Query 039385
Match_columns 126
No_of_seqs 118 out of 1284
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:27:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039385.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039385hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4esy_A CBS domain containing m 99.8 2E-20 6.7E-25 121.4 7.1 114 3-119 43-162 (170)
2 3k6e_A CBS domain protein; str 99.8 7.5E-20 2.6E-24 117.6 5.8 100 3-121 42-144 (156)
3 3hf7_A Uncharacterized CBS-dom 99.8 2.8E-19 9.7E-24 111.3 6.3 100 3-120 29-128 (130)
4 3nqr_A Magnesium and cobalt ef 99.8 5.9E-19 2E-23 109.3 7.6 96 3-118 30-125 (127)
5 3i8n_A Uncharacterized protein 99.8 7.4E-19 2.5E-23 109.2 7.9 97 3-119 33-129 (130)
6 3lfr_A Putative metal ION tran 99.8 2.2E-19 7.6E-24 112.6 5.2 103 3-124 30-132 (136)
7 3jtf_A Magnesium and cobalt ef 99.8 7.7E-19 2.6E-23 109.1 7.3 95 3-120 32-127 (129)
8 3lhh_A CBS domain protein; str 99.8 7.9E-19 2.7E-23 114.1 7.6 99 3-123 69-168 (172)
9 3lv9_A Putative transporter; C 99.8 9.2E-19 3.1E-23 111.0 7.6 96 3-120 50-146 (148)
10 4gqw_A CBS domain-containing p 99.8 3E-18 1E-22 108.4 8.5 116 3-123 32-147 (152)
11 3oco_A Hemolysin-like protein 99.8 8E-19 2.7E-23 112.0 5.6 100 3-123 47-147 (153)
12 2nyc_A Nuclear protein SNF4; b 99.8 3E-18 1E-22 107.6 7.7 107 3-120 36-142 (144)
13 3sl7_A CBS domain-containing p 99.8 6.4E-18 2.2E-22 109.8 9.3 117 3-121 31-158 (180)
14 3kxr_A Magnesium transporter, 99.7 4.2E-18 1.4E-22 113.9 8.2 94 8-125 87-180 (205)
15 3fhm_A Uncharacterized protein 99.7 1.1E-18 3.7E-23 112.6 4.9 102 3-122 52-153 (165)
16 3oi8_A Uncharacterized protein 99.7 4.8E-18 1.6E-22 108.8 7.6 91 3-114 65-155 (156)
17 2uv4_A 5'-AMP-activated protei 99.7 1.1E-18 3.6E-23 111.2 3.8 106 3-119 46-151 (152)
18 3kpb_A Uncharacterized protein 99.7 1.6E-18 5.5E-23 106.2 4.5 95 3-119 26-120 (122)
19 3t4n_C Nuclear protein SNF4; C 99.7 1E-17 3.5E-22 118.0 9.2 107 3-120 215-321 (323)
20 3lqn_A CBS domain protein; csg 99.7 4.3E-18 1.5E-22 107.9 5.9 101 3-122 42-146 (150)
21 2o16_A Acetoin utilization pro 99.7 1.5E-17 5.2E-22 106.8 7.7 102 3-122 30-138 (160)
22 3gby_A Uncharacterized protein 99.7 1.8E-18 6.1E-23 107.2 2.7 98 3-120 30-127 (128)
23 1y5h_A Hypothetical protein RV 99.7 7.2E-18 2.5E-22 104.8 5.2 98 3-119 33-131 (133)
24 2p9m_A Hypothetical protein MJ 99.7 1E-17 3.5E-22 104.7 5.8 99 3-120 33-137 (138)
25 3ocm_A Putative membrane prote 99.7 8.8E-18 3E-22 109.5 5.6 98 3-122 63-160 (173)
26 2ef7_A Hypothetical protein ST 99.7 7.7E-18 2.6E-22 104.7 5.1 100 3-122 29-128 (133)
27 3ctu_A CBS domain protein; str 99.7 9.4E-18 3.2E-22 107.1 5.6 101 3-122 42-145 (156)
28 2oux_A Magnesium transporter; 99.7 7.2E-17 2.5E-21 112.7 9.9 94 8-125 172-265 (286)
29 2rc3_A CBS domain; in SITU pro 99.7 1.2E-17 4.2E-22 104.1 4.8 98 3-120 34-132 (135)
30 1vr9_A CBS domain protein/ACT 99.7 7.7E-17 2.6E-21 108.1 8.8 94 3-120 38-131 (213)
31 1yav_A Hypothetical protein BS 99.7 2E-17 6.9E-22 105.9 5.5 102 3-123 41-146 (159)
32 3ddj_A CBS domain-containing p 99.7 4.8E-17 1.6E-21 113.3 7.7 104 3-123 181-289 (296)
33 1pbj_A Hypothetical protein; s 99.7 5.3E-17 1.8E-21 99.7 6.9 97 3-119 26-122 (125)
34 2pfi_A Chloride channel protei 99.7 9.2E-17 3.1E-21 102.9 8.2 107 3-122 38-150 (164)
35 4fry_A Putative signal-transdu 99.7 2.6E-17 8.8E-22 105.1 5.4 101 3-122 38-138 (157)
36 3fv6_A YQZB protein; CBS domai 99.7 1.5E-17 5E-22 106.7 4.1 101 4-122 42-147 (159)
37 2emq_A Hypothetical conserved 99.7 4.3E-17 1.5E-21 103.9 6.2 101 3-122 38-142 (157)
38 1pvm_A Conserved hypothetical 99.7 1.3E-17 4.5E-22 109.3 3.9 100 3-119 34-133 (184)
39 2yzi_A Hypothetical protein PH 99.7 2.2E-17 7.7E-22 103.2 4.8 99 3-121 32-131 (138)
40 2j9l_A Chloride channel protei 99.7 6E-17 2.1E-21 105.7 6.2 119 3-123 42-169 (185)
41 3k2v_A Putative D-arabinose 5- 99.7 2.5E-17 8.6E-22 104.5 3.2 94 3-115 55-148 (149)
42 1o50_A CBS domain-containing p 99.7 1.1E-16 3.8E-21 102.3 6.2 113 3-121 41-155 (157)
43 2qrd_G Protein C1556.08C; AMPK 99.7 1.9E-16 6.6E-21 112.0 8.0 106 4-120 211-316 (334)
44 2yzq_A Putative uncharacterize 99.7 9.8E-17 3.3E-21 110.8 6.3 115 3-119 151-279 (282)
45 2v8q_E 5'-AMP-activated protei 99.7 1.8E-16 6E-21 112.1 7.6 107 4-121 219-325 (330)
46 2yvy_A MGTE, Mg2+ transporter 99.7 1.4E-16 4.6E-21 110.8 6.6 94 8-125 170-263 (278)
47 2d4z_A Chloride channel protei 99.6 4.9E-16 1.7E-20 106.7 8.4 55 66-121 194-248 (250)
48 2rih_A Conserved protein with 99.6 8.8E-17 3E-21 100.9 3.9 98 3-119 30-128 (141)
