyl pyrophosphate synthase [Anabaena variabilis ATCC
29413]
gi|92090650|sp|Q9ZEJ7.2|ISPT_ANAVT RecName: Full=Isoprenyl transferase
gi|75700862|gb|ABA20538.1| Undecaprenyl pyrophosphate synthetase [Anabaena variabilis ATCC
29413]
Length = 249
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++IDE+ E+H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 173 DEIDEEVF------ERHLYTAGIADPDLLIRTSGEMRLSNFLLWQMAYGEIYITDTLW 224
>gi|385806266|ref|YP_005842664.1| undecaprenyl diphosphate synthase [Fervidicoccus fontis Kam940]
gi|383796129|gb|AFH43212.1| undecaprenyl diphosphate synthase [Fervidicoccus fontis Kam940]
Length = 267
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ +++ D G +L E IDE+ V ++F + +PDPD+ IR+SGE R SNF
Sbjct: 174 IEAIKKIASDYKKGVISLNE-IDENK------VSSYLFTSDSPDPDLIIRTSGEERISNF 226
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ L+ W E +K
Sbjct: 227 LLWQSAYSELFFTDVYWPEFRK 248
>gi|416124340|ref|ZP_11595336.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis FRI909]
gi|319401450|gb|EFV89660.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis FRI909]
Length = 256
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQVS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|218781001|ref|YP_002432319.1| undecaprenyl diphosphate synthase [Desulfatibacillum alkenivorans
AK-01]
gi|218762385|gb|ACL04851.1| undecaprenyl diphosphate synthase [Desulfatibacillum alkenivorans
AK-01]
Length = 252
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE I + H++ A PDPD+ IR+SGE R SNFLLWQ + + LW
Sbjct: 171 ELIDESVISQ------HLYTATMPDPDLMIRTSGEVRISNFLLWQLAYAEMAFTPKLW 222
>gi|338731530|ref|YP_004660922.1| UDP pyrophosphate synthetase [Thermotoga thermarum DSM 5069]
gi|335365881|gb|AEH51826.1| Undecaprenyl pyrophosphate synthetase [Thermotoga thermarum DSM
5069]
Length = 233
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+K+DE T++ +++ PDPD+ IR+SGE R SNFL+WQ + LY LW
Sbjct: 149 QKLDESTLRNF------LYLPDVPDPDLVIRTSGEKRLSNFLIWQIAYSELYFTKKLW 200
>gi|443477711|ref|ZP_21067536.1| Undecaprenyl pyrophosphate synthetase [Pseudanabaena biceps PCC
7429]
gi|443017105|gb|ELS31624.1| Undecaprenyl pyrophosphate synthetase [Pseudanabaena biceps PCC
7429]
Length = 247
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 21 DVQEYCEDKLDGSQALK---EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
++ + C + +QA + E IDE+ E+H++ A +PD+ IR+SGE R SN
Sbjct: 151 EILKVCRQIAEAAQAGEIKPENIDENLF------EQHLYTAGTDNPDLLIRTSGEMRLSN 204
Query: 78 FLLWQTSNCSLYSPAALW 95
FLLWQ + +Y LW
Sbjct: 205 FLLWQMAYTEMYFTHTLW 222
>gi|418411679|ref|ZP_12984945.1| undecaprenyl pyrophosphate synthase [Staphylococcus epidermidis
BVS058A4]
gi|410891262|gb|EKS39059.1| undecaprenyl pyrophosphate synthase [Staphylococcus epidermidis
BVS058A4]
Length = 256
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|420165205|ref|ZP_14671909.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM088]
gi|394236372|gb|EJD81906.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM088]
Length = 254
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 164 YNELQLNGQGS--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 215
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 216 YSEFIFNEKLWPDFDEKELRE 236
>gi|291567169|dbj|BAI89441.1| undecaprenyl pyrophosphate synthetase [Arthrospira platensis
NIES-39]
Length = 253
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + T++ + +D EK+++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 152 EEIVRACQAIANQVKQGTLEPEAIDGALFEKYLYTAGTCDPDLLIRTSGELRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 IAYAEIYVTDTLW 224
>gi|262166333|ref|ZP_06034070.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus VM223]
gi|262026049|gb|EEY44717.1| undecaprenyl pyrophosphate synthetase [Vibrio mimicus VM223]
Length = 232
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDE-DTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + D + +D +++H+ MA P+ D+ IR+SGE R SNF+LWQ
Sbjct: 126 DILQATQALAEKVAQGDLLPAEIDEAMIKQHLTMADLPEVDLLIRTSGECRISNFMLWQL 185
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 186 AYAEMYFTPVFW 197
>gi|291437519|ref|ZP_06576909.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
gi|291340414|gb|EFE67370.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces ghanaensis
ATCC 14672]
Length = 257
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 180 LAEAVDVDMIGR------HLYTRAQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFW 233
>gi|363583046|ref|ZP_09315856.1| undecaprenyl pyrophosphate synthase [Flavobacteriaceae bacterium
HQM9]
Length = 245
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I ED IKK H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 166 ITEDVIKK------HLYTYDIPDVDLLIRTSGEQRISNFLLWQIAYAELYFTPVLW 215
>gi|302389811|ref|YP_003825632.1| Undecaprenyl pyrophosphate synthetase [Thermosediminibacter oceani
DSM 16646]
gi|302200439|gb|ADL08009.1| Undecaprenyl pyrophosphate synthetase [Thermosediminibacter oceani
DSM 16646]
Length = 248
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKK 101
E+H+F A PDPD+ IR SGE R SNFLLWQT+ L+ W + K++
Sbjct: 178 EQHLFTAGLPDPDLLIRPSGELRLSNFLLWQTAYSELWFCDTYWPDFKRE 227
>gi|422301535|ref|ZP_16388902.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9806]
gi|389789450|emb|CCI14525.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9806]
Length = 249
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE E++++ A P+PD+ IRSSGE R SNFLLWQ + +Y LW
Sbjct: 173 EEIDESLF------EQYLYTAGIPNPDLLIRSSGEMRISNFLLWQMAYAEIYVTDTLW 224
>gi|379007627|ref|YP_005257078.1| undecaprenyl pyrophosphate synthase [Sulfobacillus acidophilus DSM
10332]
gi|361053889|gb|AEW05406.1| Undecaprenyl pyrophosphate synthase [Sulfobacillus acidophilus DSM
10332]
Length = 243
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++DE T+ + +D A PDPD+ IRSSGE R SNFLLWQ + +Y LW
Sbjct: 163 RLDEATLNRYLDT------AGLPDPDLVIRSSGELRLSNFLLWQMAYAEIYVTDTLW 213
>gi|254179325|ref|ZP_04885924.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1655]
gi|254189289|ref|ZP_04895800.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|254297209|ref|ZP_04964662.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 406e]
gi|403519176|ref|YP_006653310.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
BPC006]
gi|157807737|gb|EDO84907.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 406e]
gi|157936968|gb|EDO92638.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
Pasteur 52237]
gi|184209865|gb|EDU06908.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1655]
gi|403074819|gb|AFR16399.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
BPC006]
Length = 251
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 160 EIDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTFW 210
>gi|53723735|ref|YP_103191.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121598838|ref|YP_993368.1| undecaprenyl diphosphate synthase [Burkholderia mallei SAVP1]
gi|124384785|ref|YP_001029195.1| undecaprenyl diphosphate synthase [Burkholderia mallei NCTC 10229]
gi|126448342|ref|YP_001080875.1| undecaprenyl diphosphate synthase [Burkholderia mallei NCTC 10247]
gi|167000554|ref|ZP_02266365.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
PRL-20]
gi|238562452|ref|ZP_00440475.2| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei GB8
horse 4]
gi|254178729|ref|ZP_04885384.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|254200143|ref|ZP_04906509.1| undecaprenyl diphosphate synthase [Burkholderia mallei FMH]
gi|254206481|ref|ZP_04912833.1| undecaprenyl diphosphate synthase [Burkholderia mallei JHU]
gi|254358110|ref|ZP_04974383.1| undecaprenyl diphosphate synthase [Burkholderia mallei 2002721280]
gi|52427158|gb|AAU47751.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 23344]
gi|121227648|gb|ABM50166.1| undecaprenyl diphosphate synthase [Burkholderia mallei SAVP1]
gi|124292805|gb|ABN02074.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
NCTC 10229]
gi|126241212|gb|ABO04305.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
NCTC 10247]
gi|147749739|gb|EDK56813.1| undecaprenyl diphosphate synthase [Burkholderia mallei FMH]
gi|147753924|gb|EDK60989.1| undecaprenyl diphosphate synthase [Burkholderia mallei JHU]
gi|148027237|gb|EDK85258.1| undecaprenyl diphosphate synthase [Burkholderia mallei 2002721280]
gi|160699768|gb|EDP89738.1| undecaprenyl diphosphate synthase [Burkholderia mallei ATCC 10399]
gi|238522668|gb|EEP86111.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei GB8
horse 4]
gi|243063484|gb|EES45670.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia mallei
PRL-20]
Length = 260
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 EIDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTFW 219
>gi|417647396|ref|ZP_12297236.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU144]
gi|418325847|ref|ZP_12937050.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU071]
gi|420163404|ref|ZP_14670151.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM095]
gi|420167616|ref|ZP_14674268.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM087]
gi|420185436|ref|ZP_14691528.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM040]
gi|329724317|gb|EGG60829.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU144]
gi|365227593|gb|EHM68786.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU071]
gi|394235093|gb|EJD80667.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM095]
gi|394237644|gb|EJD83130.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM087]
gi|394254422|gb|EJD99391.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM040]
Length = 256
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|53719764|ref|YP_108750.1| undecaprenyl pyrophosphate synthetase [Burkholderia pseudomallei
K96243]
gi|76808682|ref|YP_333971.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|126455056|ref|YP_001066748.1| UDP diphosphate synthase [Burkholderia pseudomallei 1106a]
gi|134277426|ref|ZP_01764141.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 305]
gi|167720162|ref|ZP_02403398.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei DM98]
gi|167739167|ref|ZP_02411941.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 14]
gi|167816378|ref|ZP_02448058.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 91]
gi|167824756|ref|ZP_02456227.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 9]
gi|167846288|ref|ZP_02471796.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei B7210]
gi|167894870|ref|ZP_02482272.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 7894]
gi|167903259|ref|ZP_02490464.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei NCTC
13177]
gi|167911500|ref|ZP_02498591.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 112]
gi|167919509|ref|ZP_02506600.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei
BCC215]
gi|217421860|ref|ZP_03453364.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 576]
gi|226200143|ref|ZP_03795689.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237812804|ref|YP_002897255.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei MSHR346]
gi|242316425|ref|ZP_04815441.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106b]
gi|254198300|ref|ZP_04904722.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei S13]
gi|254259286|ref|ZP_04950340.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1710a]
gi|52210178|emb|CAH36157.1| undecaprenyl pyrophosphate synthetase [Burkholderia pseudomallei
K96243]
gi|76578135|gb|ABA47610.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 1710b]
gi|126228698|gb|ABN92238.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106a]
gi|134251076|gb|EBA51155.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei 305]
gi|169655041|gb|EDS87734.1| undecaprenyl diphosphate synthase [Burkholderia pseudomallei S13]
gi|217395602|gb|EEC35620.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 576]
gi|225927827|gb|EEH23868.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei Pakistan 9]
gi|237505258|gb|ACQ97576.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei MSHR346]
gi|242139664|gb|EES26066.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1106b]
gi|254217975|gb|EET07359.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
pseudomallei 1710a]
Length = 260
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 EIDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTFW 219
>gi|403253660|ref|ZP_10919961.1| undecaprenyl pyrophosphate synthase [Thermotoga sp. EMP]
gi|402811194|gb|EJX25682.1| undecaprenyl pyrophosphate synthase [Thermotoga sp. EMP]
Length = 233
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
D S K ++ E+T ++ ++++ PDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 147 DVSHGKKLELTEETFRQ------YLYLPDVPDPDLIIRTSGEMRLSNFLLWQSAYSELYF 200
Query: 91 PAALW 95
LW
Sbjct: 201 FKKLW 205
>gi|4218154|emb|CAA10743.1| hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 251
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++IDE+ E+H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 175 DEIDEEVF------ERHLYTAGIADPDLLIRTSGEMRLSNFLLWQMAYGEIYITDTLW 226
>gi|27467854|ref|NP_764491.1| undecaprenyl pyrophosphate synthase [Staphylococcus epidermidis
ATCC 12228]
gi|57866734|ref|YP_188409.1| undecaprenyl pyrophosphate synthase [Staphylococcus epidermidis
RP62A]
gi|251810691|ref|ZP_04825164.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876308|ref|ZP_06285175.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis SK135]
gi|293366776|ref|ZP_06613452.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417656666|ref|ZP_12306349.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU028]
gi|417658986|ref|ZP_12308599.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU045]
gi|417909804|ref|ZP_12553537.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU037]
gi|417910855|ref|ZP_12554571.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU105]
gi|417913485|ref|ZP_12557152.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU109]
gi|418605377|ref|ZP_13168702.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU041]
gi|418607740|ref|ZP_13170963.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU057]
gi|418609870|ref|ZP_13173004.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU065]
gi|418612133|ref|ZP_13175179.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU117]
gi|418616529|ref|ZP_13179453.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU120]
gi|418622141|ref|ZP_13184897.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU123]
gi|418624397|ref|ZP_13187072.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU125]
gi|418626705|ref|ZP_13189301.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU126]
gi|418628933|ref|ZP_13191449.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU127]
gi|418664800|ref|ZP_13226266.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU081]
gi|419768099|ref|ZP_14294236.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus IS-250]
gi|419770889|ref|ZP_14296951.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus IS-K]
gi|420172741|ref|ZP_14679239.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM067]
gi|420182929|ref|ZP_14689062.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM049]
gi|420187536|ref|ZP_14693556.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM039]
gi|420194003|ref|ZP_14699832.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM021]
gi|420197150|ref|ZP_14702874.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM020]
gi|420202027|ref|ZP_14707622.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM018]
gi|420206421|ref|ZP_14711931.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM008]
gi|420211850|ref|ZP_14717206.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM001]
gi|420214261|ref|ZP_14719540.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH05005]
gi|420216091|ref|ZP_14721313.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH05001]
gi|420220041|ref|ZP_14725031.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH04008]
gi|420221949|ref|ZP_14726874.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH08001]
gi|420224811|ref|ZP_14729649.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH06004]
gi|420227050|ref|ZP_14731823.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH05003]
gi|420229373|ref|ZP_14734079.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH04003]
gi|420234419|ref|ZP_14738982.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH051475]
gi|421607239|ref|ZP_16048485.1| undecaprenyl pyrophosphate synthase [Staphylococcus epidermidis
AU12-03]
gi|42559968|sp|Q8CPG7.1|ISPT_STAES RecName: Full=Isoprenyl transferase
gi|73920279|sp|Q5HPT1.1|ISPT_STAEQ RecName: Full=Isoprenyl transferase
gi|27315399|gb|AAO04533.1|AE016747_30 undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
ATCC 12228]
gi|57637392|gb|AAW54180.1| undecaprenyl diphosphate synthase [Staphylococcus epidermidis
RP62A]
gi|251805851|gb|EES58508.1| Di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295333|gb|EFA87860.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis SK135]
gi|291319077|gb|EFE59447.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329736327|gb|EGG72599.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU028]
gi|329736625|gb|EGG72891.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU045]
gi|341652413|gb|EGS76201.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU037]
gi|341655043|gb|EGS78779.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU105]
gi|341655767|gb|EGS79491.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU109]
gi|374402474|gb|EHQ73499.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU041]
gi|374403857|gb|EHQ74852.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU057]
gi|374406206|gb|EHQ77109.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU065]
gi|374410246|gb|EHQ81007.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU081]
gi|374820015|gb|EHR84129.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU117]
gi|374820607|gb|EHR84683.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU120]
gi|374827516|gb|EHR91378.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU123]
gi|374827626|gb|EHR91487.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU125]
gi|374831249|gb|EHR94991.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU126]
gi|374834927|gb|EHR98558.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU127]
gi|383361020|gb|EID38403.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus IS-250]
gi|383362438|gb|EID39790.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus aureus
subsp. aureus IS-K]
gi|394241418|gb|EJD86832.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM067]
gi|394249392|gb|EJD94605.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM049]
gi|394255978|gb|EJE00914.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM039]
gi|394265957|gb|EJE10603.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM020]
gi|394266701|gb|EJE11326.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM021]
gi|394270000|gb|EJE14523.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM018]
gi|394278260|gb|EJE22577.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM008]
gi|394280360|gb|EJE24641.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM001]
gi|394283626|gb|EJE27791.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH05005]
gi|394287048|gb|EJE31022.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH04008]
gi|394289980|gb|EJE33850.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH08001]
gi|394292541|gb|EJE36283.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH05001]
gi|394294214|gb|EJE37900.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH06004]
gi|394297551|gb|EJE41148.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH05003]
gi|394299139|gb|EJE42690.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH04003]
gi|394304222|gb|EJE47629.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH051475]
gi|406657031|gb|EKC83424.1| undecaprenyl pyrophosphate synthase [Staphylococcus epidermidis
AU12-03]
Length = 256
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|407000739|gb|EKE17943.1| hypothetical protein ACD_10C00203G0006 [uncultured bacterium]
Length = 253
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+E ++ M AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 173 DLESYLSMNFAPEPDLFIRTGGEQRISNFLLWQLAYTELYFTPTLW 218
>gi|15644150|ref|NP_229199.1| undecaprenyl pyrophosphate synthase [Thermotoga maritima MSB8]
gi|418045455|ref|ZP_12683550.1| Undecaprenyl pyrophosphate synthase [Thermotoga maritima MSB8]
gi|42560019|sp|Q9X1B8.1|ISPT_THEMA RecName: Full=Isoprenyl transferase
gi|4981961|gb|AAD36469.1|AE001792_9 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351676340|gb|EHA59493.1| Undecaprenyl pyrophosphate synthase [Thermotoga maritima MSB8]
Length = 233
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
D S K ++ E+T ++ ++++ PDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 147 DVSHGKKIELTEETFRQ------YLYLPDVPDPDLIIRTSGEMRLSNFLLWQSAYSELYF 200
Query: 91 PAALW 95
LW
Sbjct: 201 FKKLW 205
>gi|456389140|gb|EMF54580.1| uppS1 protein [Streptomyces bottropensis ATCC 25435]
Length = 257
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
+DK + L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AQDKGTSIEELAESVDIDMIGR------HLYTVDQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCDVFW 233
>gi|420231731|ref|ZP_14736376.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH051668]
gi|394302273|gb|EJE45721.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIH051668]
Length = 256
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|297559084|ref|YP_003678058.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296843532|gb|ADH65552.1| undecaprenyl diphosphate synthase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 253
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 11/69 (15%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN--- 85
K G Q L E++D + D+ +H++ PDPD+ IR+SGE R S F+LWQ+ +
Sbjct: 169 KGTGIQELAERLD------IEDIARHLYTRGQPDPDLLIRTSGEQRLSGFMLWQSVHSEF 222
Query: 86 --CSLYSPA 92
C +Y PA
Sbjct: 223 YFCEVYWPA 231
>gi|150021159|ref|YP_001306513.1| undecaprenyl diphosphate synthase [Thermosipho melanesiensis BI429]
gi|149793680|gb|ABR31128.1| undecaprenyl diphosphate synthase [Thermosipho melanesiensis BI429]
Length = 225
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++IDE+T +K ++ PDPD+ IR+SGE R SNFL WQ++ LY LW
Sbjct: 147 QKEIDEETFRKF------LYRPEVPDPDLIIRTSGEMRLSNFLTWQSAYSELYFTDVLW 199
>gi|29829779|ref|NP_824413.1| UDP pyrophosphate synthase [Streptomyces avermitilis MA-4680]
gi|42559954|sp|Q82IC1.1|ISPT1_STRAW RecName: Full=Isoprenyl transferase 1
gi|29606888|dbj|BAC70948.1| putative undecaprenyl diphosphate synthase [Streptomyces
avermitilis MA-4680]
Length = 257
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L + +D D I K H++ PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 180 LADAVDVDLIGK------HLYTGAQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFW 233
>gi|374599809|ref|ZP_09672811.1| Undecaprenyl pyrophosphate synthase [Myroides odoratus DSM 2801]
gi|423324966|ref|ZP_17302807.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CIP 103059]
gi|373911279|gb|EHQ43128.1| Undecaprenyl pyrophosphate synthase [Myroides odoratus DSM 2801]
gi|404606975|gb|EKB06509.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CIP 103059]
Length = 246
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I ED I + + + +H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 162 ISEDNIDESI-INEHLYTHNMPDVDLLIRTSGEQRISNFLLWQIAYAELYFTEVLW 216
>gi|440683784|ref|YP_007158579.1| Undecaprenyl pyrophosphate synthetase [Anabaena cylindrica PCC
7122]
gi|428680903|gb|AFZ59669.1| Undecaprenyl pyrophosphate synthetase [Anabaena cylindrica PCC
7122]
Length = 249
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK--KLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
++ L +A+ +K+ E +K ++ + E H++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 152 QEILQACRAIAQKVQEGLLKPEEISEQVFEAHLYTAGIADPDLLIRTSGEMRLSNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYGEIYITDTLW 224
>gi|425059516|ref|ZP_18462852.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
504]
gi|403034798|gb|EJY46225.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
504]
Length = 270
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V +QE E+ G + E+ID++ I K H+ P DP++ IR+SGE R
Sbjct: 161 VTAIQEIAEEVAKG-EIHAEEIDDELIAK------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|390559875|ref|ZP_10244154.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Nitrolancetus hollandicus Lb]
gi|390173553|emb|CCF83454.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Nitrolancetus hollandicus Lb]
Length = 278
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V+++++ + P+PD+ IR+SGE R SNFLLWQ + Y P LW
Sbjct: 198 VDRYLYTSDLPEPDLIIRTSGEQRTSNFLLWQAAYAEYYFPPVLW 242
>gi|427726160|ref|YP_007073437.1| undecaprenyl pyrophosphate synthetase [Leptolyngbya sp. PCC 7376]
gi|427357880|gb|AFY40603.1| Undecaprenyl pyrophosphate synthetase [Leptolyngbya sp. PCC 7376]
Length = 247
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIKKL-VD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
++ + QA+ K+ +K + +D + H++ PDPD+ IR+SGE R SNFLLWQ
Sbjct: 146 QELVQACQAIASKVAAGELKPMDIDENIINNHLYTHGIPDPDLLIRTSGEMRLSNFLLWQ 205
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 206 MAYSEIYVTPTLW 218
>gi|261402846|ref|YP_003247070.1| undecaprenyl diphosphate synthase [Methanocaldococcus vulcanius M7]
gi|261369839|gb|ACX72588.1| undecaprenyl diphosphate synthase [Methanocaldococcus vulcanius M7]
Length = 262
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 30 LDGSQALKEKID------EDTIKKLVDVEKHMFMAVAP--DPDITIRSSGETRPSNFLLW 81
+D + + EK+ ED KKL+D +H++ A P +PD+ IR+SGE R SNFL+W
Sbjct: 167 IDAIKKIAEKVKRGEIEPEDINKKLID--EHLYTANLPFPNPDLIIRTSGEERISNFLIW 224
Query: 82 QTSNCSLYSPAALW 95
Q+S LY W
Sbjct: 225 QSSYSELYFCDTYW 238
>gi|409122611|ref|ZP_11222006.1| UDP-pyrophosphate synthetase [Gillisia sp. CBA3202]
Length = 245
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 14 SLILPVPDVQEYCEDKLDGSQALK-EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGE 72
+L L +E D SQ +K E++ D I + + + +H++ PD D+ IR+SGE
Sbjct: 134 TLALSYGSREELIHAVKDISQKVKNEELSLDAIDESI-INQHLYTQNLPDVDLLIRTSGE 192
Query: 73 TRPSNFLLWQTSNCSLYSPAALW 95
R SNFLLWQ + LY LW
Sbjct: 193 QRISNFLLWQIAYAELYFSKILW 215
>gi|302786458|ref|XP_002975000.1| hypothetical protein SELMODRAFT_102749 [Selaginella moellendorffii]
gi|300157159|gb|EFJ23785.1| hypothetical protein SELMODRAFT_102749 [Selaginella moellendorffii]
Length = 310
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+E+H++ A +P PD+ IR+SGETR SNF+LWQ + L LW
Sbjct: 203 SIERHLYTAGSPWPDVLIRTSGETRLSNFMLWQACHSHLAFCNVLW 248
>gi|196229590|ref|ZP_03128455.1| undecaprenyl diphosphate synthase [Chthoniobacter flavus Ellin428]
gi|196226822|gb|EDY21327.1| undecaprenyl diphosphate synthase [Chthoniobacter flavus Ellin428]
Length = 236
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ V+ C + G+ + E +DE + H++ PDPD+ IR+SGE R SNF
Sbjct: 142 IDTVRNLCREAAAGALDI-ESLDEKAFSR------HLYTGNFPDPDLLIRTSGELRLSNF 194
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ S +Y +W
Sbjct: 195 LLWQLSYTEIYVTQKMW 211
>gi|383650050|ref|ZP_09960456.1| UDP pyrophosphate synthase [Streptomyces chartreusis NRRL 12338]
Length = 257
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
+D+ + L E +D D I + H++ + PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AQDRGTSMEELAEAVDIDMIGR------HLYTSDQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCDVFW 233
>gi|145589628|ref|YP_001156225.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048034|gb|ABP34661.1| Undecaprenyl pyrophosphate synthetase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 257
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 175 LQPHLSMAYAPEPDLFIRTGGEQRVSNFLLWQLAYTELYFTDVLW 219
>gi|422475129|ref|ZP_16551586.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL056PA1]
gi|313833263|gb|EFS70977.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL056PA1]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|50842050|ref|YP_055277.1| UDP pyrophosphate synthase [Propionibacterium acnes KPA171202]
gi|289425871|ref|ZP_06427625.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK187]
gi|289426694|ref|ZP_06428422.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J165]
gi|295130133|ref|YP_003580796.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK137]
gi|335050967|ref|ZP_08543911.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium sp. 409-HC1]
gi|335053660|ref|ZP_08546493.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium sp. 434-HC2]
gi|342211369|ref|ZP_08704094.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium sp.
CC003-HC2]
gi|354606536|ref|ZP_09024506.1| hypothetical protein HMPREF1003_01073 [Propionibacterium sp.
5_U_42AFAA]
gi|365962278|ref|YP_004943844.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365964522|ref|YP_004946087.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365973458|ref|YP_004955017.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes TypeIA2 P.acn33]
gi|386023517|ref|YP_005941820.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes 266]
gi|387502942|ref|YP_005944171.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes 6609]
gi|407934944|ref|YP_006850586.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
C1]
gi|417929669|ref|ZP_12573053.1| undecaprenyl pyrophosphate synthase domain protein
[Propionibacterium acnes SK182]
gi|419420777|ref|ZP_13961006.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes PRP-38]
gi|422385383|ref|ZP_16465518.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA3]
gi|422388003|ref|ZP_16468106.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA2]
gi|422393588|ref|ZP_16473641.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL099PA1]
gi|422395951|ref|ZP_16475982.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL097PA1]
gi|422426105|ref|ZP_16503032.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA1]
gi|422428573|ref|ZP_16505484.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA1]
gi|422430339|ref|ZP_16507223.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA2]
gi|422435238|ref|ZP_16512095.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA2]
gi|422437589|ref|ZP_16514433.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL092PA1]
gi|422443062|ref|ZP_16519860.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA1]
gi|422446904|ref|ZP_16523648.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA1]
gi|422448580|ref|ZP_16525305.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA3]
gi|422452339|ref|ZP_16529040.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA2]
gi|422454926|ref|ZP_16531606.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA3]
gi|422455672|ref|ZP_16532341.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA1]
gi|422461394|ref|ZP_16538018.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL038PA1]
gi|422477588|ref|ZP_16554011.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL007PA1]
gi|422480146|ref|ZP_16556549.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA1]
gi|422482630|ref|ZP_16559019.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA1]
gi|422485887|ref|ZP_16562249.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA2]
gi|422487254|ref|ZP_16563589.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA2]
gi|422491229|ref|ZP_16567544.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL020PA1]
gi|422492815|ref|ZP_16569115.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL086PA1]
gi|422496258|ref|ZP_16572545.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA1]
gi|422499006|ref|ZP_16575278.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA3]
gi|422500819|ref|ZP_16577073.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA2]
gi|422502816|ref|ZP_16579061.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA2]
gi|422506758|ref|ZP_16582981.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA2]
gi|422507627|ref|ZP_16583808.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA2]
gi|422512615|ref|ZP_16588743.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA2]
gi|422515761|ref|ZP_16591870.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA2]
gi|422519333|ref|ZP_16595393.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL074PA1]
gi|422521380|ref|ZP_16597410.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL045PA1]
gi|422524891|ref|ZP_16600900.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA2]
gi|422525974|ref|ZP_16601974.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA1]
gi|422529210|ref|ZP_16605178.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA1]
gi|422532858|ref|ZP_16608804.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA1]
gi|422533827|ref|ZP_16609756.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA1]
gi|422537858|ref|ZP_16613746.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL078PA1]
gi|422539947|ref|ZP_16615820.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA1]
gi|422542390|ref|ZP_16618240.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA1]
gi|422545921|ref|ZP_16621751.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA1]
gi|422547336|ref|ZP_16623152.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA3]
gi|422549178|ref|ZP_16624978.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA1]
gi|422552732|ref|ZP_16628523.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA3]
gi|422555408|ref|ZP_16631177.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA2]
gi|422556306|ref|ZP_16632060.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA2]
gi|422561464|ref|ZP_16637151.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA1]
gi|422563559|ref|ZP_16639236.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA1]
gi|422569155|ref|ZP_16644773.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA2]
gi|422569458|ref|ZP_16645065.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL067PA1]
gi|422579174|ref|ZP_16654698.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA4]
gi|50839652|gb|AAT82319.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes
KPA171202]
gi|289153814|gb|EFD02521.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK187]
gi|289160020|gb|EFD08196.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J165]
gi|291375726|gb|ADD99580.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes SK137]
gi|313764006|gb|EFS35370.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA1]
gi|313771463|gb|EFS37429.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL074PA1]
gi|313791663|gb|EFS39781.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA1]
gi|313802251|gb|EFS43477.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA2]
gi|313808123|gb|EFS46597.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA2]
gi|313811410|gb|EFS49124.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA1]
gi|313812593|gb|EFS50307.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA1]
gi|313818890|gb|EFS56604.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA2]
gi|313820717|gb|EFS58431.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA1]
gi|313822516|gb|EFS60230.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA2]
gi|313825688|gb|EFS63402.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA1]
gi|313828030|gb|EFS65744.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL063PA2]
gi|313830835|gb|EFS68549.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL007PA1]
gi|313839019|gb|EFS76733.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL086PA1]
gi|314915038|gb|EFS78869.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA4]
gi|314918631|gb|EFS82462.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA1]
gi|314920439|gb|EFS84270.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA3]
gi|314925632|gb|EFS89463.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL036PA3]
gi|314932113|gb|EFS95944.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL067PA1]
gi|314954621|gb|EFS99027.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA1]
gi|314958580|gb|EFT02682.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA1]
gi|314959816|gb|EFT03918.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA2]
gi|314962389|gb|EFT06490.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA1]
gi|314968340|gb|EFT12439.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA1]
gi|314973723|gb|EFT17819.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA1]
gi|314976370|gb|EFT20465.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL045PA1]
gi|314979199|gb|EFT23293.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA2]
gi|314983347|gb|EFT27439.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA1]
gi|314986754|gb|EFT30846.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA2]
gi|314989495|gb|EFT33586.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL005PA3]
gi|315077476|gb|EFT49536.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL053PA2]
gi|315080219|gb|EFT52195.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL078PA1]
gi|315084101|gb|EFT56077.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL027PA2]
gi|315085303|gb|EFT57279.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL002PA3]
gi|315089082|gb|EFT61058.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL072PA1]
gi|315096498|gb|EFT68474.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL038PA1]
gi|315100855|gb|EFT72831.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL046PA1]
gi|315107207|gb|EFT79183.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA1]
gi|315108073|gb|EFT80049.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL030PA2]
gi|327326748|gb|EGE68531.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA2]
gi|327330555|gb|EGE72302.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL096PA3]
gi|327331074|gb|EGE72814.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL097PA1]
gi|327443051|gb|EGE89705.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA1]
gi|327445174|gb|EGE91828.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL043PA2]
gi|327446892|gb|EGE93546.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL013PA2]
gi|327450155|gb|EGE96809.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA3]
gi|327455118|gb|EGF01773.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL092PA1]
gi|327455288|gb|EGF01943.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL083PA2]
gi|328752568|gb|EGF66184.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL020PA1]
gi|328752821|gb|EGF66437.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL087PA1]
gi|328759256|gb|EGF72872.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL025PA2]
gi|328760257|gb|EGF73830.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL099PA1]
gi|332674973|gb|AEE71789.1| undecaprenyl pyrophosphate synthase [Propionibacterium acnes 266]
gi|333766537|gb|EGL43833.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium sp. 434-HC2]
gi|333768452|gb|EGL45638.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium sp. 409-HC1]
gi|335276987|gb|AEH28892.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes 6609]
gi|340766913|gb|EGR89438.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium sp.
CC003-HC2]
gi|340773792|gb|EGR96284.1| undecaprenyl pyrophosphate synthase domain protein
[Propionibacterium acnes SK182]
gi|353556651|gb|EHC26020.1| hypothetical protein HMPREF1003_01073 [Propionibacterium sp.