49 3l2b_A Probable manganase-depe 99.6 2.6E-16 8.7E-21 107.3 5.7 54 65-118 189-243 (245)
50 3kh5_A Protein MJ1225; AMPK, A 99.6 4.3E-16 1.5E-20 107.3 4.9 97 3-117 173-279 (280)
51 3ddj_A CBS domain-containing p 99.6 2.2E-15 7.5E-20 104.9 8.0 96 4-119 119-214 (296)
52 3org_A CMCLC; transporter, tra 99.6 2E-16 6.9E-21 120.8 2.1 118 4-123 481-629 (632)
53 2zy9_A Mg2+ transporter MGTE; 99.6 2.9E-15 1E-19 111.1 7.3 94 7-124 189-282 (473)
54 3kh5_A Protein MJ1225; AMPK, A 99.6 3.7E-15 1.3E-19 102.6 6.9 112 4-120 30-143 (280)
55 2v8q_E 5'-AMP-activated protei 99.6 1.6E-14 5.4E-19 102.0 8.8 108 3-119 62-177 (330)
56 2yzq_A Putative uncharacterize 99.5 2.4E-14 8.2E-19 98.8 8.7 92 3-118 26-118 (282)
57 3t4n_C Nuclear protein SNF4; C 99.5 5.4E-15 1.9E-19 104.1 5.0 104 4-121 140-250 (323)
58 3usb_A Inosine-5'-monophosphat 99.5 2E-14 6.8E-19 107.5 7.8 94 3-119 138-234 (511)
59 1me8_A Inosine-5'-monophosphat 99.5 3.9E-15 1.3E-19 111.1 0.0 95 3-119 122-221 (503)
60 3pc3_A CG1753, isoform A; CBS, 99.5 2E-14 6.9E-19 107.8 3.7 99 3-121 410-513 (527)
61 4avf_A Inosine-5'-monophosphat 99.4 1.1E-14 3.9E-19 108.3 0.0 92 3-118 113-206 (490)
62 1zfj_A Inosine monophosphate d 99.4 8.1E-13 2.8E-17 98.3 9.6 93 4-119 116-211 (491)
63 2qrd_G Protein C1556.08C; AMPK 99.4 3.1E-13 1.1E-17 95.4 7.0 107 4-119 50-172 (334)
64 4fxs_A Inosine-5'-monophosphat 99.4 1.7E-14 5.7E-19 107.5 0.4 92 3-117 114-207 (496)
65 1vrd_A Inosine-5'-monophosphat 99.4 1.8E-14 6.2E-19 107.3 0.1 95 3-120 120-216 (494)
66 4af0_A Inosine-5'-monophosphat 99.4 2.3E-14 8E-19 106.3 0.0 92 3-117 163-256 (556)
67 3ghd_A A cystathionine beta-sy 99.3 1.6E-11 5.5E-16 68.5 6.6 47 71-118 2-48 (70)
68 3lhh_A CBS domain protein; str 99.3 1.5E-11 5E-16 79.6 7.4 98 21-119 2-103 (172)
69 1jcn_A Inosine monophosphate d 99.3 1.1E-13 3.7E-18 103.6 -3.5 96 3-118 133-232 (514)
70 2cu0_A Inosine-5'-monophosphat 99.3 5E-13 1.7E-17 99.4 0.0 90 3-118 118-207 (486)
71 4esy_A CBS domain containing m 99.2 8E-12 2.7E-16 80.6 4.5 53 65-117 22-74 (170)
72 3fio_A A cystathionine beta-sy 99.2 6.5E-11 2.2E-15 65.5 6.6 49 70-119 1-49 (70)
73 3lv9_A Putative transporter; C 99.1 1.9E-10 6.4E-15 72.4 7.2 55 66-120 28-85 (148)
74 3k6e_A CBS domain protein; str 99.1 1.1E-10 3.8E-15 74.6 6.0 51 69-119 25-75 (156)
75 3l2b_A Probable manganase-depe 99.1 3.1E-10 1.1E-14 77.1 6.8 56 64-119 10-65 (245)
76 3k2v_A Putative D-arabinose 5- 99.1 5.6E-10 1.9E-14 70.3 7.4 54 66-119 33-88 (149)
77 3kpb_A Uncharacterized protein 99.1 2.8E-10 9.5E-15 69.1 5.7 54 66-119 6-59 (122)
78 2d4z_A Chloride channel protei 99.0 7.3E-10 2.5E-14 76.0 7.7 56 65-120 17-74 (250)
79 2rih_A Conserved protein with 99.0 1.1E-09 3.8E-14 68.2 7.2 55 65-119 9-65 (141)
80 3oi8_A Uncharacterized protein 99.0 2E-10 6.8E-15 73.1 3.8 70 48-118 26-98 (156)
81 3ocm_A Putative membrane prote 99.0 2E-09 6.7E-14 69.8 8.5 70 49-119 25-97 (173)
82 2o16_A Acetoin utilization pro 99.0 7.6E-10 2.6E-14 70.6 6.4 55 65-119 9-63 (160)
83 3fhm_A Uncharacterized protein 99.0 1.9E-09 6.4E-14 69.0 8.1 51 70-120 36-86 (165)
84 1pbj_A Hypothetical protein; s 99.0 1.2E-09 4.1E-14 66.5 6.9 53 66-119 6-58 (125)
85 3ctu_A CBS domain protein; str 99.0 9.1E-10 3.1E-14 69.7 6.5 54 66-119 20-75 (156)
86 3lqn_A CBS domain protein; csg 99.0 8.4E-10 2.9E-14 69.4 6.2 50 69-118 25-74 (150)
87 2yzi_A Hypothetical protein PH 99.0 1.2E-09 4.1E-14 67.7 6.8 52 65-116 11-62 (138)
88 3hf7_A Uncharacterized CBS-dom 99.0 1.4E-09 4.6E-14 67.2 6.3 51 69-119 12-63 (130)
89 3kxr_A Magnesium transporter, 99.0 2.1E-09 7.3E-14 71.5 7.5 68 48-116 42-112 (205)
90 2ef7_A Hypothetical protein ST 99.0 2.4E-09 8.2E-14 65.9 7.3 54 65-119 8-61 (133)
91 1yav_A Hypothetical protein BS 99.0 1.2E-09 4.1E-14 69.4 6.0 53 66-118 19-73 (159)
92 2p9m_A Hypothetical protein MJ 99.0 1.5E-09 5.3E-14 67.1 6.3 54 65-118 12-66 (138)
93 2nyc_A Nuclear protein SNF4; b 99.0 1.7E-09 5.8E-14 67.2 6.5 54 66-119 16-69 (144)
94 3fv6_A YQZB protein; CBS domai 99.0 2.7E-09 9.2E-14 67.9 7.5 51 66-117 22-72 (159)
95 3i8n_A Uncharacterized protein 99.0 1E-09 3.5E-14 67.6 5.3 54 66-119 11-67 (130)
96 3gby_A Uncharacterized protein 98.9 1.6E-09 5.4E-14 66.5 5.6 53 65-118 9-61 (128)
97 2pfi_A Chloride channel protei 98.9 2.5E-09 8.5E-14 67.9 6.6 53 66-118 18-72 (164)
98 3nqr_A Magnesium and cobalt ef 98.9 6.4E-10 2.2E-14 68.2 3.7 53 66-118 8-63 (127)
99 2emq_A Hypothetical conserved 98.9 1.7E-09 6E-14 68.3 5.5 53 66-118 16-70 (157)
100 1pvm_A Conserved hypothetical 98.9 3.3E-09 1.1E-13 69.0 6.9 54 65-118 13-66 (184)
101 3jtf_A Magnesium and cobalt ef 98.9 9E-10 3.1E-14 67.8 4.0 53 66-118 10-65 (129)
102 1o50_A CBS domain-containing p 98.9 5.1E-09 1.7E-13 66.4 7.4 53 65-118 20-73 (157)
103 3lfr_A Putative metal ION tran 98.9 9.2E-10 3.2E-14 68.4 3.8 53 66-118 8-63 (136)
104 1y5h_A Hypothetical protein RV 98.9 1.9E-09 6.4E-14 66.4 4.5 50 66-115 13-62 (133)
105 2uv4_A 5'-AMP-activated protei 98.9 5.6E-09 1.9E-13 65.9 6.7 51 69-119 29-79 (152)
106 3oco_A Hemolysin-like protein 98.9 2.7E-09 9.3E-14 67.4 5.2 51 70-120 31-83 (153)
107 4gqw_A CBS domain-containing p 98.8 4.1E-09 1.4E-13 66.0 5.3 51 66-116 10-62 (152)
108 3sl7_A CBS domain-containing p 98.8 3E-09 1E-13 68.5 4.5 50 66-115 9-60 (180)
109 2rc3_A CBS domain; in SITU pro 98.8 6.1E-09 2.1E-13 64.3 5.3 48 69-117 17-64 (135)
110 2j9l_A Chloride channel protei 98.8 1E-08 3.4E-13 66.4 5.6 49 71-119 25-77 (185)
111 2oux_A Magnesium transporter; 98.8 2E-08 6.8E-13 69.9 7.1 63 53-116 130-197 (286)
112 1vr9_A CBS domain protein/ACT 98.8 6.5E-09 2.2E-13 69.4 4.3 53 65-117 17-69 (213)
113 3pc3_A CG1753, isoform A; CBS, 98.7 1.7E-08 5.9E-13 75.7 6.3 57 64-120 387-445 (527)
114 4fry_A Putative signal-transdu 98.7 6.8E-08 2.3E-12 61.0 7.7 50 69-119 21-70 (157)
115 2yvy_A MGTE, Mg2+ transporter 98.7 9E-08 3.1E-12 66.2 8.5 62 54-116 129-195 (278)
116 2zy9_A Mg2+ transporter MGTE; 98.5 2E-07 6.9E-12 69.1 7.1 63 53-116 148-215 (473)
117 3org_A CMCLC; transporter, tra 98.4 6.8E-08 2.3E-12 73.9 0.9 55 65-119 457-514 (632)
118 4fxs_A Inosine-5'-monophosphat 98.3 5.4E-07 1.8E-11 67.2 5.3 49 66-114 94-142 (496)
119 3ghd_A A cystathionine beta-sy 98.3 4.3E-08 1.5E-12 54.4 -1.4 28 3-32 17-44 (70)
120 1zfj_A Inosine monophosphate d 98.2 3.1E-06 1.1E-10 62.9 6.3 50 66-115 95-146 (491)
121 3usb_A Inosine-5'-monophosphat 98.2 2.6E-06 8.9E-11 63.8 5.8 50 66-115 118-169 (511)
122 1vrd_A Inosine-5'-monophosphat 98.1 2.8E-07 9.5E-12 68.6 0.0 50 66-115 100-149 (494)
123 1me8_A Inosine-5'-monophosphat 98.0 7.6E-07 2.6E-11 66.5 0.0 49 67-115 103-154 (503)
124 4avf_A Inosine-5'-monophosphat 97.9 1.6E-06 5.4E-11 64.7 0.1 48 66-114 93-140 (490)
125 3fio_A A cystathionine beta-sy 97.8 1.1E-06 3.7E-11 48.0 -1.6 29 3-33 17-45 (70)
126 4af0_A Inosine-5'-monophosphat 97.8 2.5E-06 8.6E-11 63.8 -0.2 50 66-115 143-195 (556)
127 1jcn_A Inosine monophosphate d 97.7 2.3E-06 7.7E-11 64.1 -1.3 52 65-116 112-166 (514)
128 2cu0_A Inosine-5'-monophosphat 97.4 2.1E-05 7.3E-10 58.5 0.0 49 66-115 98-146 (486)
129 1tif_A IF3-N, translation init 89.3 1.2 4.2E-05 24.7 5.1 28 92-119 13-40 (78)
130 1p0z_A Sensor kinase CITA; tra 73.4 3.2 0.00011 24.7 3.0 18 93-110 104-121 (131)
131 3by8_A Sensor protein DCUS; hi 70.2 2.6 8.7E-05 25.6 2.1 28 93-120 109-136 (142)
132 3tjo_A Serine protease HTRA1; 66.6 3.8 0.00013 27.0 2.5 19 92-110 188-206 (231)
133 2w5e_A Putative serine proteas 65.2 4.5 0.00015 25.4 2.5 23 88-110 122-144 (163)
134 3fan_A Non-structural protein; 64.8 3.8 0.00013 27.1 2.1 24 89-112 123-146 (213)
135 2lrn_A Thiol:disulfide interch 64.6 19 0.00066 21.2 5.8 41 81-121 99-140 (152)
136 3lgi_A Protease DEGS; stress-s 64.2 4.1 0.00014 26.9 2.3 21 90-110 173-193 (237)
137 1svj_A Potassium-transporting 64.1 2.7 9.1E-05 26.3 1.3 34 80-114 121-154 (156)
138 3k6y_A Serine protease, possib 62.7 5 0.00017 26.4 2.5 21 90-110 180-200 (237)
139 2as9_A Serine protease; trypsi 62.6 4.5 0.00016 26.1 2.3 20 91-110 156-175 (210)
140 2w7s_A Serine protease SPLA; h 61.5 5.6 0.00019 25.3 2.5 19 93-111 154-172 (200)
141 3sti_A Protease DEGQ; serine p 61.0 5.6 0.00019 26.6 2.5 21 90-110 184-204 (245)
142 2vid_A Serine protease SPLB; h 58.8 6.6 0.00023 24.9 2.5 17 95-111 159-175 (204)
143 1qtf_A Exfoliative toxin B; se 57.9 6.9 0.00024 25.9 2.6 16 95-110 188-203 (246)
144 3fan_A Non-structural protein; 54.3 12 0.0004 24.8 3.1 30 4-34 121-150 (213)
145 2qkp_A Uncharacterized protein 53.5 9.1 0.00031 23.3 2.4 19 91-109 107-125 (151)
146 1agj_A Epidermolytic toxin A; 53.1 8.4 0.00029 25.3 2.3 16 95-110 197-212 (242)
147 2dho_A Isopentenyl-diphosphate 52.5 17 0.00059 24.0 3.8 22 92-113 26-47 (235)
148 2pny_A Isopentenyl-diphosphate 52.4 17 0.00059 24.3 3.8 22 92-113 37-58 (246)
149 2kuc_A Putative disulphide-iso 52.3 30 0.001 19.6 5.3 51 72-122 66-121 (130)
150 1lu4_A Soluble secreted antige 51.3 17 0.00057 20.7 3.3 38 83-120 91-134 (136)
151 3num_A Serine protease HTRA1; 50.4 10 0.00034 26.4 2.5 18 93-110 172-189 (332)