5_U_42AFAA]
gi|365738959|gb|AEW83161.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365741203|gb|AEW80897.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365743457|gb|AEW78654.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes TypeIA2 P.acn33]
gi|379979151|gb|EIA12475.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes PRP-38]
gi|407903525|gb|AFU40355.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes C1]
gi|456740150|gb|EMF64681.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
FZ1/2/0]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|345794447|ref|XP_003433904.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 1 [Canis
lupus familiaris]
Length = 299
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ + E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVRATKHYNNDVSESLL------DKCLYTNHSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+C L LW
Sbjct: 179 SDFLLWQTSHCCLVFQPVLW 198
>gi|290957833|ref|YP_003489015.1| UDP pyrophosphate synthetase [Streptomyces scabiei 87.22]
gi|260647359|emb|CBG70464.1| Putative undecaprenyl pyrophosphate synthetase [Streptomyces
scabiei 87.22]
Length = 257
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
DK + L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++
Sbjct: 170 AHDKGTSMEELAESVDIDMIGR------HLYTVDQPDPDLVIRTSGEQRLSGFMLWQTAH 223
Query: 86 CSLYSPAALW 95
Y W
Sbjct: 224 SEYYFCDVFW 233
>gi|121729974|ref|ZP_01682392.1| flagellar protein FliG [Vibrio cholerae V52]
gi|121628278|gb|EAX60790.1| flagellar protein FliG [Vibrio cholerae V52]
Length = 167
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 61 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 120
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 121 AYAEMYFTPVFW 132
>gi|386071896|ref|YP_005986792.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes ATCC 11828]
gi|353456262|gb|AER06781.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes ATCC 11828]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|422432707|ref|ZP_16509575.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA2]
gi|422511755|ref|ZP_16587895.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA1]
gi|313814867|gb|EFS52581.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA1]
gi|315098905|gb|EFT70881.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL059PA2]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|282854468|ref|ZP_06263805.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J139]
gi|422467741|ref|ZP_16544292.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA4]
gi|422470474|ref|ZP_16546995.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA3]
gi|282583921|gb|EFB89301.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes J139]
gi|314980829|gb|EFT24923.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA3]
gi|315090284|gb|EFT62260.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL110PA4]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|403738657|ref|ZP_10951258.1| undecaprenyl pyrophosphate synthase [Austwickia chelonae NBRC
105200]
gi|403191307|dbj|GAB78028.1| undecaprenyl pyrophosphate synthase [Austwickia chelonae NBRC
105200]
Length = 253
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ D+ H++ PDPD+ IR+SGE R FLLWQ+++ LY A W
Sbjct: 182 VTDIADHLYTKGQPDPDLVIRTSGEQRIGGFLLWQSTHSELYFCEAFW 229
>gi|261400101|ref|ZP_05986226.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria lactamica
ATCC 23970]
gi|313667489|ref|YP_004047773.1| undecaprenyl diphosphate synthase [Neisseria lactamica 020-06]
gi|269210328|gb|EEZ76783.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria lactamica
ATCC 23970]
gi|313004951|emb|CBN86378.1| putative undecaprenyl diphosphate synthase [Neisseria lactamica
020-06]
Length = 248
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 5 DDVQPLKINSLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVD--VEKHMFMAVAPD 62
++ + L N+ L + +Y + D QA ++ D + ++ + + K++ + AP+
Sbjct: 122 EEAEALTANNTGLTLSIAADYG-GRWDILQA-ANRLLADGVSEITEDMLAKYLMLGDAPE 179
Query: 63 PDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 180 PDLFIRTGGETRISNFLLWQMAYAELYFTDILW 212
>gi|153831278|ref|ZP_01983945.1| undecaprenyl diphosphate synthase [Vibrio cholerae 623-39]
gi|148873236|gb|EDL71371.1| undecaprenyl diphosphate synthase [Vibrio cholerae 623-39]
Length = 256
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 150 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 209
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 210 AYAEMYFTPVFW 221
>gi|16332030|ref|NP_442758.1| UDP pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383323773|ref|YP_005384627.1| hypothetical protein SYNGTI_2865 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326942|ref|YP_005387796.1| hypothetical protein SYNPCCP_2864 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492826|ref|YP_005410503.1| hypothetical protein SYNPCCN_2864 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384438094|ref|YP_005652819.1| hypothetical protein SYNGTS_2866 [Synechocystis sp. PCC 6803]
gi|451816182|ref|YP_007452634.1| hypothetical protein MYO_128920 [Synechocystis sp. PCC 6803]
gi|2501568|sp|Q55482.1|ISPT_SYNY3 RecName: Full=Isoprenyl transferase
gi|1001342|dbj|BAA10829.1| sll0506 [Synechocystis sp. PCC 6803]
gi|339275127|dbj|BAK51614.1| hypothetical protein SYNGTS_2866 [Synechocystis sp. PCC 6803]
gi|359273093|dbj|BAL30612.1| hypothetical protein SYNGTI_2865 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359276263|dbj|BAL33781.1| hypothetical protein SYNPCCN_2864 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279433|dbj|BAL36950.1| hypothetical protein SYNPCCP_2864 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960333|dbj|BAM53573.1| UDP pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451782151|gb|AGF53120.1| hypothetical protein MYO_128920 [Synechocystis sp. PCC 6803]
Length = 249
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
K+D +TI + V VEK+++ PD+ IR+SGE R SNFLLWQ + +Y + LW
Sbjct: 169 KLDPETIDEGV-VEKYLYTEGLSHPDLLIRTSGELRISNFLLWQMAYAEIYVTSTLW 224
>gi|114331997|ref|YP_748219.1| undecaprenyl diphosphate synthase [Nitrosomonas eutropha C91]
gi|114309011|gb|ABI60254.1| Undecaprenyl pyrophosphate synthetase [Nitrosomonas eutropha C91]
Length = 263
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +++ MA AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 173 DLSRYLTMADAPEPDLFIRTGGECRISNFLLWQLAYTELYFTDTLW 218
>gi|422391134|ref|ZP_16471229.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL103PA1]
gi|422459999|ref|ZP_16536647.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA2]
gi|422464561|ref|ZP_16541169.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL060PA1]
gi|422565224|ref|ZP_16640875.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA2]
gi|422576416|ref|ZP_16651954.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL001PA1]
gi|314922872|gb|EFS86703.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL001PA1]
gi|314966302|gb|EFT10401.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL082PA2]
gi|315093467|gb|EFT65443.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL060PA1]
gi|315103023|gb|EFT74999.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL050PA2]
gi|327327083|gb|EGE68864.1| undecaprenyl diphosphate synthase [Propionibacterium acnes
HL103PA1]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|153803008|ref|ZP_01957594.1| undecaprenyl diphosphate synthase [Vibrio cholerae MZO-3]
gi|297580899|ref|ZP_06942824.1| undecaprenyl diphosphate synthase [Vibrio cholerae RC385]
gi|124121451|gb|EAY40194.1| undecaprenyl diphosphate synthase [Vibrio cholerae MZO-3]
gi|297534725|gb|EFH73561.1| undecaprenyl diphosphate synthase [Vibrio cholerae RC385]
Length = 256
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 150 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 209
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 210 AYAEMYFTPVFW 221
>gi|390441791|ref|ZP_10229822.1| Undecaprenyl pyrophosphate synthase [Microcystis sp. T1-4]
gi|389834845|emb|CCI33948.1| Undecaprenyl pyrophosphate synthase [Microcystis sp. T1-4]
Length = 249
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE E++++ A P+PD+ IRSSGE R SNFLLWQ + +Y LW
Sbjct: 173 EAIDESLF------EQYLYTAGIPNPDLLIRSSGEMRISNFLLWQMAYAEIYVTDTLW 224
>gi|395203637|ref|ZP_10394766.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium humerusii P08]
gi|422440484|ref|ZP_16517298.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA3]
gi|422471609|ref|ZP_16548109.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA2]
gi|422572218|ref|ZP_16647788.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL044PA1]
gi|313837028|gb|EFS74742.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA2]
gi|314929384|gb|EFS93215.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL044PA1]
gi|314971532|gb|EFT15630.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium acnes HL037PA3]
gi|328907906|gb|EGG27668.1| putative di-trans,poly-cis-decaprenylcistransferase
[Propionibacterium humerusii P08]
Length = 273
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|428313893|ref|YP_007124870.1| undecaprenyl pyrophosphate synthetase [Microcoleus sp. PCC 7113]
gi|428255505|gb|AFZ21464.1| Undecaprenyl pyrophosphate synthetase [Microcoleus sp. PCC 7113]
Length = 249
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ L +A+ K+ + I+ + +D +H++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 152 EEILQACRAIATKVQQGQIQPEDIDQAMFSRHLYTADLCDPDLLIRTSGEMRLSNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y ALW
Sbjct: 212 MAYAEIYITEALW 224
>gi|424903701|ref|ZP_18327214.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
MSMB43]
gi|390931574|gb|EIP88975.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
MSMB43]
Length = 245
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++DED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 154 EVDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTFW 204
>gi|383782604|ref|YP_005467171.1| putative undecaprenyl diphosphate synthase [Actinoplanes
missouriensis 431]
gi|381375837|dbj|BAL92655.1| putative undecaprenyl diphosphate synthase [Actinoplanes
missouriensis 431]
Length = 257
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 45 IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +++DVE +H++ PDPD+ IR+SGE R S FLLWQ++N Y A W
Sbjct: 180 LAEILDVEHIAEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSANSEFYFHDANW 233
>gi|359447984|ref|ZP_09237540.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20480]
gi|392538747|ref|ZP_10285884.1| UDP pyrophosphate synthetase [Pseudoalteromonas marina mano4]
gi|358046208|dbj|GAA73789.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20480]
Length = 259
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +HM MA P+PD+ IR+ G+ R SNFLLWQ + LY LW
Sbjct: 179 IAQHMSMADQPEPDLLIRTGGDVRISNFLLWQAAYAELYFTETLW 223
>gi|158520495|ref|YP_001528365.1| undecaprenyl diphosphate synthase [Desulfococcus oleovorans Hxd3]
gi|158509321|gb|ABW66288.1| undecaprenyl diphosphate synthase [Desulfococcus oleovorans Hxd3]
Length = 247
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 35 ALKEKIDEDTIKKLVDVE--------KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
A +I D + +DV+ ++++ PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 154 AATRRIAADVVAGRIDVKDVDEALVSRYLYTHDMPDPDLMIRTSGEMRISNFLLWQLAYA 213
Query: 87 SLYSPAALW 95
LY LW
Sbjct: 214 ELYVTPTLW 222
>gi|320159760|ref|YP_004172984.1| undecaprenyl pyrophosphate synthetase [Anaerolinea thermophila
UNI-1]
gi|319993613|dbj|BAJ62384.1| undecaprenyl pyrophosphate synthetase [Anaerolinea thermophila
UNI-1]
Length = 249
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V +++F A PDPD+ IR+SGE R SNFL+WQ++ Y LW
Sbjct: 169 VSRYLFTADLPDPDLIIRTSGEMRVSNFLIWQSAYSEWYVTPVLW 213
>gi|328543715|ref|YP_004303824.1| UDP pyrophosphate synthetase [Polymorphum gilvum SL003B-26A1]
gi|326413459|gb|ADZ70522.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Polymorphum gilvum SL003B-26A1]
Length = 231
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+ ED G + E I ED I + +D A PDPD+ IR+SGE R SNF
Sbjct: 132 VRAVKALAEDVAQG-RLRPEAITEDDISRRLDT------AGIPDPDLIIRTSGELRLSNF 184
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + Y LW
Sbjct: 185 LLWQAAYTEFYFSPVLW 201
>gi|226365327|ref|YP_002783110.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
gi|226243817|dbj|BAH54165.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus opacus
B4]
Length = 255
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
VQ +KL A E + T+ ++ H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 161 VQSLLSEKLLAGLAGDELVKSITVDG---IDGHLYTSGQPDPDLVIRTSGEQRLSGFLLW 217
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ ++ A W E ++
Sbjct: 218 QSAYSEIWFTEAYWPEFRR 236
>gi|419830705|ref|ZP_14354190.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HC-1A2]
gi|419834388|ref|ZP_14357843.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-61A2]
gi|422911094|ref|ZP_16945722.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-09]
gi|422918094|ref|ZP_16952412.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-02A1]
gi|423822996|ref|ZP_17717006.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-55C2]
gi|423856961|ref|ZP_17720813.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-59A1]
gi|423883589|ref|ZP_17724400.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-60A1]
gi|423998519|ref|ZP_17741771.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-02C1]
gi|424017416|ref|ZP_17757245.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-55B2]
gi|424020341|ref|ZP_17760124.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-59B1]
gi|424625715|ref|ZP_18064176.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-50A1]
gi|424630203|ref|ZP_18068487.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-51A1]
gi|424634247|ref|ZP_18072347.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-52A1]
gi|424637324|ref|ZP_18075332.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-55A1]
gi|424641232|ref|ZP_18079115.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-56A1]
gi|424649300|ref|ZP_18086963.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-57A1]
gi|424660758|ref|ZP_18098005.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-16]
gi|443528217|ref|ZP_21094261.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-78A1]
gi|341632466|gb|EGS57332.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-09]
gi|341636976|gb|EGS61670.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-02A1]
gi|408011656|gb|EKG49463.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-50A1]
gi|408017610|gb|EKG55101.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-52A1]
gi|408022717|gb|EKG59912.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-56A1]
gi|408023112|gb|EKG60292.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-55A1]
gi|408032016|gb|EKG68615.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-57A1]
gi|408050131|gb|EKG85304.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-16]
gi|408054171|gb|EKG89157.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-51A1]
gi|408620478|gb|EKK93490.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HC-1A2]
gi|408634972|gb|EKL07207.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-55C2]
gi|408640308|gb|EKL12104.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-59A1]
gi|408640655|gb|EKL12443.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-60A1]
gi|408649210|gb|EKL20527.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-61A2]
gi|408852418|gb|EKL92246.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-02C1]
gi|408859544|gb|EKL99201.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-55B2]
gi|408866918|gb|EKM06289.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-59B1]
gi|443453475|gb|ELT17298.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-78A1]
Length = 250
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 204 AYAEMYFTPVFW 215
>gi|440754237|ref|ZP_20933439.1| di-trans,poly-cis-decaprenylcistransferase [Microcystis aeruginosa
TAIHU98]
gi|440174443|gb|ELP53812.1| di-trans,poly-cis-decaprenylcistransferase [Microcystis aeruginosa
TAIHU98]
Length = 249
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE E++++ A P+PD+ IRSSGE R SNFLLWQ + +Y LW
Sbjct: 173 EAIDESLF------EQYLYTAGIPNPDLLIRSSGEMRISNFLLWQMAYAEIYVTDTLW 224
>gi|417932459|ref|ZP_12575799.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK182B-JCVI]
gi|340774555|gb|EGR97039.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium acnes
SK182B-JCVI]
Length = 273
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+E H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IEDHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|359424566|ref|ZP_09215679.1| undecaprenyl pyrophosphate synthase [Gordonia amarae NBRC 15530]
gi|358240166|dbj|GAB05261.1| undecaprenyl pyrophosphate synthase [Gordonia amarae NBRC 15530]
Length = 260
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ ++ +++E I+ T++ ++++++ PDPD+ IR+SGE R S F
Sbjct: 163 VDAVQALLRERAAAGDSVEEMIEAVTVEA---IDRNLYTGGQPDPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|218296044|ref|ZP_03496813.1| undecaprenyl diphosphate synthase [Thermus aquaticus Y51MC23]
gi|218243421|gb|EED09950.1| undecaprenyl diphosphate synthase [Thermus aquaticus Y51MC23]
Length = 263
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
++ K ++ A PDPD IR+SGE R S FLLWQ++ Y LW E +K
Sbjct: 194 EIGKRLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|229524259|ref|ZP_04413664.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae bv. albensis
VL426]
gi|229337840|gb|EEO02857.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae bv. albensis
VL426]
Length = 250
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 204 AYAEMYFTPVFW 215
>gi|213965509|ref|ZP_03393704.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
gi|213951893|gb|EEB63280.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
amycolatum SK46]
Length = 261
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++E + +D S+ L+E+I D I + ++ + PDPD+ IR+SGE R S FLLW
Sbjct: 171 IRESVAEGIDASE-LEERITTDAISR------RLYTSGQPDPDLVIRTSGEQRLSGFLLW 223
Query: 82 QTSNCSLYSPAALWLEEKK 100
QT+ ++ W E ++
Sbjct: 224 QTAYSEIWFTDTYWPEFRR 242
>gi|167837037|ref|ZP_02463920.1| undecaprenyl diphosphate synthase [Burkholderia thailandensis
MSMB43]
Length = 260
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++DED + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 EVDEDAFAR------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTFW 219
>gi|424591963|ref|ZP_18031387.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1037(10)]
gi|408029977|gb|EKG66658.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1037(10)]
Length = 250
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 204 AYAEMYFTPVFW 215
>gi|304384316|ref|ZP_07366727.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella marshii DSM
16973]
gi|304334632|gb|EFM00914.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella marshii DSM
16973]
Length = 245
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
+G AL E IDE+ V KH+ A PDP++ IR+ GE R SNFLLWQ + LY
Sbjct: 155 EGQMAL-EAIDEEA------VTKHLNTAFMPDPELLIRTGGELRISNFLLWQIAYAELYF 207
Query: 91 PAALW 95
W
Sbjct: 208 CDTYW 212
>gi|229513898|ref|ZP_04403360.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TMA 21]
gi|229522202|ref|ZP_04411619.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80]
gi|229528741|ref|ZP_04418131.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae 12129(1)]
gi|384425219|ref|YP_005634577.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae LMA3984-4]
gi|417821587|ref|ZP_12468201.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE39]
gi|417825490|ref|ZP_12472078.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE48]
gi|419837963|ref|ZP_14361401.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-46B1]
gi|421351975|ref|ZP_15802340.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-25]
gi|421354955|ref|ZP_15805287.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-45]
gi|422308196|ref|ZP_16395349.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1035(8)]
gi|422923559|ref|ZP_16956706.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae BJG-01]
gi|423735920|ref|ZP_17709112.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-41B1]
gi|423957562|ref|ZP_17735305.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-40]
gi|423985542|ref|ZP_17738856.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-46]
gi|424010258|ref|ZP_17753192.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-44C1]
gi|429888043|ref|ZP_19369542.1| Undecaprenyl pyrophosphate synthetase [Vibrio cholerae PS15]
gi|229332515|gb|EEN98001.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae 12129(1)]
gi|229341127|gb|EEO06132.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TM 11079-80]
gi|229349079|gb|EEO14036.1| undecaprenyl pyrophosphate synthetase [Vibrio cholerae TMA 21]
gi|327484772|gb|AEA79179.1| Undecaprenyl pyrophosphate synthetase [Vibrio cholerae LMA3984-4]
gi|340039218|gb|EGR00193.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE39]
gi|340046975|gb|EGR07905.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE48]
gi|341643848|gb|EGS68110.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae BJG-01]
gi|395952420|gb|EJH63034.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-25]
gi|395954080|gb|EJH64693.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-45]
gi|408618061|gb|EKK91150.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
CP1035(8)]
gi|408629346|gb|EKL02045.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-41B1]
gi|408656519|gb|EKL27613.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-40]
gi|408663659|gb|EKL34521.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae HE-46]
gi|408856511|gb|EKL96206.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-46B1]
gi|408863288|gb|EKM02778.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-44C1]
gi|429224919|gb|EKY31227.1| Undecaprenyl pyrophosphate synthetase [Vibrio cholerae PS15]
Length = 250
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 204 AYAEMYFTPVFW 215
>gi|392940943|ref|ZP_10306587.1| undecaprenyl diphosphate synthase [Thermoanaerobacter siderophilus
SR4]
gi|392292693|gb|EIW01137.1| undecaprenyl diphosphate synthase [Thermoanaerobacter siderophilus
SR4]
Length = 249
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ C L+ +++E I E TI ++++ PDPD+ IR+SGE R SNF
Sbjct: 155 VKAVKKICTKILNNELSIEE-ITEQTI------SENLYTKNQPDPDLIIRTSGEKRLSNF 207
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ L+ LW
Sbjct: 208 LLWQSAYSELWFTEVLW 224
>gi|257057126|ref|YP_003134958.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
gi|256586998|gb|ACU98131.1| Undecaprenyl pyrophosphate synthetase [Saccharomonospora viridis
DSM 43017]
Length = 259
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+Q++ E+ Q L E +D D I + H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 169 LQQHAEEGTS-IQQLAETLDVDHIAE------HLYTSGQPDPDLIIRTSGEQRLSGFLLW 221
Query: 82 QTSNCSLYSPAALW 95
Q+++ + A W
Sbjct: 222 QSAHSEFWFTEAYW 235
>gi|225024278|ref|ZP_03713470.1| hypothetical protein EIKCOROL_01153 [Eikenella corrodens ATCC
23834]
gi|224943303|gb|EEG24512.1| hypothetical protein EIKCOROL_01153 [Eikenella corrodens ATCC
23834]
Length = 248
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + + +A AP+PD+ IR+ GETR SNF+LWQ + Y ALW
Sbjct: 167 DLSQRLSLAEAPEPDLFIRTGGETRISNFMLWQMAYAEFYFTDALW 212
>gi|184201411|ref|YP_001855618.1| short-chain Z-isoprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
gi|183581641|dbj|BAG30112.1| short-chain Z-isoprenyl diphosphate synthase [Kocuria rhizophila
DC2201]
Length = 253
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H++ PDPD+ IR+SGE R S FL+WQ++ Y ALW
Sbjct: 184 DISEHLYTRGQPDPDLLIRTSGEQRLSGFLMWQSAYSEFYFCEALW 229
>gi|163753162|ref|ZP_02160286.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Kordia
algicida OT-1]
gi|161326894|gb|EDP98219.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Kordia
algicida OT-1]
Length = 246
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E C + +L E IDE I + H++ PD D+ IR+SGE R SNFLLW
Sbjct: 150 VKEICHKVKNNIISL-ETIDESIINQ------HLYTQNLPDVDLLIRTSGEHRISNFLLW 202
Query: 82 QTSNCSLYSPAALW 95
Q + LY LW
Sbjct: 203 QIAYAELYFTNVLW 216
>gi|373466487|ref|ZP_09557801.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus sp. oral
taxon 851 str. F0397]
gi|371760269|gb|EHO48958.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus sp. oral
taxon 851 str. F0397]
Length = 239
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 11 KINSLILPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKL--VDVEKHMFMAVAPDPDIT 66
K +L L + C D + ++ L EK+ +E +++++ + ++H+ P D+
Sbjct: 125 KNTALTLNIAANYGGCWDIVQATKQLAEKVKNNEMSVEEIDEIAFQRHLVTQDEPPVDLL 184
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNFLLWQT+ LY LW
Sbjct: 185 IRTSGEQRISNFLLWQTAYAELYFSDVLW 213
>gi|389860388|ref|YP_006362627.1| undecaprenyl diphosphate synthase [Thermogladius cellulolyticus
1633]
gi|388525291|gb|AFK50489.1| undecaprenyl diphosphate synthase [Thermogladius cellulolyticus
1633]
Length = 276
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 11/79 (13%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++EY E K+ + I+E+T K ++ + PDPD+ IR+SGE R SNFLLW
Sbjct: 190 IKEYEEGKVG-----LDDINEETFSK------YLMTSDIPDPDLIIRTSGEVRISNFLLW 238
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ LY A W E +K
Sbjct: 239 QSAYSELYFCDAYWPEFRK 257
>gi|377560843|ref|ZP_09790324.1| undecaprenyl pyrophosphate synthase [Gordonia otitidis NBRC 100426]
gi|377522000|dbj|GAB35489.1| undecaprenyl pyrophosphate synthase [Gordonia otitidis NBRC 100426]
Length = 260
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 36 LKEKIDED-TIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L EK DE T+++LVD ++++++ PDPD+ IR+SGE R S FLLWQ++ +
Sbjct: 170 LVEKADEGATVQELVDAVTVEAIDENLYTKGQPDPDLVIRTSGEQRLSGFLLWQSAYSEI 229
Query: 89 YSPAALWLEEKK 100
+ A W E ++
Sbjct: 230 WFTDAYWPEFRR 241
>gi|238026906|ref|YP_002911137.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia glumae
BGR1]
gi|237876100|gb|ACR28433.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia glumae
BGR1]
Length = 260
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 176 EPHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYTEFYFTGKFW 219
>gi|260437175|ref|ZP_05790991.1| di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio crossotus
DSM 2876]
gi|292810488|gb|EFF69693.1| di-trans,poly-cis-decaprenylcistransferase [Butyrivibrio crossotus
DSM 2876]
Length = 244
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E I ED +D A APDPD+ IR+SGE R SNFLLWQ + P LW +
Sbjct: 165 EMITEDMFASYLDT------ADAPDPDLIIRTSGEKRISNFLLWQCAYSEFDFPEVLWPD 218
Query: 98 EKKKR 102
KKR
Sbjct: 219 FNKKR 223
>gi|354612871|ref|ZP_09030810.1| Undecaprenyl pyrophosphate synthase [Saccharomonospora
paurometabolica YIM 90007]
gi|353222748|gb|EHB87046.1| Undecaprenyl pyrophosphate synthase [Saccharomonospora
paurometabolica YIM 90007]
Length = 259
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 34 QALKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
+ L++ DE T + K +DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 167 KVLQQHADEGTSIEELAKTLDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHS 226
Query: 87 SLYSPAALW 95
+ A W
Sbjct: 227 EFWFTEAYW 235
>gi|348618312|ref|ZP_08884841.1| Undecaprenyl pyrophosphate synthase (UPP synthetase) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|348618596|ref|ZP_08885117.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816149|emb|CCD29909.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816444|emb|CCD29552.1| Undecaprenyl pyrophosphate synthase (UPP synthetase) [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 252
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ K++ +A AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 167 ADIAKYLAIAYAPEPDLLIRTGGEQRISNFLLWQLAYTELYFTDTFW 213
>gi|222529796|ref|YP_002573678.1| UDP diphosphate synthase [Caldicellulosiruptor bescii DSM 6725]
gi|222456643|gb|ACM60905.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor bescii DSM
6725]
Length = 248
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E +DED KK +++ PDPD+ IR SGE R SNFLLWQ S + LW +
Sbjct: 171 EDVDEDLFKK------YLYTNEIPDPDLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPD 224
Query: 98 EKK 100
KK
Sbjct: 225 FKK 227
>gi|15606475|ref|NP_213855.1| hypothetical protein aq_1248 [Aquifex aeolicus VF5]
gi|6136141|sp|O67291.1|ISPT_AQUAE RecName: Full=Isoprenyl transferase
gi|2983689|gb|AAC07254.1| hypothetical protein aq_1248 [Aquifex aeolicus VF5]
Length = 231
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
K+DE+T + +D ++ +PDPD+ IR++GE R SNFLLW + LY LW
Sbjct: 153 KLDEETFSQFLD------LSCSPDPDLLIRTAGEKRISNFLLWNLAYTELYFTDTLW 203
>gi|330817435|ref|YP_004361140.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia gladioli
BSR3]
gi|327369828|gb|AEA61184.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia gladioli
BSR3]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 34 QALKEKIDEDTIKKLVDVE-------KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
QA K+ I E +++ +VE +H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 152 QATKKLIAE-AVREGREVEVDETAFAQHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYT 210
Query: 87 SLYSPAALW 95
Y W
Sbjct: 211 EFYFTGKFW 219
>gi|302872258|ref|YP_003840894.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor obsidiansis
OB47]
gi|302575117|gb|ADL42908.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor obsidiansis
OB47]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E +DED KK +++ PDPD+ IR SGE R SNFLLWQ S + LW +
Sbjct: 171 EDVDEDLFKK------YLYTKDIPDPDLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPD 224
Query: 98 EKKK 101
KK+
Sbjct: 225 FKKE 228
>gi|405983847|ref|ZP_11042152.1| di-trans,poly-cis-decaprenylcistransferase [Slackia piriformis YIT
12062]
gi|404388662|gb|EJZ83744.1| di-trans,poly-cis-decaprenylcistransferase [Slackia piriformis YIT
12062]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+ ++ A PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 191 ERGLYTADVPDPDLVIRTSGEMRISNFLLWQVAYSEFYCTDVLW 234
>gi|421344258|ref|ZP_15794661.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-43B1]
gi|395940338|gb|EJH51019.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio cholerae
HC-43B1]
Length = 232
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL EK+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 126 DILQATQALAEKVTQGELQPSDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 185
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 186 AYAEMYFTPVFW 197
>gi|317124136|ref|YP_004098248.1| undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
gi|315588224|gb|ADU47521.1| Undecaprenyl pyrophosphate synthetase [Intrasporangium calvum DSM
43043]
Length = 253
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 21 DVQEYCEDKLDGSQALKEKIDEDTIK-KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
++ + D L A E I++ + ++ D+ +H++ PDPD+ IR+SGE R FL
Sbjct: 154 EIADAVRDMLLEHSARGESIEDIAARLRIEDIAEHLYTKGQPDPDLVIRTSGEQRLGGFL 213
Query: 80 LWQTSNCSLYSPAALW 95
LWQ++ Y A W
Sbjct: 214 LWQSATSEFYFCEAYW 229
>gi|402828183|ref|ZP_10877074.1| di-trans,poly-cis-decaprenylcistransferase [Slackia sp. CM382]
gi|402286784|gb|EJU35246.1| di-trans,poly-cis-decaprenylcistransferase [Slackia sp. CM382]
Length = 259
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+ ++ A PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 190 ERGLYTAGIPDPDLVIRTSGEHRISNFLLWQVAYAEFYVTDVLW 233
>gi|345860694|ref|ZP_08812984.1| di-trans,poly-cis-decaprenylcistransferase [Desulfosporosinus sp.
OT]
gi|344326190|gb|EGW37678.1| di-trans,poly-cis-decaprenylcistransferase [Desulfosporosinus sp.
OT]
Length = 254
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ +D + G Q ++E IDE+ K +F + PDPD+ IR+SGE R SNFLLW
Sbjct: 160 VKKLSKDVISGKQRIEE-IDEERFSKA------LFTSGLPDPDLLIRTSGEMRLSNFLLW 212
Query: 82 QTSNCSLYSPAALW 95
Q + + LW
Sbjct: 213 QLAYTEIVVVEELW 226
>gi|427718419|ref|YP_007066413.1| undecaprenyl pyrophosphate synthetase [Calothrix sp. PCC 7507]
gi|427350855|gb|AFY33579.1| Undecaprenyl pyrophosphate synthetase [Calothrix sp. PCC 7507]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
VEK ++ A P+PD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 173 VEKQLYTADTPEPDLLIRTSGEMRLSNFLLWQMAYTEMYFTDILW 217
>gi|336172549|ref|YP_004579687.1| undecaprenyl pyrophosphate synthase [Lacinutrix sp. 5H-3-7-4]
gi|334727121|gb|AEH01259.1| Undecaprenyl pyrophosphate synthase [Lacinutrix sp. 5H-3-7-4]
Length = 245
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE I + H++ PD D+ IR+SGE R SNFLLWQ + LY +LW
Sbjct: 164 ENIDESIINE------HLYTQNLPDVDLLIRTSGEQRISNFLLWQIAYAELYFTNSLW 215
>gi|428779119|ref|YP_007170905.1| undecaprenyl diphosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428693398|gb|AFZ49548.1| undecaprenyl diphosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 251
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H++ A PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 RQHLYTADLPDPDLLIRTSGEMRISNFLLWQLAYAEIYVTDTLW 224
>gi|302553872|ref|ZP_07306214.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
gi|302471490|gb|EFL34583.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
viridochromogenes DSM 40736]
Length = 257
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ + PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 180 LTEAVDTDMIGR------HLYTSDQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFW 233
>gi|332023727|gb|EGI63951.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 295
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E I+ED I + K +P+PD+ IR+SGETR S+FL+WQ SN +Y LW
Sbjct: 179 LPEDINEDLISDCLYTYK------SPNPDLLIRTSGETRFSDFLMWQISNTCIYFTEVLW 232
>gi|325962612|ref|YP_004240518.1| undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468699|gb|ADX72384.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 257
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E D + + DE T+ D+ + ++ PDPD+ IR+SGE R S F
Sbjct: 160 VDAVRELLHDAVARGADISALADELTVD---DISRFLYTRGQPDPDLVIRTSGEQRLSGF 216
Query: 79 LLWQTSNCSLYSPAALW 95
L+WQ++ Y ALW
Sbjct: 217 LMWQSAYSEFYFCEALW 233
>gi|258654533|ref|YP_003203689.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
gi|258557758|gb|ACV80700.1| undecaprenyl diphosphate synthase [Nakamurella multipartita DSM
44233]
Length = 255
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+ E + ++E ID ++ + +H++ + PDPD+ IR+SGE R S F
Sbjct: 158 VDAVKSMLEAGIKQGHGIQEVIDSLNVET---IGEHLYTSGQPDPDLVIRTSGEQRLSGF 214
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ+++ + A W
Sbjct: 215 LLWQSAHSEFWFCEAYW 231
>gi|87310539|ref|ZP_01092668.1| undecaprenyl pyrophosphate synthetase [Blastopirellula marina DSM
3645]
gi|87286760|gb|EAQ78665.1| undecaprenyl pyrophosphate synthetase [Blastopirellula marina DSM
3645]
Length = 259
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
KI ED I H++ A PDPD+ IR++GE R SNFLLWQ S L+ W E
Sbjct: 175 KITEDAIAA------HLYTAGMPDPDLLIRTAGEMRISNFLLWQISYAELWVTQQCWPE 227
>gi|410098562|ref|ZP_11293539.1| di-trans,poly-cis-decaprenylcistransferase [Parabacteroides
goldsteinii CL02T12C30]
gi|409221864|gb|EKN14812.1| di-trans,poly-cis-decaprenylcistransferase [Parabacteroides
goldsteinii CL02T12C30]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
Q L++KI+ + I + V V H+ PDPD+ IR+ GE R SNFLLWQ S Y
Sbjct: 156 QVLEKKINPNDITETV-VSDHLTTKGIPDPDLLIRTGGEKRISNFLLWQCSYAEFYFTDV 214
Query: 94 LW 95
W
Sbjct: 215 FW 216
>gi|269217143|ref|ZP_06160997.1| di-trans,poly-cis-decaprenylcistransferase [Slackia exigua ATCC
700122]
gi|269129280|gb|EEZ60365.1| di-trans,poly-cis-decaprenylcistransferase [Slackia exigua ATCC
700122]
Length = 259
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+ ++ A PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 190 ERGLYTAGIPDPDLVIRTSGEHRISNFLLWQVAYAEFYVTDVLW 233
>gi|15669562|ref|NP_248375.1| hypothetical protein MJ_1372 [Methanocaldococcus jannaschii DSM
2661]
gi|2501569|sp|Q58767.1|UPPS_METJA RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|1592017|gb|AAB99380.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 280
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 30 LDGSQALKEKID------EDTIKKLVDVEKHMFMAVAP--DPDITIRSSGETRPSNFLLW 81
+D + + EK+ ED K+L+D KH++ A P +PD+ IR+SGE R SNFL+W
Sbjct: 185 IDAVKKIAEKVKRGEIEPEDIDKELID--KHLYTANLPFPNPDLIIRTSGEERISNFLIW 242
Query: 82 QTSNCSLYSPAALW 95
Q+S LY W
Sbjct: 243 QSSYSELYFCDIYW 256
>gi|358446447|ref|ZP_09156993.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium casei
UCMA 3821]
gi|356607621|emb|CCE55319.1| di-trans,poly-cis-decaprenylcistransferase [Corynebacterium casei
UCMA 3821]
Length = 256
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 27 EDKLDGSQAL-KEKIDED-TIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNF 78
++ +D QAL K++++E T ++LVD + KH++ PDPD+ IR+SGE R S F
Sbjct: 156 QEIVDAVQALLKQEVEEGATAEELVDHITVESISKHLYTKGLPDPDLVIRTSGEQRLSGF 215
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + ++ W
Sbjct: 216 LLWQAAYSEIWFTDTYW 232
>gi|418053528|ref|ZP_12691584.1| Undecaprenyl pyrophosphate synthase [Hyphomicrobium denitrificans
1NES1]
gi|353211153|gb|EHB76553.1| Undecaprenyl pyrophosphate synthase [Hyphomicrobium denitrificans
1NES1]
Length = 314
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 43 DTIKKLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
D IK++ + +H++MA PDPD+ IR+SGE R S FLLWQ++ Y W +K
Sbjct: 236 DAIKEVTTTAIGRHLYMAGEPDPDLIIRTSGEIRLSGFLLWQSAYSEFYFCDVPWPALRK 295
>gi|262201612|ref|YP_003272820.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
gi|262084959|gb|ACY20927.1| undecaprenyl diphosphate synthase [Gordonia bronchialis DSM 43247]
Length = 260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+ E++L E ID T++ ++ +++ PDPD+ IR+SGE R S F
Sbjct: 163 VDAVRALLEERLTAGATPAEMIDAVTVEA---IDANLYTKGQPDPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|171463275|ref|YP_001797388.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192813|gb|ACB43774.1| undecaprenyl diphosphate synthase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 257
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 175 LQPHLSMAYAPEPDLFIRTGGEQRISNFLLWQLAYTELYFTDILW 219
>gi|429750846|ref|ZP_19283848.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 332 str. F0381]
gi|429163762|gb|EKY05956.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 332 str. F0381]
Length = 240
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E IDE K+ H++ + PD D+ IR+SGE R SNFLLWQ + LY LW +
Sbjct: 159 ENIDETLFKQ------HLYTSNLPDVDLLIRTSGECRISNFLLWQIAYAELYFTDVLWPD 212
Query: 98 EKKK 101
KK
Sbjct: 213 FTKK 216
>gi|261749607|ref|YP_003257293.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497700|gb|ACX84150.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 246
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
+ H++ PD D+ IR+SGE R SNFLLWQ++ LY LW + +KK F
Sbjct: 177 KNHLYTKEIPDVDLLIRTSGEQRISNFLLWQSAYAELYFTKVLWPDFRKKDFF 229
>gi|302558679|ref|ZP_07311021.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
gi|302476297|gb|EFL39390.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces
griseoflavus Tu4000]
Length = 257
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 180 LAEAVDIDMIGR------HLYTRAQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFW 233
>gi|444335384|ref|YP_007391753.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
gi|444299763|gb|AGD98000.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Blatta
orientalis) str. Tarazona]
Length = 243
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
+ H++ PD D+ IR+SGE R SNFLLWQ++ LY LW + +KK F
Sbjct: 174 KNHLYTKEIPDVDLLIRTSGEQRISNFLLWQSAYAELYFTKVLWPDFRKKDFF 226
>gi|349574986|ref|ZP_08886916.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria shayeganii
871]
gi|348013518|gb|EGY52432.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria shayeganii
871]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + +A AP+PD+ IR+ GETR SNF+LWQ + LY LW
Sbjct: 166 TDLAARLMLAEAPEPDLFIRTGGETRISNFMLWQMAYAELYFTDVLW 212
>gi|332016624|gb|EGI57495.1| Dehydrodolichyl diphosphate synthase [Acromyrmex echinatior]
Length = 239
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 18 PVPDVQEYCEDKLDG---SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETR 74
P ++ +D + G + L E I+ED I + K +P+PDI IR+SGE R
Sbjct: 99 PRDEITHAIKDIIQGVKDNDILLEDINEDLITNCLYTYK------SPNPDILIRTSGEIR 152
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
S+FLLWQ SN +Y LW
Sbjct: 153 LSDFLLWQISNTCIYFIKVLW 173
>gi|225619144|ref|YP_002720370.1| UDP pyrophosphate synthetase [Brachyspira hyodysenteriae WA1]
gi|225213963|gb|ACN82697.1| undecaprenyl pyrophosphate synthetase [Brachyspira hyodysenteriae
WA1]
Length = 240
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ C D ++ + E IDE+ I + +++ PDPD IR+SGE+R SNFL++
Sbjct: 149 IKNICHDTINNKIDI-ENIDENFI------QNYLYTKGIPDPDFIIRTSGESRLSNFLMY 201
Query: 82 QTSNCSLYSPAALW 95
Q S LY LW
Sbjct: 202 QASYSELYFTDILW 215
>gi|428775673|ref|YP_007167460.1| undecaprenyl pyrophosphate synthetase [Halothece sp. PCC 7418]
gi|428689952|gb|AFZ43246.1| Undecaprenyl pyrophosphate synthetase [Halothece sp. PCC 7418]
Length = 251
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H++ A PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 182 QHLYTADLPDPDLLIRTSGEMRLSNFLLWQLAYAEIYVTDTLW 224
>gi|428223963|ref|YP_007108060.1| undecaprenyl pyrophosphate synthetase [Geitlerinema sp. PCC 7407]
gi|427983864|gb|AFY65008.1| Undecaprenyl pyrophosphate synthetase [Geitlerinema sp. PCC 7407]
Length = 249
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 ERHLYTASICDPDLLIRTSGEMRISNFLLWQVAYSEIYITETLW 224
>gi|397671310|ref|YP_006512845.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium
propionicum F0230a]
gi|395142874|gb|AFN46981.1| di-trans,poly-cis-decaprenylcistransferase [Propionibacterium
propionicum F0230a]
Length = 279
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
++ +H++ PDPD+ IR+SGE R S FLLWQ+++ Y ALW + +K
Sbjct: 210 EISEHLYTKGQPDPDLIIRTSGEQRLSGFLLWQSAHSEFYFCEALWPDFRK 260
>gi|392412275|ref|YP_006448882.1| undecaprenyl diphosphate synthase [Desulfomonile tiedjei DSM 6799]
gi|390625411|gb|AFM26618.1| undecaprenyl diphosphate synthase [Desulfomonile tiedjei DSM 6799]
Length = 251
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 17/78 (21%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW- 95
+ ++ E+T ++ +D A PDPD+ IR+ GE R SNFLLWQ++ LY LW
Sbjct: 163 QSEVTEETFEQYLDT------ASIPDPDLLIRTGGEQRLSNFLLWQSAYAELYFSTVLWP 216
Query: 96 ----------LEEKKKRQ 103
+EE + RQ
Sbjct: 217 DFDDAEFMKAIEEYRSRQ 234
>gi|261379561|ref|ZP_05984134.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria subflava
NJ9703]
gi|284798035|gb|EFC53382.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria subflava
NJ9703]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +++ + AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 168 LSRYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDTLW 212
>gi|302874653|ref|YP_003843286.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
gi|307690734|ref|ZP_07633180.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
gi|302577510|gb|ADL51522.1| undecaprenyl diphosphate synthase [Clostridium cellulovorans 743B]
Length = 252
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
DVEK+++ A PDPD+ IR SGE R SNFLLWQ + + W
Sbjct: 180 DVEKYLYTAGMPDPDLIIRPSGEKRISNFLLWQCAYSEFWYSNINW 225
>gi|345874682|ref|ZP_08826482.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria weaveri LMG
5135]
gi|417958074|ref|ZP_12600991.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria weaveri ATCC
51223]
gi|343967466|gb|EGV35711.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria weaveri ATCC
51223]
gi|343970041|gb|EGV38239.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria weaveri LMG
5135]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++ ++ AP+PD+ IR+ GETR SNFLLWQ + LY LW
Sbjct: 170 RYLMLSEAPEPDLFIRTGGETRISNFLLWQLAYSELYFTDTLW 212
>gi|226940989|ref|YP_002796063.1| UppS [Laribacter hongkongensis HLHK9]
gi|226715916|gb|ACO75054.1| UppS [Laribacter hongkongensis HLHK9]
Length = 252
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ ++ +A AP+PD+ IR+ GE R SNFLLWQ + LY ALW
Sbjct: 170 ADLAPYLSLAYAPEPDLFIRTGGEQRVSNFLLWQLAYTELYFTDALW 216
>gi|307151049|ref|YP_003886433.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7822]
gi|306981277|gb|ADN13158.1| undecaprenyl diphosphate synthase [Cyanothece sp. PCC 7822]
Length = 249
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
SQ + +I+ + I + + E+H++ + P PD+ +R+SGE R SNFLLWQ + +Y
Sbjct: 162 ASQVKQGEINPEDIDEAL-FERHLYTSGVPYPDLLVRTSGEMRISNFLLWQLAYAEIYVT 220
Query: 92 AALW 95
LW
Sbjct: 221 QTLW 224
>gi|434399671|ref|YP_007133675.1| Undecaprenyl pyrophosphate synthetase [Stanieria cyanosphaera PCC
7437]
gi|428270768|gb|AFZ36709.1| Undecaprenyl pyrophosphate synthetase [Stanieria cyanosphaera PCC
7437]
Length = 248
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+ I + +++ +PDPD+ IR+SGE R SNFLLWQ + +Y W
Sbjct: 171 EAIDENLISQ------YLYTCSSPDPDLLIRTSGEMRLSNFLLWQMAYTEIYVTETFW 222
>gi|427731659|ref|YP_007077896.1| undecaprenyl diphosphate synthase [Nostoc sp. PCC 7524]
gi|427367578|gb|AFY50299.1| undecaprenyl diphosphate synthase [Nostoc sp. PCC 7524]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
VE+H++ A P PD+ IR+SGE R SNFLLWQ + +Y W
Sbjct: 172 VEQHLYTADTPAPDLLIRTSGEMRLSNFLLWQMAYTEMYFTEIFW 216
>gi|306821647|ref|ZP_07455245.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550392|gb|EFM38385.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 238
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
EKID++T+K+ +++ + PDPD+ IR+ GE R SNF+L++ S Y LW E
Sbjct: 161 EKIDDETVKR------YLYTSYMPDPDLIIRTGGEIRLSNFMLYEASYSEFYFCDTLWPE 214
>gi|402494473|ref|ZP_10841214.1| UDP diphosphate synthase [Aquimarina agarilytica ZC1]
Length = 245
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I ED IK+ H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 166 ITEDVIKE------HLYTKNIPDVDLLIRTSGEQRISNFLLWQIAYAELYFTPVLW 215
>gi|354604731|ref|ZP_09022720.1| di-trans,poly-cis-decaprenylcistransferase [Alistipes indistinctus
YIT 12060]
gi|353347310|gb|EHB91586.1| di-trans,poly-cis-decaprenylcistransferase [Alistipes indistinctus
YIT 12060]
Length = 240
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H+ A PDPD+ IR+SGE R SNFLLWQ S LY W
Sbjct: 169 ISGHLVTAGVPDPDLLIRTSGERRLSNFLLWQLSYSELYFTDVYW 213
>gi|340786525|ref|YP_004751990.1| Undecaprenyl pyrophosphate synthetase [Collimonas fungivorans
Ter331]
gi|340551792|gb|AEK61167.1| Undecaprenyl pyrophosphate synthetase [Collimonas fungivorans
Ter331]
Length = 261
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ +H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 182 ELAQHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDTYW 227
>gi|298370304|ref|ZP_06981620.1| undecaprenyl pyrophosphate synthetase [Neisseria sp. oral taxon 014
str. F0314]
gi|298281764|gb|EFI23253.1| undecaprenyl pyrophosphate synthetase [Neisseria sp. oral taxon 014
str. F0314]
Length = 248
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEE 98
+I ED++ + ++ + AP+PD+ IR+ GETR SNFLLWQ + LY LW +
Sbjct: 162 EITEDSLGR------YLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDTLWPDF 215
Query: 99 KKK 101
KK
Sbjct: 216 DKK 218
>gi|89901451|ref|YP_523922.1| undecaprenyl diphosphate synthase [Rhodoferax ferrireducens T118]
gi|89346188|gb|ABD70391.1| Undecaprenyl pyrophosphate synthetase [Rhodoferax ferrireducens
T118]
Length = 242
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H+ ++ APDPD+ IR+ GE+R SNF+LWQ + L+ ALW
Sbjct: 170 LSEHLGLSYAPDPDLLIRTGGESRISNFMLWQLAYTELFFTDALW 214
>gi|420169799|ref|ZP_14676377.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM070]
gi|420209462|ref|ZP_14714899.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM003]
gi|394243099|gb|EJD88473.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM070]
gi|394278909|gb|EJE23221.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM003]
Length = 256
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G E IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGF--EVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|284039283|ref|YP_003389213.1| UDP diphosphate synthase [Spirosoma linguale DSM 74]
gi|283818576|gb|ADB40414.1| undecaprenyl diphosphate synthase [Spirosoma linguale DSM 74]
Length = 245
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++IDE T + H+ PDP++ IR+SGE R SNF+LWQ + LY P LW +
Sbjct: 163 DQIDETTFGQ------HLSTKGIPDPELMIRTSGEMRISNFMLWQLAYSELYMPDVLWPD 216
Query: 98 EKKKRQF 104
+K+ +
Sbjct: 217 FRKEHLY 223
>gi|257458507|ref|ZP_05623644.1| di-trans,poly-cis-decaprenylcistransferase [Treponema vincentii
ATCC 35580]
gi|257444104|gb|EEV19210.1| di-trans,poly-cis-decaprenylcistransferase [Treponema vincentii
ATCC 35580]
Length = 224
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E + ED +KL+D A P D+ IR+ GE R SNFLLWQT+ YS LW
Sbjct: 147 ETLTEDAFEKLLDT------AGVPPADLVIRTGGEKRLSNFLLWQTAYAEFYSTDVLW 198
>gi|345853363|ref|ZP_08806264.1| undecaprenyl pyrophosphate synthase [Streptomyces zinciresistens
K42]
gi|345635172|gb|EGX56778.1| undecaprenyl pyrophosphate synthase [Streptomyces zinciresistens
K42]
Length = 257
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H++ PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 189 IGRHLYTGAQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCEVFW 233
>gi|116669734|ref|YP_830667.1| undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
gi|116609843|gb|ABK02567.1| Undecaprenyl pyrophosphate synthetase [Arthrobacter sp. FB24]
Length = 253
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E D + + + + DE ++ D+ + ++ PDPD+ IR+SGE R S F
Sbjct: 156 VDAVRELLHDAVARGKDIGKLADELSVD---DISRFLYTRGQPDPDLVIRTSGEQRLSGF 212
Query: 79 LLWQTSNCSLYSPAALW 95
L+WQ++ Y ALW
Sbjct: 213 LMWQSAYSEFYFCEALW 229
>gi|343084541|ref|YP_004773836.1| UDP pyrophosphate synthase [Cyclobacterium marinum DSM 745]
gi|342353075|gb|AEL25605.1| Undecaprenyl pyrophosphate synthase [Cyclobacterium marinum DSM
745]
Length = 247
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
+ +K ++ + I + V + +H+ A PDP++ IR+SGE R SNF+LWQ + LY
Sbjct: 154 KVVKGELSAEAINQKV-IGEHLNTANIPDPELLIRTSGEIRISNFMLWQLAYTELYFTEV 212
Query: 94 LWLEEKKK 101
LW + +KK
Sbjct: 213 LWPDFRKK 220
>gi|220912015|ref|YP_002487324.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
gi|219858893|gb|ACL39235.1| undecaprenyl diphosphate synthase [Arthrobacter chlorophenolicus
A6]
Length = 257
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E D + + + DE ++ D+ + ++ PDPD+ IR+SGE R S F
Sbjct: 160 VDAVRELLHDAVAKGADINQLADELSVD---DISRFLYTRGQPDPDLVIRTSGEQRLSGF 216
Query: 79 LLWQTSNCSLYSPAALW 95
L+WQ++ Y ALW
Sbjct: 217 LMWQSAYSEFYFCEALW 233
>gi|406573280|ref|ZP_11049032.1| undecaprenyl diphosphate synthase [Janibacter hoylei PVAS-1]
gi|404557212|gb|EKA62662.1| undecaprenyl diphosphate synthase [Janibacter hoylei PVAS-1]
Length = 251
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L+E E T++ D+ H++ PDPD+ IR+SGE R S FLLWQ+++ Y W
Sbjct: 171 LEEVASELTVE---DISGHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSAHSEYYFCEVYW 227
Query: 96 LEEKK 100
E ++
Sbjct: 228 PEFRR 232
>gi|320333090|ref|YP_004169801.1| undecaprenyl pyrophosphate synthase [Deinococcus maricopensis DSM
21211]
gi|319754379|gb|ADV66136.1| Undecaprenyl pyrophosphate synthase [Deinococcus maricopensis DSM
21211]
Length = 276
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 27 EDKLDGSQALKEKIDED--TIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNF 78
E+ +D + K DED T++ + D V H++ A PDPD IR+SGE R S F
Sbjct: 176 EEIVDAVRTYLRKADEDGLTLRDVADTLNAEHVSAHLYTAGTPDPDFIIRTSGEIRLSGF 235
Query: 79 LLWQTSNCSLYSPAALW 95
+LWQ+ Y W
Sbjct: 236 MLWQSVYSEFYFCDVYW 252
>gi|345017713|ref|YP_004820066.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033056|gb|AEM78782.1| Undecaprenyl pyrophosphate synthase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 249
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ C L+ +++E I E TI ++++ PDPD+ IR+SGE R SNF
Sbjct: 155 VKAVKKICTKILNKELSIEE-ITEQTI------SENLYTKNQPDPDLIIRTSGEKRLSNF 207
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ L+ LW
Sbjct: 208 LLWQSAYSELWFTEVLW 224
>gi|167040293|ref|YP_001663278.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter sp. X514]
gi|256750777|ref|ZP_05491662.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914377|ref|ZP_07131693.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X561]
gi|307724387|ref|YP_003904138.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X513]
gi|166854533|gb|ABY92942.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X514]
gi|256750360|gb|EEU63379.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889312|gb|EFK84458.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X561]
gi|307581448|gb|ADN54847.1| undecaprenyl diphosphate synthase [Thermoanaerobacter sp. X513]
Length = 249
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ C L+ +++E I E TI ++++ PDPD+ IR+SGE R SNF
Sbjct: 155 VKAVKKICTKILNKELSIEE-ITEQTI------SENLYTKNQPDPDLIIRTSGEKRLSNF 207
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ L+ LW
Sbjct: 208 LLWQSAYSELWFTEVLW 224
>gi|392394588|ref|YP_006431190.1| undecaprenyl pyrophosphate synthetase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525666|gb|AFM01397.1| Undecaprenyl pyrophosphate synthetase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 256
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+ CE+ +K+++ + I V + +H+F + PDPD+ IR+SGE R SNFLLW
Sbjct: 162 VRRLCEE------VMKKELTPEEITGEV-ISQHLFTSGLPDPDLLIRTSGELRVSNFLLW 214
Query: 82 QTSNCSLYSPAALW 95
Q + + LW
Sbjct: 215 QIAYTEIVVTECLW 228
>gi|301632805|ref|XP_002945471.1| PREDICTED: undecaprenyl pyrophosphate synthase-like [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 55 MFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
M MA PDPD+ IR+ GE R SNFLLWQ + LY A W
Sbjct: 164 MAMAHVPDPDLLIRTGGEMRISNFLLWQAAYSELYFSARFW 204
>gi|256809986|ref|YP_003127355.1| undecaprenyl diphosphate synthase [Methanocaldococcus fervens AG86]
gi|256793186|gb|ACV23855.1| undecaprenyl diphosphate synthase [Methanocaldococcus fervens AG86]
Length = 277
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 30 LDGSQALKEKID------EDTIKKLVDVEKHMFMA--VAPDPDITIRSSGETRPSNFLLW 81
+D + + EK+ ED K+L+D KH++ A P+PD+ IR+SGE R SNFL+W
Sbjct: 182 IDAVKKIAEKVKKGEVKPEDIDKELID--KHLYTADLPFPNPDLIIRTSGEERISNFLIW 239
Query: 82 QTSNCSLYSPAALW 95
Q+S LY W
Sbjct: 240 QSSYSELYFCDIYW 253
>gi|298492874|ref|YP_003723051.1| undecaprenyl diphosphate synthase ['Nostoc azollae' 0708]
gi|298234792|gb|ADI65928.1| undecaprenyl diphosphate synthase ['Nostoc azollae' 0708]
Length = 249
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 ESHLYTAGITDPDLLIRTSGEMRLSNFLLWQMAYGEIYITETLW 224
>gi|218961844|ref|YP_001741619.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Candidatus
Cloacamonas acidaminovorans]
gi|167730501|emb|CAO81413.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Candidatus
Cloacamonas acidaminovorans str. Evry]
Length = 246
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++ A PDPD+ IR+SGE R SNFLLWQ++ LY LW
Sbjct: 178 YLWTAGQPDPDLIIRTSGEKRLSNFLLWQSAYAELYITDTLW 219
>gi|387907295|ref|YP_006337631.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582188|gb|AFJ90966.1| undecaprenyl diphosphate synthase [Blattabacterium sp. (Blaberus
giganteus)]
Length = 243
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
+ H++ PD D+ IR+SGE R SNFLLWQ++ LY LW + +KK F
Sbjct: 174 QNHLYTKDLPDVDLIIRTSGEQRISNFLLWQSAYAELYFTNILWPDFRKKDFF 226
>gi|326936335|ref|XP_003214211.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Meleagris
gallopavo]
Length = 333
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++K ++ + +PDPD+ IR+SGE R S+FLLWQTS+ L + LW E
Sbjct: 188 LDKCLYTSNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPE 234
>gi|260654953|ref|ZP_05860441.1| di-trans,poly-cis-decaprenylcistransferase [Jonquetella anthropi
E3_33 E1]
gi|424844813|ref|ZP_18269424.1| undecaprenyl diphosphate synthase [Jonquetella anthropi DSM 22815]
gi|260630268|gb|EEX48462.1| di-trans,poly-cis-decaprenylcistransferase [Jonquetella anthropi
E3_33 E1]
gi|363986251|gb|EHM13081.1| undecaprenyl diphosphate synthase [Jonquetella anthropi DSM 22815]
Length = 230
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 27 EDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
++ +D QA ++ E I+ D+++ +++ PDPD+ IR+SGE R SNFLLWQ S
Sbjct: 138 QEIIDAVQAAQKAGCE--IRTEEDMKRFLYLPDVPDPDLVIRTSGEMRLSNFLLWQCSYS 195
Query: 87 SLYSPAALW 95
Y LW
Sbjct: 196 EFYFTDVLW 204
>gi|254797263|ref|YP_003082105.1| UDP diphosphate synthase [Neorickettsia risticii str. Illinois]
gi|254590503|gb|ACT69865.1| undecaprenyl diphosphate synthase [Neorickettsia risticii str.