152 2fwh_A Thiol:disulfide interch 49.7 16 0.00053 21.4 3.0 51 71-121 68-127 (134)
153 1div_A Ribosomal protein L9; r 48.7 19 0.00065 22.3 3.3 23 99-121 84-106 (149)
154 1l1j_A Heat shock protease HTR 48.5 9.5 0.00032 25.3 2.0 20 91-110 181-200 (239)
155 3qo6_A Protease DO-like 1, chl 48.2 11 0.00039 26.4 2.5 21 90-110 177-197 (348)
156 3me7_A Putative uncharacterize 47.5 39 0.0013 20.6 4.7 30 93-122 128-162 (170)
157 2w5e_A Putative serine proteas 47.3 15 0.00051 22.9 2.7 22 6-28 123-144 (163)
158 1lcy_A HTRA2 serine protease; 47.1 12 0.00042 25.9 2.5 20 91-110 171-190 (325)
159 1te0_A Protease DEGS; two doma 46.9 13 0.00044 25.7 2.6 19 92-110 164-182 (318)
160 2o8l_A V8 protease, taphylococ 45.5 14 0.00047 24.9 2.5 18 93-110 169-186 (274)
161 2d4p_A Hypothetical protein TT 44.8 9 0.00031 23.6 1.3 31 79-111 23-53 (141)
162 3stj_A Protease DEGQ; serine p 44.8 14 0.00048 26.0 2.5 21 90-110 184-204 (345)
163 1zzo_A RV1677; thioredoxin fol 43.8 28 0.00095 19.7 3.4 37 85-121 95-134 (136)
164 1y8t_A Hypothetical protein RV 43.3 14 0.00048 25.5 2.3 20 91-110 167-186 (324)
165 4agk_A Capsid protein, coat pr 43.3 17 0.00058 22.2 2.3 19 90-108 106-124 (158)
166 2l5o_A Putative thioredoxin; s 42.5 28 0.00097 20.3 3.4 41 82-122 97-141 (153)
167 3zxu_A MCM21; cell cycle, COMA 41.7 9.1 0.00031 26.5 1.1 18 7-25 123-140 (296)
168 1r7h_A NRDH-redoxin; thioredox 41.2 25 0.00085 17.8 2.7 47 70-117 27-73 (75)
169 1wcz_A Glutamyl endopeptidase; 41.1 18 0.00061 24.3 2.5 16 95-110 171-186 (268)
170 1mbm_A NSP4 proteinase, chymot 40.8 17 0.00059 23.7 2.2 17 93-110 114-130 (198)
171 1svp_A Sindbis virus capsid pr 40.6 20 0.00067 22.0 2.3 16 93-108 110-125 (161)
172 1vcp_A Semliki forest virus ca 40.5 20 0.00069 21.6 2.3 17 92-108 100-116 (149)
173 3raz_A Thioredoxin-related pro 40.0 43 0.0015 19.6 4.0 43 79-121 91-139 (151)
174 3r8s_H 50S ribosomal protein L 39.6 48 0.0016 20.5 4.1 22 99-120 85-106 (149)
175 1qst_A TGCN5 histone acetyl tr 39.1 46 0.0016 19.5 4.0 23 89-111 43-65 (160)
176 4evm_A Thioredoxin family prot 38.6 52 0.0018 18.3 5.1 37 83-119 96-136 (138)
177 3ha9_A Uncharacterized thiored 38.2 62 0.0021 19.1 7.1 31 90-120 129-162 (165)
178 1ttz_A Conserved hypothetical 38.1 16 0.00056 20.0 1.7 46 71-121 29-76 (87)
179 1ep5_B Capsid protein C, coat 38.1 23 0.00078 21.6 2.3 16 93-108 108-123 (157)
180 3fw2_A Thiol-disulfide oxidore 37.9 60 0.0021 18.9 4.4 37 82-118 107-144 (150)
181 3t9y_A Acetyltransferase, GNAT 37.8 48 0.0016 18.7 3.9 27 84-110 42-68 (150)
182 2dxq_A AGR_C_4057P, acetyltran 37.4 51 0.0017 19.1 4.0 28 84-111 42-69 (150)
183 2h30_A Thioredoxin, peptide me 37.3 58 0.002 19.1 4.3 40 82-121 112-155 (164)
184 2ju5_A Thioredoxin disulfide i 37.3 66 0.0022 19.1 5.4 41 81-121 106-151 (154)
185 3fkf_A Thiol-disulfide oxidore 37.1 59 0.002 18.6 4.5 39 82-120 105-144 (148)
186 4dah_A Sporulation kinase D; a 36.8 30 0.001 21.8 3.0 18 7-25 68-85 (217)
187 1ygh_A ADA4, protein (transcri 36.5 67 0.0023 19.0 4.7 25 87-111 42-66 (164)
188 2l57_A Uncharacterized protein 35.6 49 0.0017 18.7 3.6 52 70-121 60-116 (126)
189 3mgd_A Predicted acetyltransfe 35.6 56 0.0019 18.6 4.0 28 83-110 41-68 (157)
190 2q04_A Acetoin utilization pro 35.3 53 0.0018 21.2 4.0 29 82-110 50-78 (211)
191 2bmx_A Alkyl hydroperoxidase C 34.6 82 0.0028 19.5 5.2 30 91-120 131-168 (195)
192 4ag7_A Glucosamine-6-phosphate 34.0 69 0.0024 18.4 4.3 30 82-111 56-88 (165)
193 2hje_A Autoinducer 2 sensor ki 34.0 29 0.00099 23.0 2.5 26 9-34 119-144 (221)
194 3jvn_A Acetyltransferase; alph 33.8 59 0.002 18.8 3.9 24 87-110 50-73 (166)
195 3ka5_A Ribosome-associated pro 33.6 56 0.0019 17.2 4.2 34 76-109 11-44 (65)
196 1z4e_A Transcriptional regulat 33.4 59 0.002 18.7 3.8 28 83-110 45-72 (153)
197 3i3g_A N-acetyltransferase; ma 33.3 65 0.0022 18.5 4.0 29 82-110 54-83 (161)
198 2eui_A Probable acetyltransfer 33.0 67 0.0023 18.0 4.9 27 84-110 38-66 (153)
199 2ggt_A SCO1 protein homolog, m 32.8 76 0.0026 18.6 4.3 28 94-121 129-160 (164)
200 3eyt_A Uncharacterized protein 32.7 50 0.0017 19.3 3.4 41 82-122 108-152 (158)
201 1nkw_F 50S ribosomal protein L 32.5 56 0.0019 20.1 3.5 20 101-120 84-103 (146)
202 4fd7_A Putative arylalkylamine 32.4 91 0.0031 20.0 4.9 29 82-110 76-104 (238)
203 3k2t_A LMO2511 protein; lister 32.2 54 0.0019 16.7 4.1 34 75-108 10-43 (57)
204 2ywi_A Hypothetical conserved 32.1 66 0.0023 19.7 4.1 38 85-122 124-174 (196)