Illinois]
Length = 230
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 34 QALKEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
A+ I++ + VDV+K +++ PDPD+ IR++GE R SNFLLWQ+S LY
Sbjct: 142 NAVSRMINDGLRAEEVDVQKLASYLYTDGIPDPDLIIRTAGEKRLSNFLLWQSSYSELYF 201
Query: 91 PAALW 95
LW
Sbjct: 202 CDTLW 206
>gi|118101494|ref|XP_417694.2| PREDICTED: dehydrodolichyl diphosphate synthase [Gallus gallus]
Length = 333
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++K ++ + +PDPD+ IR+SGE R S+FLLWQTS+ L + LW E
Sbjct: 188 LDKCLYTSNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPE 234
>gi|402592117|gb|EJW86046.1| di-trans,poly-cis-decaprenylcistransferase [Wuchereria bancrofti]
Length = 271
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I+E I + +D + DPD+ IR+SGETR S+FLLWQ S C +Y LW
Sbjct: 158 INECLISRCLDSR------FSNDPDLLIRTSGETRLSDFLLWQCSKCQIYFDGVLW 207
>gi|385681211|ref|ZP_10055139.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis sp. ATCC
39116]
Length = 258
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L + DE T + K++DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 168 LLQHADEGTSIRELAKILDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 227
Query: 89 YSPAALW 95
+ A W
Sbjct: 228 WFTEAYW 234
>gi|359411425|ref|ZP_09203890.1| Undecaprenyl pyrophosphate synthase [Clostridium sp. DL-VIII]
gi|357170309|gb|EHI98483.1| Undecaprenyl pyrophosphate synthase [Clostridium sp. DL-VIII]
Length = 252
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
KL S+ KI+E+ I + + VE++++ PDPDI IR SGE R SNFLLWQ +
Sbjct: 161 KLISSEVKSNKINEEDINEKL-VEEYLYTKGIPDPDIIIRPSGEQRLSNFLLWQCAYSEF 219
Query: 89 YSPAALWLEEKKK 101
+ W + K+K
Sbjct: 220 WYANINWPDFKEK 232
>gi|429752617|ref|ZP_19285463.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429176176|gb|EKY17574.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 254
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 180 IQQHLYTNNLPDVDLLIRTSGEYRISNFLLWQIAYAELYFAEVLW 224
>gi|338734071|ref|YP_004672544.1| undecaprenyl pyrophosphate synthase [Simkania negevensis Z]
gi|336483454|emb|CCB90053.1| undecaprenyl pyrophosphate synthase [Simkania negevensis Z]
Length = 255
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
D+++ + +E+I E TI + +D + PDPD+ IR SG+ R SNFL+WQ S
Sbjct: 170 DEVEAGRLRREEITEKTISEFLDTSQW------PDPDLLIRPSGDLRISNFLIWQISYSE 223
Query: 88 LYSPAALW 95
+Y LW
Sbjct: 224 IYYTDVLW 231
>gi|167037632|ref|YP_001665210.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116047|ref|YP_004186206.1| undecaprenyl diphosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389446|ref|ZP_08211013.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
JW 200]
gi|166856466|gb|ABY94874.1| undecaprenyl diphosphate synthase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929138|gb|ADV79823.1| undecaprenyl diphosphate synthase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994451|gb|EGD52876.1| undecaprenyl diphosphate synthase [Thermoanaerobacter ethanolicus
JW 200]
Length = 249
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ C L+ +++E I E TI ++++ PDPD+ IR+SGE R SNF
Sbjct: 155 VKAVKKICTKILNKELSIEE-ITEQTI------SENLYTKNQPDPDLIIRTSGEKRLSNF 207
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ L+ LW
Sbjct: 208 LLWQSAYSELWFTEVLW 224
>gi|325290372|ref|YP_004266553.1| undecaprenyl pyrophosphate synthetase [Syntrophobotulus glycolicus
DSM 8271]
gi|324965773|gb|ADY56552.1| Undecaprenyl pyrophosphate synthetase [Syntrophobotulus glycolicus
DSM 8271]
Length = 271
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E ++ +G +++E I+E I E H++ A PDP++ IR+SGE R SNF
Sbjct: 172 VKAVREIAQEVRNGEISVQE-INEKII------EDHLYTASIPDPELLIRTSGEMRLSNF 224
Query: 79 LLWQTSNCSLYSPAALWLEEKKK 101
LLWQ + + W + K+K
Sbjct: 225 LLWQVAYSEIVVAEEYWPDFKEK 247
>gi|357391662|ref|YP_004906503.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
gi|311898139|dbj|BAJ30547.1| putative undecaprenyl diphosphate synthase [Kitasatospora setae
KM-6054]
Length = 264
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 45 IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +++DVE +H++ PDPD+ IR+SGE R S FLLWQ+++ Y A W
Sbjct: 187 LAEILDVEHIAEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFYFCEAYW 240
>gi|223940470|ref|ZP_03632321.1| undecaprenyl diphosphate synthase [bacterium Ellin514]
gi|223890873|gb|EEF57383.1| undecaprenyl diphosphate synthase [bacterium Ellin514]
Length = 245
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 33 SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
++A K ++D I + V V H++ PDPD+ IR+SGE R SNFLLWQ S L
Sbjct: 159 AKAKKGELDPAEINEQV-VADHLYTRNWPDPDVLIRTSGEMRVSNFLLWQISYSELVVTQ 217
Query: 93 ALW 95
LW
Sbjct: 218 TLW 220
>gi|433457977|ref|ZP_20415939.1| undecaprenyl pyrophosphate synthetase [Arthrobacter
crystallopoietes BAB-32]
gi|432194039|gb|ELK50701.1| undecaprenyl pyrophosphate synthetase [Arthrobacter
crystallopoietes BAB-32]
Length = 253
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ ++++ PDPD+ IR+SGE R S FL+WQ++ Y ALW
Sbjct: 184 DISRYLYTRGLPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALW 229
>gi|399017262|ref|ZP_10719459.1| undecaprenyl diphosphate synthase [Herbaspirillum sp. CF444]
gi|398104033|gb|EJL94190.1| undecaprenyl diphosphate synthase [Herbaspirillum sp. CF444]
Length = 252
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 175 HLAMAYAPEPDLFIRTGGEERISNFLLWQLAYSELYFTETYW 216
>gi|395803503|ref|ZP_10482749.1| undecaprenyl pyrophosphate synthase [Flavobacterium sp. F52]
gi|395434315|gb|EJG00263.1| undecaprenyl pyrophosphate synthase [Flavobacterium sp. F52]
Length = 246
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ ++ +A+ +K+ + I +D + +H++ PD D+ IR+SGE R SNFLLWQ
Sbjct: 144 EELVNAVKAISDKVKNNIISIDTIDDSIINEHLYTQNLPDVDLLIRTSGEHRISNFLLWQ 203
Query: 83 TSNCSLYSPAALW 95
+ LY LW
Sbjct: 204 IAYAELYFTNVLW 216
>gi|377568261|ref|ZP_09797456.1| undecaprenyl pyrophosphate synthase [Gordonia terrae NBRC 100016]
gi|377534588|dbj|GAB42621.1| undecaprenyl pyrophosphate synthase [Gordonia terrae NBRC 100016]
Length = 260
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+ E+K+ E +D T++ ++ +++ PDPD+ IR+SGE R S F
Sbjct: 163 VDAVRALLEEKVAAGATATEMVDAVTVEA---IDANLYTKGQPDPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|163841776|ref|YP_001626181.1| trans,cis-farnesyl diphosphate synthase [Renibacterium salmoninarum
ATCC 33209]
gi|162955252|gb|ABY24767.1| trans,cis-farnesyl diphosphate synthase [Renibacterium salmoninarum
ATCC 33209]
Length = 255
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ ++++ + PDPD+ IR+SGE R S FLLWQ++ +Y LW
Sbjct: 186 DISRYLYTSGQPDPDLFIRTSGEQRLSGFLLWQSAYSEMYFCEVLW 231
>gi|302036856|ref|YP_003797178.1| undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
gi|190343271|gb|ACE75659.1| undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
gi|300604920|emb|CBK41253.1| Undecaprenyl pyrophosphate synthase [Candidatus Nitrospira
defluvii]
Length = 261
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKK 101
+++ ++ PDPD+ IR+SGETR SNFLLWQ + LY LW + +++
Sbjct: 186 MQRALYTHNLPDPDLLIRTSGETRISNFLLWQLAYTELYFTPTLWPDFRRR 236
>gi|374596701|ref|ZP_09669705.1| Undecaprenyl pyrophosphate synthase [Gillisia limnaea DSM 15749]
gi|373871340|gb|EHQ03338.1| Undecaprenyl pyrophosphate synthase [Gillisia limnaea DSM 15749]
Length = 245
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+I D I + + + +H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 159 EEISPDAIDESI-INQHLYTRNLPDVDLLIRTSGEQRISNFLLWQIAYAELYFTNILW 215
>gi|345794449|ref|XP_854980.2| PREDICTED: dehydrodolichyl diphosphate synthase isoform 3 [Canis
lupus familiaris]
Length = 333
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++K ++ +P PDI IR+SGE R S+FLLWQTS+C L LW E
Sbjct: 188 LDKCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPE 234
>gi|289192043|ref|YP_003457984.1| undecaprenyl diphosphate synthase [Methanocaldococcus sp. FS406-22]
gi|288938493|gb|ADC69248.1| undecaprenyl diphosphate synthase [Methanocaldococcus sp. FS406-22]
Length = 277
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 30 LDGSQALKEKID------EDTIKKLVDVEKHMFMA--VAPDPDITIRSSGETRPSNFLLW 81
+D + + EK+ ED K+L+D KH++ A P+PD+ IR+SGE R SNFL+W
Sbjct: 182 IDAVKKIAEKVKRGEIKPEDIDKELID--KHLYTADLPFPNPDLIIRTSGEERISNFLIW 239
Query: 82 QTSNCSLYSPAALW 95
Q+S LY W
Sbjct: 240 QSSYSELYFCDIYW 253
>gi|256372046|ref|YP_003109870.1| undecaprenyl diphosphate synthase [Acidimicrobium ferrooxidans DSM
10331]
gi|256008630|gb|ACU54197.1| undecaprenyl diphosphate synthase [Acidimicrobium ferrooxidans DSM
10331]
Length = 241
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 35 ALKEKIDEDTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
AL+ + E + +D V H++ PDPD+ +R+SGE R SNFLLWQ + L
Sbjct: 151 ALRRIVAEGVPARAIDESTVASHLYFPDMPDPDLVVRTSGEYRISNFLLWQLAYAELVFL 210
Query: 92 AALWLEEKKKRQF 104
LW + +++ F
Sbjct: 211 DTLWPDVRREHLF 223
>gi|395770687|ref|ZP_10451202.1| undecaprenyl diphosphate synthase [Streptomyces acidiscabies
84-104]
Length = 257
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ + PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 180 LAESVDIDMIGR------HLYTSDQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFW 233
>gi|409358032|ref|ZP_11236397.1| UDP diphosphate synthase [Dietzia alimentaria 72]
Length = 255
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWL 96
+E ID T++ + +H++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W
Sbjct: 176 QELIDGMTVEA---IGEHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWP 232
Query: 97 EEKK 100
E ++
Sbjct: 233 EFRR 236
>gi|300781598|ref|ZP_07091452.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
gi|300533305|gb|EFK54366.1| Di-trans,poly-cis-decaprenylcistransferase [Corynebacterium
genitalium ATCC 33030]
Length = 259
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ + K+D E D +++ L +H++ + PDPD+ IR+SGE R S F
Sbjct: 162 VDAVQHFIRAKVDEGVPAAELADHVSVESL---SEHLYTSGQPDPDLVIRTSGEQRLSGF 218
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ ++ W
Sbjct: 219 LLWQSAYSEIWFTDTYW 235
>gi|329935269|ref|ZP_08285235.1| undecaprenyl pyrophosphate synthetase [Streptomyces
griseoaurantiacus M045]
gi|329305092|gb|EGG48951.1| undecaprenyl pyrophosphate synthetase [Streptomyces
griseoaurantiacus M045]
Length = 257
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ + PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 180 LAESVDIDMIGR------HLYTSDQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFW 233
>gi|340778702|ref|ZP_08698645.1| undecaprenyl pyrophosphate synthase [Acetobacter aceti NBRC 14818]
Length = 254
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ID D+I + V + +H+ A PDPD+ +R+SGE R SNFLLWQ++ L LW
Sbjct: 172 EIDPDSIDEDV-MSRHLLTAGIPDPDVIVRTSGEHRLSNFLLWQSAYAELVFLDQLW 227
>gi|187478232|ref|YP_786256.1| undecaprenyl pyrophosphate synthase [Bordetella avium 197N]
gi|115422818|emb|CAJ49346.1| undecaprenyl pyrophosphate synthetase [Bordetella avium 197N]
Length = 250
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVE-----KHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
D L ++A+ + + D + +L D++ +++ MA AP+PD+ IR+ GE R SNFL+WQ
Sbjct: 148 DVLQATRAMLQA-EPDLVGRLQDIDESRMAQYLSMAWAPEPDLFIRTGGEQRISNFLIWQ 206
Query: 83 TSNCSLYSPAALW 95
+ LY A W
Sbjct: 207 LAYTELYFSDAYW 219
>gi|257792210|ref|YP_003182816.1| undecaprenyl diphosphate synthase [Eggerthella lenta DSM 2243]
gi|257476107|gb|ACV56427.1| undecaprenyl diphosphate synthase [Eggerthella lenta DSM 2243]
Length = 259
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 30 LDGSQA-LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
+DG+ A L+E + + + + + +H++ A PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 168 MDGAHAALREGREPEPLSE-ATLSRHLYTADIPDPDLLIRTSGEMRVSNFLLWQIAYSEF 226
Query: 89 YSPAALW 95
LW
Sbjct: 227 VCTETLW 233
>gi|146299451|ref|YP_001194042.1| UDP diphosphate synthase [Flavobacterium johnsoniae UW101]
gi|146153869|gb|ABQ04723.1| undecaprenyl diphosphate synthase [Flavobacterium johnsoniae UW101]
Length = 246
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ ++ +A+ +K+ + I +D + +H++ PD D+ IR+SGE R SNFLLWQ
Sbjct: 144 EELVNAVRAISDKVKNNIISIDTIDDSIINEHLYTQNLPDVDLLIRTSGEHRISNFLLWQ 203
Query: 83 TSNCSLYSPAALW 95
+ LY LW
Sbjct: 204 IAYAELYFTNVLW 216
>gi|407769009|ref|ZP_11116386.1| undecaprenyl pyrophosphate synthase [Thalassospira xiamenensis M-5
= DSM 17429]
gi|407287929|gb|EKF13408.1| undecaprenyl pyrophosphate synthase [Thalassospira xiamenensis M-5
= DSM 17429]
Length = 246
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ D K+ + + IDE VE H+ PDPD+ IR+SGE R SNF
Sbjct: 150 IADAMRQIAQKVAAGEIQADAIDESV------VEAHLMTVGMPDPDLLIRTSGEQRISNF 203
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ LW
Sbjct: 204 LLWQSAYTEFVFDDVLW 220
>gi|317490130|ref|ZP_07948619.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp.
1_3_56FAA]
gi|325833614|ref|ZP_08166063.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp. HGA1]
gi|316910835|gb|EFV32455.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp.
1_3_56FAA]
gi|325485538|gb|EGC88007.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthella sp. HGA1]
Length = 259
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 30 LDGSQA-LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
+DG+ A L+E + + + + + +H++ A PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 168 MDGAHAALREGREPEPLSE-ATLSRHLYTADIPDPDLLIRTSGEMRVSNFLLWQIAYSEF 226
Query: 89 YSPAALW 95
LW
Sbjct: 227 VCTETLW 233
>gi|254442949|ref|ZP_05056425.1| undecaprenyl diphosphate synthase [Verrucomicrobiae bacterium
DG1235]
gi|198257257|gb|EDY81565.1| undecaprenyl diphosphate synthase [Verrucomicrobiae bacterium
DG1235]
Length = 249
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H++ A PDPD+ IR+SGETR SNFLL Q++ Y LW
Sbjct: 172 QHLYTAGLPDPDLIIRTSGETRVSNFLLMQSAYAEFYFTETLW 214
>gi|15678260|ref|NP_275375.1| hypothetical protein MTH232 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6136144|sp|O26334.1|UPPS_METTH RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|2621280|gb|AAB84738.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 31 DGSQAL---KEKIDEDTIKKLVD--------VEKHMFMAVAPDPDITIRSSGETRPSNFL 79
DG Q + KI ED L+D + ++++ A DP + IR+SGE R S FL
Sbjct: 156 DGRQEIVDATRKIAEDVKAGLIDPEDIDEDMINRNLYTAGLEDPHLIIRTSGEERLSGFL 215
Query: 80 LWQTSNCSLYSPAALWLEEKK 100
LWQ+S LY +LW E +K
Sbjct: 216 LWQSSYSELYFCDSLWPELRK 236
>gi|453363645|dbj|GAC80587.1| undecaprenyl pyrophosphate synthase [Gordonia malaquae NBRC 108250]
Length = 258
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ D D E I+ T+ ++ +++ + PDPD+ IR+SGE R S F
Sbjct: 161 VDAVQALLSDAADAGATPAEMIEAVTVAG---IDANLYTSGQPDPDLVIRTSGEQRLSGF 217
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 218 LLWQSAYSEIWFTDAYWPEFRR 239
>gi|402313151|ref|ZP_10832072.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium ICM7]
gi|400366911|gb|EJP19931.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium ICM7]
Length = 235
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+ +D + G + KE I+E+ I +D + PDPD+ IR+SGE R SNFLLW
Sbjct: 144 VEHIVDDAVAGVIS-KENINEELISSYLDTKN------LPDPDLLIRTSGELRVSNFLLW 196
Query: 82 QTSNCSLYSPAALW 95
Q + Y LW
Sbjct: 197 QIAYSEFYITDTLW 210
>gi|379059383|ref|ZP_09849909.1| undecaprenyl pyrophosphate synthetase [Serinicoccus profundi MCCC
1A05965]
Length = 254
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+ D L+E T++ D+ H++ PDPD+ IR+SGE R FLLW
Sbjct: 160 VRSLLRDAAASGATLEELAATVTVE---DIAAHLYTRGLPDPDLVIRTSGEQRLGGFLLW 216
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q+++ Y A W + +K
Sbjct: 217 QSAHSEFYFCEAFWPDFRK 235
>gi|88856093|ref|ZP_01130754.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
gi|88814661|gb|EAR24522.1| undecaprenyl pyrophosphate synthetase [marine actinobacterium
PHSC20C1]
Length = 226
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
+ +H++ PDPD+ IR+SGE R S+F+LWQT++ LY AL
Sbjct: 158 IGEHLYTTGQPDPDLVIRTSGEQRISDFMLWQTAHSELYFVEAL 201
>gi|281412822|ref|YP_003346901.1| UDP diphosphate synthase [Thermotoga naphthophila RKU-10]
gi|281373925|gb|ADA67487.1| undecaprenyl diphosphate synthase [Thermotoga naphthophila RKU-10]
Length = 233
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
D SQ K ++ E+T ++ ++++ PDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 147 DVSQGKKIELTEETFRQ------YLYLPDVPDPDLIIRTSGEMRLSNFLLWQSAYSELYF 200
Query: 91 PAALW 95
W
Sbjct: 201 FKKPW 205
>gi|271969714|ref|YP_003343910.1| Z-farnesyl diphosphate synthase [Streptosporangium roseum DSM
43021]
gi|270512889|gb|ACZ91167.1| Z-farnesyl diphosphate synthase [Streptosporangium roseum DSM
43021]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 42 EDTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
ED ++ L DVE +H++ PDPD+ IR+SGE R S FLLWQ+++ Y A W
Sbjct: 176 EDLVEVL-DVEHIAEHLYTRGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFYFCEAYW 231
>gi|148270515|ref|YP_001244975.1| undecaprenyl pyrophosphate synthase [Thermotoga petrophila RKU-1]
gi|147736059|gb|ABQ47399.1| Undecaprenyl pyrophosphate synthetase [Thermotoga petrophila RKU-1]
Length = 233
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
D SQ K ++ E+T ++ ++++ PDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 147 DVSQGKKIELTEETFRQ------YLYLPDVPDPDLIIRTSGEMRLSNFLLWQSAYSELYF 200
Query: 91 PAALW 95
W
Sbjct: 201 FKKPW 205
>gi|119962556|ref|YP_947074.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
gi|403526298|ref|YP_006661185.1| undecaprenyl pyrophosphate synthase [Arthrobacter sp. Rue61a]
gi|119949415|gb|ABM08326.1| undecaprenyl diphosphate synthase [Arthrobacter aurescens TC1]
gi|403228725|gb|AFR28147.1| undecaprenyl pyrophosphate synthase [Arthrobacter sp. Rue61a]
Length = 268
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E D + + + DE ++ D+ K ++ PDPD+ IR+SGE R S F
Sbjct: 171 VDAVRELLHDADAKGRKMSDVADELSVD---DISKFLYTRGQPDPDLVIRTSGEQRLSGF 227
Query: 79 LLWQTSNCSLYSPAALW 95
L+WQ++ Y ALW
Sbjct: 228 LMWQSAYSEFYFCEALW 244
>gi|427418973|ref|ZP_18909156.1| Undecaprenyl pyrophosphate synthetase [Leptolyngbya sp. PCC 7375]
gi|425761686|gb|EKV02539.1| Undecaprenyl pyrophosphate synthetase [Leptolyngbya sp. PCC 7375]
Length = 258
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+E+H++ + DPD+ IR+SGE R SNFLLWQ + +Y W
Sbjct: 178 LERHLYTSGCSDPDLLIRTSGEQRLSNFLLWQMAYAEMYFTNVFW 222
>gi|393780791|ref|ZP_10368997.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 412 str. F0487]
gi|392607905|gb|EIW90771.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 412 str. F0487]
Length = 240
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++KH++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 166 LQKHLYTYDLPDVDLLIRTSGEERISNFLLWQIAYAELYFTEVLW 210
>gi|444433610|ref|ZP_21228748.1| undecaprenyl pyrophosphate synthase [Gordonia soli NBRC 108243]
gi|443885551|dbj|GAC70469.1| undecaprenyl pyrophosphate synthase [Gordonia soli NBRC 108243]
Length = 260
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ +++D E ID +++ ++ H++ + DPD+ IR+SGE R S F
Sbjct: 163 VDAVQSLLRERVDAGADPAELIDAVSVEA---IDAHLYTSGQADPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|326381834|ref|ZP_08203527.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199260|gb|EGD56441.1| undecaprenyl diphosphate synthase [Gordonia neofelifaecis NRRL
B-59395]
Length = 260
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ+ + ++ + +E + +++ ++ H++ + PDPD+ IR+SGE R S F
Sbjct: 163 VDAVQQLLVEAVEAGASREEMVRAISVEG---IDSHLYTSGTPDPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|167752328|ref|ZP_02424455.1| hypothetical protein ALIPUT_00572 [Alistipes putredinis DSM 17216]
gi|167660569|gb|EDS04699.1| di-trans,poly-cis-decaprenylcistransferase [Alistipes putredinis
DSM 17216]
Length = 243
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+I E T V + ++ A PDPD+ IR+SGE R SNFLLWQ + L+ LW
Sbjct: 160 EEISEQT------VSEALYTAGCPDPDLLIRTSGEQRLSNFLLWQAAYAELFFTPVLW 211
>gi|397736228|ref|ZP_10502912.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus sp. JVH1]
gi|396928071|gb|EJI95296.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus sp. JVH1]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 42 EDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEK 99
+D +K + ++ H++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W E +
Sbjct: 176 DDLVKSITIDGIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFR 235
Query: 100 K 100
+
Sbjct: 236 R 236
>gi|256820184|ref|YP_003141463.1| undecaprenyl diphosphate synthase [Capnocytophaga ochracea DSM
7271]
gi|420149802|ref|ZP_14656970.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 335 str. F0486]
gi|429747968|ref|ZP_19281198.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 380 str. F0488]
gi|429756529|ref|ZP_19289118.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 324 str. F0483]
gi|256581767|gb|ACU92902.1| undecaprenyl diphosphate synthase [Capnocytophaga ochracea DSM
7271]
gi|394752999|gb|EJF36604.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 335 str. F0486]
gi|429161836|gb|EKY04205.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 380 str. F0488]
gi|429171064|gb|EKY12706.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 324 str. F0483]
Length = 240
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++KH++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 166 LQKHLYTYDLPDVDLLIRTSGEERISNFLLWQIAYAELYFTEVLW 210
>gi|149176638|ref|ZP_01855250.1| undecaprenyl pyrophosphate synthetase [Planctomyces maris DSM 8797]
gi|148844517|gb|EDL58868.1| undecaprenyl pyrophosphate synthetase [Planctomyces maris DSM 8797]
Length = 250
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I+E+ I H++ + PDPD+ IR++GE R SNFLLWQ S L+ W
Sbjct: 172 EAINEEVISA------HLYTSGMPDPDLVIRTAGEMRVSNFLLWQISYAELWVTETYW 223
>gi|427708195|ref|YP_007050572.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7107]
gi|427360700|gb|AFY43422.1| Undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7107]
Length = 247
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KI+ + + + +E+H++ P PD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 161 KINAAAVNETL-IEQHLYTVDTPAPDLLIRTSGEMRLSNFLLWQMAYTEMYFADVLW 216
>gi|363422910|ref|ZP_09310983.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
pyridinivorans AK37]
gi|359732627|gb|EHK81640.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus
pyridinivorans AK37]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
V+ H++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W E ++
Sbjct: 187 VDSHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRR 236
>gi|345794451|ref|XP_003433905.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Canis
lupus familiaris]
Length = 294
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++K ++ +P PDI IR+SGE R S+FLLWQTS+C L LW
Sbjct: 149 LDKCLYTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLW 193
>gi|344940510|ref|ZP_08779798.1| Undecaprenyl pyrophosphate synthase [Methylobacter tundripaludum
SV96]
gi|344261702|gb|EGW21973.1| Undecaprenyl pyrophosphate synthase [Methylobacter tundripaludum
SV96]
Length = 262
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
G A E D+D ++L++ +++ A P+PD+ IR+ GE R SNFLLWQ + LY
Sbjct: 164 GKIASGELKDQDINEQLIN--QYLSTADLPEPDLFIRTGGEQRVSNFLLWQLAYTELYFT 221
Query: 92 AALW 95
A LW
Sbjct: 222 ATLW 225
>gi|392397163|ref|YP_006433764.1| undecaprenyl diphosphate synthase [Flexibacter litoralis DSM 6794]
gi|390528241|gb|AFM03971.1| undecaprenyl diphosphate synthase [Flexibacter litoralis DSM 6794]
Length = 268
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+IDE+ I K H++ A PDP++ IR+SGE R SNFLLWQ + L LW
Sbjct: 189 QIDEELIAK------HLYTASIPDPELLIRTSGEMRISNFLLWQLAYSELAFLDVLW 239
>gi|319950189|ref|ZP_08024116.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
gi|319436093|gb|EFV91286.1| putative undecaprenyl pyrophosphate synthetase [Dietzia cinnamea
P4]
Length = 295
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+E E +D + + +D T++ + +H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 201 ARELVEQLIDEGRTGADLVDGITVE---GIGEHLYTSGQPDPDLVIRTSGEQRLSGFLLW 257
Query: 82 QTSNCSLYSPAALW 95
Q++ ++ A W
Sbjct: 258 QSAYSEIWFTEAYW 271
>gi|325676569|ref|ZP_08156247.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
gi|325552747|gb|EGD22431.1| undecaprenyl diphosphate synthase [Rhodococcus equi ATCC 33707]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNF 78
VQ DKL + D + K + VE H++ + PDPD+ IR+SGE R S F
Sbjct: 161 VQSLLRDKLAAG------LTGDDLVKAMSVEGIDGHLYTSGQPDPDLVIRTSGEQRLSGF 214
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 215 LLWQSAYSEIWFTEAYWPEFRR 236
>gi|418463278|ref|ZP_13034295.1| undecaprenyl pyrophosphate synthase [Saccharomonospora azurea SZMC
14600]
gi|359733849|gb|EHK82837.1| undecaprenyl pyrophosphate synthase [Saccharomonospora azurea SZMC
14600]
Length = 246
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 36 LKEKIDE----DTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L++ DE D + + +DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 156 LRQHADEGKTLDEVAETLDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 215
Query: 89 YSPAALW 95
+ A W
Sbjct: 216 WFTEAYW 222
>gi|337279384|ref|YP_004618856.1| undecaprenyl diphosphate synthase [Ramlibacter tataouinensis
TTB310]
gi|334730461|gb|AEG92837.1| Undecaprenyl diphosphate synthase [Ramlibacter tataouinensis
TTB310]
Length = 240
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
+ D +QA DE + M +A PDPD+ IR+ GE R SNFLLWQ +
Sbjct: 134 GRWDMAQAAARLADEGKPINEATLSAAMALAHVPDPDLVIRTGGEQRISNFLLWQAAYSE 193
Query: 88 LYSPAALWLE 97
LY LW E
Sbjct: 194 LYFSDKLWPE 203
>gi|307564740|ref|ZP_07627268.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella amnii CRIS
21A-A]
gi|307346462|gb|EFN91771.1| di-trans,poly-cis-decaprenylcistransferase [Prevotella amnii CRIS
21A-A]
Length = 252
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 39 KIDEDTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++ D IK + + +H+ A PDPD+ IR+ GE R SN+LLWQ + LY W
Sbjct: 159 QLNADNIKTYITEETISQHLTTASIPDPDLLIRTGGEVRISNYLLWQIAYTELYFCNTFW 218
>gi|242242543|ref|ZP_04796988.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
W23144]
gi|418328019|ref|ZP_12939149.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis 14.1.R1.SE]
gi|420174972|ref|ZP_14681418.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM061]
gi|420191693|ref|ZP_14697604.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM023]
gi|242233970|gb|EES36282.1| undecaprenyl pyrophosphatase synthetase [Staphylococcus epidermidis
W23144]
gi|365232406|gb|EHM73404.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis 14.1.R1.SE]
gi|394244505|gb|EJD89847.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM061]
gi|394265844|gb|EJE10491.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM023]
Length = 256
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + + IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--DVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|384097784|ref|ZP_09998904.1| undecaprenyl pyrophosphate synthase [Imtechella halotolerans K1]
gi|383836666|gb|EID76073.1| undecaprenyl pyrophosphate synthase [Imtechella halotolerans K1]
Length = 247
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKID+ I +H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 166 EKIDDSVI------NQHLYTHDLPDVDLLIRTSGEYRISNFLLWQIAYAELYFTPVLW 217
>gi|418615528|ref|ZP_13178470.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU118]
gi|418630348|ref|ZP_13192830.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU128]
gi|418634094|ref|ZP_13196492.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU129]
gi|420191237|ref|ZP_14697170.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM037]
gi|420204182|ref|ZP_14709742.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM015]
gi|374816967|gb|EHR81158.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU118]
gi|374837889|gb|EHS01447.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU128]
gi|374838086|gb|EHS01643.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis VCU129]
gi|394257838|gb|EJE02743.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM037]
gi|394274196|gb|EJE18621.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM015]
Length = 256
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + + IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YNELQLNGQGS--DVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|336120017|ref|YP_004574795.1| short-chain Z-isoprenyl diphosphate synthase [Microlunatus
phosphovorus NM-1]
gi|334687807|dbj|BAK37392.1| short-chain Z-isoprenyl diphosphate synthase [Microlunatus
phosphovorus NM-1]
Length = 260
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+ +H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 192 IAQHLYTRGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 241
>gi|312138738|ref|YP_004006074.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
gi|311888077|emb|CBH47389.1| undecaprenyl diphosphate synthase [Rhodococcus equi 103S]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNF 78
VQ DKL + D + K + VE H++ + PDPD+ IR+SGE R S F
Sbjct: 161 VQSLLRDKLAAG------LTGDDLVKAMSVEGIDGHLYTSGQPDPDLVIRTSGEQRLSGF 214
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 215 LLWQSAYSEIWFTEAYWPEFRR 236
>gi|400977019|ref|ZP_10804250.1| undecaprenyl pyrophosphate synthetase [Salinibacterium sp. PAMC
21357]
Length = 261
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
+ +H++ PDPD+ IR+SGE R S+F+LWQT++ LY AL
Sbjct: 193 ISEHLYTKGQPDPDLVIRTSGEQRISDFMLWQTAHSELYFVEAL 236
>gi|296241890|ref|YP_003649377.1| undecaprenyl pyrophosphate synthetase [Thermosphaera aggregans DSM
11486]
gi|296094474|gb|ADG90425.1| Undecaprenyl pyrophosphate synthetase [Thermosphaera aggregans DSM
11486]
Length = 271
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEE 98
K+D + I + V +K+++ +PDPD+ IR+SGE R SNFLLWQ++ LY W E
Sbjct: 192 KLDPNDISEEV-FKKYLYTNDSPDPDLIIRTSGEERISNFLLWQSAYSELYFCDVYWPEF 250
Query: 99 KK 100
+K
Sbjct: 251 RK 252
>gi|375102406|ref|ZP_09748669.1| undecaprenyl diphosphate synthase [Saccharomonospora cyanea NA-134]
gi|374663138|gb|EHR63016.1| undecaprenyl diphosphate synthase [Saccharomonospora cyanea NA-134]
Length = 259
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L++ DE + K++DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 169 LRQYADEGRTIQELAKILDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 228
Query: 89 YSPAALW 95
+ A W
Sbjct: 229 WFTEAYW 235
>gi|160902093|ref|YP_001567674.1| undecaprenyl diphosphate synthase [Petrotoga mobilis SJ95]
gi|160359737|gb|ABX31351.1| undecaprenyl diphosphate synthase [Petrotoga mobilis SJ95]
Length = 245
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 33 SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
++ LKEK + TI K D++ ++++ P PD+ IR++GE R SNFLLWQ++ LY
Sbjct: 150 NKILKEK--KTTITK-EDIDSNLYLPDVPYPDLIIRTAGEERLSNFLLWQSAYSELYFTE 206
Query: 93 ALW 95
LW
Sbjct: 207 TLW 209
>gi|410865611|ref|YP_006980222.1| Undecaprenyl pyrophosphate synthase [Propionibacterium
acidipropionici ATCC 4875]
gi|410822252|gb|AFV88867.1| Undecaprenyl pyrophosphate synthase [Propionibacterium
acidipropionici ATCC 4875]
Length = 273
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+ +H++ PDPD+ IR+SGE R S FL+WQ+++ Y ALW + +K
Sbjct: 205 IAEHLYTKGQPDPDLIIRTSGEQRLSGFLMWQSAHSEFYFCEALWPDFRK 254
>gi|404482327|ref|ZP_11017554.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales bacterium
OBRC5-5]
gi|404344488|gb|EJZ70845.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales bacterium
OBRC5-5]
Length = 235
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 24 EYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
E+ D KE I+E+ I +D + PDPD+ IR+SGE R SNFLLWQ
Sbjct: 145 EHIVDDAGAGVISKENINEELISSYLDTKN------LPDPDLLIRTSGELRVSNFLLWQI 198
Query: 84 SNCSLYSPAALW 95
+ Y LW
Sbjct: 199 AYSEFYITDTLW 210
>gi|373114690|ref|ZP_09528900.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|419840864|ref|ZP_14364250.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|371651364|gb|EHO16797.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|386906952|gb|EIJ71672.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 230
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
Q KE I E+ D+ H++ + PDP++ IR+SGE R SNFLLWQ + +Y
Sbjct: 148 QEKKESISEE------DISSHLYQNL-PDPELIIRTSGEFRISNFLLWQLAYAEIYVTDT 200
Query: 94 LW 95
LW
Sbjct: 201 LW 202
>gi|158334147|ref|YP_001515319.1| undecaprenyl pyrophosphate synthase [Acaryochloris marina
MBIC11017]
gi|359461943|ref|ZP_09250506.1| undecaprenyl pyrophosphate synthase [Acaryochloris sp. CCMEE 5410]
gi|158304388|gb|ABW26005.1| undecaprenyl diphosphate synthase [Acaryochloris marina MBIC11017]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+E++++ A PDPD+ IRSSGE R SN+LLWQ + Y W
Sbjct: 178 IEQYLYTAGTPDPDLLIRSSGELRLSNYLLWQLAYTEFYFTDVFW 222
>gi|148642156|ref|YP_001272669.1| undecaprenyl pyrophosphate synthase, UppS [Methanobrevibacter
smithii ATCC 35061]
gi|222444664|ref|ZP_03607179.1| hypothetical protein METSMIALI_00277 [Methanobrevibacter smithii
DSM 2375]
gi|261350796|ref|ZP_05976213.1| di-trans,poly-cis-decaprenylcistransferase [Methanobrevibacter
smithii DSM 2374]
gi|148551173|gb|ABQ86301.1| undecaprenyl pyrophosphate synthase, UppS [Methanobrevibacter
smithii ATCC 35061]
gi|222434229|gb|EEE41394.1| di-trans,poly-cis-decaprenylcistransferase [Methanobrevibacter
smithii DSM 2375]
gi|288860414|gb|EFC92712.1| di-trans,poly-cis-decaprenylcistransferase [Methanobrevibacter
smithii DSM 2374]
Length = 254
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEK 99
+DED I K +++ A DP++ IR+SGE R S FLLWQ+S LY +LW E +
Sbjct: 181 VDEDLISK------NLYTAGLDDPNLIIRTSGEERLSGFLLWQSSYSELYFCESLWPELR 234
Query: 100 K 100
K
Sbjct: 235 K 235
>gi|384105530|ref|ZP_10006447.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus imtechensis
RKJ300]
gi|432343053|ref|ZP_19592262.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
wratislaviensis IFP 2016]
gi|383835493|gb|EID74919.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus imtechensis
RKJ300]
gi|430771920|gb|ELB87739.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus
wratislaviensis IFP 2016]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
VQ +KL + E + T+ ++ H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 161 VQSLLSEKLLAGLSGDELVKSITVDG---IDGHLYTSGQPDPDLVIRTSGEQRLSGFLLW 217
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ ++ A W E ++
Sbjct: 218 QSAYSEIWFTEAYWPEFRR 236
>gi|262340875|ref|YP_003283730.1| di-trans,poly-cis-decaprenylcistransferase [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272212|gb|ACY40120.1| di-trans,poly-cis-decaprenylcistransferase [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 247
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
H++ PD D+ IR+SGE R SNFLLWQ++ LY LW + +KK F
Sbjct: 180 HLYTKDLPDVDLIIRTSGEQRISNFLLWQSAYAELYFTNILWPDFRKKDFF 230
>gi|419961031|ref|ZP_14477041.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus opacus
M213]
gi|414573658|gb|EKT84341.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus opacus
M213]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
VQ +KL + E + T+ ++ H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 161 VQSLLSEKLLAGLSGDELVKSITVDG---IDGHLYTSGQPDPDLVIRTSGEQRLSGFLLW 217
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ ++ A W E ++
Sbjct: 218 QSAYSEIWFTEAYWPEFRR 236
>gi|222100167|ref|YP_002534735.1| UDP pyrophosphate synthase [Thermotoga neapolitana DSM 4359]
gi|221572557|gb|ACM23369.1| Undecaprenyl pyrophosphate synthetase [Thermotoga neapolitana DSM
4359]
Length = 233
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++E+T K ++++ PDPD+ IR+SGE R SNFL+WQ++ LY LW
Sbjct: 156 LNEETFKS------YLYLPDVPDPDLIIRTSGELRLSNFLIWQSAYSELYFTRKLW 205
>gi|408529575|emb|CCK27749.1| Undecaprenyl pyrophosphate synthase 1 [Streptomyces davawensis JCM
4913]
Length = 257
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 49 VDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
VD+E +H++ PDPD+ IR+SGE R S F+LWQT++ Y W
Sbjct: 184 VDIEMIGRHLYTGDQPDPDLVIRTSGEQRLSGFMLWQTAHSEYYFCDVFW 233
>gi|312796248|ref|YP_004029170.1| undecaprenyl pyrophosphate synthetase [Burkholderia rhizoxinica HKI
454]
gi|312168023|emb|CBW75026.1| Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) [Burkholderia
rhizoxinica HKI 454]
Length = 280
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 197 QHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYTELYFTDVFW 239
>gi|308270380|emb|CBX26992.1| Undecaprenyl pyrophosphate synthetase [uncultured Desulfobacterium
sp.]
Length = 247
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 33 SQALKE-KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
SQ +K+ KID D I V H++ A P PD+ IR+SGE R SNFLLWQ + ++
Sbjct: 159 SQKVKDSKIDPDLITDEF-VADHLYTAGMPYPDLLIRTSGEMRISNFLLWQIAYSEIFIT 217
Query: 92 AALW 95
LW
Sbjct: 218 DTLW 221
>gi|340755393|ref|ZP_08692083.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. D12]
gi|421500320|ref|ZP_15947331.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|313687220|gb|EFS24055.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. D12]
gi|402268734|gb|EJU18100.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 230
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
Q KE I E+ D+ H++ + PDP++ IR+SGE R SNFLLWQ + +Y
Sbjct: 148 QEKKESISEE------DISSHLYQNL-PDPELIIRTSGEFRISNFLLWQLAYAEIYVTDT 200
Query: 94 LW 95
LW
Sbjct: 201 LW 202
>gi|256823123|ref|YP_003147086.1| undecaprenyl diphosphate synthase [Kangiella koreensis DSM 16069]
gi|256796662|gb|ACV27318.1| undecaprenyl diphosphate synthase [Kangiella koreensis DSM 16069]
Length = 240
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
D + SQ L E T LV K++ AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 145 DIMQASQQLLTSGRELTEANLV---KYLATGTAPEPDLLIRTGGEKRISNFLLWQAAYSE 201
Query: 88 LYSPAALW 95
LY LW
Sbjct: 202 LYFSDVLW 209
>gi|88608842|ref|YP_506808.1| undecaprenyl diphosphate synthase [Neorickettsia sennetsu str.
Miyayama]
gi|88601011|gb|ABD46479.1| undecaprenyl diphosphate synthase [Neorickettsia sennetsu str.