205 1bo4_A Protein (serratia marce 32.0 62 0.0021 18.7 3.8 31 81-111 64-94 (168)
206 1prx_A HORF6; peroxiredoxin, h 32.0 97 0.0033 20.0 4.9 30 92-121 131-168 (224)
207 2h5c_A Alpha-lytic protease; s 31.2 35 0.0012 21.9 2.6 22 90-111 140-161 (198)
208 1s3z_A Aminoglycoside 6'-N-ace 31.0 72 0.0025 18.5 3.9 28 84-111 54-81 (165)
209 3ic4_A Glutaredoxin (GRX-1); s 30.9 23 0.00078 19.0 1.5 32 87-118 60-91 (92)
210 3a2v_A Probable peroxiredoxin; 30.7 77 0.0026 21.1 4.3 30 91-120 123-160 (249)
211 2l5l_A Thioredoxin; structural 30.7 53 0.0018 18.9 3.2 52 70-122 72-126 (136)
212 2aj6_A Hypothetical protein MW 30.6 73 0.0025 18.5 3.9 23 88-110 60-82 (159)
213 3pv2_A DEGQ; trypsin fold, PDZ 30.6 32 0.0011 25.2 2.5 19 92-110 204-222 (451)
214 3ia1_A THIO-disulfide isomeras 30.5 41 0.0014 19.6 2.8 44 79-122 97-144 (154)
215 2yew_A Capsid protein, coat pr 30.1 34 0.0012 22.8 2.3 16 93-108 205-220 (253)
216 2z10_A Ribosomal-protein-alani 29.9 90 0.0031 18.7 4.4 30 82-111 52-81 (194)
217 3eg7_A Spermidine N1-acetyltra 29.9 79 0.0027 18.4 4.0 33 79-111 41-77 (176)
218 2fkb_A Putative nudix hydrolas 29.8 86 0.0029 19.0 4.3 25 91-115 8-32 (180)
219 3cwf_A Alkaline phosphatase sy 29.7 76 0.0026 18.0 3.8 27 81-107 37-63 (122)
220 2dml_A Protein disulfide-isome 29.7 70 0.0024 18.0 3.6 51 71-122 70-124 (130)
221 4fln_A Protease DO-like 2, chl 29.4 29 0.001 26.2 2.2 14 96-109 203-216 (539)
222 1kxf_A Sindbis virus capsid pr 28.9 36 0.0012 22.9 2.3 16 93-108 215-230 (264)
223 3lor_A Thiol-disulfide isomera 28.8 90 0.0031 18.2 4.9 40 83-122 112-155 (160)
224 2i79_A Acetyltransferase, GNAT 28.5 94 0.0032 18.3 4.3 22 90-111 56-77 (172)
225 2gx5_A GTP-sensing transcripti 28.3 1E+02 0.0035 19.5 4.3 35 76-110 30-64 (170)
226 3ey5_A Acetyltransferase-like, 28.2 99 0.0034 18.4 4.3 35 77-111 34-68 (181)
227 3tth_A Spermidine N1-acetyltra 28.1 91 0.0031 18.0 4.7 33 79-111 40-76 (170)
228 3kh7_A Thiol:disulfide interch 27.9 1E+02 0.0036 18.6 4.9 36 85-120 126-165 (176)
229 1zof_A Alkyl hydroperoxide-red 27.8 82 0.0028 19.5 3.9 31 91-121 122-160 (198)
230 1xcc_A 1-Cys peroxiredoxin; un 27.8 1.1E+02 0.0036 19.7 4.6 30 92-121 128-165 (220)
231 2f9s_A Thiol-disulfide oxidore 27.6 93 0.0032 17.9 4.8 38 84-121 96-137 (151)
232 3exn_A Probable acetyltransfer 27.5 89 0.003 17.7 3.9 22 90-111 59-80 (160)
233 2kmv_A Copper-transporting ATP 27.3 59 0.002 20.6 3.1 28 84-112 157-184 (185)
234 3hxs_A Thioredoxin, TRXP; elec 27.1 69 0.0024 18.4 3.3 52 70-122 85-139 (141)
235 1we0_A Alkyl hydroperoxide red 27.1 89 0.003 19.1 4.0 31 91-121 118-156 (187)
236 2rli_A SCO2 protein homolog, m 27.1 1E+02 0.0035 18.2 4.6 28 94-121 132-163 (171)
237 4evy_A Aminoglycoside N(6')-ac 26.9 83 0.0028 18.3 3.7 27 84-110 54-80 (166)
238 4hde_A SCO1/SENC family lipopr 26.8 1.1E+02 0.0038 18.5 5.2 17 93-109 135-151 (170)
239 2v2g_A Peroxiredoxin 6; oxidor 26.7 1.1E+02 0.0039 19.9 4.6 30 92-121 127-164 (233)
240 1pm3_A MTH1895; unknown functi 26.6 56 0.0019 18.4 2.6 27 4-31 21-48 (97)
241 2b5x_A YKUV protein, TRXY; thi 26.6 93 0.0032 17.6 4.2 40 82-121 101-144 (148)
242 3dsb_A Putative acetyltransfer 26.4 73 0.0025 17.9 3.3 24 87-110 49-72 (157)
243 3lyv_A Ribosome-associated fac 26.3 79 0.0027 16.7 3.7 33 76-108 12-44 (66)
244 1ky9_A Protease DO, DEGP, HTRA 26.2 42 0.0014 24.5 2.5 21 90-110 207-227 (448)
245 3lif_A Putative diguanylate cy 26.0 58 0.002 20.9 3.0 18 93-110 130-147 (254)
246 1f5m_A GAF; CGMP binding, sign 25.6 61 0.0021 20.2 3.0 21 91-111 131-151 (180)
247 3dwv_A Glutathione peroxidase- 25.5 96 0.0033 19.0 3.9 28 94-121 151-182 (187)
248 2lrt_A Uncharacterized protein 25.3 85 0.0029 18.4 3.5 26 83-108 105-130 (152)
249 2qml_A BH2621 protein; structu 25.2 97 0.0033 18.6 3.9 33 79-111 53-88 (198)
250 3e0y_A Conserved domain protei 25.1 60 0.0021 19.1 2.8 19 91-110 119-137 (181)
251 3c38_A Autoinducer 2 sensor ki 24.8 27 0.00094 23.9 1.2 25 9-33 138-162 (270)
252 2gan_A 182AA long hypothetical 24.6 1.2E+02 0.0041 18.2 4.5 22 90-111 64-85 (190)
253 2arf_A Wilson disease ATPase; 24.6 69 0.0024 19.7 3.1 26 86-112 140-165 (165)
254 4h89_A GCN5-related N-acetyltr 24.5 73 0.0025 19.0 3.1 35 76-110 40-78 (173)
255 4hi4_A Aerotaxis transducer AE 24.4 52 0.0018 18.2 2.3 18 92-109 96-113 (121)
256 2o28_A Glucosamine 6-phosphate 23.9 1E+02 0.0035 18.3 3.8 22 90-111 81-104 (184)
257 3dr6_A YNCA; acetyltransferase 23.8 97 0.0033 17.7 3.6 19 93-111 54-72 (174)
258 2jsy_A Probable thiol peroxida 23.5 1.2E+02 0.0042 17.9 4.3 28 93-120 129-165 (167)
259 1kng_A Thiol:disulfide interch 23.3 1.2E+02 0.0039 17.5 4.7 34 87-120 113-150 (156)
260 1y9w_A Acetyltransferase; stru 23.3 79 0.0027 17.8 3.0 19 93-111 40-58 (140)
261 2nv4_A UPF0066 protein AF_0241 23.1 27 0.00093 21.6 0.9 31 1-31 54-84 (147)
262 3ksh_A Putative uncharacterize 23.1 65 0.0022 19.9 2.7 19 92-111 115-133 (160)
263 1h75_A Glutaredoxin-like prote 23.0 22 0.00077 18.4 0.5 47 70-117 27-73 (81)
264 2cvb_A Probable thiol-disulfid 22.7 76 0.0026 19.3 3.0 33 90-122 115-159 (188)
265 1vkc_A Putative acetyl transfe 22.7 1E+02 0.0035 17.7 3.5 28 84-111 52-80 (158)
266 2hz5_A Dynein light chain 2A, 22.3 62 0.0021 18.7 2.3 27 79-105 13-40 (106)
267 1tiq_A Protease synthase and s 22.2 1.2E+02 0.004 18.1 3.8 22 90-111 56-77 (180)
268 2lja_A Putative thiol-disulfid 22.0 74 0.0025 18.4 2.8 40 83-122 100-143 (152)
269 1qsm_A HPA2 histone acetyltran 22.0 1.1E+02 0.0039 17.0 3.9 20 91-110 50-71 (152)
270 3rfb_A Putative uncharacterize 22.0 70 0.0024 20.1 2.7 19 92-111 116-134 (171)
271 1n9l_A PHOT-LOV1, putative blu 22.0 70 0.0024 17.2 2.5 16 94-109 87-102 (109)
272 3mmh_A FRMSR, methionine-R-sul 21.8 71 0.0024 19.8 2.7 19 92-111 116-134 (167)
273 3fyn_A Integron gene cassette 21.7 81 0.0028 18.5 2.9 22 90-111 68-89 (176)
274 2k6v_A Putative cytochrome C o 21.7 93 0.0032 18.4 3.2 27 91-118 137-169 (172)
275 3nzn_A Glutaredoxin; structura 21.7 55 0.0019 18.0 2.0 36 82-117 64-101 (103)
276 4fo5_A Thioredoxin-like protei 21.5 94 0.0032 17.8 3.1 26 83-108 105-130 (143)
277 1jfu_A Thiol:disulfide interch 21.5 1.4E+02 0.0049 17.9 5.8 32 91-122 143-180 (186)
278 2fp7_B Serine protease NS3; fl 21.4 57 0.002 20.7 2.1 18 90-107 117-134 (172)
279 3t90_A Glucose-6-phosphate ace 21.4 1E+02 0.0035 17.2 3.3 26 86-111 43-71 (149)
280 1z4r_A General control of amin 21.4 1.3E+02 0.0045 17.4 4.1 29 83-111 44-72 (168)
281 3ci6_A Phosphoenolpyruvate-pro 21.2 75 0.0026 18.2 2.7 18 92-110 117-134 (171)
282 3trc_A Phosphoenolpyruvate-pro 21.1 75 0.0026 18.4 2.7 17 93-110 116-132 (171)
283 2pdo_A Acetyltransferase YPEA; 21.1 1.3E+02 0.0043 17.1 3.8 18 93-110 46-63 (144)
284 3f8k_A Protein acetyltransfera 21.0 70 0.0024 18.3 2.5 20 92-111 53-72 (160)
285 1ysp_A Transcriptional regulat 20.9 71 0.0024 19.7 2.6 21 11-32 126-146 (181)
286 2q0y_A GCN5-related N-acetyltr 20.7 1.3E+02 0.0045 17.2 4.1 20 91-110 51-70 (153)
287 3hcy_A Putative two-component 20.7 85 0.0029 18.0 2.8 18 92-110 93-110 (151)
288 4e0a_A BH1408 protein; structu 20.7 1.1E+02 0.0036 17.4 3.3 33 77-110 39-72 (164)
289 3obf_A Putative transcriptiona 20.4 71 0.0024 19.6 2.5 21 11-32 125-145 (176)
290 2fb5_A Hypothetical membrane s 20.4 1E+02 0.0036 20.1 3.3 30 74-103 70-103 (205)
291 3erw_A Sporulation thiol-disul 20.3 61 0.0021 18.4 2.1 35 83-117 106-144 (145)
292 3s6f_A Hypothetical acetyltran 20.2 1.3E+02 0.0045 17.1 4.3 31 79-110 36-66 (145)
293 1xzo_A BSSCO, hypothetical pro 20.2 1.5E+02 0.005 17.5 5.0 29 92-120 136-170 (174)
294 1pq7_A Trypsin; ultra-high res 20.0 73 0.0025 20.3 2.6 16 96-111 183-198 (224)
295 2o99_A Acetate operon represso 20.0 73 0.0025 19.7 2.5 21 11-32 130-150 (182)
No 1
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.82 E-value=2e-20 Score=121.43 Aligned_cols=114 Identities=17% Similarity=0.240 Sum_probs=81.1
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccC-cHH---HHHhhh--hhcHHHHHHHHhcCCCCCCCccccccceEEEeC
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGC-HYA---VLQTWL--PLTALEFTQQVLTSPLFSESNTTQQRELLTCQV 76 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~-~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~ 76 (126)
.|.+++++++||+|++| +++|+||.+|+... ... ...... ..+..............++ ..+|+++++++.+
T Consensus 43 ~m~~~~~~~~pVvd~~g-~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~im~~~~~tv~~ 120 (170)
T 4esy_A 43 TMLEHQIGCAPVVDQNG-HLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHLFETGRKLTA-SAVMTQPVVTAAP 120 (170)
T ss_dssp HHHHTTCSEEEEECTTS-CEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHHHHHHTTCBH-HHHCBCCSCCBCT
T ss_pred HHHHcCCeEEEEEcCCc-cEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhhhccccccch-hhhcccCcccCCc
Confidence 36789999999999888 99999999999543 111 100000 0111111111111111111 2378889999999
Q ss_pred CCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 77 DSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 77 ~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++++.+|+++|.+++++++||+| +|+++|+||++||++++..