Miyayama]
Length = 230
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 34 QALKEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
A+ I + + VDV+K +++ PDPD+ IR++GE R SNFLLWQ+S LY
Sbjct: 142 NAVSRMISDGLRAEEVDVQKFASYLYTDGIPDPDLIIRTAGEKRLSNFLLWQSSYSELYF 201
Query: 91 PAALW 95
LW
Sbjct: 202 CDTLW 206
>gi|392968658|ref|ZP_10334074.1| undecaprenyl diphosphate synthase [Fibrisoma limi BUZ 3]
gi|387843020|emb|CCH56128.1| undecaprenyl diphosphate synthase [Fibrisoma limi BUZ 3]
Length = 245
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 61 PDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
PDP++ IR+SGE R SNFLLWQ + LY P LW + ++K +
Sbjct: 180 PDPELMIRTSGEMRISNFLLWQLAYSELYMPDVLWPDFRRKHLY 223
>gi|111022819|ref|YP_705791.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
gi|110822349|gb|ABG97633.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus jostii
RHA1]
Length = 279
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 42 EDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEK 99
+D +K + ++ H++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W E +
Sbjct: 200 DDLVKSITIDGIDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFR 259
Query: 100 K 100
+
Sbjct: 260 R 260
>gi|42559825|sp|Q8GLK9.1|ISPT_AQUPY RecName: Full=Isoprenyl transferase
gi|23296071|gb|AAN12288.1| undecaprenyl pyrophosphate [Aquifex pyrophilus]
Length = 231
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+E+I E+ L+D ++ +PDPD+ IR++GE R SNFLLW + LY LW
Sbjct: 151 REEITEELFSSLLD------LSCSPDPDLLIRTAGEKRISNFLLWNLAYTELYFSETLW 203
>gi|390953601|ref|YP_006417359.1| undecaprenyl diphosphate synthase [Aequorivita sublithincola DSM
14238]
gi|390419587|gb|AFL80344.1| undecaprenyl diphosphate synthase [Aequorivita sublithincola DSM
14238]
Length = 247
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
+ H++ PD D+ IR+SGE R SNFLLWQ + LY LW + K F
Sbjct: 172 INNHLYTQNLPDVDLLIRTSGEQRISNFLLWQIAYAELYFTETLWPDYTKNHLF 225
>gi|381162995|ref|ZP_09872225.1| undecaprenyl diphosphate synthase [Saccharomonospora azurea NA-128]
gi|379254900|gb|EHY88826.1| undecaprenyl diphosphate synthase [Saccharomonospora azurea NA-128]
Length = 259
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 36 LKEKIDE----DTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L++ DE D + + +DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 169 LRQHADEGKTLDEVAETLDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 228
Query: 89 YSPAALW 95
+ A W
Sbjct: 229 WFTEAYW 235
>gi|254390203|ref|ZP_05005422.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|294814762|ref|ZP_06773405.1| Undecaprenyl pyrophosphate synthetase 1 [Streptomyces clavuligerus
ATCC 27064]
gi|326443141|ref|ZP_08217875.1| undecaprenyl pyrophosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197703909|gb|EDY49721.1| undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|294327361|gb|EFG09004.1| Undecaprenyl pyrophosphate synthetase 1 [Streptomyces clavuligerus
ATCC 27064]
Length = 256
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I K H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 179 LAETVDVDLISK------HLYTRGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFW 232
>gi|170584842|ref|XP_001897201.1| Undecaprenyl diphosphate synthase family protein [Brugia malayi]
gi|158595391|gb|EDP33948.1| Undecaprenyl diphosphate synthase family protein [Brugia malayi]
Length = 322
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I+E I + +D + DPD+ IR+SGETR S+FLLWQ S C +Y LW
Sbjct: 209 INECLISRCLDSR------FSRDPDLLIRTSGETRLSDFLLWQCSKCQIYFDGVLW 258
>gi|419760287|ref|ZP_14286567.1| undecaprenyl pyrophosphate synthase [Thermosipho africanus
H17ap60334]
gi|407514615|gb|EKF49426.1| undecaprenyl pyrophosphate synthase [Thermosipho africanus
H17ap60334]
Length = 225
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 21/82 (25%)
Query: 43 DTIKKLVD----------VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
D IKK++D + ++ PDPD+ IR+SGE R SNFL WQ++ LY
Sbjct: 137 DAIKKIIDSKISDIDEEKFREFLYFPDIPDPDLIIRTSGEMRLSNFLTWQSAYSELYFTD 196
Query: 93 ALW-----------LEEKKKRQ 103
LW +E+ KKRQ
Sbjct: 197 VLWPDFSREDLDRAIEDFKKRQ 218
>gi|424851299|ref|ZP_18275696.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus opacus
PD630]
gi|356665964|gb|EHI46035.1| di-trans,poly-cis-decaprenylcistransferase [Rhodococcus opacus
PD630]
Length = 267
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
VQ +KL + E + T+ ++ H++ + PDPD+ IR+SGE R S FLLW
Sbjct: 173 VQSLLSEKLLAGLSGDELVKSITVDG---IDGHLYTSGQPDPDLVIRTSGEQRLSGFLLW 229
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ ++ A W E ++
Sbjct: 230 QSAYSEIWFTEAYWPEFRR 248
>gi|359775027|ref|ZP_09278371.1| undecaprenyl pyrophosphate synthase [Arthrobacter globiformis NBRC
12137]
gi|359307625|dbj|GAB12200.1| undecaprenyl pyrophosphate synthase [Arthrobacter globiformis NBRC
12137]
Length = 257
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E D + + E D +++ D+ + ++ PDPD+ IR+SGE R S F
Sbjct: 160 VDAVRELLHDAVAHKADISELADSLSVE---DISRFLYTRGQPDPDLVIRTSGEQRLSGF 216
Query: 79 LLWQTSNCSLYSPAALW 95
L+WQ++ Y ALW
Sbjct: 217 LMWQSAYSEFYFCEALW 233
>gi|325107196|ref|YP_004268264.1| undecaprenyl pyrophosphate synthetase [Planctomyces brasiliensis
DSM 5305]
gi|324967464|gb|ADY58242.1| Undecaprenyl pyrophosphate synthetase [Planctomyces brasiliensis
DSM 5305]
Length = 260
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ D + +++ + E+IDE + M+ A PDPD+ +R+SGE R SNF
Sbjct: 163 IVDAVRHLAERVAAGELAPEEIDEQLLSD------SMYTAGMPDPDLVVRTSGEMRFSNF 216
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ S L+ W
Sbjct: 217 LLWQISYSELWVTDKFW 233
>gi|383449710|ref|YP_005356431.1| Di-trans,poly-cis-decaprenylcistransferase [Flavobacterium indicum
GPTSA100-9]
gi|380501332|emb|CCG52374.1| Di-trans,poly-cis-decaprenylcistransferase [Flavobacterium indicum
GPTSA100-9]
Length = 246
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I DTI + + + +H++ PD D+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 162 ISIDTIDESI-INQHLYTQNMPDVDLVIRTSGEHRISNFLLWQIAYAEFYFTEVLW 216
>gi|345868570|ref|ZP_08820553.1| di-trans,poly-cis-decaprenylcistransferase [Bizionia argentinensis
JUB59]
gi|344047081|gb|EGV42722.1| di-trans,poly-cis-decaprenylcistransferase [Bizionia argentinensis
JUB59]
Length = 227
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE I + H++ PD D+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 146 ENIDESVINE------HLYTQNLPDVDLLIRTSGEQRISNFLLWQIAYAEFYFTKVLW 197
>gi|91784115|ref|YP_559321.1| UDP pyrophosphate synthetase [Burkholderia xenovorans LB400]
gi|91688069|gb|ABE31269.1| Undecaprenyl pyrophosphate synthetase [Burkholderia xenovorans
LB400]
Length = 260
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
KL AL K E T + + H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 156 KLAEQSALAGKAVEVTEESFAE---HLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEF 212
Query: 89 YSPAALW 95
Y W
Sbjct: 213 YFTDTFW 219
>gi|403510342|ref|YP_006641980.1| di-trans,poly-cis-decaprenylcistransferase [Nocardiopsis alba ATCC
BAA-2165]
gi|402801042|gb|AFR08452.1| di-trans,poly-cis-decaprenylcistransferase [Nocardiopsis alba ATCC
BAA-2165]
Length = 253
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
Q L E++D + D+ +H++ PDPD+ IR+SGE R S F+LWQ+ + Y
Sbjct: 174 QELAERLD------IEDIARHLYTRGQPDPDLLIRTSGEQRLSGFMLWQSVHSEFYFCEV 227
Query: 94 LW 95
W
Sbjct: 228 FW 229
>gi|325002198|ref|ZP_08123310.1| undecaprenyl pyrophosphate synthase [Pseudonocardia sp. P1]
Length = 256
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ + PDPD+ IR+SGE R S FLLWQ+++ + A W
Sbjct: 179 LAETLDVDHIAE------HLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFWFCEAYW 232
Query: 96 LEEKK 100
E ++
Sbjct: 233 PEFRR 237
>gi|217077681|ref|YP_002335399.1| undecaprenyl diphosphate synthase [Thermosipho africanus TCF52B]
gi|217037536|gb|ACJ76058.1| undecaprenyl diphosphate synthase [Thermosipho africanus TCF52B]
Length = 225
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 21/82 (25%)
Query: 43 DTIKKLVD----------VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
D IKK++D + ++ PDPD+ IR+SGE R SNFL WQ++ LY
Sbjct: 137 DAIKKIIDSKISDIDEEKFREFLYFPDIPDPDLIIRTSGEMRLSNFLTWQSAYSELYFTD 196
Query: 93 ALW-----------LEEKKKRQ 103
LW +E+ KKRQ
Sbjct: 197 VLWPDFSREDLDRAIEDFKKRQ 218
>gi|374851804|dbj|BAL54753.1| undecaprenyl diphosphate synthase [uncultured Chloroflexi
bacterium]
Length = 248
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V +++F A PDPD+ IR+SGE R SNFL+WQ + Y W
Sbjct: 169 VSQYLFTAGVPDPDLIIRTSGELRISNFLIWQAAYAEWYVTPTYW 213
>gi|427712479|ref|YP_007061103.1| undecaprenyl pyrophosphate synthetase [Synechococcus sp. PCC 6312]
gi|427376608|gb|AFY60560.1| Undecaprenyl pyrophosphate synthetase [Synechococcus sp. PCC 6312]
Length = 249
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E H++ A PD D+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 EHHLYTAGLPDLDLLIRTSGEMRVSNFLLWQVAYAEIYVTDTLW 224
>gi|381166872|ref|ZP_09876085.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Phaeospirillum molischianum DSM 120]
gi|380683924|emb|CCG40897.1| Undecaprenyl pyrophosphate synthetase 2 (UPP synthetase 2)
(Di-trans,poly-cis-decaprenylcistransferase 2)
(Undecaprenyl diphosphate synthase 2) (UDS 2)
[Phaeospirillum molischianum DSM 120]
Length = 243
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V H+F + PDPD+ IR+SGE R SNFLLWQ + L LW
Sbjct: 173 VGSHLFTSGIPDPDLIIRTSGEKRISNFLLWQGAYAELVFIETLW 217
>gi|337290395|ref|YP_004629416.1| hypothetical protein CULC22_00784 [Corynebacterium ulcerans
BR-AD22]
gi|334698701|gb|AEG83497.1| hypothetical protein CULC22_00784 [Corynebacterium ulcerans
BR-AD22]
Length = 265
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E +++ A ++ D+ T+ + KH++ + PDPD+ IR+SGE R S F
Sbjct: 168 VDAVRELISGEVESGTAAEQIADKVTVDS---ISKHLYTSGQPDPDLVIRTSGEQRLSGF 224
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + ++ W
Sbjct: 225 LLWQAAYSEIWFTDTYW 241
>gi|224368821|ref|YP_002602982.1| protein UppS [Desulfobacterium autotrophicum HRM2]
gi|223691537|gb|ACN14820.1| UppS [Desulfobacterium autotrophicum HRM2]
Length = 255
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V + ++ A PDPD+ IR+SGE R SNF+LWQ + L+ LW
Sbjct: 176 VAERLYTAGQPDPDVLIRTSGEMRLSNFMLWQVAYAELFITDTLW 220
>gi|425450961|ref|ZP_18830784.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
7941]
gi|389767998|emb|CCI06787.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
7941]
Length = 249
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + + + +D ++++ A P+PD+ IRSSGE R SNFLLWQ
Sbjct: 152 EEIVQACQAIARQVQQGLVSPEAIDESLFAQYLYTAGIPNPDLLIRSSGEMRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYVTDTLW 224
>gi|385209109|ref|ZP_10035977.1| undecaprenyl diphosphate synthase [Burkholderia sp. Ch1-1]
gi|385181447|gb|EIF30723.1| undecaprenyl diphosphate synthase [Burkholderia sp. Ch1-1]
Length = 260
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
KL AL K E T + + H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 156 KLAEQSALAGKAVEVTEESFAE---HLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEF 212
Query: 89 YSPAALW 95
Y W
Sbjct: 213 YFTDTFW 219
>gi|425433927|ref|ZP_18814400.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9432]
gi|443657114|ref|ZP_21131833.1| di-trans,poly-cis-decaprenylcistransferase [Microcystis aeruginosa
DIANCHI905]
gi|159029860|emb|CAO90914.1| uppS [Microcystis aeruginosa PCC 7806]
gi|389678995|emb|CCH92155.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9432]
gi|443333243|gb|ELS47811.1| di-trans,poly-cis-decaprenylcistransferase [Microcystis aeruginosa
DIANCHI905]
Length = 249
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + + + +D ++++ A P+PD+ IRSSGE R SNFLLWQ
Sbjct: 152 EEIVQACQAIARQVQQGLVSPEAIDESLFAQYLYTAGIPNPDLLIRSSGEMRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYVTDTLW 224
>gi|150390446|ref|YP_001320495.1| undecaprenyl diphosphate synthase [Alkaliphilus metalliredigens
QYMF]
gi|149950308|gb|ABR48836.1| undecaprenyl diphosphate synthase [Alkaliphilus metalliredigens
QYMF]
Length = 248
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+EKH+ + PDPD+ IR+SGE R SNFLLWQ + Y W
Sbjct: 179 IEKHLDTSNIPDPDLLIRTSGEHRLSNFLLWQLAYSEFYFTETYW 223
>gi|390445377|ref|ZP_10233125.1| UDP pyrophosphate synthase [Nitritalea halalkaliphila LW7]
gi|389662322|gb|EIM73892.1| UDP pyrophosphate synthase [Nitritalea halalkaliphila LW7]
Length = 245
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVE--------KHMFMAVAPDPDITIRSSGETRPSNFLL 80
+ D QA+K I E K ++VE H+ A PDP++ +R+SGE R SNFLL
Sbjct: 141 RWDIQQAMK-GIAEKVANKEIEVEAISQELIASHLCTAEYPDPELLVRTSGEYRISNFLL 199
Query: 81 WQTSNCSLYSPAALW 95
WQ + LY LW
Sbjct: 200 WQMAYTELYFTDVLW 214
>gi|384567341|ref|ZP_10014445.1| undecaprenyl diphosphate synthase [Saccharomonospora glauca K62]
gi|384523195|gb|EIF00391.1| undecaprenyl diphosphate synthase [Saccharomonospora glauca K62]
Length = 259
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 36 LKEKIDEDT----IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L++ DE + K++DV+ +H++ + PDPD+ IR+SGE R S FLLWQ+++
Sbjct: 169 LRQYADEGKTIHELAKILDVDHISEHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEF 228
Query: 89 YSPAALW 95
+ A W
Sbjct: 229 WFTEAYW 235
>gi|294101872|ref|YP_003553730.1| undecaprenyl diphosphate synthase [Aminobacterium colombiense DSM
12261]
gi|293616852|gb|ADE57006.1| undecaprenyl diphosphate synthase [Aminobacterium colombiense DSM
12261]
Length = 228
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 35 ALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
K K+ E+TI+ ++++ PDPD+ IR+SGE R SNF LW+ S Y + L
Sbjct: 147 GYKGKVTEETIRS------YLYLPDLPDPDLIIRTSGEYRLSNFWLWEGSYSEFYFSSLL 200
Query: 95 W 95
W
Sbjct: 201 W 201
>gi|291547839|emb|CBL20947.1| undecaprenyl diphosphate synthase [Ruminococcus sp. SR1/5]
Length = 235
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+Q+ +D DG + + I EDTI+ +D A PDPD+ IR+SGE R SNFLLW
Sbjct: 141 MQKMAQDVKDG-KVEPDGITEDTIESYLDT------AGVPDPDLLIRTSGEQRLSNFLLW 193
Query: 82 QTSNCSLYSPAALW 95
Q + Y W
Sbjct: 194 QLAYSEFYFTPVAW 207
>gi|213961711|ref|ZP_03389977.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga
sputigena Capno]
gi|213955500|gb|EEB66816.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga
sputigena Capno]
Length = 240
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 166 LQQHLYTNNLPDVDLLIRTSGEYRISNFLLWQIAYAELYFAEVLW 210
>gi|91088189|ref|XP_972722.1| PREDICTED: similar to dehydrodolichyl diphosphate synthase
[Tribolium castaneum]
gi|270012136|gb|EFA08584.1| hypothetical protein TcasGA2_TC006239 [Tribolium castaneum]
Length = 285
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDED I ++ + +PDPD+ +R+SGE R S+FLLWQ SN + LW
Sbjct: 181 EDIDEDLI------SGALYTSCSPDPDLIVRTSGEVRFSDFLLWQISNSFISFTKVLW 232
>gi|377574424|ref|ZP_09803451.1| undecaprenyl pyrophosphate synthase [Mobilicoccus pelagius NBRC
104925]
gi|377536761|dbj|GAB48616.1| undecaprenyl pyrophosphate synthase [Mobilicoccus pelagius NBRC
104925]
Length = 253
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 42 EDTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
ED I+ L DVE H++ PDPD+ IR+SGE R FLLWQ+++ Y A W
Sbjct: 174 EDVIETL-DVETIAAHLYTRGQPDPDLVIRTSGEQRIGGFLLWQSTHSEFYFCEAYW 229
>gi|452945928|gb|EME51437.1| undecaprenyl pyrophosphate synthetase [Amycolatopsis decaplanina
DSM 44594]
Length = 263
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ + G ++L E + ++ L H++ A +PDPD+ IR+SGE R S FLLW
Sbjct: 174 VRDLVLEGAAGGKSLVEIAETVSVDAL---SAHLYTAGSPDPDLIIRTSGEVRLSGFLLW 230
Query: 82 QTSNCSLY 89
Q + LY
Sbjct: 231 QAKDSQLY 238
>gi|134296024|ref|YP_001119759.1| undecaprenyl pyrophosphate synthetase [Burkholderia vietnamiensis
G4]
gi|387902552|ref|YP_006332891.1| undecaprenyl pyrophosphate synthetase [Burkholderia sp. KJ006]
gi|134139181|gb|ABO54924.1| Undecaprenyl pyrophosphate synthetase [Burkholderia vietnamiensis
G4]
gi|387577444|gb|AFJ86160.1| Undecaprenyl pyrophosphate synthetase [Burkholderia sp. KJ006]
Length = 260
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 33 SQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
+QA++E + D ++ H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y
Sbjct: 159 AQAVREGREVDVTEEAF--APHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYAEFYFTD 216
Query: 93 ALW 95
W
Sbjct: 217 KYW 219
>gi|421748128|ref|ZP_16185765.1| undecaprenyl pyrophosphate synthetase [Cupriavidus necator HPC(L)]
gi|409773176|gb|EKN55022.1| undecaprenyl pyrophosphate synthetase [Cupriavidus necator HPC(L)]
Length = 256
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+D TI++ + H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 163 LDPSTIEE-STLAPHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDVFW 217
>gi|160900376|ref|YP_001565958.1| undecaprenyl diphosphate synthase [Delftia acidovorans SPH-1]
gi|160365960|gb|ABX37573.1| undecaprenyl diphosphate synthase [Delftia acidovorans SPH-1]
Length = 248
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++++ + +A PDPD+ IR+ GE R SNFLLWQ + L+ A+LW
Sbjct: 161 NLDRALALAHVPDPDLLIRTGGEMRISNFLLWQAAYSELFFSASLW 206
>gi|425458832|ref|ZP_18838318.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9808]
gi|389823860|emb|CCI27647.1| Undecaprenyl pyrophosphate synthase [Microcystis aeruginosa PCC
9808]
Length = 249
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIK-KLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
E+ + QA+ ++ + + + +D ++++ A P+PD+ IRSSGE R SNFLLWQ
Sbjct: 152 EEIVQACQAIARQVQQGLVSPEAIDESLFAQYLYTAGIPNPDLLIRSSGEMRISNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYVTDTLW 224
>gi|325286848|ref|YP_004262638.1| undecaprenyl pyrophosphate synthase [Cellulophaga lytica DSM 7489]
gi|324322302|gb|ADY29767.1| Undecaprenyl pyrophosphate synthase [Cellulophaga lytica DSM 7489]
Length = 246
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE + + H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 165 ENIDE------IIINNHLYTQNLPDVDLLIRTSGEHRISNFLLWQIAYAELYFTDVLW 216
>gi|297192366|ref|ZP_06909764.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces
pristinaespiralis ATCC 25486]
gi|197723032|gb|EDY66940.1| undecaprenyl pyrophosphate synthetase 1 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 253
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 45 IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ ++VDVE +H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 176 LAEIVDVEHISEHLYTRGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFW 229
>gi|453075689|ref|ZP_21978472.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus triatomae
BKS 15-14]
gi|452762569|gb|EME20864.1| short-chain Z-isoprenyl diphosphate synthase [Rhodococcus triatomae
BKS 15-14]
Length = 255
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
++ H++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W E ++
Sbjct: 187 IDGHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEFRR 236
>gi|261211374|ref|ZP_05925662.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC341]
gi|260839329|gb|EEX65955.1| undecaprenyl pyrophosphate synthetase [Vibrio sp. RC341]
Length = 250
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIKKL-VD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L +QAL K+ + ++ +D ++H+ MA PD D+ IR+SGE R SNF+LWQ
Sbjct: 144 DILQATQALAAKVTQGELQPTDIDEAVFKQHLTMADLPDVDLLIRTSGECRISNFMLWQL 203
Query: 84 SNCSLYSPAALW 95
+ +Y W
Sbjct: 204 AYAEMYFTPVFW 215
>gi|16081653|ref|NP_394020.1| hypothetical protein Ta0546 [Thermoplasma acidophilum DSM 1728]
gi|42560012|sp|Q9HKQ0.1|UPPS_THEAC RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|10639714|emb|CAC11686.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 258
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ D +DG + E +DE+ + +++ PDPD+ +R+SGE R SNFLLW
Sbjct: 168 IKRITRDAMDGKLNIDE-LDEEKFRM------YLYDGRIPDPDLILRTSGEERISNFLLW 220
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ LY W E K
Sbjct: 221 QSAYSELYFSDVYWPEFSK 239
>gi|398811734|ref|ZP_10570523.1| undecaprenyl diphosphate synthase [Variovorax sp. CF313]
gi|398079824|gb|EJL70662.1| undecaprenyl diphosphate synthase [Variovorax sp. CF313]
Length = 239
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
+ D +QA + + + +++ M +A PDPD+ IR+ GE R SNFLLWQ++
Sbjct: 138 GRWDIAQAAARLVAQGEAITEISLDRAMALAHVPDPDLFIRTGGEQRLSNFLLWQSAYAE 197
Query: 88 LYSPAALWLE 97
L+ LW E
Sbjct: 198 LFFSDKLWPE 207
>gi|379734303|ref|YP_005327808.1| Undecaprenyl pyrophosphate synthetase 1 [Blastococcus saxobsidens
DD2]
gi|378782109|emb|CCG01769.1| Undecaprenyl pyrophosphate synthetase 1 [Blastococcus saxobsidens
DD2]
Length = 259
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 47 KLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++DVE H++ PDPD+ IR+SGE R S FLLWQT+N + W
Sbjct: 184 EVLDVEHIADHLYTRGQPDPDLVIRTSGEQRMSGFLLWQTANAEFHFTDVYW 235
>gi|407648433|ref|YP_006812192.1| Undecaprenyl pyrophosphate synthetase 1 (UPP synthetase 1)
(Di-trans,poly-cis-decaprenylcistransferase 1)
(Undecaprenyl diphosphate synthase 1) (UDS 1) [Nocardia
brasiliensis ATCC 700358]
gi|407311317|gb|AFU05218.1| Undecaprenyl pyrophosphate synthetase 1 (UPP synthetase 1)
(Di-trans,poly-cis-decaprenylcistransferase 1)
(Undecaprenyl diphosphate synthase 1) (UDS 1) [Nocardia
brasiliensis ATCC 700358]
Length = 262
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 41 DEDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEE 98
ED ++ + + +H++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W E
Sbjct: 182 GEDLVQSITVNAIGQHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEF 241
Query: 99 KK 100
++
Sbjct: 242 RR 243
>gi|254414515|ref|ZP_05028281.1| undecaprenyl diphosphate synthase [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178745|gb|EDX73743.1| undecaprenyl diphosphate synthase [Coleofasciculus chthonoplastes
PCC 7420]
Length = 246
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H++ A DPD+ IR+SGE R SNFLLWQ + Y A W
Sbjct: 179 RHLYTANIGDPDLLIRTSGEMRLSNFLLWQMAYAEFYITDAFW 221
>gi|420199044|ref|ZP_14704728.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM031]
gi|394272730|gb|EJE17180.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus
epidermidis NIHLM031]
Length = 256
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
Y E +L+G + + IDE IK+ H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 166 YKELQLNGQGS--DVIDEALIKR------HLMTHSYPDPDLLIRTSGEQRISNFLIWQAS 217
Query: 85 NCSLYSPAALW--LEEKKKRQ 103
LW +EK+ R+
Sbjct: 218 YSEFIFNEKLWPDFDEKELRE 238
>gi|225849451|ref|YP_002729616.1| di-trans,poly-cis-decaprenylcistransferase [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644497|gb|ACN99547.1| di-trans,poly-cis-decaprenylcistransferase [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 234
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE++ ++ + PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 155 ESIDEESFRQF------FYRPEIPDPDLLIRTSGEKRISNFLLWQLAYTELYFTDVLW 206
>gi|427706006|ref|YP_007048383.1| undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7107]
gi|427358511|gb|AFY41233.1| Undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC 7107]
Length = 249
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 ESHLYTAGIDDPDLLIRTSGEMRLSNFLLWQMAYGEMYITDTLW 224
>gi|339484808|ref|YP_004696594.1| UDP pyrophosphate synthase [Nitrosomonas sp. Is79A3]
gi|338806953|gb|AEJ03195.1| Undecaprenyl pyrophosphate synthase [Nitrosomonas sp. Is79A3]
Length = 255
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ +++ M+ AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 173 NLAQYLSMSYAPEPDLFIRTGGECRISNFLLWQLAYTELYFTNTLW 218
>gi|159044044|ref|YP_001532838.1| undecaprenyl diphosphate synthase [Dinoroseobacter shibae DFL 12]
gi|157911804|gb|ABV93237.1| undecaprenyl diphosphate synthase [Dinoroseobacter shibae DFL 12]
Length = 243
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
QE +LD E +DE T+ + +D V PDPD+ IR+SGE R SNFLLW
Sbjct: 155 AQEVAAGRLDA-----ECVDETTLTRFLDT------CVLPDPDLVIRTSGEARISNFLLW 203
Query: 82 QTSNCSLYSPAALW 95
Q++ LW
Sbjct: 204 QSAYAEYEFIDTLW 217
>gi|379710776|ref|YP_005265981.1| Undecaprenyl pyrophosphate synthetase 1 (UPP synthetase 1)
(Di-trans,poly-cis-decaprenylcistransferase 1)
(Undecaprenyl diphosphate synthase 1) (UDS 1) [Nocardia
cyriacigeorgica GUH-2]
gi|374848275|emb|CCF65347.1| Undecaprenyl pyrophosphate synthetase 1 (UPP synthetase 1)
(Di-trans,poly-cis-decaprenylcistransferase 1)
(Undecaprenyl diphosphate synthase 1) (UDS 1) [Nocardia
cyriacigeorgica GUH-2]
Length = 262
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 41 DEDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEE 98
ED ++ + + +H++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W E
Sbjct: 182 GEDLVQSITVNAIGQHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEAYWPEF 241
Query: 99 KK 100
++
Sbjct: 242 RR 243
>gi|119471163|ref|ZP_01613695.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
[Alteromonadales bacterium TW-7]
gi|119445819|gb|EAW27101.1| undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
[Alteromonadales bacterium TW-7]
Length = 259
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H+ MA P+PD+ IR+ G+ R SNFLLWQ + LY LW
Sbjct: 179 IAQHISMADQPEPDLLIRTGGDVRISNFLLWQAAYAELYFTETLW 223
>gi|449267802|gb|EMC78704.1| Dehydrodolichyl diphosphate synthase [Columba livia]
Length = 333
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++K ++ +PDPD+ IR+SGE R S+FLLWQTS+ L + LW E
Sbjct: 188 LDKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPE 234
>gi|172037217|ref|YP_001803718.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
gi|354553898|ref|ZP_08973204.1| undecaprenyl diphosphate synthase [Cyanothece sp. ATCC 51472]
gi|171698671|gb|ACB51652.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
gi|353554615|gb|EHC24005.1| undecaprenyl diphosphate synthase [Cyanothece sp. ATCC 51472]
Length = 250
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE K+ +++ + A DPD+ IR+SGE R SN+LLWQ + +Y LW
Sbjct: 170 ETIDEAVFKQ------YLYTSGAKDPDLLIRTSGEMRLSNYLLWQMAYTEIYFTEVLW 221
>gi|113868030|ref|YP_726519.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha H16]
gi|113526806|emb|CAJ93151.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha H16]
Length = 256
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 177 HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDVFW 218
>gi|14520788|ref|NP_126263.1| hypothetical protein PAB0394 [Pyrococcus abyssi GE5]
gi|13633995|sp|Q9V157.1|UPPS_PYRAB RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|5458004|emb|CAB49494.1| uppS probable undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)
[Pyrococcus abyssi GE5]
gi|380741330|tpe|CCE69964.1| TPA: hypothetical protein PAB0394 [Pyrococcus abyssi GE5]
Length = 264
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ D +DG + E IDE+ +KK ++++ PDPDI IR+ GE R SNF
Sbjct: 171 VDAVKDIVRDVMDGKLRV-EDIDEELLKK------YLYVPNMPDPDIVIRTGGEVRISNF 223
Query: 79 LLWQTSNCSLY 89
LL+Q + L+
Sbjct: 224 LLYQIAYSELF 234
>gi|257094440|ref|YP_003168081.1| UDP diphosphate synthase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046964|gb|ACV36152.1| undecaprenyl diphosphate synthase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 264
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
D+ H+ M AP+PD+ IR+ GE R SNFLLWQ + +Y LW E
Sbjct: 173 DLAPHLAMHYAPEPDLFIRTGGEQRISNFLLWQLAYSEIYFTDVLWPE 220
>gi|339326117|ref|YP_004685810.1| UDP pyrophosphate synthase [Cupriavidus necator N-1]
gi|338166274|gb|AEI77329.1| undecaprenyl pyrophosphate synthase UppS [Cupriavidus necator N-1]
Length = 256
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 177 HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDVFW 218
>gi|384084929|ref|ZP_09996104.1| UDP pyrophosphate synthetase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 254
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H+ +A P+PD+ IR+ GE R SNFL+WQ + Y LW
Sbjct: 171 DIARHLSLADGPEPDLLIRTGGEERISNFLIWQLAYTEFYFTDTLW 216
>gi|386287199|ref|ZP_10064374.1| undecaprenyl diphosphate synthase [gamma proteobacterium BDW918]
gi|385279731|gb|EIF43668.1| undecaprenyl diphosphate synthase [gamma proteobacterium BDW918]
Length = 245
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKIDEDTIK----KLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D + +++L E++ T+ + ++HM +A P PD+ IR++GE R SNFLLWQ
Sbjct: 146 DIVSAAKSLAEQVQAGTLALDDFDVALFDRHMSLADVPKPDLCIRTAGEQRISNFLLWQL 205
Query: 84 SNCSLYSPAALW 95
+ LY W
Sbjct: 206 AYSELYFTDCFW 217
>gi|154250176|ref|YP_001411001.1| undecaprenyl diphosphate synthase [Fervidobacterium nodosum
Rt17-B1]
gi|154154112|gb|ABS61344.1| undecaprenyl diphosphate synthase [Fervidobacterium nodosum
Rt17-B1]
Length = 239
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+K+DE++ + +++ PDPD+ IR+SGE R SNFL+WQ + LY LW E
Sbjct: 162 DKLDENSFRN------YLYAPDVPDPDLVIRTSGEMRISNFLIWQIAYSELYFSKLLWPE 215
>gi|354567445|ref|ZP_08986614.1| Undecaprenyl pyrophosphate synthase [Fischerella sp. JSC-11]
gi|353542717|gb|EHC12178.1| Undecaprenyl pyrophosphate synthase [Fischerella sp. JSC-11]
Length = 249
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++IDE T E+H++ DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 173 DEIDEATF------ERHLYTIGICDPDLLIRTSGEMRVSNFLLWQIAYSEIYITDTLW 224
>gi|383791172|ref|YP_005475746.1| undecaprenyl diphosphate synthase [Spirochaeta africana DSM 8902]
gi|383107706|gb|AFG38039.1| undecaprenyl diphosphate synthase [Spirochaeta africana DSM 8902]
Length = 237
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H+ A PDPD+ IR+ G+ R SNFLLW ++ LY LW
Sbjct: 164 TDIRQHLDTAALPDPDLIIRTGGDLRLSNFLLWGSAYSELYFTKILW 210
>gi|443671907|ref|ZP_21137005.1| Short-chain Z-isoprenyl diphosphate synthase [Rhodococcus sp.
AW25M09]
gi|443415545|emb|CCQ15343.1| Short-chain Z-isoprenyl diphosphate synthase [Rhodococcus sp.
AW25M09]
Length = 260
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 33 SQALKEKI-DEDTIKKL-VD-VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLY 89
S+ + E + ED + + VD ++ H++ + PDPD+ IR+SGE R S FLLWQ++ ++
Sbjct: 171 SEKIAEGVTGEDLVASINVDGIDSHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIW 230
Query: 90 SPAALWLEEKK 100
A W E ++
Sbjct: 231 FTEAYWPEFRR 241
>gi|332799212|ref|YP_004460711.1| UDP pyrophosphate synthase [Tepidanaerobacter acetatoxydans Re1]
gi|438002336|ref|YP_007272079.1| Undecaprenyl pyrophosphate synthetase [Tepidanaerobacter
acetatoxydans Re1]
gi|332696947|gb|AEE91404.1| Undecaprenyl pyrophosphate synthase [Tepidanaerobacter
acetatoxydans Re1]
gi|432179130|emb|CCP26103.1| Undecaprenyl pyrophosphate synthetase [Tepidanaerobacter
acetatoxydans Re1]
Length = 252
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
C D L G + +KIDE+ K+++ PDPD+ IR SGE R SNFLLWQ +
Sbjct: 160 CSDVLKGDLII-DKIDEERF------NKYLYTHDLPDPDLLIRPSGELRISNFLLWQIAY 212
Query: 86 CSLYSPAALWLEEK 99
L+ W E K
Sbjct: 213 TELWFTEIFWPEFK 226
>gi|389862707|ref|YP_006364947.1| Undecaprenyl pyrophosphate synthetase 1 [Modestobacter marinus]
gi|388484910|emb|CCH86452.1| Undecaprenyl pyrophosphate synthetase 1 [Modestobacter marinus]
Length = 259
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H++ PDPD+ IR+SGE R S FLLWQT+N + W
Sbjct: 191 IAEHLYTRGQPDPDLVIRTSGEQRLSGFLLWQTANAEFHFTDVYW 235
>gi|284033478|ref|YP_003383409.1| UDP diphosphate synthase [Kribbella flavida DSM 17836]
gi|283812771|gb|ADB34610.1| undecaprenyl diphosphate synthase [Kribbella flavida DSM 17836]
Length = 259
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 40 IDEDTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I + + + VDVE +H++ PDPD+ IR+SGE R FLLWQ++ Y ALW
Sbjct: 177 ISIEELAERVDVEHIAEHLYTKGQPDPDLVIRTSGEQRLGGFLLWQSALSEFYFCEALW 235
>gi|194289788|ref|YP_002005695.1| UDP pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Cupriavidus
taiwanensis LMG 19424]
gi|193223623|emb|CAQ69630.1| undecaprenyl pyrophosphate synthetase (di-trans,
poly-cis-decaprenylcistransferase) [Cupriavidus
taiwanensis LMG 19424]
Length = 256
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE + H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 167 ETIDESLLAP------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDVYW 218
>gi|443311663|ref|ZP_21041288.1| undecaprenyl diphosphate synthase [Synechocystis sp. PCC 7509]
gi|442778236|gb|ELR88504.1| undecaprenyl diphosphate synthase [Synechocystis sp. PCC 7509]
Length = 249
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H++ A PDPD+ IR+SGE R SNFLLWQ + +Y L+
Sbjct: 176 ISQHLYTANTPDPDLLIRTSGEMRLSNFLLWQLAYTEMYFTNILF 220
>gi|189485410|ref|YP_001956351.1| undecaprenyl pyrophosphate synthetase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287369|dbj|BAG13890.1| undecaprenyl pyrophosphate synthetase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 224
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 38 EKIDEDTIKKLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E++ + IKK + + ++ A PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 140 EEMSKQNIKKPTEEIISSFLYTAGQPDPDLLIRTSGEFRISNFLLWQIAYSEIYITDKLW 199
>gi|91775879|ref|YP_545635.1| UDP pyrophosphate synthetase [Methylobacillus flagellatus KT]
gi|91709866|gb|ABE49794.1| Undecaprenyl pyrophosphate synthetase [Methylobacillus flagellatus
KT]
Length = 250
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ ++ M AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 173 DLAAYLSMHYAPEPDLFIRTGGEQRVSNFLLWQLAYSELYFTETLW 218
>gi|48478450|ref|YP_024156.1| UDP pyrophosphate synthetase [Picrophilus torridus DSM 9790]
gi|73920271|sp|Q6KZ89.1|UPPS_PICTO RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|48431098|gb|AAT43963.1| undecaprenyl pyrophosphate synthetase [Picrophilus torridus DSM
9790]
Length = 255
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
G L KI D I + + +++ PDPD+ +R+SGE R SNFLLWQ++ LY
Sbjct: 169 GQDILNGKIKVDNINEEM-FRSYLYDKTLPDPDLILRTSGEERISNFLLWQSAYSELYFA 227
Query: 92 AALWLEEKK 100
W E +K
Sbjct: 228 DVNWPELRK 236
>gi|304314442|ref|YP_003849589.1| undecaprenyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
gi|302587901|gb|ADL58276.1| predicted undecaprenyl pyrophosphate synthase [Methanothermobacter
marburgensis str. Marburg]
Length = 255
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E IDED I + +++ A DP + IR+SGE R S FLLWQ+S LY +LW E
Sbjct: 180 EDIDEDMINR------NLYTAGLEDPHLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPE 233
Query: 98 EKK 100
+K
Sbjct: 234 LRK 236
>gi|404418489|ref|ZP_11000256.1| undecaprenyl pyrophosphate synthase [Staphylococcus arlettae
CVD059]
gi|403489082|gb|EJY94660.1| undecaprenyl pyrophosphate synthase [Staphylococcus arlettae
CVD059]
Length = 254
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
++L QA E I E I +H+F PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 168 EQLSKEQACAEDITEALI------SEHLFTNKYPDPDLLIRTSGEQRISNFLIWQVSYSE 221
Query: 88 LYSPAALW 95
LW
Sbjct: 222 FIFNEKLW 229
>gi|374339093|ref|YP_005095829.1| undecaprenyl diphosphate synthase [Marinitoga piezophila KA3]
gi|372100627|gb|AEX84531.1| undecaprenyl diphosphate synthase [Marinitoga piezophila KA3]
Length = 242
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ ++++ PDP++ IR+SGE R SNFLLWQ + LY LW
Sbjct: 160 DISTNLYLPDVPDPELIIRTSGEIRISNFLLWQLAYSELYFTDILW 205
>gi|315924485|ref|ZP_07920706.1| di-trans,poly-cis-decaprenylcistransferase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622189|gb|EFV02149.1| di-trans,poly-cis-decaprenylcistransferase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 239
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 34 QALKEKIDEDTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
QA+++ + E + + + H++ A PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 149 QAVRQIVAEGIVPEAITEQVFADHLYTAGLPDPDLVIRTSGEERLSNFLLWQNAYAEFIF 208
Query: 91 PAALW 95
LW
Sbjct: 209 DPVLW 213
>gi|312127158|ref|YP_003992032.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777177|gb|ADQ06663.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
hydrothermalis 108]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E +DE+ KK +++ PDPD+ IR SGE R SNFLLWQ S + LW +
Sbjct: 171 EDVDENLFKK------YLYTKDIPDPDLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPD 224
Query: 98 EKK 100
KK
Sbjct: 225 FKK 227
>gi|225181374|ref|ZP_03734818.1| undecaprenyl diphosphate synthase [Dethiobacter alkaliphilus AHT 1]
gi|225167955|gb|EEG76762.1| undecaprenyl diphosphate synthase [Dethiobacter alkaliphilus AHT 1]
Length = 254
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IDE+T V+ H++ A PDPD+ IR SGE R SNFLLWQ + L+ W
Sbjct: 178 IDEET------VDNHLYTADLPDPDLLIRPSGEIRLSNFLLWQLAYAELWFTDVYW 227
>gi|170076733|ref|YP_001733371.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7002]
gi|169884402|gb|ACA98115.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7002]
Length = 245
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 174 INDHLYTHGIPDPDLLIRTSGEMRLSNFLLWQMAYSEIYVTPTLW 218
>gi|428217305|ref|YP_007101770.1| undecaprenyl pyrophosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427989087|gb|AFY69342.1| Undecaprenyl pyrophosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 288
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E+H++ + +PD+ IR+SGE R SNFLLWQ + +Y ALW E
Sbjct: 220 EQHLYTSEIGNPDLLIRTSGEMRLSNFLLWQLAYTEIYFTEALWPE 265
>gi|386852645|ref|YP_006270658.1| undecaprenyl pyrophosphate synthetase [Actinoplanes sp. SE50/110]
gi|359840149|gb|AEV88590.1| undecaprenyl pyrophosphate synthetase [Actinoplanes sp. SE50/110]
Length = 256
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 45 IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +++DVE +H++ PDPD+ IR+SGE R S FLLWQ+++ Y A W
Sbjct: 179 LAEILDVEHIAEHLYTRGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFYFHDANW 232
>gi|312621979|ref|YP_004023592.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202446|gb|ADQ45773.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E +DE+ KK +++ PDPD+ IR SGE R SNFLLWQ S + LW +
Sbjct: 171 EDVDENLFKK------YLYTKDIPDPDLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPD 224
Query: 98 EKK 100
KK
Sbjct: 225 FKK 227
>gi|312135565|ref|YP_004002903.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor owensensis
OL]
gi|311775616|gb|ADQ05103.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor owensensis
OL]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E +DE+ KK +++ PDPD+ IR SGE R SNFLLWQ S + LW +
Sbjct: 171 EDVDEELFKK------YLYTYDIPDPDLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPD 224
Query: 98 EKK 100
KK
Sbjct: 225 FKK 227
>gi|358249020|ref|NP_001240235.1| uncharacterized protein LOC100812145 [Glycine max]
gi|255641051|gb|ACU20805.1| unknown [Glycine max]
Length = 149
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 47 KLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
KLVD+EK+M+MAVAPDPDI IR+SGE + F
Sbjct: 113 KLVDIEKNMYMAVAPDPDILIRTSGEAQTQQF 144
>gi|453053588|gb|EMF01051.1| Undecaprenyl pyrophosphate synthetase [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 253
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I K H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 176 LAESVDIDHITK------HLYTRGQPDPDLIIRTSGEQRLSGFMLWQSAHSEYYFCEVFW 229
>gi|189218030|ref|YP_001938672.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189184888|gb|ACD82073.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 260
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E + L G + + I+E+ K H+ + PDPD+ IR+SGE R SNFLLW
Sbjct: 165 VKEIAKKALHGQVKISD-INEELFKS------HLSTSFCPDPDLLIRTSGEMRLSNFLLW 217
Query: 82 QTSNCSLYSPAALW 95
++S Y W
Sbjct: 218 ESSYTEFYFTTTYW 231
>gi|126737624|ref|ZP_01753354.1| undecaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
gi|126721017|gb|EBA17721.1| undecaprenyl diphosphate synthase [Roseobacter sp. SK209-2-6]
Length = 249
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EK+D++T+ + +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 171 EKVDQETLPRYLDTH------VLPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLW 222
>gi|148261538|ref|YP_001235665.1| undecaprenyl diphosphate synthase [Acidiphilium cryptum JF-5]
gi|326405027|ref|YP_004285109.1| UDP pyrophosphate synthetase [Acidiphilium multivorum AIU301]
gi|338980224|ref|ZP_08631522.1| Undecaprenyl diphosphate synthase [Acidiphilium sp. PM]
gi|146403219|gb|ABQ31746.1| Undecaprenyl pyrophosphate synthetase [Acidiphilium cryptum JF-5]
gi|325051889|dbj|BAJ82227.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
gi|338208874|gb|EGO96695.1| Undecaprenyl diphosphate synthase [Acidiphilium sp. PM]
Length = 254
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 35 ALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
A+ +D T+ + + H+ A PDPD+ IR+SGE R SNFLLWQ + L AL
Sbjct: 157 AMAGTLDPTTVDETI-FAAHLSTAGMPDPDLVIRTSGEQRLSNFLLWQAAYAELVFDDAL 215
Query: 95 W 95
W
Sbjct: 216 W 216
>gi|73541566|ref|YP_296086.1| undecaprenyl pyrophosphate synthetase [Ralstonia eutropha JMP134]
gi|72118979|gb|AAZ61242.1| Undecaprenyl pyrophosphate synthetase [Ralstonia eutropha JMP134]
Length = 261
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE + H+ M+ AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 172 ESIDESVLAP------HLAMSYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDVFW 223
>gi|392407123|ref|YP_006443731.1| undecaprenyl diphosphate synthase [Anaerobaculum mobile DSM 13181]
gi|390620259|gb|AFM21406.1| undecaprenyl diphosphate synthase [Anaerobaculum mobile DSM 13181]
Length = 243
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++IDE++ + ++++ PDPD+ IR+SGE R SNF LWQ+S LY LW
Sbjct: 167 KQIDEESFRS------YLYLPDLPDPDLIIRTSGEKRISNFWLWQSSYSELYFTDVLW 218
>gi|225873247|ref|YP_002754706.1| UDP diphosphate synthase [Acidobacterium capsulatum ATCC 51196]
gi|225792464|gb|ACO32554.1| undecaprenyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 261
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D++++++ A PDPD+ IR+SGE R SN+LLWQ + + LW
Sbjct: 172 DIDRNLYTAYMPDPDLLIRTSGEMRISNYLLWQIAYTEILVTDRLW 217
>gi|312793073|ref|YP_004025996.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344996716|ref|YP_004799059.1| undecaprenyl pyrophosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180213|gb|ADQ40383.1| undecaprenyl diphosphate synthase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343964935|gb|AEM74082.1| Undecaprenyl pyrophosphate synthase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 248
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E +DE+ KK +++ PDPD+ IR SGE R SNFLLWQ S + LW +
Sbjct: 171 EDVDENLFKK------YLYTRDIPDPDLLIRPSGEMRVSNFLLWQISYTEFWFSNVLWPD 224
Query: 98 EKK 100
KK
Sbjct: 225 FKK 227
>gi|206603800|gb|EDZ40280.1| Di-trans-poly-cis-decaprenylcistransferase [Leptospirillum sp.
Group II '5-way CG']
Length = 264
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ ED K+++D D I + V +++ ++ P PD+ IR+SGE R SNF
Sbjct: 161 VRAVQRLAED------VQKDRLDPDQISETV-FSQYLETSILPPPDLLIRTSGEVRISNF 213
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + +Y LW
Sbjct: 214 LLWQLAYTEMYFTPTLW 230
>gi|126663128|ref|ZP_01734126.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteria bacterium BAL38]
gi|126624786|gb|EAZ95476.1| undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase)
[Flavobacteria bacterium BAL38]
Length = 251
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 15 LILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETR 74
++ V + + ++ + QA+ E I + +H++ PD D+ IR+SGE R
Sbjct: 146 IVQAVKKISDKVKNNIISEQAIDESI----------INQHLYTHNLPDVDLVIRTSGEHR 195
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + Y LW
Sbjct: 196 ISNFLLWQIAYAEFYFTDVLW 216
>gi|429742295|ref|ZP_19275938.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas catoniae
F0037]
gi|429157341|gb|EKX99941.1| di-trans,poly-cis-decaprenylcistransferase [Porphyromonas catoniae
F0037]
Length = 252
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDED + + H+ A PDPD+ IR+ GE R SN+LLWQ + L+ + W
Sbjct: 168 EDIDEDVLSR------HLDTASFPDPDLLIRTGGEERISNYLLWQVAYAELFFSSVYW 219
>gi|407713930|ref|YP_006834495.1| undecaprenyl diphosphate synthase [Burkholderia phenoliruptrix
BR3459a]
gi|407236114|gb|AFT86313.1| undecaprenyl diphosphate synthase [Burkholderia phenoliruptrix
BR3459a]
Length = 253
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 170 EHLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEFYFTDTFW 212
>gi|404380111|ref|ZP_10985151.1| undecaprenyl pyrophosphate synthase [Simonsiella muelleri ATCC
29453]
gi|404294422|gb|EFG30269.2| undecaprenyl pyrophosphate synthase [Simonsiella muelleri ATCC
29453]
Length = 244
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + +A AP+PD+ IR+ GETR SNF+LWQ + Y LW
Sbjct: 163 DLSTKLMLAEAPEPDLFIRTGGETRISNFMLWQMAYAEFYFTDVLW 208
>gi|384440497|ref|YP_005655221.1| undecaprenyl pyrophosphate synthase [Thermus sp. CCB_US3_UF1]
gi|359291630|gb|AEV17147.1| Undecaprenyl pyrophosphate synthase [Thermus sp. CCB_US3_UF1]
Length = 263
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+ + ++ A PDPD IR+SGE R S FLLWQ++ Y LW E +K
Sbjct: 195 IAQRLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|283458638|ref|YP_003363273.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
gi|283134688|dbj|BAI65453.1| undecaprenyl pyrophosphate synthase [Rothia mucilaginosa DY-18]
Length = 290
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ H++ A PDPD+ IR+SGE R S F+ WQ++ Y ALW
Sbjct: 221 DISSHLYTADMPDPDLLIRTSGEQRLSGFMTWQSAYSEFYFCRALW 266
>gi|441509195|ref|ZP_20991114.1| undecaprenyl pyrophosphate synthase [Gordonia aichiensis NBRC
108223]
gi|441446609|dbj|GAC49075.1| undecaprenyl pyrophosphate synthase [Gordonia aichiensis NBRC
108223]
Length = 249
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
+K + ++E +D T++ ++++++ PDPD+ IR+SGE R S FLLWQ++
Sbjct: 161 EKAEAGATMQELVDAVTVEA---IDENLYTKGQPDPDLVIRTSGEQRLSGFLLWQSAYSE 217
Query: 88 LYSPAALWLEEKK 100
++ A W E ++
Sbjct: 218 IWFTDAYWPEFRR 230
>gi|407716275|ref|YP_006837555.1| undecaprenyl pyrophosphate synthetase [Cycloclasticus sp. P1]
gi|407256611|gb|AFT67052.1| Undecaprenyl pyrophosphate synthetase [Cycloclasticus sp. P1]
Length = 247
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++E + A PDPD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 168 LNIEDFLSTAAIPDPDLFIRTGGEQRISNFLLWQIAYSELYFTDTLW 214
>gi|373454685|ref|ZP_09546549.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
succinatiphilus YIT 11850]
gi|371935548|gb|EHO63293.1| di-trans,poly-cis-decaprenylcistransferase [Dialister
succinatiphilus YIT 11850]
Length = 241
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I EDT+K H++ + A D D+ IR+ GE+R SNFLLWQ S LY LW
Sbjct: 162 ISEDTVKA------HLYPSDAMDVDLLIRTGGESRISNFLLWQASYSELYFTPVLW 211
>gi|152965074|ref|YP_001360858.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
gi|151359591|gb|ABS02594.1| undecaprenyl diphosphate synthase [Kineococcus radiotolerans
SRS30216]
Length = 253
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 43 DTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ + +++DVE H++ PDPD+ IR+SGE R S FLLWQ+++ + LW
Sbjct: 174 EELAEVLDVEHIAAHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSAHSEFFFTEVLW 229
>gi|29654679|ref|NP_820371.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|153207712|ref|ZP_01946359.1| undecaprenyl diphosphate synthase [Coxiella burnetii 'MSU Goat
Q177']
gi|154706962|ref|YP_001424019.1| UDP pyrophosphate synthetase [Coxiella burnetii Dugway 5J108-111]
gi|161830481|ref|YP_001597226.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 331]
gi|165919002|ref|ZP_02219088.1| undecaprenyl diphosphate synthase [Coxiella burnetii Q321]
gi|212212247|ref|YP_002303183.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212218980|ref|YP_002305767.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
gi|42559798|sp|Q83BV5.1|UPPS_COXBU RecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase
((2E,6E)-farnesyl-diphosphate specific); AltName:
Full=Ditrans,polycis-undecaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS; AltName: Full=Undecaprenyl pyrophosphate
synthase; Short=UPP synthase
gi|29541947|gb|AAO90885.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii RSA 493]
gi|120576408|gb|EAX33032.1| undecaprenyl diphosphate synthase [Coxiella burnetii 'MSU Goat
Q177']
gi|154356248|gb|ABS77710.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii Dugway
5J108-111]
gi|161762348|gb|ABX77990.1| undecaprenyl diphosphate synthase [Coxiella burnetii RSA 331]
gi|165917327|gb|EDR35931.1| undecaprenyl diphosphate synthase [Coxiella burnetii Q321]
gi|212010657|gb|ACJ18038.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuG_Q212]
gi|212013242|gb|ACJ20622.1| undecaprenyl pyrophosphate synthetase [Coxiella burnetii CbuK_Q154]
Length = 237
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 28 DKLDGSQALKEKI-DEDTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
D L Q + EKI +++ +L+ E ++ ++ P+PD+ IR+SGE R SNF+LWQ
Sbjct: 135 DILQAVQRMAEKIKNQELTSELMSAELFQNYLCLSDLPEPDLLIRTSGEQRLSNFMLWQF 194
Query: 84 SNCSLYSPAALW 95
+ +Y ALW
Sbjct: 195 AYTEIYFTPALW 206
>gi|406880696|gb|EKD28978.1| hypothetical protein ACD_79C00130G0003 [uncultured bacterium]
Length = 246
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +++ PDPD+ IR+SGE R SN+LLWQ S LY LW
Sbjct: 175 AEFSSYLYTKGMPDPDLLIRTSGEQRLSNYLLWQASYAELYFTNVLW 221
>gi|336319790|ref|YP_004599758.1| undecaprenyl diphosphate synthase [[Cellvibrio] gilvus ATCC 13127]
gi|336103371|gb|AEI11190.1| undecaprenyl diphosphate synthase [[Cellvibrio] gilvus ATCC 13127]
Length = 253
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 34 QALKEKIDEDTIKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
A ++ + D + + DVE H++ PDPD+ IR+SGE R FLLWQ+++ Y
Sbjct: 165 HASEQGVSIDEMAESFDVEHIAAHLYTKGQPDPDLVIRTSGEQRLGGFLLWQSAHSEFYF 224
Query: 91 PAALWLEEKK 100
A W + +K
Sbjct: 225 CEAYWPDFRK 234
>gi|428303857|ref|YP_007140682.1| undecaprenyl pyrophosphate synthase [Crinalium epipsammum PCC 9333]
gi|428245392|gb|AFZ11172.1| Undecaprenyl pyrophosphate synthase [Crinalium epipsammum PCC 9333]
Length = 249
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KH++ A DPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 182 KHLYTANLTDPDLLIRTSGEMRISNFLLWQLAYAEFYITETLW 224
>gi|384515307|ref|YP_005710399.1| hypothetical protein CULC809_00769 [Corynebacterium ulcerans 809]
gi|334696508|gb|AEG81305.1| hypothetical protein CULC809_00769 [Corynebacterium ulcerans 809]
Length = 265
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E +++ A + D+ T+ + KH++ + PDPD+ IR+SGE R S F
Sbjct: 168 VDAVRELISGEVESGTAAEHIADKVTVDS---ISKHLYTSGQPDPDLVIRTSGEQRLSGF 224
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + ++ W
Sbjct: 225 LLWQAAYSEIWFTDTYW 241
>gi|325284097|ref|YP_004256638.1| Undecaprenyl pyrophosphate synthase [Deinococcus proteolyticus MRP]
gi|324315906|gb|ADY27021.1| Undecaprenyl pyrophosphate synthase [Deinococcus proteolyticus MRP]
Length = 286
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 34 QALKEKIDEDTIKKL--VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
QA + + E+ L D+ +H++ A PDPD IR+SGE R S F+LWQ+ Y
Sbjct: 199 QAAQGRTLEEVAAGLHSADISRHLYTAGIPDPDFIIRTSGEVRLSGFMLWQSVYSEYYFC 258
Query: 92 AALW 95
W
Sbjct: 259 DVYW 262
>gi|282896305|ref|ZP_06304327.1| Di-trans-poly-cis-decaprenylcistransferase [Raphidiopsis brookii
D9]
gi|281198801|gb|EFA73680.1| Di-trans-poly-cis-decaprenylcistransferase [Raphidiopsis brookii
D9]
Length = 249
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIKKLVDVEK----HMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
++ + QA+ +K+ E + E+ H++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 152 QEIVQACQAIAQKVKEGLLNPEEISEELFAGHLYTAGIADPDLLIRTSGEMRLSNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYITDTLW 224
>gi|294782681|ref|ZP_06748007.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
1_1_41FAA]
gi|294481322|gb|EFG29097.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
1_1_41FAA]
Length = 230
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I+E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENINEE------DFSKYLYNDF-PDPDLLIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|254511763|ref|ZP_05123830.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
KLH11]
gi|221535474|gb|EEE38462.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
KLH11]
Length = 243
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ K +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 165 EDVDEETLPKYLDTR------VLPDPDLVIRTSGEARISNFLLWQSAYSEYEFSDTLW 216
>gi|374854469|dbj|BAL57350.1| undecaprenyl diphosphate synthase [uncultured gamma
proteobacterium]
Length = 251
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVA-----PDPDITIRSSGETRPSNFLLWQ 82
D + ++AL ++++ +K D+++ +F A P+PD+ IR+ GE R SNFLLWQ
Sbjct: 144 DIVQAARALARRVEQGELKS-QDIDETLFAAHLAGAELPEPDLFIRTGGEVRISNFLLWQ 202
Query: 83 TSNCSLYSPAALW 95
+ LY LW
Sbjct: 203 LAYTELYFSEVLW 215
>gi|374851922|dbj|BAL54868.1| undecaprenyl diphosphate synthase [uncultured Acidobacteria
bacterium]
Length = 270
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +++ A PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 190 ITRYLETADLPDPDLLIRTSGEMRVSNFLLWQIAYTELYVTETLW 234
>gi|422325232|ref|ZP_16406268.1| hypothetical protein HMPREF0737_01378 [Rothia mucilaginosa M508]
gi|353343236|gb|EHB87554.1| hypothetical protein HMPREF0737_01378 [Rothia mucilaginosa M508]
Length = 269
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ H++ A PDPD+ IR+SGE R S F+ WQ++ Y ALW
Sbjct: 200 DISSHLYTADMPDPDLLIRTSGEQRLSGFMTWQSAYSEFYFCRALW 245
>gi|295132496|ref|YP_003583172.1| undecaprenyl-pyrophosphate synthetase [Zunongwangia profunda
SM-A87]
gi|294980511|gb|ADF50976.1| undecaprenyl-pyrophosphate synthetase [Zunongwangia profunda
SM-A87]
Length = 246
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 34 QALKEKIDEDTIK--KLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLY 89
+AL K+ E T++ K+ D + + ++ PD D+ IR+SGE R SNFLLWQ + LY
Sbjct: 151 KALANKVKEGTLEPDKINDSLISESLYTKDIPDVDLMIRTSGEQRISNFLLWQMAYAELY 210
Query: 90 SPAALW 95
+ LW
Sbjct: 211 FTSILW 216
>gi|255327344|ref|ZP_05368418.1| undecaprenyl pyrophosphate synthetase [Rothia mucilaginosa ATCC
25296]
gi|255295624|gb|EET74967.1| undecaprenyl pyrophosphate synthetase [Rothia mucilaginosa ATCC
25296]
Length = 269
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ H++ A PDPD+ IR+SGE R S F+ WQ++ Y ALW
Sbjct: 200 DISSHLYTADMPDPDLLIRTSGEQRLSGFMTWQSAYSEFYFCRALW 245
>gi|224081661|ref|XP_002194939.1| PREDICTED: dehydrodolichyl diphosphate synthase [Taeniopygia
guttata]
Length = 333
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++K ++ +PDPD+ IR+SGE R S+FLLWQTS+ L + LW E
Sbjct: 188 LDKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPE 234
>gi|89889538|ref|ZP_01201049.1| undecaprenyl pyrophosphate synthetase [Flavobacteria bacterium
BBFL7]
gi|89517811|gb|EAS20467.1| undecaprenyl pyrophosphate synthetase [Flavobacteria bacterium
BBFL7]
Length = 244
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ I++DTI L ++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 164 DNINQDTINSL------LYTNYMPDVDLLIRTSGEQRISNFLLWQIAYAELYFTDVLW 215
>gi|323526484|ref|YP_004228637.1| UDP diphosphate synthase [Burkholderia sp. CCGE1001]
gi|323383486|gb|ADX55577.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1001]
Length = 260
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEFYFTDTFW 219
>gi|332706087|ref|ZP_08426159.1| undecaprenyl pyrophosphate synthetase [Moorea producens 3L]
gi|332355179|gb|EGJ34647.1| undecaprenyl pyrophosphate synthetase [Moorea producens 3L]
Length = 246
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H++ A DPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 179 RHLYTANVCDPDLLIRTSGEMRLSNFLLWQMAYGELYITDTLW 221
>gi|333921070|ref|YP_004494651.1| UDP diphosphate synthase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483292|gb|AEF41852.1| Undecaprenyl diphosphate synthase [Amycolicicoccus subflavus
DQS3-9A1]
Length = 256
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 36 LKEKIDEDTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPA 92
L E D + + + VE +H++ + PDPD+ IR+SGE R S FLLWQ++ ++
Sbjct: 170 LAEGRTGDELIESISVEGIAEHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTE 229
Query: 93 ALWLEEKK 100
A W E ++
Sbjct: 230 AYWPEFRR 237
>gi|296394377|ref|YP_003659261.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
gi|296181524|gb|ADG98430.1| undecaprenyl diphosphate synthase [Segniliparus rotundus DSM 44985]
Length = 264
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 48 LVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+ + +H++ + PDPD+ IR+SGE R S FLLWQ+ + ++ A W E ++
Sbjct: 193 VAGIGEHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSVHSEIWFTEAYWPEFRR 245
>gi|451818155|ref|YP_007454356.1| isoprenyl transferase UppS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784134|gb|AGF55102.1| isoprenyl transferase UppS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 252
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEE 98
KI ED I +++ V+ +++ PDPD+ IR SGE R SNFLLWQ + + W E
Sbjct: 171 KISEDDIDEIL-VQNYLYTKGIPDPDLIIRPSGEQRLSNFLLWQCAYSEFWYSHINWPEF 229
Query: 99 KKK 101
K+K
Sbjct: 230 KEK 232
>gi|315651640|ref|ZP_07904651.1| di-trans,poly-cis-decaprenylcistransferase [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315486094|gb|EFU76465.1| di-trans,poly-cis-decaprenylcistransferase [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 235
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
D ++ + KE I E+ I +D PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 149 DDVESGKLSKENISEELISSYLDTND------LPDPDLLIRTSGELRVSNFLLWQIAYSE 202
Query: 88 LYSPAALW 95
Y LW
Sbjct: 203 FYITDTLW 210
>gi|20094204|ref|NP_614051.1| undecaprenyl pyrophosphate synthase [Methanopyrus kandleri AV19]
gi|42559839|sp|Q8TXA7.1|UPPS_METKA RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|19887226|gb|AAM01981.1| Undecaprenyl pyrophosphate synthase [Methanopyrus kandleri AV19]
Length = 271
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++IDE T +K V ++ PDP++ IR+SGE R SNFLLW ++ LY W E
Sbjct: 196 DEIDEGTFRKYV------YVGDLPDPELIIRTSGEERLSNFLLWYSAYSELYFVDVYWPE 249
Query: 98 EKK 100
+K
Sbjct: 250 FRK 252
>gi|397653631|ref|YP_006494314.1| hypothetical protein CULC0102_0880 [Corynebacterium ulcerans 0102]
gi|393402587|dbj|BAM27079.1| hypothetical protein CULC0102_0880 [Corynebacterium ulcerans 0102]
Length = 265
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+E +++ A + D+ T+ + KH++ + PDPD+ IR+SGE R S F
Sbjct: 168 VDAVRELISGEVESGTAAEHIADKVTVDS---ISKHLYTSGQPDPDLVIRTSGEQRLSGF 224
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + ++ W
Sbjct: 225 LLWQAAYSEIWFTDTYW 241
>gi|347537051|ref|YP_004844476.1| Di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
branchiophilum FL-15]
gi|345530209|emb|CCB70239.1| Di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
branchiophilum FL-15]
Length = 246
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ KH++ PD D+ IR+SGE R SNFLLWQ + L+ LW
Sbjct: 172 INKHLYTHNLPDVDLLIRTSGEQRISNFLLWQIAYAELFFTDVLW 216
>gi|427733776|ref|YP_007053320.1| undecaprenyl pyrophosphate synthetase [Rivularia sp. PCC 7116]
gi|427368817|gb|AFY52773.1| Undecaprenyl pyrophosphate synthetase [Rivularia sp. PCC 7116]
Length = 249
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I+ED I K +++ A P PD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 167 EDINEDLINK------NLYTADIPTPDLLIRTSGEKRLSNFLLWQMAYSEMYFTDVLW 218
>gi|406965740|gb|EKD91342.1| Undecaprenyl diphosphate synthase [uncultured bacterium]
Length = 235
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 42 EDTIKKLVDVEK--------HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
++ IKK VDV K H++ +P++ IR+ G R SNFLLWQT+ LY
Sbjct: 150 KNIIKKGVDVNKINETTIDEHLYTKGDTNPELVIRTGGRIRLSNFLLWQTAYSELYFSKK 209
Query: 94 LW 95
LW
Sbjct: 210 LW 211
>gi|399029192|ref|ZP_10730213.1| undecaprenyl diphosphate synthase [Flavobacterium sp. CF136]
gi|398072981|gb|EJL64170.1| undecaprenyl diphosphate synthase [Flavobacterium sp. CF136]
Length = 246
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 172 INEHLYTQNLPDVDLLIRTSGEHRISNFLLWQIAYAELYFTDVLW 216
>gi|419718121|ref|ZP_14245457.1| di-trans,poly-cis-decaprenylcistransferase [Lachnoanaerobaculum
saburreum F0468]
gi|383305722|gb|EIC97071.1| di-trans,poly-cis-decaprenylcistransferase [Lachnoanaerobaculum
saburreum F0468]
Length = 235
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
D ++ + KE I E+ I +D PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 149 DDVESGKLSKENISEELISSYLDTND------LPDPDLLIRTSGELRVSNFLLWQIAYSE 202
Query: 88 LYSPAALW 95
Y LW
Sbjct: 203 FYITDTLW 210
>gi|240256454|ref|NP_568884.4| dehydrodolichyl diphosphate synthase 5 [Arabidopsis thaliana]
gi|83305680|sp|Q570Q8.2|DDPS5_ARATH RecName: Full=Dehydrodolichyl diphosphate synthase 5;
Short=Dedol-PP synthase 5
gi|8843800|dbj|BAA97348.1| cis-prenyltransferase homolog-like; undecaprenyl phosphate
synthetase-like [Arabidopsis thaliana]
gi|332009716|gb|AED97099.1| dehydrodolichyl diphosphate synthase 5 [Arabidopsis thaliana]
Length = 302
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 61 PDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
P+PD+ IR+SGE R SNF LWQ++ LY P LW
Sbjct: 242 PNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLW 276
>gi|289450413|ref|YP_003475248.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
gi|289184960|gb|ADC91385.1| di-trans,poly-cis-decaprenylcistransferase [Clostridiales genomosp.
BVAB3 str. UPII9-5]
Length = 261
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKK 101
D+ +++ PDP++ IR+ GE R SNFLLWQ++ L+S LW E +K
Sbjct: 182 DISGALYLPDVPDPEMIIRTGGEMRLSNFLLWQSAYAELFSSPKLWPEFTEK 233
>gi|153812432|ref|ZP_01965100.1| hypothetical protein RUMOBE_02831 [Ruminococcus obeum ATCC 29174]
gi|149831594|gb|EDM86681.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcus obeum ATCC
29174]
Length = 238
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+++ +D DG +E I EDTI +D A PDPD+ IR+SGE R SNFL+W
Sbjct: 144 MRKLAQDAADGRLNPQE-ITEDTISGYLDT------AGVPDPDLLIRTSGEQRLSNFLMW 196
Query: 82 QTSNCSLYSPAALW 95
Q + Y W
Sbjct: 197 QLAYTEFYFTDVAW 210
>gi|392426774|ref|YP_006467768.1| Undecaprenyl pyrophosphate synthetase [Desulfosporosinus
acidiphilus SJ4]
gi|391356737|gb|AFM42436.1| Undecaprenyl pyrophosphate synthetase [Desulfosporosinus
acidiphilus SJ4]
Length = 254
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ +D L+G Q ++E IDE +F PDPD+ IR+SGE R SNFLLW
Sbjct: 160 VKKMSQDVLEGKQTIEE-IDEKLF------SDKLFTGGLPDPDLLIRTSGEMRLSNFLLW 212
Query: 82 QTSNCSLYSPAALW 95
Q + W
Sbjct: 213 QLAYTEFLVVEEFW 226
>gi|297796815|ref|XP_002866292.1| hypothetical protein ARALYDRAFT_919084 [Arabidopsis lyrata subsp.
lyrata]
gi|297312127|gb|EFH42551.1| hypothetical protein ARALYDRAFT_919084 [Arabidopsis lyrata subsp.
lyrata]
Length = 245
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I+E+ ++K + + F P+PD+ IR+SGE R SNF LWQ++ LY P LW
Sbjct: 166 EDINEEAMEKELLTKCSEF----PNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLW 219
>gi|170692146|ref|ZP_02883309.1| undecaprenyl diphosphate synthase [Burkholderia graminis C4D1M]
gi|170142576|gb|EDT10741.1| undecaprenyl diphosphate synthase [Burkholderia graminis C4D1M]
Length = 260
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++ED+ + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 EVNEDSFAE------HLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEFYFTDTFW 219
>gi|209518712|ref|ZP_03267528.1| undecaprenyl diphosphate synthase [Burkholderia sp. H160]
gi|209500826|gb|EEA00866.1| undecaprenyl diphosphate synthase [Burkholderia sp. H160]
Length = 260
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++ED+ + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 EVNEDSFAE------HLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEFYFTDTFW 219
>gi|427402235|ref|ZP_18893307.1| di-trans,poly-cis-decaprenylcistransferase [Massilia timonae CCUG
45783]
gi|425719008|gb|EKU81949.1| di-trans,poly-cis-decaprenylcistransferase [Massilia timonae CCUG
45783]
Length = 249
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + L+ + W
Sbjct: 174 HLAMAYAPEPDLFIRTGGEERISNFLLWQLAYSELHFTSTFW 215
>gi|237742319|ref|ZP_04572800.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
gi|229429967|gb|EEO40179.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 4_1_13]
Length = 230
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 11/65 (16%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
DG + + EK D K+++ PDPD+ IR+SGE R SNFLLWQ + LY
Sbjct: 149 DGKENITEK----------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSELYI 197
Query: 91 PAALW 95
LW
Sbjct: 198 TDTLW 202
>gi|383862413|ref|XP_003706678.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Megachile
rotundata]
Length = 295
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
+ ++ E IDE+ I ++ +P+PD+ IR+SGE R S+FL+WQ SN
Sbjct: 171 EGIENGDIFPEDIDENLISN------SLYTHESPNPDLLIRTSGEVRFSDFLMWQVSNTC 224
Query: 88 LYSPAALW 95
+Y LW
Sbjct: 225 VYFTNVLW 232
>gi|422933308|ref|ZP_16966230.1| di-trans,poly-cis-decaprenylcistransferase, partial [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|339891237|gb|EGQ80245.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 215
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 136 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRVSNFLLWQIAYSELYITDTLW 187
>gi|170289872|ref|YP_001736688.1| undecaprenyl diphosphate synthase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173952|gb|ACB07005.1| undecaprenyl diphosphate synthase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 262
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLY 89
++ID+D I+ H++ PDPD+ IR+SGE R SNFLLWQ++ LY
Sbjct: 187 DEIDDDVIRM------HLYAPDLPDPDLIIRTSGEERLSNFLLWQSAYSELY 232
>gi|375013393|ref|YP_004990381.1| undecaprenyl diphosphate synthase [Owenweeksia hongkongensis DSM
17368]
gi|359349317|gb|AEV33736.1| undecaprenyl diphosphate synthase [Owenweeksia hongkongensis DSM
17368]
Length = 247
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ +++ A PDPD+ IR+SGE R SNFLLWQ + L+ LW
Sbjct: 172 IDANLYTADMPDPDLLIRTSGENRISNFLLWQIAYSELFFSDKLW 216
>gi|256833106|ref|YP_003161833.1| UDP diphosphate synthase [Jonesia denitrificans DSM 20603]
gi|256686637|gb|ACV09530.1| undecaprenyl diphosphate synthase [Jonesia denitrificans DSM 20603]
Length = 259
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ H++ PDP++ IR+SGE R FLLWQ+++ Y A W
Sbjct: 190 DIANHLYTKGQPDPELVIRTSGEQRLGGFLLWQSAHSEFYFCEAFW 235
>gi|254460539|ref|ZP_05073955.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
HTCC2083]
gi|206677128|gb|EDZ41615.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacteraceae bacterium
HTCC2083]
Length = 254
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
Q+ KLD E +DE+T+ K +D V PDPD+ IR+SGE R SNFLLW
Sbjct: 165 AQDVASGKLD-----PEIVDEETLPKYLDT------YVLPDPDLVIRTSGEARISNFLLW 213
Query: 82 QTSNCSLYSPAALW 95
Q++ LW
Sbjct: 214 QSAYSEYEFVETLW 227
>gi|62318659|dbj|BAD95141.1| dehydrodolichyl diphosphate synthase - like protein [Arabidopsis
thaliana]
Length = 146
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 61 PDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
P+PD+ IR+SGE R SNF LWQ++ LY P LW
Sbjct: 86 PNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLW 120
>gi|307729335|ref|YP_003906559.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1003]
gi|307583870|gb|ADN57268.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1003]
Length = 260
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEFYFTDTFW 219
>gi|227872427|ref|ZP_03990771.1| undecaprenyl diphosphate synthase [Oribacterium sinus F0268]
gi|227841724|gb|EEJ52010.1| undecaprenyl diphosphate synthase [Oribacterium sinus F0268]
Length = 245
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 58 AVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW----LEEKKK 101
A PDPD+ IR+SGE R SNFLLWQ++ Y + W LEE KK
Sbjct: 181 AGTPDPDLVIRTSGEFRTSNFLLWQSAYAEYYISSVYWPDFNLEELKK 228
>gi|407474022|ref|YP_006788422.1| di-trans,poly-cis-decaprenylcistransferase UppS [Clostridium
acidurici 9a]
gi|407050530|gb|AFS78575.1| di-trans,poly-cis-decaprenylcistransferase UppS [Clostridium
acidurici 9a]
Length = 253
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EK+DE+TIK+ +++ PDPD+ IR+SGE R SNFLL+Q + L LW
Sbjct: 177 EKVDENTIKE------YLYTKNQPDPDLFIRTSGERRLSNFLLYQIAYSELDFVDTLW 228
>gi|374370897|ref|ZP_09628887.1| undecaprenyl pyrophosphate synthase [Cupriavidus basilensis OR16]
gi|373097560|gb|EHP38691.1| undecaprenyl pyrophosphate synthase [Cupriavidus basilensis OR16]
Length = 276
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE + H+ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 186 ESVDESMLAP------HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDVFW 237
>gi|187924429|ref|YP_001896071.1| undecaprenyl diphosphate synthase [Burkholderia phytofirmans PsJN]
gi|187715623|gb|ACD16847.1| undecaprenyl diphosphate synthase [Burkholderia phytofirmans PsJN]
Length = 260
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEFYFTDTFW 219
>gi|296120537|ref|YP_003628315.1| undecaprenyl diphosphate synthase [Planctomyces limnophilus DSM
3776]
gi|296012877|gb|ADG66116.1| undecaprenyl diphosphate synthase [Planctomyces limnophilus DSM
3776]
Length = 312
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
E IDED I ++ + P+PD+ IR++GE R SNFLLWQ S L+ LW E
Sbjct: 229 EAIDEDLISARLNTRE------MPEPDLVIRTAGEMRLSNFLLWQISYAELFVTTTLWPE 282
Query: 98 EKK 100
++
Sbjct: 283 FRE 285
>gi|444304384|ref|ZP_21140177.1| undecaprenyl diphosphate synthase [Arthrobacter sp. SJCon]
gi|443483230|gb|ELT46132.1| undecaprenyl diphosphate synthase [Arthrobacter sp. SJCon]
Length = 253
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + ++ PDPD+ IR+SGE R S FL+WQ++ Y ALW
Sbjct: 184 DISRFLYTRGQPDPDLVIRTSGEQRLSGFLMWQSAYSEFYFCEALW 229
>gi|289765710|ref|ZP_06525088.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
gi|289717265|gb|EFD81277.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. D11]
Length = 230
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRVSNFLLWQIAYSELYITDTLW 202
>gi|425054646|ref|ZP_18458151.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
505]
gi|403035598|gb|EJY46984.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
505]
Length = 270
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQ E+ G + E+ID++ I H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQNIAEEAAKG-EIQAEEIDDELIAN------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|319953661|ref|YP_004164928.1| undecaprenyl pyrophosphate synthase [Cellulophaga algicola DSM
14237]
gi|319422321|gb|ADV49430.1| Undecaprenyl pyrophosphate synthase [Cellulophaga algicola DSM
14237]
Length = 246
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE I H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 165 ENIDETIINT------HLYTHDLPDVDLLIRTSGEHRISNFLLWQIAYAELYFTNVLW 216
>gi|148273420|ref|YP_001222981.1| putative undecaprenyl diphosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147831350|emb|CAN02306.1| putative undecaprenyl diphosphate synthase [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 261
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
+ +H++ + PDPD+ IR+SGE R S+F+LWQ+++ LY AL
Sbjct: 193 IGEHLYTSGQPDPDLVIRTSGEQRISDFMLWQSAHSELYFMEAL 236
>gi|84497880|ref|ZP_00996677.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
gi|84381380|gb|EAP97263.1| di-trans-poly-cis-decaprenylcistransferase [Janibacter sp.
HTCC2649]
Length = 267
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 36 LKEKIDEDT----IKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L E D T + + +DVE H++ PDPD+ IR+SGE R FLLWQ+++
Sbjct: 177 LLEHADRGTTIEELAEFLDVEHIADHLYTKGQPDPDLVIRTSGEQRLGGFLLWQSAHSEF 236
Query: 89 YSPAALWLEEKK 100
Y A W + +K
Sbjct: 237 YFCEAYWPDFRK 248
>gi|443316097|ref|ZP_21045557.1| undecaprenyl diphosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442784328|gb|ELR94208.1| undecaprenyl diphosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 251
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+ + H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 173 EDIDENLFGR------HLYTADLQDPDLLIRTSGEMRISNFLLWQLAYAEIYVTDTLW 224
>gi|282900561|ref|ZP_06308503.1| Di-trans-poly-cis-decaprenylcistransferase [Cylindrospermopsis
raciborskii CS-505]
gi|281194361|gb|EFA69316.1| Di-trans-poly-cis-decaprenylcistransferase [Cylindrospermopsis
raciborskii CS-505]
Length = 249
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 27 EDKLDGSQALKEKIDEDTIKKLVDVEK----HMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
++ + QA+ +K+ E + E+ H++ A DPD+ IR+SGE R SNFLLWQ
Sbjct: 152 QEIVQACQAIAQKVKEGLLNPEEISEELFAGHLYTAGITDPDLLIRTSGEMRLSNFLLWQ 211
Query: 83 TSNCSLYSPAALW 95
+ +Y LW
Sbjct: 212 MAYAEIYITDTLW 224
>gi|295676821|ref|YP_003605345.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1002]
gi|295436664|gb|ADG15834.1| undecaprenyl diphosphate synthase [Burkholderia sp. CCGE1002]
Length = 260
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLSMAYAPEPDLFIRTGGERRVSNFLLWQLAYTEFYFTDTFW 219
>gi|431756935|ref|ZP_19545567.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E3083]
gi|430620789|gb|ELB57591.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E3083]
Length = 270
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQ E+ G + E+ID++ I H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQNIAEEVAKG-EIQAEEIDDEVIAN------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|57641108|ref|YP_183586.1| undecaprenyl diphosphate synthase [Thermococcus kodakarensis KOD1]
gi|73920272|sp|Q5JGE1.1|UPPS_PYRKO RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|57159432|dbj|BAD85362.1| undecaprenyl diphosphate synthase [Thermococcus kodakarensis KOD1]
Length = 264
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E D L+G + E IDE+ IK+ +++ PDPDI IR+ GE R SNFLL+
Sbjct: 174 VREIVRDVLEG-KIKPEDIDEEAIKR------YLYYPNMPDPDIVIRTGGEVRISNFLLY 226
Query: 82 QTSNCSLY 89
Q + L+
Sbjct: 227 QIAYSELF 234
>gi|296128803|ref|YP_003636053.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
gi|296020618|gb|ADG73854.1| undecaprenyl diphosphate synthase [Cellulomonas flavigena DSM
20109]
Length = 253
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Query: 6 DVQPLKINSLI-----LPVPD-VQEYCEDKLDGSQALKEKIDEDTIKKLVDVE---KHMF 56
DVQ L +N+ + + D V+ + + +L D + + DVE +H++
Sbjct: 137 DVQGLHVNAAVGYGGRREIADAVRAFLRMHAEAGSSL------DELAEAFDVEHIAEHLY 190
Query: 57 MAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
PDPD+ IR+SGE R FLLWQ+++ Y A W
Sbjct: 191 TKGQPDPDLVIRTSGEQRLGGFLLWQSTHSEFYFCDAYW 229
>gi|322420122|ref|YP_004199345.1| undecaprenyl diphosphate synthase [Geobacter sp. M18]
gi|320126509|gb|ADW14069.1| undecaprenyl diphosphate synthase [Geobacter sp. M18]
Length = 248
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+ +F A PDPD+ IR+SGE R SNFLLWQ + LY W
Sbjct: 163 ESIDENAFTG------SLFTAGIPDPDLLIRTSGEMRISNFLLWQLAYAELYFTEVNW 214
>gi|387771324|ref|ZP_10127490.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella bettyae
CCUG 2042]
gi|386902529|gb|EIJ67369.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella bettyae
CCUG 2042]
Length = 239
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 3 KSDDVQPLKINSLILPVPDVQEY--CEDKLDGSQALKEKIDEDTIKKLVDV-----EKHM 55
K D + L N+ L + Y C D + +Q + +++ E I D+ + H+
Sbjct: 115 KIADAEALTANNQALTLNIAANYGGCWDIVQATQQIAQQVKEGKIDT-TDINEAFFQHHL 173
Query: 56 FMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
P D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 174 VTQEQPPVDLLIRTSGEQRISNFLLWQIAYAELYFSEVLW 213
>gi|339444270|ref|YP_004710274.1| hypothetical protein EGYY_06720 [Eggerthella sp. YY7918]
gi|338904022|dbj|BAK43873.1| hypothetical protein EGYY_06720 [Eggerthella sp. YY7918]
Length = 259
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H++ A PDPD+ IR+SGE R SNFLLWQ + LW
Sbjct: 191 RHLYTADIPDPDLLIRTSGEMRVSNFLLWQIAYAEFVCTEVLW 233
>gi|51892634|ref|YP_075325.1| UDP pyrophosphate synthase [Symbiobacterium thermophilum IAM 14863]
gi|51856323|dbj|BAD40481.1| undecaprenyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 256
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V +H++ A PDPD+ IR++GE R SNFLLWQ++ ++ W
Sbjct: 187 VRRHLYTADLPDPDLIIRTAGEMRLSNFLLWQSAYAEIWVTDVYW 231
>gi|419839511|ref|ZP_14362918.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus
haemolyticus HK386]
gi|386909371|gb|EIJ74046.1| di-trans,poly-cis-decaprenylcistransferase [Haemophilus
haemolyticus HK386]
Length = 239
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 11 KINSLILPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKL--VDVEKHMFMAVAPDPDIT 66
K +L L + C D + ++ L EK+ +E +++++ + ++H+ P D+
Sbjct: 125 KNTALTLNIAANYGGCWDIVQAAKQLAEKVKNNEMSVEEIDEIAFQRHLVTQDEPPVDLL 184
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNFLLWQ + LY LW
Sbjct: 185 IRTSGEQRISNFLLWQIAYAELYFSDVLW 213
>gi|357419889|ref|YP_004932881.1| undecaprenyl diphosphate synthase [Thermovirga lienii DSM 17291]
gi|355397355|gb|AER66784.1| undecaprenyl diphosphate synthase [Thermovirga lienii DSM 17291]
Length = 242
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V +++ PDPD+ IR+SGE R SNFLLWQ+S L+ LW
Sbjct: 171 VSFRSCLYLPDVPDPDLIIRTSGEMRLSNFLLWQSSYSELFFTETLW 217
>gi|384209175|ref|YP_005594895.1| undecaprenyl pyrophosphate synthetase [Brachyspira intermedia
PWS/A]
gi|343386825|gb|AEM22315.1| undecaprenyl pyrophosphate synthetase [Brachyspira intermedia
PWS/A]
Length = 240
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 35 ALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
A+ KID ++I + ++ +++ PDPD IR+SGE R SNFL++Q S LY L
Sbjct: 156 AINNKIDIESIDENF-IQNYLYTKGIPDPDFLIRTSGEYRLSNFLMYQASYSELYFTDIL 214
Query: 95 W 95
W
Sbjct: 215 W 215
>gi|257898232|ref|ZP_05677885.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com15]
gi|257836144|gb|EEV61218.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com15]
Length = 270
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQ E+ G + E+ID++ I H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQNIAEEVAKG-EIQAEEIDDEVIAN------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|253700114|ref|YP_003021303.1| UDP pyrophosphate synthase [Geobacter sp. M21]
gi|251774964|gb|ACT17545.1| undecaprenyl diphosphate synthase [Geobacter sp. M21]
Length = 249
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE ++ +F A PDPD+ IR+SGE R SNFLLWQ + LY W
Sbjct: 162 ETIDEGSLTG------SLFTAGIPDPDLLIRTSGEMRISNFLLWQLAYAELYFTDVNW 213
>gi|409095559|ref|ZP_11215583.1| undecaprenyl diphosphate synthase [Thermococcus zilligii AN1]
Length = 264
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E ++ L+G + ++IDED IK+ +++ PDPDI IR+ GE R SNFLL+
Sbjct: 174 VREIVQEALEG-RIRPDEIDEDLIKR------YLYHPNMPDPDIVIRTGGEVRISNFLLY 226
Query: 82 QTSNCSLY 89
Q + L+
Sbjct: 227 QIAYSELF 234
>gi|417839600|ref|ZP_12485774.1| Undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M19107]
gi|341952138|gb|EGT78676.1| Undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M19107]
Length = 239
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 11 KINSLILPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKL--VDVEKHMFMAVAPDPDIT 66
K +L L + C D + ++ L EK+ +E +++++ + ++H+ P D+
Sbjct: 125 KNTALTLNIAANYGGCWDIVQAAKQLAEKVKNNEMSVEEIDEIAFQRHLVTQDEPPVDLL 184
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNFLLWQ + LY LW
Sbjct: 185 IRTSGEQRISNFLLWQIAYAELYFSDVLW 213
>gi|331694815|ref|YP_004331054.1| UDP pyrophosphate synthase [Pseudonocardia dioxanivorans CB1190]
gi|326949504|gb|AEA23201.1| Undecaprenyl pyrophosphate synthase [Pseudonocardia dioxanivorans
CB1190]
Length = 255
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 44 TIKKLVDV------EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+I++L DV H++ + PDPD+ IR+SGE R S FLLWQ+++ + A W E
Sbjct: 174 SIEELADVLDVDHIAAHLYTSGQPDPDLIIRTSGEQRLSGFLLWQSAHSEFWFCEAYWPE 233
Query: 98 EKK 100
++
Sbjct: 234 FRR 236
>gi|319943822|ref|ZP_08018103.1| di-trans,poly-cis-decaprenylcistransferase [Lautropia mirabilis
ATCC 51599]
gi|319743055|gb|EFV95461.1| di-trans,poly-cis-decaprenylcistransferase [Lautropia mirabilis
ATCC 51599]
Length = 256
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKR 102
++ H+ +A AP+PD+ IR+ GE R SNFLLWQ + LY W E +R
Sbjct: 175 AELASHLSLAYAPEPDLFIRTGGEQRISNFLLWQLAYTELYFCECFWPEFNDER 228
>gi|221198318|ref|ZP_03571364.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2M]
gi|221208257|ref|ZP_03581261.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2]
gi|221215461|ref|ZP_03588425.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD1]
gi|221164645|gb|EED97127.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD1]
gi|221171905|gb|EEE04348.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2]
gi|221182250|gb|EEE14651.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CGD2M]
Length = 251
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 HLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYAEFYFTNKYW 210
>gi|150026133|ref|YP_001296959.1| di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
psychrophilum JIP02/86]
gi|149772674|emb|CAL44157.1| Di-trans,poly-cis-decaprenylcistransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 246
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ KH++ PD D+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 172 LNKHLYTHNLPDVDLVIRTSGEHRISNFLLWQIAYAEFYFTDVLW 216
>gi|326331047|ref|ZP_08197346.1| di-trans,poly-cis-decaprenylcistransferase [Nocardioidaceae
bacterium Broad-1]
gi|325951258|gb|EGD43299.1| di-trans,poly-cis-decaprenylcistransferase [Nocardioidaceae
bacterium Broad-1]
Length = 258
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 45 IKKLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +++DVE H++ PDPD+ IR+SGE R FLLWQ++ Y A W
Sbjct: 181 LAQIIDVEHIADHLYTKGQPDPDLVIRTSGEQRLGGFLLWQSAKSEFYFCEAYW 234
>gi|154500381|ref|ZP_02038419.1| hypothetical protein BACCAP_04048 [Bacteroides capillosus ATCC
29799]
gi|150270886|gb|EDM98169.1| di-trans,poly-cis-decaprenylcistransferase [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 251
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++F A PDPD+ IR SGE R SNFLLWQ++ Y LW
Sbjct: 182 YLFSAGVPDPDLVIRPSGEERISNFLLWQSAYAEYYFTDVLW 223
>gi|431796038|ref|YP_007222942.1| undecaprenyl diphosphate synthase [Echinicola vietnamensis DSM
17526]
gi|430786803|gb|AGA76932.1| undecaprenyl diphosphate synthase [Echinicola vietnamensis DSM
17526]
Length = 245
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+I ED I H+ PDP++ IR+SGE R SNFLLWQ + LY LW
Sbjct: 163 EEITEDMITS------HLLTKDYPDPELLIRTSGELRISNFLLWQLAYTELYFTEVLW 214
>gi|295395786|ref|ZP_06805974.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971321|gb|EFG47208.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 257
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 42 EDTIKKLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
ED I L + + +H++ PDPD+ IRSSGE R S FL+WQ++ + A W
Sbjct: 178 EDAINALTEERLAEHLYTKGQPDPDLIIRSSGEQRLSGFLIWQSAYSEFFFCEAYW 233
>gi|289523070|ref|ZP_06439924.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503613|gb|EFD24777.1| di-trans,poly-cis-decaprenylcistransferase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 223
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 33 SQALKEKIDEDTIKKLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
++ L K D D + ++ + ++++ PDPD+ IR+SGE R SNF LWQ+S LY
Sbjct: 132 NKILAAKTDCDDVSEIDEYYFRGYLYLPDVPDPDLIIRTSGEKRLSNFWLWQSSYSELYF 191
Query: 91 PAALW--LEEKKKRQ 103
LW +E K R+
Sbjct: 192 TDCLWPEFDEGKLRE 206
>gi|34763575|ref|ZP_00144510.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27886764|gb|EAA23902.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 230
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|19704661|ref|NP_604223.1| undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|42559837|sp|Q8RE08.1|ISPT_FUSNN RecName: Full=Isoprenyl transferase
gi|19714967|gb|AAL95522.1| Undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 230
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSELYITDVLW 202
>gi|296327939|ref|ZP_06870474.1| Di-trans,poly-cis-decaprenylcistransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154895|gb|EFG95677.1| Di-trans,poly-cis-decaprenylcistransferase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 230
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSELYITDVLW 202
>gi|260433806|ref|ZP_05787777.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417634|gb|EEX10893.1| undecaprenyl pyrophosphate synthetase 1 [Silicibacter
lacuscaerulensis ITI-1157]
Length = 243
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ K +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 165 EDVDEETLPKYLDTR------VLPDPDLVIRTSGEARISNFLLWQSAYSEYEFVDTLW 216
>gi|386819904|ref|ZP_10107120.1| undecaprenyl diphosphate synthase [Joostella marina DSM 19592]
gi|386425010|gb|EIJ38840.1| undecaprenyl diphosphate synthase [Joostella marina DSM 19592]
Length = 245
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 171 INNHLYTQDLPDVDLLIRTSGEHRISNFLLWQIAYAELYFTKTLW 215
>gi|373108732|ref|ZP_09523013.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CCUG 10230]
gi|423129598|ref|ZP_17117273.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CCUG 12901]
gi|423133262|ref|ZP_17120909.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CIP 101113]
gi|423328858|ref|ZP_17306665.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CCUG 3837]
gi|371645977|gb|EHO11494.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CCUG 10230]
gi|371648648|gb|EHO14136.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CCUG 12901]
gi|371649318|gb|EHO14799.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CIP 101113]
gi|404604420|gb|EKB04054.1| di-trans,poly-cis-decaprenylcistransferase [Myroides odoratimimus
CCUG 3837]
Length = 246
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ + PD D+ +R+SGE R SNFLLWQ + LY LW
Sbjct: 172 INNHLYTSDLPDVDLLVRTSGEQRISNFLLWQIAYSELYFTEVLW 216
>gi|227551762|ref|ZP_03981811.1| undecaprenyl diphosphate synthase [Enterococcus faecium TX1330]
gi|257887077|ref|ZP_05666730.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,141,733]
gi|257895642|ref|ZP_05675295.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com12]
gi|293377747|ref|ZP_06623936.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
PC4.1]
gi|424766477|ref|ZP_18193830.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecalis
TX1337RF]
gi|430841501|ref|ZP_19459420.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1007]
gi|431033132|ref|ZP_19490978.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1590]
gi|431108220|ref|ZP_19497371.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1613]
gi|431752111|ref|ZP_19540796.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2620]
gi|431762162|ref|ZP_19550724.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E3548]
gi|227179067|gb|EEI60039.1| undecaprenyl diphosphate synthase [Enterococcus faecium TX1330]
gi|257823131|gb|EEV50063.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium
1,141,733]
gi|257832207|gb|EEV58628.1| undecaprenyl pyrophosphate synthetase [Enterococcus faecium Com12]
gi|292643747|gb|EFF61868.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
PC4.1]
gi|402410452|gb|EJV42855.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
TX1337RF]
gi|430494277|gb|ELA70527.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1007]
gi|430564233|gb|ELB03417.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1590]