T Consensus 121 ~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 121 EDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp TSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCC
T ss_pred chhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999 6999999999999987644
No 2
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.79 E-value=7.5e-20 Score=117.57 Aligned_cols=100 Identities=12% Similarity=0.235 Sum_probs=77.6
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHH---HhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCC
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVL---QTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSP 79 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~ 79 (126)
.|.+++++++||+|+++ +++|++|.+|+........ ......++. .+|.+++.+++++++
T Consensus 42 ~m~~~~~s~~pVvd~~~-~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~----------------~im~~~~~~v~~~~~ 104 (156)
T 3k6e_A 42 LLSQMTYTRVPVVTDEK-QFVGTIGLRDIMAYQMEHDLSQEIMADTDIV----------------HMTKTDVAVVSPDFT 104 (156)
T ss_dssp HHTTSSSSEEEEECC-C-BEEEEEEHHHHHHHHHHHTCCHHHHTTSBGG----------------GTCBCSCCCBCTTCC
T ss_pred HHHHcCCcEEEEEcCCC-cEEEEEEecchhhhhhhcccccccccccCHH----------------HhhcCCceecccccH
Confidence 36789999999999887 9999999999954321110 001111222 267889999999999
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhh
Q 039385 80 LSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 80 l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~ 121 (126)
+.+|+++|.+++ .+||+|++|+++|+||+.||++++....
T Consensus 105 l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 105 ITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp HHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHh
Confidence 999999998775 4999999999999999999999986543
No 3
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.78 E-value=2.8e-19 Score=111.34 Aligned_cols=100 Identities=15% Similarity=0.095 Sum_probs=78.4
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++++||++++.++++|++|.+|+....... ..+...++.+ +| +++.++.+++++.+
T Consensus 29 ~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~-~~~~~~~v~~----------------~m-~~~~~v~~~~~l~~ 90 (130)
T 3hf7_A 29 QLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK-KEFTKEIMLR----------------AA-DEIYFVPEGTPLST 90 (130)
T ss_dssp HHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS-SCCCHHHHHH----------------HS-BCCCEEETTCBHHH
T ss_pred HHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc-CccchhhHHH----------------hc-cCCeEeCCCCcHHH
Confidence 467899999999976434999999999996431111 0011123444 34 47789999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
|++.|.+++.+.+||+|++|+++|+||+.|+++.+...
T Consensus 91 ~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 91 QLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp HHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred HHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 99999999999999999999999999999999998754
No 4
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.78 E-value=5.9e-19 Score=109.28 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=77.4
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++++||+|++.++++|++|.+|+....... ....++.++| + ++.++.+++++.+
T Consensus 30 ~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~---~~~~~v~~~m----------------~-~~~~v~~~~~l~~ 89 (127)
T 3nqr_A 30 VIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSD---AEAFSMDKVL----------------R-TAVVVPESKRVDR 89 (127)
T ss_dssp HHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTT---CCCCCHHHHC----------------B-CCCEEETTCBHHH
T ss_pred HHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcc---CCCCCHHHHc----------------C-CCeEECCCCcHHH
Confidence 356788999999998723999999999996542111 1233555543 3 4678999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
|+..|.+++.+.+||+|++|+++|+||+.|+++.+.
T Consensus 90 a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 90 MLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIV 125 (127)
T ss_dssp HHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC-
T ss_pred HHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 999999999999999999999999999999998764
No 5
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.78 E-value=7.4e-19 Score=109.24 Aligned_cols=97 Identities=20% Similarity=0.168 Sum_probs=79.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|++.++++|++|.+|+....... ....++.++| +++.++.+++++.+
T Consensus 33 ~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~---~~~~~v~~~m-----------------~~~~~v~~~~~l~~ 92 (130)
T 3i8n_A 33 KHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSG---SGQKQLGAVM-----------------RPIQVVLNNTALPK 92 (130)
T ss_dssp HTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTT---TTTSBHHHHS-----------------EECCEEETTSCHHH
T ss_pred HHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcC---CCcCCHHHHh-----------------cCCcCcCCCCcHHH
Confidence 467899999999998723999999999996442111 1133555543 36789999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
|++.|.+++.+.+||+|++|+++|+||+.|+++.+..
T Consensus 93 ~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 93 VFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp HHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 9999999999999999999999999999999998753
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.77 E-value=2.2e-19 Score=112.55 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=77.2
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++++||+|++.++++|++|.+|+....... .....++.+ +|+ ++.++.+++++.+
T Consensus 30 ~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~--~~~~~~v~~----------------~m~-~~~~v~~~~~l~~ 90 (136)
T 3lfr_A 30 AVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKA--DGDSDDVKK----------------LLR-PATFVPESKRLNV 90 (136)
T ss_dssp HHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSS--SGGGCCGGG----------------TCB-CCCEEETTCBHHH
T ss_pred HHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhc--cCCCcCHHH----------------HcC-CCeEECCCCcHHH
Confidence 466788999999998723999999999996542211 001223333 454 4889999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILAD 124 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~~ 124 (126)
|+.+|.+++.+.+||+|++|+++|+||+.|+++.+...+..+
T Consensus 91 ~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de 132 (136)
T 3lfr_A 91 LLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDE 132 (136)
T ss_dssp HHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-------
T ss_pred HHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCc
Confidence 999999999999999999999999999999999887766543
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.77 E-value=7.7e-19 Score=109.10 Aligned_cols=95 Identities=16% Similarity=0.159 Sum_probs=77.2
Q ss_pred cccCCCCceeeEeeCC-CceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGN-GWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~-~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+|++ + +++|++|.+|+....... ..++.+ +|+ ++.++.+++++.
T Consensus 32 ~m~~~~~~~~pVvd~~~~-~~~Givt~~dl~~~~~~~-----~~~v~~----------------~m~-~~~~v~~~~~l~ 88 (129)
T 3jtf_A 32 TIIETAHSRFPVYEDDRD-NIIGILLAKDLLRYMLEP-----ALDIRS----------------LVR-PAVFIPEVKRLN 88 (129)
T ss_dssp HHHHSCCSEEEEESSSTT-CEEEEEEGGGGGGGGTCT-----TSCGGG----------------GCB-CCCEEETTCBHH
T ss_pred HHHHcCCCEEEEEcCCCC-cEEEEEEHHHHHhHhccC-----CcCHHH----------------HhC-CCeEeCCCCcHH
Confidence 4678899999999986 5 999999999996442110 112222 444 578999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
+|+.+|.+++.+.+||+|++|+++|+||+.|+++.+...
T Consensus 89 ~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 89 VLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp HHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHT
T ss_pred HHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 999999999999999999889999999999999998754
No 8
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.77 E-value=7.9e-19 Score=114.15 Aligned_cols=99 Identities=22% Similarity=0.193 Sum_probs=81.2
Q ss_pred cccCCCCceeeEeeCC-CceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGN-GWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~-~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
+|.+++++.+||+|++ + +++|++|.+|+....... ...++. .+| ++++++.+++++.
T Consensus 69 ~m~~~~~~~~pVvd~~~~-~lvGivt~~dl~~~~~~~----~~~~v~----------------~im-~~~~~v~~~~~l~ 126 (172)
T 3lhh_A 69 TVMQSPHSRFPVCRNNVD-DMVGIISAKQLLSESIAG----ERLELV----------------DLV-KNCNFVPNSLSGM 126 (172)
T ss_dssp HHHTCCCSEEEEESSSTT-SEEEEEEHHHHHHHHHTT----CCCCGG----------------GGC-BCCEEEETTCCHH
T ss_pred HHHhCCCCEEEEEeCCCC-eEEEEEEHHHHHHHHhhc----CcccHH----------------HHh-cCCeEeCCCCCHH
Confidence 4678999999999987 6 999999999996432111 011222 266 6889999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILA 123 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~ 123 (126)
+|+..|.+++.+.+||+|++|+++|+||+.|+++.+...+..