gi|430569344|gb|ELB08348.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1613]
gi|430614175|gb|ELB51164.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2620]
gi|430624854|gb|ELB61504.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E3548]
Length = 270
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQ E+ G + E+ID++ I H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQNIAEEVAKG-EIQAEEIDDEVIAN------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|254392806|ref|ZP_05007977.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|197706464|gb|EDY52276.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
Length = 202
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
DVE+++ A PD D+ IR+SGE R S FL WQT+ L+ AALW
Sbjct: 133 DVERYLSTAGLPDVDLVIRTSGERRLSGFLPWQTAYAELHFTAALW 178
>gi|170782747|ref|YP_001711081.1| undecaprenyl pyrophosphate synthetase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157317|emb|CAQ02504.1| putative undecaprenyl pyrophosphate synthetase [Clavibacter
michiganensis subsp. sepedonicus]
Length = 261
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
+ +H++ + PDPD+ IR+SGE R S+F+LWQ+++ LY AL
Sbjct: 193 IGEHLYTSGQPDPDLVIRTSGEQRISDFMLWQSAHSELYFMEAL 236
>gi|161524434|ref|YP_001579446.1| undecaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|189350811|ref|YP_001946439.1| undecaprenyl pyrophosphate synthetase [Burkholderia multivorans
ATCC 17616]
gi|421469395|ref|ZP_15917856.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans ATCC BAA-247]
gi|421475340|ref|ZP_15923301.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CF2]
gi|160341863|gb|ABX14949.1| undecaprenyl diphosphate synthase [Burkholderia multivorans ATCC
17616]
gi|189334833|dbj|BAG43903.1| undecaprenyl pyrophosphate synthetase [Burkholderia multivorans
ATCC 17616]
gi|400230027|gb|EJO59850.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans ATCC BAA-247]
gi|400230368|gb|EJO60155.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
multivorans CF2]
Length = 260
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 178 HLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYAEFYFTNKYW 219
>gi|86140715|ref|ZP_01059274.1| Undecaprenyl pyrophosphate synthase [Leeuwenhoekiella blandensis
MED217]
gi|85832657|gb|EAQ51106.1| Undecaprenyl pyrophosphate synthase [Leeuwenhoekiella blandensis
MED217]
Length = 246
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 172 IKEHLYTHDMPDVDLLIRTSGEQRISNFLLWQIAYAELYFTPVLW 216
>gi|256845598|ref|ZP_05551056.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_36A2]
gi|422338358|ref|ZP_16419318.1| hypothetical protein HMPREF9369_00403 [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|256719157|gb|EEU32712.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_36A2]
gi|355372274|gb|EHG19615.1| hypothetical protein HMPREF9369_00403 [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 230
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|399927684|ref|ZP_10785042.1| undecaprenyl pyrophosphate synthase [Myroides injenensis M09-0166]
Length = 246
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 172 INEHLYTHDLPDVDLLIRTSGEQRISNFLLWQIAYAELYFTEVLW 216
>gi|312070081|ref|XP_003137981.1| hypothetical protein LOAG_02395 [Loa loa]
gi|307766849|gb|EFO26083.1| di-trans,poly-cis-decaprenylcistransferase [Loa loa]
Length = 303
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I+E I + +D + DPD+ IR+SGETR S+FLLWQ S C +Y LW
Sbjct: 190 INEYLISRCLDSR------FSNDPDLLIRTSGETRLSDFLLWQCSKCYIYFDKVLW 239
>gi|373458101|ref|ZP_09549868.1| Undecaprenyl pyrophosphate synthase [Caldithrix abyssi DSM 13497]
gi|371719765|gb|EHO41536.1| Undecaprenyl pyrophosphate synthase [Caldithrix abyssi DSM 13497]
Length = 255
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
QE +LD + I+E+TI + ++ A PDPD+ IR+ GE R SNFLLW
Sbjct: 158 AQEIKAGRLD-----ERHINEETIAQF------LYTANQPDPDLIIRTGGEKRISNFLLW 206
Query: 82 QTSNCSLYSPAALW 95
Q + +Y W
Sbjct: 207 QIAYAEIYFTETAW 220
>gi|91202465|emb|CAJ72104.1| strongly similar to undecaprenyl diphosphate synthase [Candidatus
Kuenenia stuttgartiensis]
Length = 238
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWL 96
K KIDE T + +K+++M PDPD+ IR+ GE R SNFLLW+ S L+ W
Sbjct: 156 KLKIDEITEE---SFKKYLYMPNMPDPDLLIRTGGEMRISNFLLWEISYAELWVTDTYWP 212
Query: 97 EEKK 100
+ KK
Sbjct: 213 DFKK 216
>gi|377562877|ref|ZP_09792243.1| undecaprenyl pyrophosphate synthase [Gordonia sputi NBRC 100414]
gi|377529855|dbj|GAB37408.1| undecaprenyl pyrophosphate synthase [Gordonia sputi NBRC 100414]
Length = 260
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+ +K + + E +D T++ ++++++ PDPD+ IR+SGE R S FLLW
Sbjct: 166 VRAVLVEKAEAGATVDELVDAVTVEA---IDRNLYTKGQPDPDLVIRTSGEQRLSGFLLW 222
Query: 82 QTSNCSLYSPAALWLEEKK 100
Q++ ++ A W E ++
Sbjct: 223 QSAYSEIWFTDAYWPEFRR 241
>gi|433602624|ref|YP_007034993.1| Undecaprenyl pyrophosphate synthase 1 [Saccharothrix espanaensis
DSM 44229]
gi|407880477|emb|CCH28120.1| Undecaprenyl pyrophosphate synthase 1 [Saccharothrix espanaensis
DSM 44229]
Length = 259
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 36 LKEKIDEDTIKKLVDV------EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLY 89
LK TI++L +V +H++ + PDPD+ IR+SGE R S F+LWQ+++ +
Sbjct: 170 LKHAESGGTIEELAEVLDVDHIAEHLYTSGQPDPDLLIRTSGEQRLSGFMLWQSAHSEFW 229
Query: 90 SPAALWLEEKK 100
A W E ++
Sbjct: 230 FCEAYWPEFRR 240
>gi|395762172|ref|ZP_10442841.1| undecaprenyl pyrophosphate synthetase [Janthinobacterium lividum
PAMC 25724]
Length = 232
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + L+ W
Sbjct: 157 HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTELFFTDTFW 198
>gi|374312733|ref|YP_005059163.1| undecaprenyl pyrophosphate synthase [Granulicella mallensis
MP5ACTX8]
gi|358754743|gb|AEU38133.1| Undecaprenyl pyrophosphate synthase [Granulicella mallensis
MP5ACTX8]
Length = 304
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 38 EKIDEDTIKKLVD---VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
E +D D IK +D + +++ PDPD+ IR+SGE R SNFLLWQ + ++ L
Sbjct: 199 EGVD-DAIKARIDEPQLSANLYTGHMPDPDLLIRTSGEQRISNFLLWQIAYAEIFVTERL 257
Query: 95 W 95
W
Sbjct: 258 W 258
>gi|428206750|ref|YP_007091103.1| undecaprenyl pyrophosphate synthetase [Chroococcidiopsis thermalis
PCC 7203]
gi|428008671|gb|AFY87234.1| Undecaprenyl pyrophosphate synthetase [Chroococcidiopsis thermalis
PCC 7203]
Length = 248
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
Q +++I+ D I + +EK+++ A PD+ IR+SGE R SNFLLWQ + +Y
Sbjct: 161 QIQQQEIEIDEINE-NSIEKYLYTAGTSHPDLLIRTSGEMRLSNFLLWQMAYTEIYFTDI 219
Query: 94 LW 95
LW
Sbjct: 220 LW 221
>gi|417841365|ref|ZP_12487469.1| Undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M19501]
gi|341949403|gb|EGT76007.1| Undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M19501]
Length = 239
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 11 KINSLILPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKL--VDVEKHMFMAVAPDPDIT 66
K +L L + C D + ++ L EK+ +E +++++ + ++H+ P D+
Sbjct: 125 KNTALTLNIAANYGGCWDIVQAAKQLAEKVKNNEMSVEEIDEIAFQRHLVTQDEPPVDLL 184
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNFLLWQ + LY LW
Sbjct: 185 IRTSGEQRISNFLLWQIAYAELYFSDVLW 213
>gi|296109429|ref|YP_003616378.1| undecaprenyl diphosphate synthase [methanocaldococcus infernus ME]
gi|295434243|gb|ADG13414.1| undecaprenyl diphosphate synthase [Methanocaldococcus infernus ME]
Length = 266
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 30 LDGSQALKEKIDEDTI------KKLVDVEKHMFMAV--APDPDITIRSSGETRPSNFLLW 81
+D + + EK+ I K+L+D KH++ A P PD+ IR+SGE R SNFL+W
Sbjct: 171 VDAVRKIAEKVKRGEIEPEEINKELID--KHLYTAHLPYPYPDLIIRTSGEERISNFLIW 228
Query: 82 QTSNCSLYSPAALW 95
Q+S LY W
Sbjct: 229 QSSYSELYFCDVYW 242
>gi|443309882|ref|ZP_21039561.1| undecaprenyl diphosphate synthase [Synechocystis sp. PCC 7509]
gi|442780077|gb|ELR90291.1| undecaprenyl diphosphate synthase [Synechocystis sp. PCC 7509]
Length = 248
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 182 HLYTAGRSDPDLVIRTSGEMRISNFLLWQMAYSEIYVTDTLW 223
>gi|429743649|ref|ZP_19277194.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sp. oral
taxon 020 str. F0370]
gi|429164898|gb|EKY06992.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria sp. oral
taxon 020 str. F0370]
Length = 227
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + + AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 145 ADLNAELMLGDAPEPDLFIRTGGEMRISNFLLWQMAYAELYFTDTLW 191
>gi|237808852|ref|YP_002893292.1| UDP diphosphate synthase [Tolumonas auensis DSM 9187]
gi|237501113|gb|ACQ93706.1| undecaprenyl diphosphate synthase [Tolumonas auensis DSM 9187]
Length = 259
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 21 DVQEYCE---DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
D+ + C+ +K+ L E+IDE + + H+ MA PD D+ IR+ G+ R SN
Sbjct: 148 DIVQACQQIAEKVAQGGLLPEQIDESLLSQ------HLSMADIPDVDLLIRTGGDHRISN 201
Query: 78 FLLWQTSNCSLYSPAALW 95
FLLWQ + L+ LW
Sbjct: 202 FLLWQIAYAELFFTPVLW 219
>gi|294785113|ref|ZP_06750401.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_27]
gi|421145509|ref|ZP_15605375.1| undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. fusiforme ATCC 51190]
gi|294486827|gb|EFG34189.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_27]
gi|395488095|gb|EJG08984.1| undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum
subsp. fusiforme ATCC 51190]
Length = 230
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|258516350|ref|YP_003192572.1| UDP diphosphate synthase [Desulfotomaculum acetoxidans DSM 771]
gi|257780055|gb|ACV63949.1| undecaprenyl diphosphate synthase [Desulfotomaculum acetoxidans DSM
771]
Length = 266
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+TI + +++ + PDPD+ IR+SG+ R SNFLLWQ + + LW
Sbjct: 187 EAIDENTIGR------YLYTSELPDPDLLIRTSGDFRISNFLLWQLAYTEFWLTPVLW 238
>gi|428772405|ref|YP_007164193.1| undecaprenyl pyrophosphate synthetase [Cyanobacterium stanieri PCC
7202]
gi|428686684|gb|AFZ46544.1| Undecaprenyl pyrophosphate synthetase [Cyanobacterium stanieri PCC
7202]
Length = 251
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I+ED E H++ +PD+ IR+SGE R SNFLLWQ + +Y + LW
Sbjct: 172 EDINEDIF------ENHLYTKGIINPDLLIRTSGEMRLSNFLLWQMAYGEMYVTSTLW 223
>gi|392971863|ref|ZP_10337255.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus equorum
subsp. equorum Mu2]
gi|392509576|emb|CCI60545.1| di-trans,poly-cis-decaprenylcistransferase [Staphylococcus equorum
subsp. equorum Mu2]
Length = 254
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
DKL E I E+ I + H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 168 DKLTAEGLTSEAITEEMINE------HLMTHCYPDPDLLIRTSGEQRISNFLIWQVSYSE 221
Query: 88 LYSPAALW 95
LW
Sbjct: 222 FLFNEKLW 229
>gi|388456990|ref|ZP_10139285.1| undecaprenyl diphosphate synthase [Fluoribacter dumoffii Tex-KL]
Length = 234
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ E +LD E +DE K + ++ APDP++ IR+ GE R SNFLLW
Sbjct: 148 VRQVTEKRLD-----IENLDEKDFAKFLATQE------APDPELVIRTGGEIRLSNFLLW 196
Query: 82 QTSNCSLYSPAALW 95
Q + +Y LW
Sbjct: 197 QIAYSEIYYTPVLW 210
>gi|340360870|ref|ZP_08683334.1| di-trans,poly-cis-decaprenylcistransferase, partial [Actinomyces
sp. oral taxon 448 str. F0400]
gi|339882899|gb|EGQ72788.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 448 str. F0400]
Length = 129
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 36 LKEKID-----EDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
L+E+ D ED L D+ H++ PDPD+ IR+SGE R S FLLWQT +
Sbjct: 39 LRERADAGDSLEDVAATLSEEDITDHLYTKGQPDPDLVIRTSGEQRLSGFLLWQTVHSEF 98
Query: 89 YSPAALW 95
Y W
Sbjct: 99 YFCEVNW 105
>gi|260906823|ref|ZP_05915145.1| short-chain Z-isoprenyl diphosphate synthase [Brevibacterium linens
BL2]
Length = 253
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H++ PDPD+ IRSSGE R S FL+WQ++ Y A W
Sbjct: 185 ISEHLYTKGQPDPDLIIRSSGEQRLSGFLMWQSAYSEFYFCEAYW 229
>gi|253580860|ref|ZP_04858123.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847930|gb|EES75897.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 235
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ +++ +D DG + E+IDE +D A PDPD+ IR+SGE R SNF
Sbjct: 138 IRGIRKLAQDAADG-KVKPEEIDEHVFDNYLDT------AGIPDPDLMIRTSGELRLSNF 190
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + Y W
Sbjct: 191 LLWQMAYTEFYFTDVAW 207
>gi|269837766|ref|YP_003319994.1| UDP diphosphate synthase [Sphaerobacter thermophilus DSM 20745]
gi|269787029|gb|ACZ39172.1| undecaprenyl diphosphate synthase [Sphaerobacter thermophilus DSM
20745]
Length = 236
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 42 EDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+ ++LVD ++++ A P+PD+ IR+SGE R SNFLLWQ + + LW
Sbjct: 150 EEVTEELVD--RYLYTADLPEPDLIIRTSGEQRTSNFLLWQAAYAEYHFTPVLW 201
>gi|451344140|ref|ZP_21913202.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthia catenaformis
OT 569 = DSM 20559]
gi|449337140|gb|EMD16306.1| di-trans,poly-cis-decaprenylcistransferase [Eggerthia catenaformis
OT 569 = DSM 20559]
Length = 248
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KID D I + E+H+ + PD D+ IRSSGE+R SN+LLWQ S L LW
Sbjct: 165 HKIDIDDINESY-FERHLMTSGLPDVDLMIRSSGESRLSNYLLWQLSYSELMFVDTLW 221
>gi|332877974|ref|ZP_08445705.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332684078|gb|EGJ56944.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 240
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I+ED I ++H++ P+ D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 161 INEDII------QQHLYTYDLPNVDLLIRTSGEYRISNFLLWQIAYAELYFTDVLW 210
>gi|282891921|ref|ZP_06300400.1| hypothetical protein pah_c200o080 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338176266|ref|YP_004653076.1| undecaprenyl pyrophosphate synthase [Parachlamydia acanthamoebae
UV-7]
gi|281498181|gb|EFB40521.1| hypothetical protein pah_c200o080 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336480624|emb|CCB87222.1| undecaprenyl pyrophosphate synthase [Parachlamydia acanthamoebae
UV-7]
Length = 263
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKI E+ I K +D A DPD+ IR+SGE R SNFLLWQ S +Y LW
Sbjct: 188 EKITEEAIAKYLDT------ADIGDPDLLIRTSGEWRISNFLLWQISYAEVYVTDVLW 239
>gi|304316873|ref|YP_003852018.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433655016|ref|YP_007298724.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778375|gb|ADL68934.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293205|gb|AGB19027.1| undecaprenyl diphosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 253
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ + LDG L + IDE I +++ A PDPD+ IR SGE R SNF
Sbjct: 159 VNAVKKIGKSLLDGKIKLND-IDEQII------ADNLYTAGQPDPDLIIRPSGELRISNF 211
Query: 79 LLWQTSNCSLYSPAALW 95
+LWQ++ L+ LW
Sbjct: 212 MLWQSAYSELWFSDILW 228
>gi|23013454|ref|ZP_00053347.1| COG0020: Undecaprenyl pyrophosphate synthase [Magnetospirillum
magnetotacticum MS-1]
Length = 243
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V + +D DG A E +DED I + A PDPD+ IR+SGE R SNF
Sbjct: 148 VAAARVLAQDVADGKVA-AEDVDEDAINA------RLSTAGIPDPDMIIRTSGEQRISNF 200
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + L LW
Sbjct: 201 LLWQGAYAELVFMDTLW 217
>gi|398814383|ref|ZP_10573064.1| undecaprenyl diphosphate synthase [Brevibacillus sp. BC25]
gi|398036652|gb|EJL29861.1| undecaprenyl diphosphate synthase [Brevibacillus sp. BC25]
Length = 256
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ + PDPD+ IR+SGE R SNF+LWQ + L+ LW
Sbjct: 187 ISSHLYTSEIPDPDLLIRTSGEIRLSNFMLWQLAYTELWFTDVLW 231
>gi|373957447|ref|ZP_09617407.1| Undecaprenyl pyrophosphate synthase [Mucilaginibacter paludis DSM
18603]
gi|373894047|gb|EHQ29944.1| Undecaprenyl pyrophosphate synthase [Mucilaginibacter paludis DSM
18603]
Length = 246
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 14 SLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVE----KHMFMAVAPDPDITIRS 69
L+L + + + +QA+ K++ +K E +H+ + PDP++ IR+
Sbjct: 131 GLVLTLALSYSSRREIVQATQAIARKVESGELKAADITEEVFSQHLHTSNLPDPELLIRT 190
Query: 70 SGETRPSNFLLWQTSNCSLYSPAALW 95
SGE R SN+LLWQ + LY LW
Sbjct: 191 SGEYRISNYLLWQIAYAELYFTDKLW 216
>gi|296127608|ref|YP_003634860.1| undecaprenyl diphosphate synthase [Brachyspira murdochii DSM 12563]
gi|296019424|gb|ADG72661.1| undecaprenyl diphosphate synthase [Brachyspira murdochii DSM 12563]
Length = 238
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+ I + +++ PDPD+ IR+SGE R SNFL++Q S LY LW
Sbjct: 162 ENIDENFI------QNYLYTKDMPDPDLIIRTSGEARLSNFLMYQASYSELYFTDILW 213
>gi|403046813|ref|ZP_10902282.1| undecaprenyl pyrophosphate synthase [Staphylococcus sp. OJ82]
gi|402763509|gb|EJX17602.1| undecaprenyl pyrophosphate synthase [Staphylococcus sp. OJ82]
Length = 254
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
DKL E I E+ I + H+ PDPD+ IR+SGE R SNFL+WQ S
Sbjct: 168 DKLTAEGLTSEAITEEMINE------HLMTHCYPDPDLLIRTSGEQRISNFLIWQVSYSE 221
Query: 88 LYSPAALW 95
LW
Sbjct: 222 FLFNEKLW 229
>gi|89895288|ref|YP_518775.1| hypothetical protein DSY2542 [Desulfitobacterium hafniense Y51]
gi|89334736|dbj|BAE84331.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 256
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ CE L KE E+ +L+ +H+F + DPD+ IR+SGE R SNFLLW
Sbjct: 162 VRQLCEKVLK-----KELTPEEITGELIS--QHLFTSGLSDPDLLIRTSGELRVSNFLLW 214
Query: 82 QTSNCSLYSPAALW 95
Q + + LW
Sbjct: 215 QIAYTEIIVTECLW 228
>gi|219669722|ref|YP_002460157.1| undecaprenyl diphosphate synthase [Desulfitobacterium hafniense
DCB-2]
gi|219539982|gb|ACL21721.1| undecaprenyl diphosphate synthase [Desulfitobacterium hafniense
DCB-2]
Length = 256
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ CE L KE E+ +L+ +H+F + DPD+ IR+SGE R SNFLLW
Sbjct: 162 VRQLCEKVLK-----KELTPEEITGELIS--QHLFTSGLSDPDLLIRTSGELRVSNFLLW 214
Query: 82 QTSNCSLYSPAALW 95
Q + + LW
Sbjct: 215 QIAYTEIIVTECLW 228
>gi|346992611|ref|ZP_08860683.1| undecaprenyl diphosphate synthase [Ruegeria sp. TW15]
Length = 243
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ K +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 165 EDVDEETLPKYLDTR------VLPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLW 216
>gi|291459116|ref|ZP_06598506.1| di-trans,poly-cis-decaprenylcistransferase [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418370|gb|EFE92089.1| di-trans,poly-cis-decaprenylcistransferase [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 261
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 34 QALKEKIDEDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
QAL E + I+ L D + + A PDPD+ IR+SGE R SN+LLWQ + Y
Sbjct: 153 QALSEGRSREEIESLTEDDFSRLLDTAGMPDPDLVIRTSGEFRLSNYLLWQCAYSEYYIS 212
Query: 92 AALW 95
LW
Sbjct: 213 PVLW 216
>gi|416985064|ref|ZP_11938370.1| undecaprenyl diphosphate synthase [Burkholderia sp. TJI49]
gi|325519184|gb|EGC98649.1| undecaprenyl diphosphate synthase [Burkholderia sp. TJI49]
Length = 260
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 34 QALKEKIDEDTIKKLVDVE-------KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
QA K K+ E +++ +VE H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 152 QATK-KLVEQAVREGREVEVTEDAFAPHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYA 210
Query: 87 SLYSPAALW 95
Y W
Sbjct: 211 EFYFTDKYW 219
>gi|222054616|ref|YP_002536978.1| UDP pyrophosphate synthase [Geobacter daltonii FRC-32]
gi|221563905|gb|ACM19877.1| undecaprenyl diphosphate synthase [Geobacter daltonii FRC-32]
Length = 249
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE T +++ A P+PD IR+SGE R SNFLLWQ + LY W
Sbjct: 162 EEIDEKTFNN------YLYTAAMPEPDFLIRTSGEMRISNFLLWQLAYTELYFSDVNW 213
>gi|410694278|ref|YP_003624900.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Thiomonas sp.
3As]
gi|294340703|emb|CAZ89095.1| Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans,poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS) [Thiomonas sp.
3As]
Length = 245
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H+ ++ +PDPD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 167 LARHLALSHSPDPDLLIRTGGEHRISNFLLWQLAYTELYFSDILW 211
>gi|377820507|ref|YP_004976878.1| undecaprenyl diphosphate synthase [Burkholderia sp. YI23]
gi|357935342|gb|AET88901.1| undecaprenyl diphosphate synthase [Burkholderia sp. YI23]
Length = 260
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
D + ++ L + E + VD E +H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 149 DIMQAAKKLIAQSLETGVAARVDDESFAEHLAMAYAPEPDLFIRTGGEQRISNFLLWQLA 208
Query: 85 NCSLYSPAALW 95
Y W
Sbjct: 209 YTEFYFTDTYW 219
>gi|293570619|ref|ZP_06681670.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E980]
gi|431737465|ref|ZP_19526419.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1972]
gi|431739907|ref|ZP_19528826.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2039]
gi|291609290|gb|EFF38561.1| di-trans,poly-cis-decaprenylcistransferase [Enterococcus faecium
E980]
gi|430599122|gb|ELB36838.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1972]
gi|430604034|gb|ELB41534.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E2039]
Length = 270
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQ+ E+ G + E+ID++ I H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQKIAEEVAKG-EIQAEEIDDELIAN------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|56751258|ref|YP_171959.1| undecaprenyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299075|ref|YP_399283.1| undecaprenyl pyrophosphate synthase [Synechococcus elongatus PCC
7942]
gi|56686217|dbj|BAD79439.1| undecaprenyl pyrophosphate synthetase [Synechococcus elongatus PCC
6301]
gi|81167956|gb|ABB56296.1| Undecaprenyl pyrophosphate synthetase [Synechococcus elongatus PCC
7942]
Length = 251
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 LSSHLYTAGVTDPDLLIRTSGEKRLSNFLLWQLAYAEIYVTDTLW 225
>gi|421526794|ref|ZP_15973400.1| undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum ChDC
F128]
gi|402256902|gb|EJU07378.1| undecaprenyl pyrophosphate synthetase [Fusobacterium nucleatum ChDC
F128]
Length = 230
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 158 DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|311105987|ref|YP_003978840.1| di-trans,poly-cis-decaprenylcistransferase [Achromobacter
xylosoxidans A8]
gi|310760676|gb|ADP16125.1| di-trans,poly-cis-decaprenylcistransferase [Achromobacter
xylosoxidans A8]
Length = 254
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 47 KLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+LVD E+ H+ MA AP+PD+ IR+ GE R SNFL+WQ + Y W
Sbjct: 168 QLVDEERLSRHLSMAWAPEPDLFIRTGGEQRISNFLIWQMAYAEFYFTDRYW 219
>gi|88801352|ref|ZP_01116880.1| Undecaprenyl pyrophosphate synthase [Polaribacter irgensii 23-P]
gi|88782010|gb|EAR13187.1| Undecaprenyl pyrophosphate synthase [Polaribacter irgensii 23-P]
Length = 247
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++I+E TI H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 165 KEINEKTI------NNHLYTFNLPDVDLMIRTSGEHRISNFLLWQMAYAELYFTDVLW 216
>gi|383824909|ref|ZP_09980076.1| short (C15) chain Z-isoprenyl diphosphate [Mycobacterium xenopi
RIVM700367]
gi|383336207|gb|EID14612.1| short (C15) chain Z-isoprenyl diphosphate [Mycobacterium xenopi
RIVM700367]
Length = 262
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 27 EDKLDGSQAL--KEKIDEDTIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNF 78
++ +D +AL KE + T ++LVD + ++++ + PDPD+ IR+SGE R S F
Sbjct: 162 QEIVDAVRALLSKELANGATAEELVDAVTVEAISENLYTSGQPDPDLVIRTSGEQRLSGF 221
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ++ ++ A W
Sbjct: 222 LLWQSAYSEMWFTEAYW 238
>gi|212696917|ref|ZP_03305045.1| hypothetical protein ANHYDRO_01480 [Anaerococcus hydrogenalis DSM
7454]
gi|212676207|gb|EEB35814.1| hypothetical protein ANHYDRO_01480 [Anaerococcus hydrogenalis DSM
7454]
Length = 259
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
EKIDED D+ +++ PDPD+ IR+ G+ R SNFL++Q + Y LW +
Sbjct: 179 EKIDED------DISNYLYTKNMPDPDLLIRTGGDLRISNFLIYQMAYTEYYFTDVLWPD 232
Query: 98 EKKK 101
KK
Sbjct: 233 FSKK 236
>gi|431412558|ref|ZP_19511993.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1630]
gi|431759446|ref|ZP_19548060.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E3346]
gi|430589513|gb|ELB27641.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E1630]
gi|430626246|gb|ELB62832.1| undecaprenyl pyrophosphate synthase [Enterococcus faecium E3346]
Length = 270
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAP----DPDITIRSSGETR 74
V VQ+ E+ G + E+ID++ I H+ P DP++ IR+SGE R
Sbjct: 161 VTAVQKIAEEVAKG-EIQAEEIDDELIAN------HLMTGFLPKELQDPELMIRTSGEER 213
Query: 75 PSNFLLWQTSNCSLYSPAALW 95
SNFLLWQ + LY ALW
Sbjct: 214 ISNFLLWQIAYSELYFTKALW 234
>gi|409405994|ref|ZP_11254456.1| undecaprenyl pyrophosphate synthetase [Herbaspirillum sp. GW103]
gi|386434543|gb|EIJ47368.1| undecaprenyl pyrophosphate synthetase [Herbaspirillum sp. GW103]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 175 YLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFW 216
>gi|237747789|ref|ZP_04578269.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
OXCC13]
gi|229379151|gb|EEO29242.1| undecaprenyl pyrophosphate synthetase [Oxalobacter formigenes
OXCC13]
Length = 247
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ ++ ++ AP+PD+ IR+ GETR SNFLLWQ + LY W
Sbjct: 172 LSSYLALSYAPEPDLFIRTGGETRISNFLLWQLAYSELYFTETFW 216
>gi|390934916|ref|YP_006392421.1| undecaprenyl pyrophosphate synthase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570417|gb|AFK86822.1| Undecaprenyl pyrophosphate synthase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 253
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 32 GSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSP 91
GS L +ID I + + + +++ + PDPD+ IR SGE R SNF+LWQ++ L+
Sbjct: 166 GSSLLSGEIDLSDIDENI-IADNLYTSGQPDPDLIIRPSGELRISNFMLWQSAYSELWFS 224
Query: 92 AALWLEEKKK 101
LW + +KK
Sbjct: 225 DVLWPDFEKK 234
>gi|315225609|ref|ZP_07867418.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
F0287]
gi|420159258|ref|ZP_14666065.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
str. Holt 25]
gi|314944426|gb|EFS96466.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
F0287]
gi|394762556|gb|EJF44775.1| di-trans,poly-cis-decaprenylcistransferase [Capnocytophaga ochracea
str. Holt 25]
Length = 240
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 166 LQEHLYTYDLPDVDLLIRTSGEERISNFLLWQIAYAELYFTEVLW 210
>gi|254302824|ref|ZP_04970182.1| uppS gene product [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323016|gb|EDK88266.1| uppS gene product [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 230
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%)
Query: 61 PDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 168 PDPDLVIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|126659263|ref|ZP_01730400.1| hypothetical protein CY0110_30628 [Cyanothece sp. CCY0110]
gi|126619462|gb|EAZ90194.1| hypothetical protein CY0110_30628 [Cyanothece sp. CCY0110]
Length = 253
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E ++ PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 182 ENFLYTKGIPDPDLLIRTSGEMRLSNFLLWQLAYAEIYVTQTLW 225
>gi|428218240|ref|YP_007102705.1| undecaprenyl pyrophosphate synthetase [Pseudanabaena sp. PCC 7367]
gi|427990022|gb|AFY70277.1| Undecaprenyl pyrophosphate synthetase [Pseudanabaena sp. PCC 7367]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 180 QHLYQFGASDPDLLIRTSGEMRLSNFLLWQMAYAEIYFSEILW 222
>gi|357490675|ref|XP_003615625.1| Undecaprenyl diphosphate synthase [Medicago truncatula]
gi|355516960|gb|AES98583.1| Undecaprenyl diphosphate synthase [Medicago truncatula]
Length = 191
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
DGS L E IDE+ I+K ++ + F P+PD+ IR+SGE R SNF+LWQ + L+
Sbjct: 106 DGSLHL-EDIDENIIEKELETKCTEF----PNPDLLIRTSGELRVSNFMLWQLAYAELFF 160
Query: 91 PAALW 95
LW
Sbjct: 161 NQKLW 165
>gi|222110430|ref|YP_002552694.1| UDP diphosphate synthase [Acidovorax ebreus TPSY]
gi|221729874|gb|ACM32694.1| undecaprenyl diphosphate synthase [Acidovorax ebreus TPSY]
Length = 244
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 55 MFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
M MA PDPD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 165 MGMAHVPDPDLLIRTGGERRISNFLLWQAAYTELYFSDRLW 205
>gi|172036264|ref|YP_001802765.1| undecaprenyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354553058|ref|ZP_08972365.1| undecaprenyl diphosphate synthase [Cyanothece sp. ATCC 51472]
gi|171697718|gb|ACB50699.1| undecaprenyl pyrophosphate synthetase [Cyanothece sp. ATCC 51142]
gi|353554888|gb|EHC24277.1| undecaprenyl diphosphate synthase [Cyanothece sp. ATCC 51472]
Length = 253
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E ++ PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 182 ENFLYTKGIPDPDLLIRTSGEMRLSNFLLWQLAYAEIYVTQTLW 225
>gi|121594919|ref|YP_986815.1| undecaprenyl diphosphate synthase [Acidovorax sp. JS42]
gi|120606999|gb|ABM42739.1| undecaprenyl diphosphate synthase [Acidovorax sp. JS42]
Length = 244
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 55 MFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
M MA PDPD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 165 MGMAHVPDPDLLIRTGGERRISNFLLWQAAYTELYFSDRLW 205
>gi|452909905|ref|ZP_21958588.1| undecaprenyl diphosphate synthase [Kocuria palustris PEL]
gi|452834865|gb|EME37663.1| undecaprenyl diphosphate synthase [Kocuria palustris PEL]
Length = 253
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H++ PDPD+ IR+SGE R S FL+WQ++ + ALW
Sbjct: 184 DISEHLYTRGQPDPDLLIRTSGEQRLSGFLMWQSAYSEYHFCEALW 229
>gi|411117303|ref|ZP_11389790.1| Undecaprenyl pyrophosphate synthetase [Oscillatoriales
cyanobacterium JSC-12]
gi|410713406|gb|EKQ70907.1| Undecaprenyl pyrophosphate synthetase [Oscillatoriales
cyanobacterium JSC-12]
Length = 249
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+H++ DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 181 ERHLYTTGICDPDLLIRTSGEMRLSNFLLWQLAYGEIYVTDTLW 224
>gi|375106237|ref|ZP_09752498.1| undecaprenyl diphosphate synthase [Burkholderiales bacterium
JOSHI_001]
gi|374666968|gb|EHR71753.1| undecaprenyl diphosphate synthase [Burkholderiales bacterium
JOSHI_001]
Length = 244
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 21 DVQEYCEDKLDGSQALK-EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
D+ + C + +Q LK E I E + +L M M APDPD+ IR+ GE R SNFL
Sbjct: 140 DIVQACRQAV--AQGLKPEDITEQRLSRL------MAMDHAPDPDLFIRTGGEVRISNFL 191
Query: 80 LWQTSNCSLYSPAALW 95
LWQ + L LW
Sbjct: 192 LWQVAYSELVFTDCLW 207
>gi|296136575|ref|YP_003643817.1| undecaprenyl diphosphate synthase [Thiomonas intermedia K12]
gi|295796697|gb|ADG31487.1| undecaprenyl diphosphate synthase [Thiomonas intermedia K12]
Length = 245
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H+ ++ +PDPD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 167 LARHLALSHSPDPDLLIRTGGEHRISNFLLWQLAYTELYFSDILW 211
>gi|350544621|ref|ZP_08914206.1| Undecaprenyl pyrophosphate synthetase [Candidatus Burkholderia
kirkii UZHbot1]
gi|350527589|emb|CCD37765.1| Undecaprenyl pyrophosphate synthetase [Candidatus Burkholderia
kirkii UZHbot1]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTYW 219
>gi|331001981|ref|ZP_08325501.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae oral
taxon 107 str. F0167]
gi|330411777|gb|EGG91182.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae oral
taxon 107 str. F0167]
Length = 235
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+ +D + G+ + K+ I+E+ I +D + PDPD+ IR+SGE R SNFLLW
Sbjct: 144 INNIVDDTVSGAIS-KDDINEELISSYLDTKN------LPDPDLLIRTSGELRVSNFLLW 196
Query: 82 QTSNCSLYSPAALW 95
Q + Y LW
Sbjct: 197 QIAYSEFYITDTLW 210
>gi|294817708|ref|ZP_06776350.1| Undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
gi|326446583|ref|ZP_08221317.1| undecaprenyl diphosphate synthase [Streptomyces clavuligerus ATCC
27064]
gi|294322523|gb|EFG04658.1| Undecaprenyl pyrophosphate synthetase [Streptomyces clavuligerus
ATCC 27064]
Length = 300
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 36 LKEKIDEDTIKKL--VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
L+ + T + DVE+++ A PD D+ IR+SGE R S FL WQT+ L+ AA
Sbjct: 215 LRSGVTGGTAAAVRESDVERYLSTAGLPDVDLVIRTSGERRLSGFLPWQTAYAELHFTAA 274
Query: 94 LW 95
LW
Sbjct: 275 LW 276
>gi|442804883|ref|YP_007373032.1| undecaprenyl pyrophosphate synthase UppS [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442740733|gb|AGC68422.1| undecaprenyl pyrophosphate synthase UppS [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 246
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ K ++ PDPD+ IR+SGE R SNFL+WQ S Y LW
Sbjct: 174 EFRKRLYTEDIPDPDLMIRTSGEMRISNFLIWQCSYTEFYFTDVLW 219
>gi|410697881|gb|AFV76949.1| undecaprenyl diphosphate synthase [Thermus oshimai JL-2]
Length = 263
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+ + ++ A PDPD +R+SGE R S FLLWQ++ Y LW E +K
Sbjct: 195 IAERLYTAGLPDPDFIVRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRK 244
>gi|415953987|ref|ZP_11557315.1| Undecaprenyl pyrophosphate synthetase [Herbaspirillum frisingense
GSF30]
gi|407757191|gb|EKF67227.1| Undecaprenyl pyrophosphate synthetase [Herbaspirillum frisingense
GSF30]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 175 YLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFW 216
>gi|402309307|ref|ZP_10828302.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium sp. AS15]
gi|400372802|gb|EJP25740.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium sp. AS15]
Length = 238
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 31 DGSQALKEKIDED-TIKKLVD--VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
D S A+K + E+ I+ + D V+K+++ + PDPD+ IR+ GE R SNF+L++ S
Sbjct: 145 DLSHAIKNMMKENINIEDINDETVKKYLYTSYMPDPDLIIRTGGEIRLSNFMLYEASYSE 204
Query: 88 LYSPAALWLE 97
Y LW E
Sbjct: 205 FYFCDTLWPE 214
>gi|380022144|ref|XP_003694913.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 1
[Apis florea]
Length = 299
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 21 DVQEYCEDKLDGSQA---LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSN 77
++ +D ++G Q L E IDE+ V ++ + +PD+ IR+SGE R S+
Sbjct: 165 EITHAIKDVIEGVQCGDILSEDIDEEL------VSNCLYTNNSKNPDLLIRTSGEVRFSD 218
Query: 78 FLLWQTSNCSLYSPAALW 95
FL+WQ SN +Y LW
Sbjct: 219 FLMWQISNTCIYFSNVLW 236
>gi|311030096|ref|ZP_07708186.1| undecaprenyl pyrophosphate synthase [Bacillus sp. m3-13]
Length = 257
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++F + PDPD+ IR+SGE R SNF+LWQ + Y LW
Sbjct: 190 EYLFSNLLPDPDLLIRTSGEIRLSNFMLWQLAYAEFYFTDVLW 232
>gi|257867710|ref|ZP_05647363.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC30]
gi|257874037|ref|ZP_05653690.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC10]
gi|257801793|gb|EEV30696.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC30]
gi|257808201|gb|EEV37023.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC10]
Length = 266
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 30 LDGSQALKEKI--DEDTIKKLVD--VEKHMFMAVAP----DPDITIRSSGETRPSNFLLW 81
L QAL E++ E+ + KL + + H+ P DP++ IR+SGE R SNFLLW
Sbjct: 161 LTAVQALYEELAASEEALPKLTEDMLATHLMTGFLPNALRDPELVIRTSGEERISNFLLW 220
Query: 82 QTSNCSLYSPAALW 95
Q + L+ ALW
Sbjct: 221 QIAYSELFFTKALW 234
>gi|429758279|ref|ZP_19290796.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 181 str. F0379]
gi|429173436|gb|EKY14955.1| di-trans,poly-cis-decaprenylcistransferase [Actinomyces sp. oral
taxon 181 str. F0379]
Length = 224
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H++ PDPD+ IR+SGE R S F++WQ+++ Y W
Sbjct: 155 DIAEHLYTGDQPDPDLVIRTSGEQRLSGFMIWQSAHSEFYFCETYW 200
>gi|78066794|ref|YP_369563.1| UDP pyrophosphate synthetase [Burkholderia sp. 383]
gi|77967539|gb|ABB08919.1| Undecaprenyl pyrophosphate synthetase [Burkholderia sp. 383]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 34 QALKEKIDEDTIKKLVDVEK-------HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
QA K K+ E +++ +VE H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 152 QATK-KLIEQAVREGREVEVTEDAFAPHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYA 210
Query: 87 SLYSPAALW 95
Y W
Sbjct: 211 EFYFTDKYW 219
>gi|372208906|ref|ZP_09496708.1| undecaprenyl pyrophosphate synthase [Flavobacteriaceae bacterium
S85]
Length = 251
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++H++ PD D+ IR+SGE R SN+LLWQ + LY LW
Sbjct: 170 IQQHLYTHNLPDVDLMIRTSGEQRLSNYLLWQMAYAELYFTDVLW 214
>gi|371777081|ref|ZP_09483403.1| UDP diphosphate synthase [Anaerophaga sp. HS1]
Length = 247
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ D L G ++ E+I+ + + ++ PDP++ IR+SGE R SNF
Sbjct: 147 VEGVKKVAADILSGKLSI-EQINSEIFSRYLETSD------MPDPELLIRTSGELRISNF 199
Query: 79 LLWQTSNCSLYSPAALWLEEKKKRQF 104
LLWQ + LY LW + +K+ F
Sbjct: 200 LLWQIAYSELYFSDVLWPDFRKEHFF 225
>gi|421865681|ref|ZP_16297356.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
H111]
gi|358074262|emb|CCE48234.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
H111]
Length = 251
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 169 HLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYAEFYFTDKYW 210
>gi|163856843|ref|YP_001631141.1| undecaprenyl pyrophosphate synthase [Bordetella petrii DSM 12804]
gi|163260571|emb|CAP42873.1| undecaprenyl pyrophosphate synthetase [Bordetella petrii]
Length = 254
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++IDE + + H+ MA AP+PD+ IR+ GE R SNFL+WQ + LY W
Sbjct: 168 QRIDESHLAE------HLSMAWAPEPDLFIRTGGEQRISNFLIWQLAYAELYFTDQYW 219
>gi|374723905|gb|EHR75985.1| undecaprenyl diphosphate synthase [uncultured marine group II
euryarchaeote]
Length = 272
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKK 101
V ++ PDPD+ IR+SGE R SNFLLWQ + LY W +KK
Sbjct: 204 VSDRLYTGDMPDPDLVIRTSGEERISNFLLWQMAYSELYFTDVFWPSFQKK 254
>gi|332532242|ref|ZP_08408123.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038340|gb|EGI74785.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 259
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 3 KSDDVQPLKINSLILPVPDVQEYCE--DKLDGSQALKEKIDEDTIKKLVDV-----EKHM 55
K D L N+ L + Y D + ++ L ++ + T+ VD+ +HM
Sbjct: 125 KVDAAHKLTENNTGLRLNVAANYGGRWDMANAAKQLALQVAQGTLNA-VDITEERLAQHM 183
Query: 56 FMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
MA +PD+ IR+ G+ R SNFLLWQ + LY LW
Sbjct: 184 SMADQAEPDLLIRTGGDVRISNFLLWQVAYAELYFTETLW 223
>gi|83942311|ref|ZP_00954772.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
gi|83955547|ref|ZP_00964178.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83840191|gb|EAP79366.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. NAS-14.1]
gi|83846404|gb|EAP84280.1| undecaprenyl diphosphate synthase [Sulfitobacter sp. EE-36]
Length = 247
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ + +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 169 EDVDEETLPRYLDTH------VLPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLW 220
>gi|413962882|ref|ZP_11402109.1| undecaprenyl diphosphate synthase [Burkholderia sp. SJ98]
gi|413928714|gb|EKS68002.1| undecaprenyl diphosphate synthase [Burkholderia sp. SJ98]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTYW 219
>gi|372489316|ref|YP_005028881.1| undecaprenyl diphosphate synthase [Dechlorosoma suillum PS]
gi|359355869|gb|AEV27040.1| undecaprenyl diphosphate synthase [Dechlorosoma suillum PS]
Length = 257
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
D+ + MA AP+PD+ IR+ GE R SNFLLWQ + Y LW E
Sbjct: 173 DLAPFLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSEFYFTDTLWPE 220
>gi|67922228|ref|ZP_00515742.1| Di-trans-poly-cis-decaprenylcistransferase [Crocosphaera watsonii
WH 8501]
gi|67855931|gb|EAM51176.1| Di-trans-poly-cis-decaprenylcistransferase [Crocosphaera watsonii
WH 8501]
Length = 283
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E ++ PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 212 ENFLYTKGIPDPDLLIRTSGEMRISNFLLWQLAYAEIYVTQTLW 255
>gi|107028805|ref|YP_625900.1| UDP diphosphate synthase [Burkholderia cenocepacia AU 1054]
gi|116690036|ref|YP_835659.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|170733371|ref|YP_001765318.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia MC0-3]
gi|206560449|ref|YP_002231213.1| undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
J2315]
gi|254247887|ref|ZP_04941208.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia PC184]
gi|444358425|ref|ZP_21159831.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia BC7]
gi|444369956|ref|ZP_21169656.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia K56-2Valvano]
gi|105897969|gb|ABF80927.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia AU
1054]
gi|116648125|gb|ABK08766.1| Undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
HI2424]
gi|124872663|gb|EAY64379.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia PC184]
gi|169816613|gb|ACA91196.1| undecaprenyl diphosphate synthase [Burkholderia cenocepacia MC0-3]
gi|198036490|emb|CAR52387.1| undecaprenyl pyrophosphate synthetase [Burkholderia cenocepacia
J2315]
gi|443598264|gb|ELT66637.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia K56-2Valvano]
gi|443604108|gb|ELT72069.1| di-trans,poly-cis-decaprenylcistransferase [Burkholderia
cenocepacia BC7]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 34 QALKEKIDEDTIKKLVDVE-------KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
QA K K+ E +++ +VE H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 152 QATK-KLVEQAVREGREVEVTEDAFAPHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYA 210
Query: 87 SLYSPAALW 95
Y W
Sbjct: 211 EFYFTDKYW 219
>gi|376290048|ref|YP_005162295.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
C7 (beta)]
gi|372103444|gb|AEX67041.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
C7 (beta)]
Length = 265
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKI D+I K H++ + PDPD+ IR+SGE R S FLLWQ + ++ W
Sbjct: 190 EKISVDSISK------HLYTSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYW 241
>gi|239815584|ref|YP_002944494.1| undecaprenyl diphosphate synthase [Variovorax paradoxus S110]
gi|239802161|gb|ACS19228.1| undecaprenyl diphosphate synthase [Variovorax paradoxus S110]
Length = 247
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
++++ M +A PDPD+ IR+ GE R SNFLLWQ++ L+ LW E
Sbjct: 159 ANLDRAMALAHVPDPDLLIRTGGEQRLSNFLLWQSAYAELFFSDKLWPE 207
>gi|374853143|dbj|BAL56059.1| undecaprenyl diphosphate synthase [uncultured prokaryote]
Length = 247
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++++ A PDPD+ IR+SGE R SNFL+WQ + Y+ W
Sbjct: 175 QYLYTAGLPDPDLIIRTSGELRVSNFLIWQAAYAEYYATPVYW 217
>gi|376242525|ref|YP_005133377.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
CDCE 8392]
gi|376292946|ref|YP_005164620.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC02]
gi|372105767|gb|AEX71829.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
CDCE 8392]
gi|372110269|gb|AEX76329.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC02]
Length = 265
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKI D+I K H++ + PDPD+ IR+SGE R S FLLWQ + ++ W
Sbjct: 190 EKISVDSISK------HLYTSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYW 241
>gi|257876616|ref|ZP_05656269.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC20]
gi|257810782|gb|EEV39602.1| undecaprenyl pyrophosphate synthetase [Enterococcus casseliflavus
EC20]
Length = 266
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 30 LDGSQALKEKI--DEDTIKKLVD--VEKHMFMAVAP----DPDITIRSSGETRPSNFLLW 81
L QAL E++ E+ + KL + + H+ P DP++ IR+SGE R SNFLLW
Sbjct: 161 LTAVQALYEELAASEEALPKLTEDMLATHLMTGFLPNALRDPELVIRTSGEERISNFLLW 220
Query: 82 QTSNCSLYSPAALW 95
Q + L+ ALW
Sbjct: 221 QIAYSELFFTKALW 234
>gi|343790878|ref|NP_001230493.1| dehydrodolichyl diphosphate synthase isoform 3 [Homo sapiens]
gi|221041656|dbj|BAH12505.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ I E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVQATKNYNNDISESLL------DKCLYTNRSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+ L LW
Sbjct: 179 SDFLLWQTSHSCLVFQPVLW 198
>gi|332808106|ref|XP_001143548.2| PREDICTED: dehydrodolichyl diphosphate synthase isoform 3 [Pan
troglodytes]
Length = 299
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ I E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVQATKNYNNDISESLL------DKCLYTNRSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+ L LW
Sbjct: 179 SDFLLWQTSHSCLVFQPVLW 198
>gi|150016076|ref|YP_001308330.1| undecaprenyl diphosphate synthase [Clostridium beijerinckii NCIMB
8052]
gi|149902541|gb|ABR33374.1| undecaprenyl diphosphate synthase [Clostridium beijerinckii NCIMB
8052]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
KL S K++E+ I + + VEK+++ PDPD+ IR SGE R SNFLLWQ +
Sbjct: 161 KLINSDIKNGKLNEEDINEAL-VEKYLYTKGIPDPDLIIRPSGEQRLSNFLLWQCAYSEF 219
Query: 89 YSPAALWLEEKKK 101
+ W + K+K
Sbjct: 220 WYSDINWPDFKEK 232
>gi|300311497|ref|YP_003775589.1| undecaprenyl pyrophosphate synthetase [Herbaspirillum seropedicae
SmR1]
gi|300074282|gb|ADJ63681.1| undecaprenyl pyrophosphate synthetase protein [Herbaspirillum
seropedicae SmR1]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 175 YLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTETFW 216
>gi|186476092|ref|YP_001857562.1| undecaprenyl diphosphate synthase [Burkholderia phymatum STM815]
gi|184192551|gb|ACC70516.1| undecaprenyl diphosphate synthase [Burkholderia phymatum STM815]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTYW 219
>gi|145220335|ref|YP_001131044.1| undecaprenyl pyrophosphate synthetase [Chlorobium phaeovibrioides
DSM 265]
gi|145206499|gb|ABP37542.1| Undecaprenyl pyrophosphate synthetase [Chlorobium phaeovibrioides
DSM 265]
Length = 281
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 21 DVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLL 80
D+ + C + +A +I D + + + +E H+ A PDP++ IR+SGE R SNF++
Sbjct: 172 DIVQACRTVAEAVEA--GRITADEVNEQL-IESHLSTAGIPDPELIIRTSGEFRISNFMI 228
Query: 81 WQTSNCSLYSPAALW 95
WQ++ +Y W
Sbjct: 229 WQSAYSEIYFTNTYW 243
>gi|38233525|ref|NP_939292.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
NCTC 13129]
gi|375290564|ref|YP_005125104.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
241]
gi|376245398|ref|YP_005135637.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC01]
gi|376248211|ref|YP_005140155.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC04]
gi|376251001|ref|YP_005137882.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC03]
gi|376256820|ref|YP_005144711.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
VA01]
gi|376284429|ref|YP_005157639.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
31A]
gi|42559925|sp|P60480.1|ISPT1_CORDI RecName: Full=Isoprenyl transferase 1
gi|38199785|emb|CAE49448.1| Putative undecaprenyl pyrophosphate synthetase [Corynebacterium
diphtheriae]
gi|371577944|gb|AEX41612.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
31A]
gi|371580235|gb|AEX43902.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
241]
gi|372108028|gb|AEX74089.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC01]
gi|372112505|gb|AEX78564.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC03]
gi|372114779|gb|AEX80837.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
HC04]
gi|372119337|gb|AEX83071.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
VA01]
Length = 265
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKI D+I K H++ + PDPD+ IR+SGE R S FLLWQ + ++ W
Sbjct: 190 EKISVDSISK------HLYTSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYW 241
>gi|308176542|ref|YP_003915948.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
gi|307744005|emb|CBT74977.1| di-trans,poly-cis-decaprenylcistransferase [Arthrobacter
arilaitensis Re117]
Length = 253
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+E ++ PDPD+ IR+SGE R S FL WQ++ Y ALW
Sbjct: 184 DIESALYTKGQPDPDLVIRTSGEQRLSGFLTWQSAYSEFYFCEALW 229
>gi|297282609|ref|XP_002802297.1| PREDICTED: dehydrodolichyl diphosphate synthase-like [Macaca
mulatta]
gi|397476179|ref|XP_003809487.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Pan
paniscus]
gi|402853515|ref|XP_003891438.1| PREDICTED: dehydrodolichyl diphosphate synthase [Papio anubis]
gi|426328488|ref|XP_004025284.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Gorilla
gorilla gorilla]
gi|441671487|ref|XP_004092274.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Nomascus
leucogenys]
Length = 299
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ I E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVQATKNYNNDISESLL------DKCLYTNRSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+ L LW
Sbjct: 179 SDFLLWQTSHSCLVFQPVLW 198
>gi|340758504|ref|ZP_08695090.1| undecaprenyl pyrophosphate synthase [Fusobacterium varium ATCC
27725]
gi|251836715|gb|EES65249.1| undecaprenyl pyrophosphate synthase [Fusobacterium varium ATCC
27725]
Length = 230
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D K+++ + PDP++ IR+SGE R SNFLLWQ + +Y ALW
Sbjct: 158 DFSKYLYNDI-PDPELLIRTSGEFRISNFLLWQIAYSEIYITKALW 202
>gi|221046358|dbj|BAH14856.1| unnamed protein product [Homo sapiens]
Length = 299
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ I E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVQATKNYNNDISESLL------DKCLYTNRSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+ L LW
Sbjct: 179 SDFLLWQTSHSCLVFQPVLW 198
>gi|254464147|ref|ZP_05077558.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
Y4I]
gi|206685055|gb|EDZ45537.1| undecaprenyl pyrophosphate synthetase 1 [Rhodobacterales bacterium
Y4I]
Length = 252
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
++ E +LD E +DE+T+ + +D V PDPD+ IR+SGE R SNFLLW
Sbjct: 163 ARDVAEGRLD-----PEDVDEETLPRYLDTH------VLPDPDLVIRTSGEARISNFLLW 211
Query: 82 QTSNCSLYSPAALW 95
Q++ LW
Sbjct: 212 QSAYAEYEFIDTLW 225
>gi|167586859|ref|ZP_02379247.1| undecaprenyl diphosphate synthase [Burkholderia ubonensis Bu]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 178 HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDKFW 219
>gi|320155596|ref|YP_004187975.1| undecaprenyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O]
gi|319930908|gb|ADV85772.1| undecaprenyl pyrophosphate synthetase [Vibrio vulnificus MO6-24/O]
Length = 251
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I ED D+ KH+ M+ P+ D+ IR+SGE R SNF+LWQ + +Y W
Sbjct: 164 EGITED------DIAKHLTMSDLPEVDLLIRTSGECRISNFMLWQMAYAEMYFTPVFW 215
>gi|260913175|ref|ZP_05919657.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella dagmatis
ATCC 43325]
gi|260632762|gb|EEX50931.1| di-trans,poly-cis-decaprenylcistransferase [Pasteurella dagmatis
ATCC 43325]
Length = 239
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 14 SLILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDV-----EKHMFMAVAPDPDITIR 68
+L L + C D + ++ L E++ ++ I + D+ ++H+ P D+ IR
Sbjct: 128 ALTLNIAANYGGCWDIVQAAKQLAEQVKDNQIA-VSDITPELFQQHLVTKSQPQVDLLIR 186
Query: 69 SSGETRPSNFLLWQTSNCSLYSPAALW 95
+SGE R SNFLLWQ + LY LW
Sbjct: 187 TSGEQRISNFLLWQLAYAELYFTDVLW 213
>gi|254252063|ref|ZP_04945381.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
gi|124894672|gb|EAY68552.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
Length = 260
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 178 HLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYAEFYFTDKYW 219
>gi|328954576|ref|YP_004371910.1| UDP pyrophosphate synthase [Desulfobacca acetoxidans DSM 11109]
gi|328454900|gb|AEB10729.1| Undecaprenyl pyrophosphate synthase [Desulfobacca acetoxidans DSM
11109]
Length = 256
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ ++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 175 RSLYTGDMPDPDLLIRTSGEYRISNFLLWQLAYTELYFTETLW 217
>gi|375292778|ref|YP_005127317.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
INCA 402]
gi|376253997|ref|YP_005142456.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
PW8]
gi|376287406|ref|YP_005159972.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
BH8]
gi|419860507|ref|ZP_14383148.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
gi|371582449|gb|AEX46115.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
INCA 402]
gi|371584740|gb|AEX48405.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
BH8]
gi|372117081|gb|AEX69551.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
PW8]
gi|387982901|gb|EIK56400.1| undecaprenyl pyrophosphate synthetase [Corynebacterium diphtheriae
bv. intermedius str. NCTC 5011]
Length = 265
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
EKI D+I K H++ + PDPD+ IR+SGE R S FLLWQ + ++ W
Sbjct: 190 EKISVDSISK------HLYTSGQPDPDLVIRTSGEQRLSGFLLWQAAYSEIWFTDTYW 241
>gi|319793979|ref|YP_004155619.1| undecaprenyl diphosphate synthase [Variovorax paradoxus EPS]
gi|315596442|gb|ADU37508.1| undecaprenyl diphosphate synthase [Variovorax paradoxus EPS]
Length = 239
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
+ D +QA + ++ +++++ M +A PDPD+ IR+ GE R SNFLLWQ++
Sbjct: 138 GRWDIAQAAAKLAEQGLPMTEMNMDRAMALAHVPDPDLFIRTGGEQRLSNFLLWQSAYAE 197
Query: 88 LYSPAALWLE 97
L+ LW E
Sbjct: 198 LFFSDKLWPE 207
>gi|296207141|ref|XP_002750513.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2
[Callithrix jacchus]
Length = 299
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ I E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVQATKNYNNDISESLL------DKCLYTNRSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+ L LW
Sbjct: 179 SDFLLWQTSHSCLVFQPVLW 198
>gi|284989528|ref|YP_003408082.1| UDP diphosphate synthase [Geodermatophilus obscurus DSM 43160]
gi|284062773|gb|ADB73711.1| undecaprenyl diphosphate synthase [Geodermatophilus obscurus DSM
43160]
Length = 259
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 43 DTIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D + ++DVE +H++ PDPD+ IR+SGE R S FLLWQT++ + W
Sbjct: 180 DELVGVLDVEHIAEHLYTRGQPDPDLVIRTSGEQRLSGFLLWQTAHSEFHFTDVYW 235
>gi|163782041|ref|ZP_02177040.1| hypothetical protein HG1285_17949 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882573|gb|EDP76078.1| hypothetical protein HG1285_17949 [Hydrogenivirga sp. 128-5-R1-1]
Length = 207
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IDEDT +D + PDPD+ IR++GE R SNFLLW + LY W
Sbjct: 130 IDEDTFSHFLD------LGDIPDPDLLIRTAGERRISNFLLWNLAYTELYFTEVCW 179
>gi|115352099|ref|YP_773938.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria AMMD]
gi|171318102|ref|ZP_02907271.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MEX-5]
gi|172060963|ref|YP_001808615.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MC40-6]
gi|115282087|gb|ABI87604.1| Undecaprenyl pyrophosphate synthetase [Burkholderia ambifaria AMMD]
gi|171096726|gb|EDT41611.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MEX-5]
gi|171993480|gb|ACB64399.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria MC40-6]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
QA++E + D + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y
Sbjct: 160 QAVREGREVDVTEDAF--APHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYAEFYFTDK 217
Query: 94 LW 95
W
Sbjct: 218 YW 219
>gi|443323664|ref|ZP_21052668.1| undecaprenyl diphosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786646|gb|ELR96375.1| undecaprenyl diphosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 248
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E H++ A PD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 180 ESHLYTAGLNHPDLLIRTSGEMRISNFLLWQMAYAEIYVTETLW 223
>gi|239917049|ref|YP_002956607.1| UDP pyrophosphate synthetase [Micrococcus luteus NCTC 2665]
gi|281414488|ref|ZP_06246230.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
gi|239838256|gb|ACS30053.1| Undecaprenyl pyrophosphate synthetase [Micrococcus luteus NCTC
2665]
Length = 257
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V+E D+ + E + T++++ D ++ PDPD+ IR+SGE R S FLLW
Sbjct: 163 VRELLRDEHALGHSAAEVAESVTVEQIAD---RLYTRGQPDPDLVIRTSGEQRLSGFLLW 219
Query: 82 QTSNCSLYSPAALW 95
Q++ Y A+W
Sbjct: 220 QSAYSEFYFCEAMW 233
>gi|390571408|ref|ZP_10251651.1| undecaprenyl diphosphate synthase [Burkholderia terrae BS001]
gi|420254932|ref|ZP_14757898.1| undecaprenyl diphosphate synthase [Burkholderia sp. BT03]
gi|389936645|gb|EIM98530.1| undecaprenyl diphosphate synthase [Burkholderia terrae BS001]
gi|398047269|gb|EJL39820.1| undecaprenyl diphosphate synthase [Burkholderia sp. BT03]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y W
Sbjct: 177 EHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTEFYFTDTYW 219
>gi|416389587|ref|ZP_11685383.1| Undecaprenyl pyrophosphate synthetase [Crocosphaera watsonii WH
0003]
gi|357264212|gb|EHJ13130.1| Undecaprenyl pyrophosphate synthetase [Crocosphaera watsonii WH
0003]
Length = 251
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E ++ PDPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 180 ENFLYTKGIPDPDLLIRTSGEMRISNFLLWQLAYAEIYVTQTLW 223
>gi|170699877|ref|ZP_02890907.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria IOP40-10]
gi|170135199|gb|EDT03497.1| undecaprenyl diphosphate synthase [Burkholderia ambifaria IOP40-10]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
QA++E + D + H+ MA AP+PD+ IR+ GE R SNFLLWQ + Y
Sbjct: 160 QAVREGREVDVTEDAF--APHLAMAYAPEPDLFIRTGGEQRVSNFLLWQLAYAEFYFTDK 217
Query: 94 LW 95
W
Sbjct: 218 YW 219
>gi|121606083|ref|YP_983412.1| undecaprenyl diphosphate synthase [Polaromonas naphthalenivorans
CJ2]
gi|120595052|gb|ABM38491.1| Undecaprenyl pyrophosphate synthetase [Polaromonas
naphthalenivorans CJ2]
Length = 250
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 8 QPLKINSLILPVPDVQEYCE--DKLDGSQALKEKIDEDTIKKL--VDVEKHMFMAVAPDP 63
Q L N+ L + Y D + QA + ++ + V + + M APDP
Sbjct: 122 QALTANNSKLTLTIAANYGGRWDMMQAVQAWQAANPAQSVADMNEVALRPYFSMGYAPDP 181
Query: 64 DITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ IR+ GE+R SNF+LWQ + L+ LW
Sbjct: 182 DLLIRTGGESRISNFMLWQVAYTELFFTDTLW 213
>gi|406933126|gb|EKD67873.1| Undecaprenyl diphosphate synthase [uncultured bacterium]
Length = 239
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+E+H++ DPD+ IR+ GE R SNFL+WQ S LY W
Sbjct: 161 IEQHLYTRGQSDPDLMIRTGGEMRVSNFLIWQLSYSELYFTDTYW 205
>gi|357043269|ref|ZP_09104964.1| undecaprenyl pyrophosphate synthase [Prevotella histicola F0411]
gi|355368443|gb|EHG15860.1| undecaprenyl pyrophosphate synthase [Prevotella histicola F0411]
Length = 249
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 26 CEDKLDGSQALK-EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
E +LD S ++ E I ED I + H+ PDPD+ IR+ GE R SN+LLWQ +
Sbjct: 151 AEHQLDSSSFIQPEMITEDVISR------HLQTNFMPDPDLLIRTGGELRISNYLLWQIA 204
Query: 85 NCSLYSPAALW 95
LY W
Sbjct: 205 YSELYFCDTYW 215
>gi|325847017|ref|ZP_08169843.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|325480989|gb|EGC84034.1| di-trans,poly-cis-decaprenylcistransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 234
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
EKIDED D+ +++ PDPD+ IR+ G+ R SNFL++Q + Y LW +
Sbjct: 154 EKIDED------DISNYLYTKNMPDPDLLIRTGGDLRISNFLIYQMAYTEYYFTDVLWPD 207
Query: 98 EKKK 101
KK
Sbjct: 208 FSKK 211
>gi|293605061|ref|ZP_06687454.1| undecaprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
gi|292816563|gb|EFF75651.1| undecaprenyl diphosphate synthase [Achromobacter piechaudii ATCC
43553]
Length = 254
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E++DE+ + + H+ M+ AP+PD+ IR+ GE R SNFL+WQ + Y W
Sbjct: 168 ERVDEERLAR------HLSMSWAPEPDLFIRTGGEQRISNFLIWQMAYAEFYFTDRYW 219
>gi|154484747|ref|ZP_02027195.1| hypothetical protein EUBVEN_02464 [Eubacterium ventriosum ATCC
27560]
gi|149734595|gb|EDM50512.1| di-trans,poly-cis-decaprenylcistransferase [Eubacterium ventriosum
ATCC 27560]
Length = 245
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I EDT+ +D A PDPD+ IR+SGE R SN+LLWQ + Y LW
Sbjct: 167 ITEDTVNSYLDT------AGIPDPDLLIRTSGEIRLSNYLLWQLAYTEFYFTDVLW 216
>gi|410479660|ref|YP_006767297.1| undecaprenyl diphosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|406774912|gb|AFS54337.1| undecaprenyl diphosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 266
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ ED KE++ D I + V +++ ++ P PD+ IR+SGE R SNF
Sbjct: 163 VRAVQRLAED------VRKERLAPDQISETV-FSQYLETSILPPPDLLIRTSGEVRISNF 215
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + +Y LW
Sbjct: 216 LLWQLAYTEMYFTPTLW 232
>gi|403287240|ref|XP_003934859.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Saimiri
boliviensis boliviensis]
Length = 299
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ I E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVQATKNYNNDISESLL------DKCLYTNRSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+ L LW
Sbjct: 179 SDFLLWQTSHSCLVFQPVLW 198
>gi|289578397|ref|YP_003477024.1| UDP diphosphate synthase [Thermoanaerobacter italicus Ab9]
gi|297544673|ref|YP_003676975.1| undecaprenyl diphosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528110|gb|ADD02462.1| undecaprenyl diphosphate synthase [Thermoanaerobacter italicus Ab9]
gi|296842448|gb|ADH60964.1| undecaprenyl diphosphate synthase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 249
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ C L+ + E I E TI +++ PDPD+ IR+SGE R SNF
Sbjct: 155 VKAVKKICTKVLNKELTI-EGITEQTI------SDNLYTKNQPDPDLIIRTSGEKRLSNF 207
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ + LW + KK
Sbjct: 208 LLWQSAYSEFWFTEVLWPDFKK 229
>gi|239617980|ref|YP_002941302.1| UDP diphosphate synthase [Kosmotoga olearia TBF 19.5.1]
gi|239506811|gb|ACR80298.1| undecaprenyl diphosphate synthase [Kosmotoga olearia TBF 19.5.1]
Length = 231
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+++++ P+PD+ IR+SGE R SNFL+W+++ LY LW
Sbjct: 158 ERYLYLPEMPEPDLIIRTSGEKRLSNFLMWESAYSELYFCEKLW 201
>gi|402566202|ref|YP_006615547.1| undecaprenyl diphosphate synthase [Burkholderia cepacia GG4]
gi|402247399|gb|AFQ47853.1| undecaprenyl diphosphate synthase [Burkholderia cepacia GG4]
Length = 260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 34 QALKEKIDEDTIKKLVDVE-------KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
QA K K+ E +++ +VE H+ MA AP+PD+ IR+ GE R SNFLLWQ +
Sbjct: 152 QATK-KLIEQAVREGREVEVTEDAFAPHLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYA 210
Query: 87 SLYSPAALW 95
Y W
Sbjct: 211 EFYFTDKYW 219
>gi|336121678|ref|YP_004576453.1| Undecaprenyl pyrophosphate synthase [Methanothermococcus
okinawensis IH1]
gi|334856199|gb|AEH06675.1| Undecaprenyl pyrophosphate synthase [Methanothermococcus
okinawensis IH1]
Length = 263
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 51 VEKHMFMAVAP--DPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ KH++ A P +PD+ IR+SGE R SNFL+WQ+S LY W
Sbjct: 193 ISKHLYTAHLPYQNPDLIIRTSGEERISNFLIWQSSYSELYFCETYW 239
>gi|319762179|ref|YP_004126116.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans BC]
gi|330826009|ref|YP_004389312.1| UDP diphosphate synthase [Alicycliphilus denitrificans K601]
gi|317116740|gb|ADU99228.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans BC]
gi|329311381|gb|AEB85796.1| undecaprenyl diphosphate synthase [Alicycliphilus denitrificans
K601]
Length = 245
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 55 MFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
M MA PDPD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 166 MGMAHVPDPDLLIRTGGEKRISNFLLWQAAYTELYFSDRLW 206
>gi|217970576|ref|YP_002355810.1| undecaprenyl diphosphate synthase [Thauera sp. MZ1T]
gi|217507903|gb|ACK54914.1| undecaprenyl diphosphate synthase [Thauera sp. MZ1T]
Length = 255
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+ ED ++ + M+ AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 169 ERFTED------EIASELSMSFAPEPDLFIRTGGEKRISNFLLWQLAYTELYFTDVLW 220
>gi|424866530|ref|ZP_18290365.1| Di-trans-poly-cis-decaprenylcistransferase [Leptospirillum sp.
Group II 'C75']
gi|124515078|gb|EAY56589.1| Undecaprenyl diphosphate synthase [Leptospirillum rubarum]
gi|387222832|gb|EIJ77234.1| Di-trans-poly-cis-decaprenylcistransferase [Leptospirillum sp.
Group II 'C75']
Length = 264
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ ED KE++ D I + V +++ ++ P PD+ IR+SGE R SNF
Sbjct: 161 VRAVQRLAED------VRKERLAPDQISETV-FSQYLETSILPPPDLLIRTSGEVRISNF 213
Query: 79 LLWQTSNCSLYSPAALW 95
LLWQ + +Y LW
Sbjct: 214 LLWQLAYTEMYFTPTLW 230
>gi|346226474|ref|ZP_08847616.1| undecaprenyl diphosphate synthase [Anaerophaga thermohalophila DSM
12881]
Length = 247
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+ D DG K+D I + +++ A PDP++ IR+SGE R SNF
Sbjct: 147 VEGVKHIANDVRDG------KLDSSQINAEI-FSRYLETADMPDPELLIRTSGELRISNF 199
Query: 79 LLWQTSNCSLYSPAALWLEEKKKRQF 104
LLWQ + LY LW + +K+ F
Sbjct: 200 LLWQIAYSELYFCNVLWPDFRKENFF 225
>gi|394988469|ref|ZP_10381304.1| UDP diphosphate synthase [Sulfuricella denitrificans skB26]
gi|393791848|dbj|GAB70943.1| UDP diphosphate synthase [Sulfuricella denitrificans skB26]
Length = 251
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+E ++ + AP+PD+ IR+ GE R SNF+LWQ + LY LW
Sbjct: 173 DLEPYLSTSYAPEPDLFIRTGGEKRISNFMLWQLAYAELYFTDTLW 218
>gi|422317220|ref|ZP_16398583.1| undecaprenyl pyrophosphate synthase [Fusobacterium periodonticum
D10]
gi|404590062|gb|EKA92566.1| undecaprenyl pyrophosphate synthase [Fusobacterium periodonticum
D10]
Length = 230
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLLIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|344203243|ref|YP_004788386.1| undecaprenyl pyrophosphate synthase [Muricauda ruestringensis DSM
13258]
gi|343955165|gb|AEM70964.1| Undecaprenyl pyrophosphate synthase [Muricauda ruestringensis DSM
13258]
Length = 258
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE I H++ PD D+ IR+SGE R SNFLLWQ + LY W
Sbjct: 177 ENIDETVINT------HLYAHFLPDVDLLIRTSGECRISNFLLWQIAYAELYFIDVFW 228
>gi|254254359|ref|ZP_04947676.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
gi|124899004|gb|EAY70847.1| Di-trans-poly-cis-decaprenylcistransferase [Burkholderia dolosa
AUO158]
Length = 297
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVD----------VEKHMFMAVAPDPDITIRSSGETRPSN 77
+LD A++ I+E VD + ++ A P+PD+ IR+SGE R SN
Sbjct: 196 GRLDLLHAIRTLIEEHVAAGTVDRLPAQLSAESIASRLYTAGQPEPDLVIRTSGEQRLSN 255
Query: 78 FLLWQTSNCSLYSPAALW 95
F+LWQT+ Y W
Sbjct: 256 FMLWQTAFSEFYFSPVCW 273
>gi|20387099|dbj|BAB91250.1| cis-prenyltransferase [Hevea brasiliensis]
Length = 198
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 11/62 (17%)
Query: 22 VQEYCEDK------LDGSQALKEKIDEDT-----IKKLVDVEKHMFMAVAPDPDITIRSS 70
VQ C +K LD +QA +I E+ I KLVD+E+H +M +APDPD+ IR+S
Sbjct: 137 VQSSCLEKWNEIQELDANQAQNGEITEEKQELKHIIKLVDIERHTYMGLAPDPDVLIRTS 196
Query: 71 GE 72
GE
Sbjct: 197 GE 198
>gi|322434731|ref|YP_004216943.1| undecaprenyl diphosphate synthase [Granulicella tundricola
MP5ACTX9]
gi|321162458|gb|ADW68163.1| undecaprenyl diphosphate synthase [Granulicella tundricola
MP5ACTX9]
Length = 301
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 35 ALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
+L +IDE + +++ A PDPD+ IR+SGE R SNFLLWQ + ++ L
Sbjct: 193 SLDSRIDE------AQLSANLYTAHMPDPDLVIRTSGEQRISNFLLWQIAYSEIFVTDRL 246
Query: 95 W 95
W
Sbjct: 247 W 247
>gi|197119125|ref|YP_002139552.1| undecaprenyl pyrophosphate synthase [Geobacter bemidjiensis Bem]
gi|197088485|gb|ACH39756.1| undecaprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 249
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE + +F A PDPD+ IR+SGE R SNFLLWQ + LY W
Sbjct: 162 EAIDEASFTG------SLFTAGIPDPDLLIRTSGEMRISNFLLWQLAYAELYFTEVNW 213
>gi|159896710|ref|YP_001542957.1| undecaprenyl diphosphate synthase [Herpetosiphon aurantiacus DSM
785]
gi|159889749|gb|ABX02829.1| undecaprenyl diphosphate synthase [Herpetosiphon aurantiacus DSM
785]
Length = 244
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ + PDPD+ +R+SGE R SNFL+WQ + Y LW
Sbjct: 167 IAGHLYTSGIPDPDLIVRTSGEQRLSNFLIWQAAYSEYYMTPLLW 211
>gi|408680412|ref|YP_006880239.1| Undecaprenyl pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
gi|328884741|emb|CCA57980.1| Undecaprenyl pyrophosphate synthetase [Streptomyces venezuelae ATCC
10712]
Length = 253
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 45 IKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ ++VDVE +H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 176 LAEIVDVEHISEHLYTRGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVHW 229
>gi|332653364|ref|ZP_08419109.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcaceae
bacterium D16]
gi|332518510|gb|EGJ48113.1| di-trans,poly-cis-decaprenylcistransferase [Ruminococcaceae
bacterium D16]
Length = 248
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+ Y +D L+G K D + + + + ++F PDPD+ IR SGE R SNFLLW
Sbjct: 157 ARAYAQDCLEG------KADPNHLGE-SEFSDYLFSRGVPDPDLVIRPSGELRLSNFLLW 209
Query: 82 QTSNCSLYSPAALW 95
Q++ Y LW
Sbjct: 210 QSAYAEFYFTDVLW 223
>gi|262068168|ref|ZP_06027780.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
periodonticum ATCC 33693]
gi|291378111|gb|EFE85629.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium
periodonticum ATCC 33693]
Length = 230
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLLIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|456886977|gb|EMF98078.1| putative di-trans,poly-cis-decaprenylcistransferase, partial
[Leptospira borgpetersenii str. 200701203]
Length = 155
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 69 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 127
>gi|340752440|ref|ZP_08689239.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. 2_1_31]
gi|229422240|gb|EEO37287.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. 2_1_31]
Length = 230
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLLIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|358467938|ref|ZP_09177597.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp. oral
taxon 370 str. F0437]
gi|357066200|gb|EHI76356.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp. oral
taxon 370 str. F0437]
Length = 230
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLLIRTSGEMRISNFLLWQIAYSELYITDTLW 202
>gi|307210588|gb|EFN87056.1| Dehydrodolichyl diphosphate synthase [Harpegnathos saltator]
Length = 297
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I+ED I ++ +PDPD+ IR+SGE R S+FL+WQ S+ +Y LW
Sbjct: 181 EDINEDLISNC------LYTYNSPDPDLLIRTSGEVRLSDFLMWQISDTCVYFANVLW 232
>gi|291523273|emb|CBK81566.1| undecaprenyl diphosphate synthase [Coprococcus catus GD/7]
Length = 245
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E ++ A PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 177 EHYLDTAGMPDPDLVIRTSGEQRVSNFLLWQMAYSEFYFTPVLW 220
>gi|317498944|ref|ZP_07957227.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 5_1_63FAA]
gi|316893777|gb|EFV15976.1| di-trans,poly-cis-decaprenylcistransferase [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 235
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
+ D L K++I E+ +D ++ PDPD+ IR+SGE R SNF+LWQ +
Sbjct: 146 HMADDLSSGNLSKDEITEEVFNGYLDTKE------LPDPDLMIRTSGEERLSNFMLWQLA 199
Query: 85 NCSLYSPAALWLEEKKK 101
Y LW + KK
Sbjct: 200 YTEFYFTDVLWPDFNKK 216
>gi|387015558|gb|AFJ49898.1| Dehydrodolichyl diphosphate synthase-like [Crotalus adamanteus]
Length = 334
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++K ++ +P PDI IR+SGE R S+F+LWQTS+ L + LW
Sbjct: 188 IDKCLYSCKSPHPDILIRTSGEVRLSDFMLWQTSHSCLVFQSVLW 232
>gi|380022148|ref|XP_003694915.1| PREDICTED: dehydrodolichyl diphosphate synthase-like isoform 3
[Apis florea]
Length = 256
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 27 EDKLDGSQA---LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQT 83
+D ++G Q L E IDE+ V ++ + +PD+ IR+SGE R S+FL+WQ
Sbjct: 128 KDVIEGVQCGDILSEDIDEEL------VSNCLYTNNSKNPDLLIRTSGEVRFSDFLMWQI 181
Query: 84 SNCSLYSPAALW 95
SN +Y LW
Sbjct: 182 SNTCIYFSNVLW 193
>gi|339009413|ref|ZP_08641985.1| undecaprenyl pyrophosphate synthase [Brevibacillus laterosporus LMG
15441]
gi|421872764|ref|ZP_16304381.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacillus
laterosporus GI-9]
gi|338773891|gb|EGP33422.1| undecaprenyl pyrophosphate synthase [Brevibacillus laterosporus LMG
15441]
gi|372458179|emb|CCF13930.1| di-trans,poly-cis-decaprenylcistransferase [Brevibacillus
laterosporus GI-9]
Length = 267
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE+TI H++ P+PD+ IR+SGE R SNF+LWQ + + W
Sbjct: 191 EQIDEETIAS------HLYTQGIPEPDLLIRTSGEIRISNFMLWQLAYTEFWFTDVYW 242
>gi|121604664|ref|YP_981993.1| undecaprenyl diphosphate synthase [Polaromonas naphthalenivorans
CJ2]
gi|120593633|gb|ABM37072.1| Undecaprenyl pyrophosphate synthetase [Polaromonas
naphthalenivorans CJ2]
Length = 240
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
+ D +QA ++ + +++ M M+ PDPD+ IR+ GE R SNFLLWQ +
Sbjct: 138 GRWDIAQAAQKLASRGEAITELSLDRAMAMSHVPDPDLLIRTGGELRISNFLLWQLAYSE 197
Query: 88 LYSPAALWLE 97
LY LW E
Sbjct: 198 LYFSDKLWPE 207
>gi|350525687|ref|YP_002583124.2| Undecaprenyl pyrophosphate synthetase [Thermococcus sp. AM4]
gi|345650506|gb|EEB74989.2| Undecaprenyl pyrophosphate synthetase [Thermococcus sp. AM4]
Length = 267
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 22 VQEYCEDKLDGSQALK-EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLL 80
V++ D L G LK E+IDED IK+ +++ PDPDI IR+ GE R SNFLL
Sbjct: 177 VKDIVNDVLAGR--LKPEEIDEDLIKR------YLYYPNMPDPDIVIRTGGEVRISNFLL 228
Query: 81 WQTSNCSLY 89
+Q + L+
Sbjct: 229 YQIAYSELF 237
>gi|301059180|ref|ZP_07200120.1| di-trans,poly-cis-decaprenylcistransferase [delta proteobacterium
NaphS2]
gi|300446728|gb|EFK10553.1| di-trans,poly-cis-decaprenylcistransferase [delta proteobacterium
NaphS2]
Length = 241
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++ PDPD+ IR+SGE R SNFLLWQ S +Y LW
Sbjct: 172 NLYTKGLPDPDLLIRTSGEYRISNFLLWQISYSEIYITTTLW 213
>gi|410966432|ref|XP_003989737.1| PREDICTED: dehydrodolichyl diphosphate synthase isoform 2 [Felis
catus]
Length = 299
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 16 ILPVPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRP 75
+LP+ D+QE + ++ I E + +K ++ +P PDI IR+SGE R
Sbjct: 126 LLPL-DLQELIAQAVQATKNYNNDISESLL------DKCLYTNHSPHPDILIRTSGEVRL 178
Query: 76 SNFLLWQTSNCSLYSPAALW 95
S+FLLWQTS+ L LW
Sbjct: 179 SDFLLWQTSHSCLVFQPVLW 198
>gi|395217333|ref|ZP_10401586.1| UDP diphosphate synthase [Pontibacter sp. BAB1700]
gi|394455014|gb|EJF09568.1| UDP diphosphate synthase [Pontibacter sp. BAB1700]
Length = 247
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
V +++ A PDP++ IR+SGE R SNFLLWQ + LY LW + +K+ +
Sbjct: 172 VARYLSTAGIPDPELLIRTSGEQRISNFLLWQLAYTELYITELLWPDFRKEHLY 225
>gi|302879000|ref|YP_003847564.1| undecaprenyl diphosphate synthase [Gallionella capsiferriformans
ES-2]
gi|302581789|gb|ADL55800.1| undecaprenyl diphosphate synthase [Gallionella capsiferriformans
ES-2]
Length = 261
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D++ ++ M AP+PD+ IR+ GE R SNF+LWQ + LY LW
Sbjct: 173 DLQPYLSMGDAPEPDLFIRTGGEMRISNFMLWQLAYTELYFTDTLW 218
>gi|125625173|ref|YP_001033656.1| undecaprenyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris MG1363]
gi|389855560|ref|YP_006357804.1| undecaprenyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris NZ9000]
gi|414075146|ref|YP_007000363.1| undecaprenyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris UC509.9]
gi|124493981|emb|CAL98979.1| UPP synthetase [Lactococcus lactis subsp. cremoris MG1363]
gi|300071982|gb|ADJ61382.1| undecaprenyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris NZ9000]
gi|413975066|gb|AFW92530.1| undecaprenyl pyrophosphate synthase [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 244
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 50 DVEKHMFMAVAP----DPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ KH+ AV P DPD+ IR+SGE R SNFL WQ++ LY W
Sbjct: 169 DLSKHLQTAVLPENLRDPDLIIRTSGEQRMSNFLTWQSAYSELYFAQTAW 218
>gi|291558580|emb|CBL37380.1| undecaprenyl diphosphate synthase [butyrate-producing bacterium
SSC/2]
Length = 235
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
+ D L K++I E+ +D ++ PDPD+ IR+SGE R SNF+LWQ +
Sbjct: 146 HMADDLSSGNLSKDEITEEVFNGYLDTKE------LPDPDLMIRTSGEERLSNFMLWQLA 199
Query: 85 NCSLYSPAALWLEEKKK 101
Y LW + KK
Sbjct: 200 YTEFYFTDVLWPDFNKK 216
>gi|410584553|ref|ZP_11321655.1| undecaprenyl diphosphate synthase [Thermaerobacter subterraneus DSM
13965]
gi|410504139|gb|EKP93651.1| undecaprenyl diphosphate synthase [Thermaerobacter subterraneus DSM
13965]
Length = 405
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
+L +A + +ID I + V + H+ A PDPD+ IR SGE R SNFLLWQ + L
Sbjct: 172 RLVAERAARGEIDPAAIDETV-LAAHLQTADLPDPDLLIRPSGEWRISNFLLWQIAYSEL 230
Query: 89 YSPAALW 95
+ W
Sbjct: 231 WFTPVAW 237
>gi|54026792|ref|YP_121034.1| undecaprenyl pyrophosphate synthetase [Nocardia farcinica IFM
10152]
gi|54018300|dbj|BAD59670.1| putative undecaprenyl pyrophosphate synthetase [Nocardia farcinica
IFM 10152]
Length = 262
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 41 DEDTIKKLV--DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEE 98
ED ++ + + +H++ + PDPD+ IR+SGE R S FLLWQ++ ++ W E
Sbjct: 182 GEDLVQSITVNAIGQHLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEIWFTEVYWPEF 241
Query: 99 KK 100
++
Sbjct: 242 RR 243
>gi|372279018|ref|ZP_09515054.1| undecaprenyl diphosphate synthase [Oceanicola sp. S124]
Length = 254
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ K +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 176 ECVDEETLPKYLDT------CVLPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLW 227
>gi|326405216|ref|YP_004285298.1| UDP pyrophosphate synthetase [Acidiphilium multivorum AIU301]
gi|325052078|dbj|BAJ82416.1| undecaprenyl pyrophosphate synthetase [Acidiphilium multivorum
AIU301]
Length = 283
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H+++ PDPD+ IR+SGE R S F+LWQ+ + L+ A W
Sbjct: 215 IRRHLYLGGMPDPDLIIRTSGEIRLSGFMLWQSVHSELHFCDATW 259
>gi|56696547|ref|YP_166904.1| UDP diphosphate synthase [Ruegeria pomeroyi DSS-3]
gi|56678284|gb|AAV94950.1| undecaprenyl diphosphate synthase [Ruegeria pomeroyi DSS-3]
Length = 243
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ + +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 165 EDVDEETLPRYLDTR------VLPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLW 216
>gi|359440429|ref|ZP_09230349.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20429]
gi|392533951|ref|ZP_10281088.1| UDP pyrophosphate synthetase [Pseudoalteromonas arctica A 37-1-2]
gi|358037742|dbj|GAA66598.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20429]
Length = 259
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +HM MA +PD+ IR+ G+ R SNFLLWQ + LY LW
Sbjct: 179 LAQHMSMADQAEPDLLIRTGGDVRISNFLLWQVAYAELYFTETLW 223
>gi|357037656|ref|ZP_09099456.1| Undecaprenyl pyrophosphate synthase [Desulfotomaculum gibsoniae DSM
7213]
gi|355361821|gb|EHG09576.1| Undecaprenyl pyrophosphate synthase [Desulfotomaculum gibsoniae DSM
7213]
Length = 259
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 31 DGSQALKEKIDEDTIK-KLVDVEK---HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNC 86
D +A+ ++ +K VD++ H++ A PDPD+ IR++G+ R SNFLLWQ +
Sbjct: 164 DAVRAIAAAVEMGCLKASQVDIQTITDHLYTAGQPDPDLLIRTAGDCRISNFLLWQLAYS 223
Query: 87 SLYSPAALW 95
++ LW
Sbjct: 224 EIWFTNVLW 232
>gi|329119072|ref|ZP_08247764.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria bacilliformis
ATCC BAA-1200]
gi|327464811|gb|EGF11104.1| di-trans,poly-cis-decaprenylcistransferase [Neisseria bacilliformis
ATCC BAA-1200]
Length = 248
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKK 101
D+ + + AP+PD+ IR+ GE R SNFLLWQ + LY LW + KK
Sbjct: 167 DLNAELMLGDAPEPDLFIRTGGEMRISNFLLWQMAYAELYFTDTLWPDFDKK 218
>gi|325959853|ref|YP_004291319.1| undecaprenyl pyrophosphate synthase [Methanobacterium sp. AL-21]
gi|325331285|gb|ADZ10347.1| Undecaprenyl pyrophosphate synthase [Methanobacterium sp. AL-21]
Length = 255
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
V ++++ A DP++ IR+SGE R S FLLWQ+S LY +LW E +K
Sbjct: 187 VNQNLYTAGLDDPNLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRK 236
>gi|152976189|ref|YP_001375706.1| undecaprenyl pyrophosphate synthase [Bacillus cytotoxicus NVH
391-98]
gi|152024941|gb|ABS22711.1| undecaprenyl diphosphate synthase [Bacillus cytotoxicus NVH 391-98]
Length = 258
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V VQ +D +G + E I+E+ I ++ + PDPD+ IR+SGE R SNF
Sbjct: 164 VSAVQHMMKDSEEG-KVRSEDINEEMISS------YLMTSALPDPDLLIRTSGEVRISNF 216
Query: 79 LLWQTSNCSLYSPAALW 95
+LWQ + L+ W
Sbjct: 217 MLWQIAYTELWFTNVYW 233
>gi|453379256|dbj|GAC85895.1| undecaprenyl pyrophosphate synthase [Gordonia paraffinivorans NBRC
108238]
Length = 260
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V+ +KL +E ID T++ ++ +++ PDPD+ IR+SGE R S F
Sbjct: 163 VDAVRALLAEKLAEGATPEEMIDAVTVEA---IDANLYTKGQPDPDLVIRTSGEQRLSGF 219
Query: 79 LLWQTSNCSLYSPAALWLEEKK 100
LLWQ++ ++ A W E ++
Sbjct: 220 LLWQSAYSEIWFTDAYWPEFRR 241
>gi|386829370|ref|ZP_10116477.1| undecaprenyl diphosphate synthase [Beggiatoa alba B18LD]
gi|386430254|gb|EIJ44082.1| undecaprenyl diphosphate synthase [Beggiatoa alba B18LD]
Length = 251
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ KH+ A P+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 167 LAKHLSFADLPEPDLFIRTGGEQRISNFLLWQLAYTELYFTDTLW 211
>gi|381187267|ref|ZP_09894832.1| undecaprenyl pyrophosphate synthetase [Flavobacterium frigoris PS1]
gi|379650877|gb|EIA09447.1| undecaprenyl pyrophosphate synthetase [Flavobacterium frigoris PS1]
Length = 246
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 175 HLYTQNLPDVDLLIRTSGEHRISNFLLWQIAYAELYFTDVLW 216
>gi|385839444|ref|YP_005877074.1| undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
cremoris A76]
gi|358750672|gb|AEU41651.1| Undecaprenyl pyrophosphate synthetase [Lactococcus lactis subsp.
cremoris A76]
Length = 244
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 50 DVEKHMFMAVAP----DPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ KH+ AV P DPD+ IR+SGE R SNFL WQ++ LY W
Sbjct: 169 DLSKHLETAVLPENLRDPDLIIRTSGEQRMSNFLTWQSAYSELYFAQTAW 218
>gi|148261723|ref|YP_001235850.1| undecaprenyl diphosphate synthase [Acidiphilium cryptum JF-5]
gi|338983340|ref|ZP_08632545.1| Undecaprenyl diphosphate synthase [Acidiphilium sp. PM]
gi|146403404|gb|ABQ31931.1| Undecaprenyl pyrophosphate synthetase [Acidiphilium cryptum JF-5]
gi|338207735|gb|EGO95667.1| Undecaprenyl diphosphate synthase [Acidiphilium sp. PM]
Length = 283
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H+++ PDPD+ IR+SGE R S F+LWQ+ + L+ A W
Sbjct: 215 IRRHLYLGGMPDPDLIIRTSGEIRLSGFMLWQSVHSELHFCDATW 259
>gi|403713288|ref|ZP_10939405.1| undecaprenyl pyrophosphate synthase [Kineosphaera limosa NBRC
100340]
gi|403212374|dbj|GAB94088.1| undecaprenyl pyrophosphate synthase [Kineosphaera limosa NBRC
100340]
Length = 254
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ PDPD+ IR+SGE R FLLWQ+++ Y A W
Sbjct: 186 IAAHLYTRGQPDPDLVIRTSGEQRVGGFLLWQSTHSEFYFCEAYW 230
>gi|85818175|gb|EAQ39335.1| undecaprenyl pyrophosphate synthetase [Dokdonia donghaensis MED134]
Length = 246
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +H++ PD D+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 172 INQHLYTYDIPDVDLLIRTSGEQRVSNFLLWQIAYAEFYFTEVLW 216
>gi|420154989|ref|ZP_14661860.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. MSTE9]
gi|394759831|gb|EJF42494.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. MSTE9]
Length = 241
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E+I ED I + H++ A PDPD+ +R SGE R SNFLLWQ++ LW
Sbjct: 163 LPEQITEDLISQ------HLYTAGQPDPDLVLRPSGEYRISNFLLWQSAYTEYIIMDKLW 216
>gi|404496114|ref|YP_006720220.1| undecaprenyl pyrophosphate synthase [Geobacter metallireducens
GS-15]
gi|418065463|ref|ZP_12702836.1| undecaprenyl diphosphate synthase [Geobacter metallireducens RCH3]
gi|78193723|gb|ABB31490.1| undecaprenyl diphosphate synthase [Geobacter metallireducens GS-15]
gi|373562203|gb|EHP88420.1| undecaprenyl diphosphate synthase [Geobacter metallireducens RCH3]
Length = 246
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IDE T ++F + PDPD IR+SGE R SNFLLWQ + LY W
Sbjct: 164 IDEKTFSS------YLFTSGMPDPDFLIRTSGEMRISNFLLWQLAYTELYFTEVNW 213
>gi|429124557|ref|ZP_19185089.1| undecaprenyl pyrophosphate synthetase [Brachyspira hampsonii 30446]
gi|426279568|gb|EKV56590.1| undecaprenyl pyrophosphate synthetase [Brachyspira hampsonii 30446]
Length = 240
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+ I + +++ PDPD+ IR+SGE R SNFL++Q S LY LW
Sbjct: 164 ENIDENFI------QNYLYTKEIPDPDLLIRTSGEYRLSNFLMYQASYSELYFTDILW 215
>gi|398836101|ref|ZP_10593450.1| undecaprenyl diphosphate synthase [Herbaspirillum sp. YR522]
gi|398213932|gb|EJN00518.1| undecaprenyl diphosphate synthase [Herbaspirillum sp. YR522]
Length = 229
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ MA AP+PD+ IR+ GE R SNFLLWQ + LY W
Sbjct: 152 YLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDTFW 193
>gi|383788469|ref|YP_005473038.1| undecaprenyl pyrophosphate synthetase [Caldisericum exile AZM16c01]
gi|381364106|dbj|BAL80935.1| undecaprenyl pyrophosphate synthetase [Caldisericum exile AZM16c01]
Length = 229
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
++ K+++ PDPD+ IR+SGE R SNFLL+Q + LY LW + K+ F
Sbjct: 158 INFSKYLYTWNLPDPDLLIRTSGEMRLSNFLLFQIAYTELYFTKTLWPDFTKEEFF 213
>gi|297568949|ref|YP_003690293.1| undecaprenyl diphosphate synthase [Desulfurivibrio alkaliphilus
AHT2]
gi|296924864|gb|ADH85674.1| undecaprenyl diphosphate synthase [Desulfurivibrio alkaliphilus
AHT2]
Length = 244
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+I+E T+ +D A PDPD+ IR+ GE R SNFLLWQ S LY LW
Sbjct: 162 QINEQTLAAELDT------AELPDPDLLIRTGGERRLSNFLLWQLSYSELYFTRTLW 212
>gi|167766542|ref|ZP_02438595.1| hypothetical protein CLOSS21_01048 [Clostridium sp. SS2/1]
gi|167711665|gb|EDS22244.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. SS2/1]
Length = 250
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 25 YCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTS 84
+ D L K++I E+ +D ++ PDPD+ IR+SGE R SNF+LWQ +
Sbjct: 161 HMADDLSSGNLSKDEITEEVFNGYLDTKE------LPDPDLMIRTSGEERLSNFMLWQLA 214
Query: 85 NCSLYSPAALWLEEKKK 101
Y LW + KK
Sbjct: 215 YTEFYFTDVLWPDFNKK 231
>gi|94968445|ref|YP_590493.1| UDP pyrophosphate synthetase [Candidatus Koribacter versatilis
Ellin345]
gi|94550495|gb|ABF40419.1| Undecaprenyl pyrophosphate synthetase [Candidatus Koribacter
versatilis Ellin345]
Length = 267
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++HM+ + P+ D+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 186 SIDQHMYTSQLPELDLLIRTSGEMRLSNFLLWQAAYSEIYVTETLW 231
>gi|445063837|ref|ZP_21375983.1| undecaprenyl pyrophosphate synthetase [Brachyspira hampsonii 30599]
gi|444504776|gb|ELV05392.1| undecaprenyl pyrophosphate synthetase [Brachyspira hampsonii 30599]
Length = 240
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+ I + +++ PDPD+ IR+SGE R SNFL++Q S LY LW
Sbjct: 164 ENIDENFI------QNYLYTKEIPDPDLLIRTSGEYRLSNFLMYQASYSELYFTDILW 215
>gi|384917303|ref|ZP_10017431.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum fumariolicum
SolV]
gi|384525336|emb|CCG93304.1| Undecaprenyl pyrophosphate synthase [Methylacidiphilum fumariolicum
SolV]
Length = 264
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ +PDPD IR+SGE R SNFLLW++S Y W
Sbjct: 193 HLSTHFSPDPDFLIRTSGEMRLSNFLLWESSYTEFYFTNTFW 234
>gi|381152280|ref|ZP_09864149.1| undecaprenyl diphosphate synthase [Methylomicrobium album BG8]
gi|380884252|gb|EIC30129.1| undecaprenyl diphosphate synthase [Methylomicrobium album BG8]
Length = 255
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V +H+ A P+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 175 VSRHLSTADLPEPDLFIRTGGEQRVSNFLLWQLAYTELYFTDTLW 219
>gi|406990082|gb|EKE09771.1| undecaprenyl pyrophosphate synthetase [uncultured bacterium]
Length = 239
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 42 EDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
ED +K+ + +H++ A PDPD+ IR+SGE R SN+LLWQ + L W
Sbjct: 162 EDITEKIFN--EHLYTAGIPDPDLLIRTSGEQRISNYLLWQVAYTELVFVDKFW 213
>gi|296115045|ref|ZP_06833687.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter hansenii
ATCC 23769]
gi|295978382|gb|EFG85118.1| undecaprenyl pyrophosphate synthetase [Gluconacetobacter hansenii
ATCC 23769]
Length = 244
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 31 DGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
DG+ A +IDED + A PDPDI +R+SGE+R SNFLLWQ++ L
Sbjct: 160 DGTLA-PGQIDEDVFGGF------LMTADMPDPDIVVRTSGESRLSNFLLWQSAYAELIF 212
Query: 91 PAALW 95
LW
Sbjct: 213 IETLW 217
>gi|428317609|ref|YP_007115491.1| Undecaprenyl pyrophosphate synthetase [Oscillatoria nigro-viridis
PCC 7112]
gi|428241289|gb|AFZ07075.1| Undecaprenyl pyrophosphate synthetase [Oscillatoria nigro-viridis
PCC 7112]
Length = 248
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE V +++++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 172 EEIDE------VLFKRYLYTADVCDPDLLIRTSGEMRLSNFLLWQMAYSEIYITETLW 223
>gi|398803841|ref|ZP_10562855.1| undecaprenyl diphosphate synthase [Polaromonas sp. CF318]
gi|398095705|gb|EJL86040.1| undecaprenyl diphosphate synthase [Polaromonas sp. CF318]
Length = 246
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 49 VDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+ +++ M MA PDPD+ IR+ GE R SNFLLWQ + L+ LW E
Sbjct: 159 LSLDRAMAMAHVPDPDLLIRTGGELRISNFLLWQAAYSELHFSDKLWPE 207
>gi|372222067|ref|ZP_09500488.1| undecaprenyl pyrophosphate synthase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 258
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE+ I H++ PD D+ IR+SGE R SNFLLWQ + LY W
Sbjct: 177 EDIDENLINT------HLYTHNLPDVDLVIRTSGEHRISNFLLWQIAYAELYFIDVFW 228
>gi|445497572|ref|ZP_21464427.1| undecaprenyl pyrophosphate synthase UppS [Janthinobacterium sp.
HH01]
gi|444787567|gb|ELX09115.1| undecaprenyl pyrophosphate synthase UppS [Janthinobacterium sp.
HH01]
Length = 250
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 54 HMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
H+ MA AP+PD+ IR+ GE R SNFLLWQ + L+ W
Sbjct: 175 HLAMAYAPEPDLFIRTGGEQRISNFLLWQLAYTELFFTDTYW 216
>gi|255524237|ref|ZP_05391196.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296185358|ref|ZP_06853768.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
gi|255512062|gb|EET88343.1| undecaprenyl diphosphate synthase [Clostridium carboxidivorans P7]
gi|296050192|gb|EFG89616.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium
carboxidivorans P7]
Length = 257
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
K+ E+ I + V + K+M+ + PDPD+ IR SGE R SNFLLWQ + + W +
Sbjct: 175 HKLSEECIDETV-ISKYMYTSNMPDPDLIIRPSGEQRLSNFLLWQCAYSEFWYSNIKWPD 233
Query: 98 EKKK 101
KK
Sbjct: 234 FGKK 237
>gi|408370189|ref|ZP_11167967.1| undecaprenyl pyrophosphate synthetase [Galbibacter sp. ck-I2-15]
gi|407744267|gb|EKF55836.1| undecaprenyl pyrophosphate synthetase [Galbibacter sp. ck-I2-15]
Length = 245
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ H++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 171 INNHLYTHDLPDVDLLIRTSGECRISNFLLWQIAYAELYFTDTLW 215
>gi|389700010|ref|ZP_10185122.1| undecaprenyl diphosphate synthase [Leptothrix ochracea L12]
gi|388591271|gb|EIM31528.1| undecaprenyl diphosphate synthase [Leptothrix ochracea L12]
Length = 243
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 21 DVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLL 80
DV + C QAL I + + + + + M A APDPD+ IR+ GE R SNFLL
Sbjct: 148 DVVQACR------QALAAGIQPEALDEAM-LSGFMSQAYAPDPDLFIRTGGEVRVSNFLL 200
Query: 81 WQTSNCSLYSPAALW 95
WQ + L LW
Sbjct: 201 WQIAYAELVFSDCLW 215
>gi|347758097|ref|YP_004865659.1| di-trans,poly-cis-decaprenylcistransferase [Micavibrio
aeruginosavorus ARL-13]
gi|347590615|gb|AEP09657.1| di-trans,poly-cis-decaprenylcistransferase [Micavibrio
aeruginosavorus ARL-13]
Length = 239
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 58 AVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
A APDPDI IR+SGE R SNFLLWQ + L+ LW
Sbjct: 172 AGAPDPDILIRTSGERRISNFLLWQCAYSELFYCDTLW 209
>gi|256374863|ref|YP_003098523.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
gi|255919166|gb|ACU34677.1| undecaprenyl diphosphate synthase [Actinosynnema mirum DSM 43827]
Length = 259
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 44 TIKKLVDV------EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
TI++L +V +H++ + PDPD+ IR+SGE R S F+LWQ+++ + A W E
Sbjct: 178 TIEELAEVLDVDHIAEHLYTSGQPDPDLLIRTSGEQRLSGFMLWQSAHSEFWFCEAYWPE 237
Query: 98 EKK 100
++
Sbjct: 238 FRR 240
>gi|318057623|ref|ZP_07976346.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actG]
gi|318080077|ref|ZP_07987409.1| undecaprenyl pyrophosphate synthase [Streptomyces sp. SA3_actF]
Length = 253
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 176 LAEAVDIDLISE------HLYTRGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFW 229
>gi|149202143|ref|ZP_01879116.1| undecaprenyl diphosphate synthase [Roseovarius sp. TM1035]
gi|149144241|gb|EDM32272.1| undecaprenyl diphosphate synthase [Roseovarius sp. TM1035]
Length = 247
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ + +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 169 EDVDEETLPRYLDT------CVLPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLW 220
>gi|423073373|ref|ZP_17062114.1| di-trans,poly-cis-decaprenylcistransferase [Desulfitobacterium
hafniense DP7]
gi|361855824|gb|EHL07777.1| di-trans,poly-cis-decaprenylcistransferase [Desulfitobacterium
hafniense DP7]
Length = 256
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
V++ CE + KE E+ +L+ +H+F + DPD+ IR+SGE R SNFLLW
Sbjct: 162 VRQLCEKVMK-----KELTPEEITGELIS--QHLFTSGLSDPDLLIRTSGELRVSNFLLW 214
Query: 82 QTSNCSLYSPAALW 95
Q + + LW
Sbjct: 215 QIAYTEIIVTECLW 228
>gi|359800349|ref|ZP_09302894.1| undecaprenyl pyrophosphate synthase [Achromobacter arsenitoxydans
SY8]
gi|359361678|gb|EHK63430.1| undecaprenyl pyrophosphate synthase [Achromobacter arsenitoxydans
SY8]
Length = 254
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ KH+ MA AP+PD+ IR+ GE R SNFL+WQ + Y W
Sbjct: 175 LAKHLSMAWAPEPDLFIRTGGEQRISNFLIWQMAYAEFYFTDRYW 219
>gi|333909901|ref|YP_004483634.1| UDP pyrophosphate synthase [Methanotorris igneus Kol 5]
gi|333750490|gb|AEF95569.1| Undecaprenyl pyrophosphate synthase [Methanotorris igneus Kol 5]
Length = 265
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAV--APDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I E+TI KH++ A P+PD+ IR+SGE R SNFL WQ+S LY W
Sbjct: 188 EDITEETI------SKHLYTANLPYPNPDLIIRTSGEERISNFLTWQSSYSELYFCETYW 241
>gi|307214675|gb|EFN89604.1| Dehydrodolichyl diphosphate synthase [Harpegnathos saltator]
Length = 304
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I+ED I ++ +PDPD+ IR+SGE R S+FL+WQ S+ +Y LW
Sbjct: 181 EDINEDLISNC------LYTYNSPDPDLLIRTSGEVRLSDFLMWQISDTCVYFANVLW 232
>gi|227497806|ref|ZP_03927991.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
gi|226832766|gb|EEH65149.1| undecaprenyl pyrophosphate synthetase [Actinomyces urogenitalis DSM
15434]
Length = 261
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ +H++ PDPD+ IR+SGE R S FLLWQ+ + Y W
Sbjct: 192 DITEHLYTKGQPDPDLVIRTSGEQRLSGFLLWQSVHSEYYFCEVYW 237
>gi|13541431|ref|NP_111119.1| undecaprenyl pyrophosphate synthase [Thermoplasma volcanium GSS1]
gi|42560004|sp|Q97B58.1|UPPS_THEVO RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|14324815|dbj|BAB59742.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 258
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 35 ALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAAL 94
A+ KI+ D I + +++ PDPD+ +R+SGE R SNFLLWQ++ LY
Sbjct: 175 AIAGKINVDEIDE-SKFRNYLYDGNLPDPDLILRTSGEERISNFLLWQSAYSELYFSDVY 233
Query: 95 WLEEKK 100
W E K
Sbjct: 234 WPEFSK 239
>gi|404369364|ref|ZP_10974704.1| undecaprenyl pyrophosphate synthase [Fusobacterium ulcerans ATCC
49185]
gi|313690748|gb|EFS27583.1| undecaprenyl pyrophosphate synthase [Fusobacterium ulcerans ATCC
49185]
Length = 230
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D K+++ + PDP++ +R+SGE R SNFLLWQ + +Y ALW
Sbjct: 158 DFSKYLYNNI-PDPELLVRTSGELRISNFLLWQIAYSEIYITDALW 202
>gi|116327677|ref|YP_797397.1| undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116330592|ref|YP_800310.1| undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116120421|gb|ABJ78464.1| Undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116124281|gb|ABJ75552.1| Undecaprenyl pyrophosphate synthase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 241
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 155 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 213
>gi|27365211|ref|NP_760739.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio vulnificus
CMCP6]
gi|37680737|ref|NP_935346.1| UDP pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|42559945|sp|Q7MIG4.1|UPPS_VIBVY RecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase
((2E,6E)-farnesyl-diphosphate specific); AltName:
Full=Ditrans,polycis-undecaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS; AltName: Full=Undecaprenyl pyrophosphate
synthase; Short=UPP synthase
gi|42559973|sp|Q8DBF7.1|UPPS_VIBVU RecName: Full=Ditrans,polycis-undecaprenyl-diphosphate synthase
((2E,6E)-farnesyl-diphosphate specific); AltName:
Full=Ditrans,polycis-undecaprenylcistransferase;
AltName: Full=Undecaprenyl diphosphate synthase;
Short=UDS; AltName: Full=Undecaprenyl pyrophosphate
synthase; Short=UPP synthase
gi|27361358|gb|AAO10266.1| di-trans,poly-cis-decaprenylcistransferase [Vibrio vulnificus
CMCP6]
gi|37199486|dbj|BAC95317.1| undecaprenyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 251
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I ED D+ KH+ M+ P+ D+ IR+SGE R SNF+LWQ + +Y W
Sbjct: 164 EDITED------DIAKHLTMSDLPEVDLLIRTSGECRISNFMLWQMAYAEMYFTPVFW 215
>gi|373499224|ref|ZP_09589715.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. 12_1B]
gi|371959295|gb|EHO76986.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. 12_1B]
Length = 230
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D K+++ + PDP++ +R+SGE R SNFLLWQ + +Y ALW
Sbjct: 158 DFSKYLYNNI-PDPELLVRTSGELRISNFLLWQIAYSEIYITDALW 202
>gi|348170962|ref|ZP_08877856.1| undecaprenyl pyrophosphate synthase [Saccharopolyspora spinosa NRRL
18395]
Length = 258
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 44 TIKKLVDV------EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
TI++L +V +H++ + PDPD+ IR+SGE R S F+LWQ+++ + A W
Sbjct: 177 TIEELAEVLTVDHIAEHLYTSGQPDPDLLIRTSGEQRLSGFMLWQSAHSEFWFTEAYW 234
>gi|315127160|ref|YP_004069163.1| UDP pyrophosphate synthetase [Pseudoalteromonas sp. SM9913]
gi|359437235|ref|ZP_09227305.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20311]
gi|359446678|ref|ZP_09236329.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20439]
gi|315015674|gb|ADT69012.1| undecaprenyl pyrophosphate synthetase [Pseudoalteromonas sp.
SM9913]
gi|358028059|dbj|GAA63554.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20311]
gi|358039484|dbj|GAA72578.1| undecaprenyl diphosphate synthase [Pseudoalteromonas sp. BSi20439]
Length = 259
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +HM MA PD+ IR+ G+ R SNFLLWQ + LY LW
Sbjct: 179 IAQHMSMADQAQPDLLIRTGGDVRISNFLLWQAAYAELYFTNTLW 223
>gi|392554180|ref|ZP_10301317.1| UDP pyrophosphate synthetase [Pseudoalteromonas undina NCIMB 2128]
Length = 259
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ +HM MA PD+ IR+ G+ R SNFLLWQ + LY LW
Sbjct: 179 IAQHMSMADQAQPDLLIRTGGDVRISNFLLWQAAYAELYFTNTLW 223
>gi|334118198|ref|ZP_08492288.1| Undecaprenyl pyrophosphate synthase [Microcoleus vaginatus FGP-2]
gi|333460183|gb|EGK88793.1| Undecaprenyl pyrophosphate synthase [Microcoleus vaginatus FGP-2]
Length = 248
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE V +++++ A DPD+ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 172 EEIDE------VLFKRYLYTADVCDPDLLIRTSGEMRLSNFLLWQMAYSEIYITETLW 223
>gi|302521651|ref|ZP_07273993.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
gi|302430546|gb|EFL02362.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB78]
Length = 256
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 179 LAEAVDIDLISE------HLYTRGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFW 232
>gi|139439764|ref|ZP_01773155.1| Hypothetical protein COLAER_02186 [Collinsella aerofaciens ATCC
25986]
gi|133774914|gb|EBA38734.1| di-trans,poly-cis-decaprenylcistransferase [Collinsella aerofaciens
ATCC 25986]
Length = 228
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V H++ A PDP++ IR+SGE R SN+LLWQ + Y W
Sbjct: 153 VASHLYTAGLPDPELVIRTSGELRLSNYLLWQVAYSEFYVTDTYW 197
>gi|418721123|ref|ZP_13280311.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii str. UI 09149]
gi|418735030|ref|ZP_13291442.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421095926|ref|ZP_15556634.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii str. 200801926]
gi|410361341|gb|EKP12386.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii str. 200801926]
gi|410742602|gb|EKQ91350.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii str. UI 09149]
gi|410749286|gb|EKR02178.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 241
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 155 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 213
>gi|374609220|ref|ZP_09682016.1| undecaprenyl diphosphate synthase [Mycobacterium tusciae JS617]
gi|373552189|gb|EHP78799.1| undecaprenyl diphosphate synthase [Mycobacterium tusciae JS617]
Length = 254
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E + ED I + +++ + PDPD+ IR+SGE R S FLLWQ++ ++ A W
Sbjct: 177 LVEAVTEDGISE------NLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAYW 230
Query: 96 LEEKK 100
E ++
Sbjct: 231 PEFRR 235
>gi|325983650|ref|YP_004296052.1| UDP diphosphate synthase [Nitrosomonas sp. AL212]
gi|325533169|gb|ADZ27890.1| undecaprenyl diphosphate synthase [Nitrosomonas sp. AL212]
Length = 252
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ +++ ++ AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 174 NLAQYLALSYAPEPDLFIRTGGEYRISNFLLWQLAYTELYFTDTLW 219
>gi|110679818|ref|YP_682825.1| UDP diphosphate synthase [Roseobacter denitrificans OCh 114]
gi|109455934|gb|ABG32139.1| undecaprenyl diphosphate synthase [Roseobacter denitrificans OCh
114]
Length = 258
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE+T+ K +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 180 EDVDEETLPKYLDT------YVLPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLW 231
>gi|224825017|ref|ZP_03698123.1| undecaprenyl diphosphate synthase [Pseudogulbenkiania ferrooxidans
2002]
gi|224602688|gb|EEG08865.1| undecaprenyl diphosphate synthase [Pseudogulbenkiania ferrooxidans
2002]
Length = 227
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 57 MAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
MA AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 153 MAYAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDLLW 191
>gi|163747133|ref|ZP_02154489.1| undecaprenyl diphosphate synthase [Oceanibulbus indolifex HEL-45]
gi|161379694|gb|EDQ04107.1| undecaprenyl diphosphate synthase [Oceanibulbus indolifex HEL-45]
Length = 245
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
Q+ KLD + +DE+T+ + +D V PDPD+ IR+SGE R SNFLLW
Sbjct: 156 AQDVASGKLD-----PDSVDEETLPRYLDTH------VLPDPDLVIRTSGEARISNFLLW 204
Query: 82 QTSNCSLYSPAALW 95
Q++ LW
Sbjct: 205 QSAYAEYEFIDTLW 218
>gi|428221913|ref|YP_007106083.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7502]
gi|427995253|gb|AFY73948.1| undecaprenyl diphosphate synthase [Synechococcus sp. PCC 7502]
Length = 247
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE ++H++ + DPD IR+SGE R SNFLLWQ + +Y LW
Sbjct: 171 EQIDEALF------QQHLYTSGEIDPDFLIRTSGEMRLSNFLLWQIAYTEIYFTPTLW 222
>gi|337750014|ref|YP_004644176.1| protein UppS [Paenibacillus mucilaginosus KNP414]
gi|379722863|ref|YP_005314994.1| protein UppS [Paenibacillus mucilaginosus 3016]
gi|336301203|gb|AEI44306.1| UppS [Paenibacillus mucilaginosus KNP414]
gi|378571535|gb|AFC31845.1| UppS [Paenibacillus mucilaginosus 3016]
Length = 255
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 21 DVQEYCEDKLDGSQALK-EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
+Q+ +D LDG LK E+IDE K++ P+PD+ IR+SGE R SNF+
Sbjct: 163 GIQQIAQDALDGK--LKPEEIDE------ARFSKYLLTDPLPEPDLLIRTSGELRISNFM 214
Query: 80 LWQTSNCSLYSPAALWLEEKKKRQF 104
LWQ + L+ W E ++R +
Sbjct: 215 LWQLAYSELWFTELAWPEFTEERFY 239
>gi|421100806|ref|ZP_15561427.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii str. 200901122]
gi|410796204|gb|EKR98342.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira
borgpetersenii str. 200901122]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 153 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 211
>gi|374290167|ref|YP_005037220.1| undecaprenyl diphosphate synthase [Blattabacterium sp.
(Cryptocercus punctulatus) str. Cpu]
gi|358376959|gb|AEU09147.1| undecaprenyl diphosphate synthase [Blattabacterium sp.
(Cryptocercus punctulatus) str. Cpu]
Length = 243
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 61 PDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKKKRQF 104
PD D+ IR+SGE R SNFLLWQ++ LY LW + +KK F
Sbjct: 183 PDVDLIIRTSGEQRISNFLLWQSAYAELYFTNILWPDFRKKDFF 226
>gi|300868262|ref|ZP_07112892.1| undecaprenyl pyrophosphate synthase [Oscillatoria sp. PCC 6506]
gi|300333744|emb|CBN58076.1| undecaprenyl pyrophosphate synthase [Oscillatoria sp. PCC 6506]
Length = 249
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E+IDE K+ +++ A DPD+ IR+SGE R SNF+LWQ + +Y LW
Sbjct: 173 EEIDEALFKR------YLYTADVCDPDLLIRTSGEMRLSNFMLWQIAYAEIYITDTLW 224
>gi|297626870|ref|YP_003688633.1| UDP pyrophosphate synthase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922635|emb|CBL57212.1| Undecaprenyl pyrophosphate synthase
(di-trans,poly-cis-decaprenylcistransferase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 269
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLEEKK 100
+ H++ PDPD+ IR+SGE R S FL WQ+++ LY ALW + +K
Sbjct: 201 IADHLYTKGQPDPDLLIRTSGEQRLSGFLPWQSAHSELYFCEALWPDFRK 250
>gi|295836755|ref|ZP_06823688.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
gi|197697631|gb|EDY44564.1| di-trans,poly-cis-decaprenylcistransferase [Streptomyces sp. SPB74]
Length = 256
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 179 LAEAVDIDLISE------HLYTRGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFW 232
>gi|18977971|ref|NP_579328.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638]
gi|397652092|ref|YP_006492673.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus COM1]
gi|42559842|sp|Q8U0I8.1|UPPS_PYRFU RecName: Full=Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific); AltName:
Full=Undecaprenyl diphosphate synthase; Short=UDS;
AltName: Full=Undecaprenyl pyrophosphate synthase;
Short=UPP synthase
gi|18893747|gb|AAL81723.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus DSM 3638]
gi|393189683|gb|AFN04381.1| undecaprenyl diphosphate synthase [Pyrococcus furiosus COM1]
Length = 264
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V +++ D L+G L E I+E+ ++K ++++ PDPDI IR+ GE R SNF
Sbjct: 171 VDAIKDIVNDVLEGRLKL-EDINEEIVRK------YLYVPNMPDPDIVIRTGGEVRISNF 223
Query: 79 LLWQTSNCSLY 89
LL+Q + L+
Sbjct: 224 LLYQIAYSELF 234
>gi|386725641|ref|YP_006191967.1| protein UppS [Paenibacillus mucilaginosus K02]
gi|384092766|gb|AFH64202.1| protein UppS [Paenibacillus mucilaginosus K02]
Length = 255
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 21 DVQEYCEDKLDGSQALK-EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFL 79
+Q+ +D LDG LK E+IDE K++ P+PD+ IR+SGE R SNF+
Sbjct: 163 GIQQIAQDALDGK--LKPEEIDE------ARFSKYLLTDPLPEPDLLIRTSGELRISNFM 214
Query: 80 LWQTSNCSLYSPAALWLEEKKKRQF 104
LWQ + L+ W E ++R +
Sbjct: 215 LWQLAYSELWFTELAWPEFTEERFY 239
>gi|359685182|ref|ZP_09255183.1| undecaprenyl pyrophosphate synthase [Leptospira santarosai str.
2000030832]
Length = 241
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 155 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 213
>gi|417843090|ref|ZP_12489167.1| undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M21127]
gi|341950324|gb|EGT76913.1| undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M21127]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 11 KINSLILPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKL--VDVEKHMFMAVAPDPDIT 66
K +L L + C D + ++ L EK+ +E + ++ + ++H+ P D+
Sbjct: 125 KNTALTLNIAANYGGCWDIVQATKQLAEKVKNNEMNVDEIDEIAFQRHLVTQDEPPVDLL 184
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNFLLWQ + LY LW
Sbjct: 185 IRTSGEQRISNFLLWQIAYAELYFSDVLW 213
>gi|441518543|ref|ZP_21000260.1| undecaprenyl pyrophosphate synthase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441454563|dbj|GAC58221.1| undecaprenyl pyrophosphate synthase [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 261
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 23 QEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQ 82
Q +KL + +E ID +++ + D +++ + PDPD+ IR+SGE R S FLLWQ
Sbjct: 168 QTLLREKLAKGASPEEMIDAVSVEGISD---NLYTSGQPDPDLVIRTSGEQRLSGFLLWQ 224
Query: 83 TSNCSLYSPAALW 95
++ ++ A W
Sbjct: 225 SAYSEMWFTDAYW 237
>gi|34497655|ref|NP_901870.1| undecaprenyl pyrophosphate synthetase [Chromobacterium violaceum
ATCC 12472]
gi|42559751|sp|Q7NVZ0.1|ISPT_CHRVO RecName: Full=Isoprenyl transferase
gi|34103511|gb|AAQ59873.1| undecaprenyl pyrophosphate synthetase [Chromobacterium violaceum
ATCC 12472]
Length = 251
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V + MA AP+PD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 169 VTDRLGMAWAPEPDLFIRTGGEQRISNFLLWQLAYSELYFTDLLW 213
>gi|422004623|ref|ZP_16351838.1| undecaprenyl pyrophosphate synthase [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256677|gb|EKT86093.1| undecaprenyl pyrophosphate synthase [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 153 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 211
>gi|418751607|ref|ZP_13307891.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira santarosai
str. MOR084]
gi|409968080|gb|EKO35893.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira santarosai
str. MOR084]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 153 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 211
>gi|398333427|ref|ZP_10518132.1| undecaprenyl pyrophosphate synthase [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 241
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 155 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 213
>gi|332157818|ref|YP_004423097.1| hypothetical protein PNA2_0175 [Pyrococcus sp. NA2]
gi|331033281|gb|AEC51093.1| hypothetical protein PNA2_0175 [Pyrococcus sp. NA2]
Length = 264
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
V V++ D ++G + E IDE+ +KK ++++ PDPDI IR+ GE R SNF
Sbjct: 171 VDAVKDIVRDVMEGKIKV-EDIDEELLKK------YLYVPNMPDPDIVIRTGGEVRISNF 223
Query: 79 LLWQTSNCSLY 89
LL+Q + L+
Sbjct: 224 LLYQIAYSELF 234
>gi|417782125|ref|ZP_12429858.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira weilii str.
2006001853]
gi|410777718|gb|EKR62363.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira weilii str.
2006001853]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 153 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 211
>gi|395146547|gb|AFN53700.1| hypothetical protein [Linum usitatissimum]
Length = 290
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
I+E I+K ++ ++ F P PD+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 213 INESLIEKELETKRTKF----PSPDLLIRTSGELRISNFLLWQLAYTELYFAEPLW 264
>gi|113476060|ref|YP_722121.1| undecaprenyl pyrophosphate synthase [Trichodesmium erythraeum
IMS101]
gi|110167108|gb|ABG51648.1| Undecaprenyl pyrophosphate synthetase [Trichodesmium erythraeum
IMS101]
Length = 248
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 29 KLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSL 88
K G+Q K + + I + + EK+++ A PD+ IR+SGE R SNFLLWQ + +
Sbjct: 158 KAIGTQIQKGLLKPEEINEGL-FEKYLYTAGISHPDLLIRTSGEMRISNFLLWQMAYSEI 216
Query: 89 YSPAALW 95
Y LW
Sbjct: 217 YVTQTLW 223
>gi|456862150|gb|EMF80728.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira weilii
serovar Topaz str. LT2116]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 153 KEKVSFEKPLKEKELEKFLYTSALPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 211
>gi|359727257|ref|ZP_09265953.1| undecaprenyl pyrophosphate synthase [Leptospira weilii str.
2006001855]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 153 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 211
>gi|283777899|ref|YP_003368654.1| undecaprenyl diphosphate synthase [Pirellula staleyi DSM 6068]
gi|283436352|gb|ADB14794.1| undecaprenyl diphosphate synthase [Pirellula staleyi DSM 6068]
Length = 251
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 39 KIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
K+D TI + + V ++ A PDPD+ IR++GE R SNFLLWQ S L+ W E
Sbjct: 169 KLDPATIDEAL-VSSKLYTAGMPDPDLLIRTAGEMRISNFLLWQISYAELWVTEKCWPE 226
>gi|29839943|ref|NP_829049.1| undecaprenyl pyrophosphate synthase [Chlamydophila caviae GPIC]
gi|42559795|sp|Q824H0.1|ISPT_CHLCV RecName: Full=Isoprenyl transferase
gi|29834290|gb|AAP04927.1| undecaprenyl diphosphate synthase [Chlamydophila caviae GPIC]
Length = 250
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+++KI D+I + + + ++ + PDPD+ IR+ GE R SNFLLWQ + LY LW
Sbjct: 168 VEQKISSDSISEEL-IRLYLDTSEMPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDILW 226
>gi|407786304|ref|ZP_11133450.1| undecaprenyl diphosphate synthase [Celeribacter baekdonensis B30]
gi|407202036|gb|EKE72032.1| undecaprenyl diphosphate synthase [Celeribacter baekdonensis B30]
Length = 264
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +DE T+ + +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 186 ETVDETTLTRYLDTR------VLPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLW 237
>gi|304320070|ref|YP_003853713.1| hypothetical protein PB2503_02477 [Parvularcula bermudensis
HTCC2503]
gi|303298973|gb|ADM08572.1| hypothetical protein PB2503_02477 [Parvularcula bermudensis
HTCC2503]
Length = 256
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE I +D A APDPD+ IR+SGE R SNFLLWQ + LW
Sbjct: 180 EAIDERVIGDTLDT------ANAPDPDLVIRTSGEQRLSNFLLWQAAYSEFIFMDCLW 231
>gi|410449013|ref|ZP_11303079.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira sp. Fiocruz
LV3954]
gi|418743973|ref|ZP_13300332.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira santarosai
str. CBC379]
gi|421110467|ref|ZP_15570962.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira santarosai
str. JET]
gi|410017133|gb|EKO79199.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira sp. Fiocruz
LV3954]
gi|410795368|gb|EKR93265.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira santarosai
str. CBC379]
gi|410804063|gb|EKS10186.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira santarosai
str. JET]
gi|456875929|gb|EMF91109.1| di-trans,poly-cis-decaprenylcistransferase [Leptospira santarosai
str. ST188]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KEK+ + K ++EK ++ + P D+ IR++GE R SNFLLWQ++ LY LW
Sbjct: 153 KEKVSFEKPLKEKELEKFLYTSTLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLW 211
>gi|424865129|ref|ZP_18289009.1| di-trans,poly-cis-decaprenylcistransferase [SAR86 cluster bacterium
SAR86B]
gi|400759019|gb|EJP73213.1| di-trans,poly-cis-decaprenylcistransferase [SAR86 cluster bacterium
SAR86B]
Length = 250
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 28 DKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCS 87
DK+ E+I E+ D+ + ++ + PDPD+ IR+ GE R SNFLLWQ++
Sbjct: 158 DKVQLGHLNSEQISEE------DISRALYTSNVPDPDLLIRTGGEHRISNFLLWQSAYTE 211
Query: 88 LYSPAALW 95
L+ W
Sbjct: 212 LFLTDIYW 219
>gi|381401866|ref|ZP_09926757.1| undecaprenyl pyrophosphate synthase [Kingella kingae PYKK081]
gi|380833163|gb|EIC13040.1| undecaprenyl pyrophosphate synthase [Kingella kingae PYKK081]
Length = 250
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + + AP+PD+ IR+ GETR SNF+LWQ + Y LW
Sbjct: 168 DLASKLMLGDAPEPDLFIRTGGETRISNFMLWQMAYAEFYFTDVLW 213
>gi|354594329|ref|ZP_09012368.1| undecaprenyl pyrophosphate synthase [Commensalibacter intestini
A911]
gi|353672005|gb|EHD13705.1| undecaprenyl pyrophosphate synthase [Commensalibacter intestini
A911]
Length = 259
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 22 VQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
VQ +D + Q E+I ED ++F PDPD+ +R+SGE+R SNFLLW
Sbjct: 160 VQRIVQD-VQAQQIDPEQITEDLFSN------YLFAPDVPDPDLIVRTSGESRLSNFLLW 212
Query: 82 QTSNCSLYSPAALW 95
Q++ L LW
Sbjct: 213 QSAYAELIFVETLW 226
>gi|342903957|ref|ZP_08725759.1| Undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M21621]
gi|341953966|gb|EGT80460.1| Undecaprenyl pyrophosphate synthase [Haemophilus haemolyticus
M21621]
Length = 239
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 11 KINSLILPVPDVQEYCEDKLDGSQALKEKI--DEDTIKKL--VDVEKHMFMAVAPDPDIT 66
K +L L + C D + ++ L EK+ +E ++ ++ + ++H+ P D+
Sbjct: 125 KNTALTLNIAANYGGCWDIVQSAKQLAEKVKNNEMSVDEIDEIAFQRHLVTQDEPPVDLL 184
Query: 67 IRSSGETRPSNFLLWQTSNCSLYSPAALW 95
IR+SGE R SNFLLWQ + LY LW
Sbjct: 185 IRTSGEQRISNFLLWQIAYAELYFSDVLW 213
>gi|298529657|ref|ZP_07017060.1| undecaprenyl diphosphate synthase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511093|gb|EFI34996.1| undecaprenyl diphosphate synthase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 233
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ ++++ A PDPD+ IR+SGE R SNFLL+Q++ Y LW
Sbjct: 160 EFGQYLYTAGQPDPDLVIRTSGEYRISNFLLYQSAYSEFYFTETLW 205
>gi|283798095|ref|ZP_06347248.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. M62/1]
gi|291074239|gb|EFE11603.1| di-trans,poly-cis-decaprenylcistransferase [Clostridium sp. M62/1]
gi|295091733|emb|CBK77840.1| undecaprenyl diphosphate synthase [Clostridium cf. saccharolyticum
K10]
Length = 240
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+ + EDT+ +D A PDPD+ IR+SGE R SN+LLWQ + +Y LW
Sbjct: 163 DAVTEDTVASYLDT------AGIPDPDLLIRTSGEIRLSNYLLWQLAYSEIYITDCLW 214
>gi|84516073|ref|ZP_01003433.1| undecaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
gi|84509769|gb|EAQ06226.1| undecaprenyl diphosphate synthase [Loktanella vestfoldensis SKA53]
Length = 243
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+D +T+ + +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 167 VDAETLSRFLDTH------VLPDPDLVIRTSGEARISNFLLWQSAYAEYEFVDTLW 216
>gi|375140612|ref|YP_005001261.1| undecaprenyl diphosphate synthase [Mycobacterium rhodesiae NBB3]
gi|359821233|gb|AEV74046.1| undecaprenyl diphosphate synthase [Mycobacterium rhodesiae NBB3]
Length = 258
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 37 KEKIDEDTIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
KE + T +L+D + ++++ + PDPD+ IR+SGE R S FLLWQ++ ++
Sbjct: 170 KELANGKTGDQLIDAVTEEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWF 229
Query: 91 PAALWLEEKK 100
A W E ++
Sbjct: 230 TEAYWPEFRR 239
>gi|226227178|ref|YP_002761284.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
gi|226090369|dbj|BAH38814.1| undecaprenyl pyrophosphate synthetase [Gemmatimonas aurantiaca
T-27]
Length = 258
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++ ++ A PDPD+ IR+SGE R SNFLLWQ + L+ + W
Sbjct: 186 EISARLYTAGCPDPDLLIRTSGEQRLSNFLLWQVAYAELFISSLYW 231
>gi|333376586|ref|ZP_08468359.1| di-trans,poly-cis-decaprenylcistransferase [Kingella kingae ATCC
23330]
gi|332967740|gb|EGK06847.1| di-trans,poly-cis-decaprenylcistransferase [Kingella kingae ATCC
23330]
Length = 250
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 50 DVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
D+ + + AP+PD+ IR+ GETR SNF+LWQ + Y LW
Sbjct: 168 DLASKLMLGDAPEPDLFIRTGGETRISNFMLWQMAYAEFYFTDVLW 213
>gi|33592521|ref|NP_880165.1| undecaprenyl pyrophosphate synthase [Bordetella pertussis Tohama I]
gi|384203825|ref|YP_005589564.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis CS]
gi|408415058|ref|YP_006625765.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis 18323]
gi|42559772|sp|Q7VYC6.1|ISPT_BORPE RecName: Full=Isoprenyl transferase
gi|42559773|sp|Q7WA56.2|ISPT_BORPA RecName: Full=Isoprenyl transferase
gi|42559774|sp|Q7WJ90.2|ISPT_BORBR RecName: Full=Isoprenyl transferase
gi|33572167|emb|CAE41713.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis Tohama
I]
gi|332381939|gb|AEE66786.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis CS]
gi|401777228|emb|CCJ62505.1| undecaprenyl pyrophosphate synthetase [Bordetella pertussis 18323]
Length = 254
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
++IDE + + H+ MA AP+PD+ IR+ GE R SNFL+WQ + Y W
Sbjct: 168 DRIDEARLAE------HLSMAWAPEPDLFIRTGGEQRISNFLVWQLAYAEFYFTEQFW 219
>gi|421482409|ref|ZP_15929991.1| undecaprenyl pyrophosphate synthase [Achromobacter piechaudii HLE]
gi|400199744|gb|EJO32698.1| undecaprenyl pyrophosphate synthase [Achromobacter piechaudii HLE]
Length = 254
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 44 TIKKLVDVE---KHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
T +LVD E KH+ M+ AP+PD+ IR+ GE R SNFL+WQ + Y W
Sbjct: 165 TRPELVDEERLAKHLSMSWAPEPDLFIRTGGEQRISNFLIWQMAYAEFYFTDRYW 219
>gi|363895047|ref|ZP_09322067.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium ACC19a]
gi|361959804|gb|EHL13065.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium ACC19a]
Length = 242
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I++DTIK +++ + PDPD+ IR+SGE R SNF++++ S Y LW
Sbjct: 161 EDINKDTIKS------YLYTSFMPDPDLIIRTSGEQRLSNFMMYEASYSEFYFCDTLW 212
>gi|433634144|ref|YP_007267771.1| Short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium canettii CIPT 140070017]
gi|432165737|emb|CCK63217.1| Short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium canettii CIPT 140070017]
Length = 262
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 37 KEKIDEDTIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYS 90
KE + T ++LVD + ++++ + PDPD+ IR+SGE R S FLLWQ++ ++
Sbjct: 174 KELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWF 233
Query: 91 PAALW 95
A W
Sbjct: 234 TEACW 238
>gi|300087326|ref|YP_003757848.1| undecaprenyl diphosphate synthase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527059|gb|ADJ25527.1| undecaprenyl diphosphate synthase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 236
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 34 QALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAA 93
QALK+K+ DT+ + + + PD D+ IR+ GE R SNFLLWQ++ LY
Sbjct: 150 QALKQKVAADTLDEKT-FSGLLSSSGLPDVDLLIRTGGERRLSNFLLWQSAYAELYFSDT 208
Query: 94 LW 95
LW
Sbjct: 209 LW 210
>gi|363888834|ref|ZP_09316212.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium CM5]
gi|361967455|gb|EHL20277.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium CM5]
Length = 242
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I++DTIK +++ + PDPD+ IR+SGE R SNF++++ S Y LW
Sbjct: 161 EDINKDTIKS------YLYTSFMPDPDLIIRTSGEQRLSNFMMYEASYSEFYFCDTLW 212
>gi|363891688|ref|ZP_09318866.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium CM2]
gi|402837587|ref|ZP_10886106.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium OBRC8]
gi|361965231|gb|EHL18222.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium CM2]
gi|402274880|gb|EJU24050.1| di-trans,poly-cis-decaprenylcistransferase [Eubacteriaceae
bacterium OBRC8]
Length = 242
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E I++DTIK +++ + PDPD+ IR+SGE R SNF++++ S Y LW
Sbjct: 161 EDINKDTIKS------YLYTSFMPDPDLIIRTSGEQRLSNFMMYEASYSEFYFCDTLW 212
>gi|334139048|ref|ZP_08512447.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. HGF7]
gi|333603226|gb|EGL14645.1| di-trans,poly-cis-decaprenylcistransferase [Paenibacillus sp. HGF7]
Length = 256
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 19 VPDVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNF 78
+ VQ+ D +G + E++ E+T +M + PDPD+ IR+SGE R SNF
Sbjct: 162 LAGVQDVLRDVQEG-KLRPEELSEETFSS------YMLTSGLPDPDLLIRTSGELRLSNF 214
Query: 79 LLWQTSNCSLYSPAALWLE 97
LLWQ + L+ A W E
Sbjct: 215 LLWQLAYSELWFTEAYWPE 233
>gi|300854492|ref|YP_003779476.1| undecaprenyl pyrophosphate synthetase [Clostridium ljungdahlii DSM
13528]
gi|300434607|gb|ADK14374.1| undecaprenyl pyrophosphate synthetase [Clostridium ljungdahlii DSM
13528]
Length = 255
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
+KI+E+ I + V K+++ PDPDI IR SGE R SNFLLWQ + + W +
Sbjct: 173 KKINEEDINEET-VSKYLYTKGMPDPDIIIRPSGEQRLSNFLLWQCAYSEFWYSDIKWPD 231
Query: 98 EKKKRQF 104
KK+ +
Sbjct: 232 FKKEHLY 238
>gi|374986945|ref|YP_004962440.1| putative undecaprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
gi|297157597|gb|ADI07309.1| putative undecaprenyl diphosphate synthase [Streptomyces
bingchenggensis BCW-1]
Length = 253
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 36 LKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
L E +D D I + H++ PDPD+ IR+SGE R S F+LWQ+++ Y W
Sbjct: 176 LAEVVDIDLISE------HLYTRGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCEVFW 229
>gi|336418710|ref|ZP_08598982.1| hypothetical protein HMPREF0401_01000 [Fusobacterium sp. 11_3_2]
gi|336164387|gb|EGN67294.1| hypothetical protein HMPREF0401_01000 [Fusobacterium sp. 11_3_2]
Length = 230
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSEFYITDTLW 202
>gi|339236353|ref|XP_003379731.1| undecaprenyl diphosphate synthase [Trichinella spiralis]
gi|316977558|gb|EFV60643.1| undecaprenyl diphosphate synthase [Trichinella spiralis]
Length = 273
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 21 DVQEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLL 80
+++ C + +A + ++ED + + + KH+ + +PD+ IR+SGETR S+FLL
Sbjct: 162 ELRRACISIMKTFKANGQPVEEDQLTVEL-ISKHLDSGCSTEPDLLIRTSGETRLSDFLL 220
Query: 81 WQTSNCSLYSPAALW 95
WQ S LY LW
Sbjct: 221 WQLSYSCLYFDPVLW 235
>gi|260424722|ref|ZP_05733060.2| di-trans,poly-cis-decaprenylcistransferase [Dialister invisus DSM
15470]
gi|260402949|gb|EEW96496.1| di-trans,poly-cis-decaprenylcistransferase [Dialister invisus DSM
15470]
Length = 242
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 12/82 (14%)
Query: 15 LILPVPDV-QEYCEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGET 73
L+ V D+ Q+ E +++ + + E+TI H++ + + D D+ IR+ GE+
Sbjct: 142 LVNAVRDISQKVAEGRME-----ADSVTEETITN------HLYPSASSDVDLLIRTGGES 190
Query: 74 RPSNFLLWQTSNCSLYSPAALW 95
R SNFLLWQ S LY LW
Sbjct: 191 RISNFLLWQVSYSELYFTPVLW 212
>gi|423137068|ref|ZP_17124711.1| undecaprenyl pyrophosphate synthase [Fusobacterium nucleatum subsp.
animalis F0419]
gi|371961135|gb|EHO78778.1| undecaprenyl pyrophosphate synthase [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 230
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSEFYITDTLW 202
>gi|336401301|ref|ZP_08582072.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. 21_1A]
gi|336161211|gb|EGN64218.1| undecaprenyl pyrophosphate synthase [Fusobacterium sp. 21_1A]
Length = 230
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSEFYITDTLW 202
>gi|260494282|ref|ZP_05814413.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_33]
gi|260198428|gb|EEW95944.1| di-trans,poly-cis-decaprenylcistransferase [Fusobacterium sp.
3_1_33]
Length = 230
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSEFYITDTLW 202
>gi|340751250|ref|ZP_08688072.1| undecaprenyl pyrophosphate synthase [Fusobacterium mortiferum ATCC
9817]
gi|229421769|gb|EEO36816.1| undecaprenyl pyrophosphate synthase [Fusobacterium mortiferum ATCC
9817]
Length = 228
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I+ED + K+++ + PDP++ IR+SGE R SNFLLWQ + +Y LW
Sbjct: 151 KESINED------EFSKYLYNDI-PDPELLIRTSGELRISNFLLWQIAYSEIYITDTLW 202
>gi|254476800|ref|ZP_05090186.1| undecaprenyl pyrophosphate synthetase 1 [Ruegeria sp. R11]
gi|214031043|gb|EEB71878.1| undecaprenyl pyrophosphate synthetase 1 [Ruegeria sp. R11]
Length = 244
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 40 IDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
+DE+T+ K +D V PDPD+ IR+SGE R SNFLLWQ++ LW
Sbjct: 168 VDEETLPKYLDTH------VLPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLW 217
>gi|406883467|gb|EKD31053.1| hypothetical protein ACD_77C00415G0005 [uncultured bacterium]
Length = 238
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E + A PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 162 ESFLTTAGIPDPDLLIRTSGEQRISNFLLWQAAYSEFYFTDVLW 205
>gi|158320549|ref|YP_001513056.1| undecaprenyl diphosphate synthase [Alkaliphilus oremlandii OhILAs]
gi|158140748|gb|ABW19060.1| undecaprenyl diphosphate synthase [Alkaliphilus oremlandii OhILAs]
Length = 251
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 51 VEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
V ++ A PDPD+ IR+SGE R SNFLLWQ + L+ W
Sbjct: 182 VHSFLYTAATPDPDLLIRTSGELRLSNFLLWQCAYSELWFTDVYW 226
>gi|147906875|ref|NP_001079475.1| uncharacterized protein LOC379162 [Xenopus laevis]
gi|27882611|gb|AAH43759.1| MGC52912 protein [Xenopus laevis]
gi|115528273|gb|AAI24854.1| MGC52912 protein [Xenopus laevis]
Length = 332
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 43 DTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALWLE 97
D + L+D + ++ A +P+PD+ IR+SGE R S+FLLWQTS L + LW E
Sbjct: 182 DVTESLLD--QCLYTAKSPEPDLLIRTSGEVRLSDFLLWQTSYSCLVFQSVLWPE 234
>gi|406979930|gb|EKE01620.1| Undecaprenyl pyrophosphate synthetase [uncultured bacterium]
Length = 233
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 42 EDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E TI KL H + PDPD+ IR+SGE R SNF+LWQ + LY LW
Sbjct: 158 EITIDKL---HAHTCLHDLPDPDLFIRTSGEQRISNFMLWQLAYTELYFTDVLW 208
>gi|340621679|ref|YP_004740131.1| Undecaprenyl diphosphate synthase [Capnocytophaga canimorsus Cc5]
gi|339901945|gb|AEK23024.1| Undecaprenyl diphosphate synthase [Capnocytophaga canimorsus Cc5]
Length = 244
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE V ++++ PD D+ IR+SGE R SNFLLWQ + LY LW
Sbjct: 163 ESIDESL------VNRYLYTFDLPDVDLLIRTSGECRISNFLLWQIAYAELYFTDVLW 214
>gi|323137308|ref|ZP_08072386.1| undecaprenyl diphosphate synthase [Methylocystis sp. ATCC 49242]
gi|322397295|gb|EFX99818.1| undecaprenyl diphosphate synthase [Methylocystis sp. ATCC 49242]
Length = 258
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 26 CEDKLDGSQALKEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSN 85
E +LD EKID D I +D A PDPD+ IR+SGE R SNFLLWQ +
Sbjct: 165 AEGRLD-----PEKIDADAIAARLDT------ADIPDPDLIIRTSGEQRLSNFLLWQAAY 213
Query: 86 CSLYSPAALW 95
LW
Sbjct: 214 AEFVFLPILW 223
>gi|284928892|ref|YP_003421414.1| UDP diphosphate synthase [cyanobacterium UCYN-A]
gi|284809351|gb|ADB95056.1| undecaprenyl diphosphate synthase [cyanobacterium UCYN-A]
Length = 250
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 52 EKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E +++ P PD+ IR+SGE R SNFLLWQ + +Y + LW
Sbjct: 182 ENYLYTKDIPHPDLLIRTSGEMRLSNFLLWQLAYAEIYVTSTLW 225
>gi|237744133|ref|ZP_04574614.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 7_1]
gi|229431362|gb|EEO41574.1| undecaprenyl pyrophosphate synthetase [Fusobacterium sp. 7_1]
Length = 230
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
KE I E+ D K+++ PDPD+ IR+SGE R SNFLLWQ + Y LW
Sbjct: 151 KENITEE------DFSKYLYNDF-PDPDLVIRTSGEMRISNFLLWQIAYSEFYITDTLW 202
>gi|225849934|ref|YP_002730168.1| di-trans, poly-cis-decaprenylcistransferase [Persephonella marina
EX-H1]
gi|225645945|gb|ACO04131.1| di-trans, poly-cis-decaprenylcistransferase [Persephonella marina
EX-H1]
Length = 233
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 37 KEKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
K +IDE+ ++ ++++ P+PD+ IR+SGE R SNF+LW+ + LY LW
Sbjct: 154 KREIDEEEFRE------YLYIPEMPEPDLLIRTSGEKRISNFMLWELAYTELYFTEVLW 206
>gi|167966591|ref|ZP_02548868.1| short-chain (C15) Z-isoprenyl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
Length = 163
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 30 LDGSQAL--KEKIDEDTIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+D +AL KE + T ++LVD + ++++ + PDPD+ IR+SGE R S FLLW
Sbjct: 66 VDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLW 125
Query: 82 QTSNCSLYSPAALW 95
Q++ ++ A W
Sbjct: 126 QSAYSEMWFTEAHW 139
>gi|305665179|ref|YP_003861466.1| undecaprenyl pyrophosphate synthetase [Maribacter sp. HTCC2170]
gi|88709931|gb|EAR02163.1| undecaprenyl pyrophosphate synthetase [Maribacter sp. HTCC2170]
Length = 246
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 38 EKIDEDTIKKLVDVEKHMFMAVAPDPDITIRSSGETRPSNFLLWQTSNCSLYSPAALW 95
E IDE I H++ PD D+ IR+SGE R SNFLLWQ + LY W
Sbjct: 165 ESIDETIINN------HLYTQNLPDVDLLIRTSGEHRISNFLLWQIAYAELYFIDVFW 216
>gi|433641231|ref|YP_007286990.1| Short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium canettii CIPT 140070008]
gi|432157779|emb|CCK55059.1| Short (C15) chain Z-isoprenyl diphosphate synthase (Z-FPP synthase)
(Z-farnesyl diphosphate synthase) (Z-FPP synthetase)
(Z-farnesyl diphosphate synthetase)
(geranyltranstransferase) (farnesyl pyrophosphate
synthetase) [Mycobacterium canettii CIPT 140070008]
Length = 262
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 30 LDGSQAL--KEKIDEDTIKKLVD------VEKHMFMAVAPDPDITIRSSGETRPSNFLLW 81
+D +AL KE + T ++LVD + ++++ + PDPD+ IR+SGE R S FLLW
Sbjct: 165 VDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLW 224
Query: 82 QTSNCSLYSPAALW 95
Q++ ++ A W
Sbjct: 225 QSAYSEMWFTEAHW 238
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,760,608,178
Number of Sequences: 23463169
Number of extensions: 64793330
Number of successful extensions: 124424
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4345
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 120057
Number of HSP's gapped (non-prelim): 4481
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)