T Consensus 127 ~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~d 168 (172)
T 3lhh_A 127 ELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQ 168 (172)
T ss_dssp HHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC-
T ss_pred HHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCcc
Confidence 999999999999999999889999999999999999876654
No 9
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.77 E-value=9.2e-19 Score=110.97 Aligned_cols=96 Identities=15% Similarity=0.211 Sum_probs=79.0
Q ss_pred cccCCCCceeeEeeCC-CceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGN-GWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~-~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+|++ + +++|++|.+|+........ ..++. .+| +++.++.+++++.
T Consensus 50 ~m~~~~~~~~pVvd~~~~-~lvGivt~~dl~~~~~~~~----~~~v~----------------~~m-~~~~~v~~~~~l~ 107 (148)
T 3lv9_A 50 ILKEEGVTRYPVCRKNKD-DILGFVHIRDLYNQKINEN----KIELE----------------EIL-RDIIYISENLTID 107 (148)
T ss_dssp HHHHSCCSEEEEESSSTT-SEEEEEEHHHHHHHHHHHS----CCCGG----------------GTC-BCCEEEETTSBHH
T ss_pred HHHHCCCCEEEEEcCCCC-cEEEEEEHHHHHHHHhcCC----CccHH----------------Hhc-CCCeEECCCCCHH
Confidence 3667899999999987 5 9999999999964321110 11222 256 6889999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
+|+..|.+++.+.+||+|++|+++|+||+.|+++.+...
T Consensus 108 ~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 108 KALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp HHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred HHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 999999999999999999889999999999999998764
No 10
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=3e-18 Score=108.45 Aligned_cols=116 Identities=15% Similarity=0.129 Sum_probs=80.0
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|++|.+|+......... +. ...++........ ......+|.+++.++.+++++.+
T Consensus 32 ~~~~~~~~~~~Vvd~~~-~~~G~vt~~dl~~~~~~~~~-~~--~~~~~~~~~~~~~-~~~v~~~m~~~~~~v~~~~~l~~ 106 (152)
T 4gqw_A 32 LLVENRITGFPVIDEDW-KLVGLVSDYDLLALDSGDST-WK--TFNAVQKLLSKTN-GKLVGDLMTPAPLVVEEKTNLED 106 (152)
T ss_dssp HHHHTTCSEEEEECTTC-BEEEEEEHHHHTTCC----C-CH--HHHHHHTC------CCBHHHHSEESCCCEESSSBHHH
T ss_pred HHHHcCCceEEEEeCCC-eEEEEEEHHHHHHhhcccCc-cc--chHHHHHHHHHhc-cccHHHhcCCCceEECCCCcHHH
Confidence 46678999999999887 99999999999765221100 00 0000000000000 01112256678889999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILA 123 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~ 123 (126)
|+++|.+++.+.+||+|++|+++|+||..|+++.+.+....
T Consensus 107 a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~~~ 147 (152)
T 4gqw_A 107 AAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 147 (152)
T ss_dssp HHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC----
T ss_pred HHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhcccc
Confidence 99999999999999999899999999999999998875543
No 11
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.76 E-value=8e-19 Score=111.97 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=78.3
Q ss_pred cccCCCCceeeEe-eCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSIS-LGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVv-d~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++++||+ |+++++++|++|.+|+....... ...++. .+| +++.++.+++++.
T Consensus 47 ~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~----~~~~v~----------------~~m-~~~~~v~~~~~l~ 105 (153)
T 3oco_A 47 LYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID----DKAKIS----------------TIM-RDIVSVPENMKVP 105 (153)
T ss_dssp HHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH----TTSBGG----------------GTC-BCCEEEETTSBHH
T ss_pred HHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC----CCCcHH----------------HHh-CCCeEECCCCCHH
Confidence 3667889999999 65434999999999996432111 011222 266 6889999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILA 123 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~ 123 (126)
+|+..|.+++.+.+||+|++|+++|+||+.|+++.+...+..
T Consensus 106 ~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~d 147 (153)
T 3oco_A 106 DVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRD 147 (153)
T ss_dssp HHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC----
T ss_pred HHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCC
Confidence 999999999999999999899999999999999999876654
No 12
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.75 E-value=3e-18 Score=107.62 Aligned_cols=107 Identities=24% Similarity=0.330 Sum_probs=80.1
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|++|.+|+..............++.++|..-.. -..++.++.+++++.+
T Consensus 36 ~~~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~----------~~~~~~~v~~~~~l~~ 104 (144)
T 2nyc_A 36 MLTQGRVSSVPIIDENG-YLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSD----------DFEGVYTCTKNDKLST 104 (144)
T ss_dssp HHHHHTCSEEEEECTTC-BEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC----------------CEECTTSBHHH
T ss_pred HHHHcCcceeeEEcCCC-cEEEEEcHHHHHHHhcccccccCCccHHHHHhcCcc----------ccCCCeEECCCCcHHH
Confidence 35677899999999887 999999999996432211111234577777643000 0015789999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
+++.|.+++.+.+||+|++|+++|+||+.|+++.+...
T Consensus 105 ~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 105 IMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp HHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHhc
Confidence 99999999999999999889999999999999988653
No 13
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.75 E-value=6.4e-18 Score=109.84 Aligned_cols=117 Identities=16% Similarity=0.076 Sum_probs=82.5
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHH-----------hhhhhcHHHHHHHHhcCCCCCCCccccccce
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQ-----------TWLPLTALEFTQQVLTSPLFSESNTTQQREL 71 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~ 71 (126)
.|.+++++.+||+|+++ +++|+||.+|+..+...... ...+....++...+......+. ..+|.+++
T Consensus 31 ~m~~~~~~~~pVvd~~~-~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~m~~~~ 108 (180)
T 3sl7_A 31 LLVEKKVTGLPVIDDNW-TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVV-GDLMTPSP 108 (180)
T ss_dssp HHHHHTCSEEEEECTTC-BEEEEEEHHHHTCC-------------------CCCSHHHHHHHHHTTTTCBH-HHHSEESC
T ss_pred HHHHcCCCeEEEECCCC-eEEEEEEHHHHHhhhhhccccCCcccccccccchhhhhHHHHHHHhccccccH-HHHhCCCc
Confidence 35678899999999888 99999999999753110000 0000011111111111111111 23677788
Q ss_pred EEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhh
Q 039385 72 LTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 72 ~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~ 121 (126)
.++.+++++.+|+++|.+++++.+||+|++|+++|+||+.|+++.+.+..
T Consensus 109 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~ 158 (180)
T 3sl7_A 109 LVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIK 158 (180)
T ss_dssp CCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred eEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987654
No 14
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.75 E-value=4.2e-18 Score=113.88 Aligned_cols=94 Identities=14% Similarity=0.100 Sum_probs=79.2
Q ss_pred CCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHHHHHH
Q 039385 8 NVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEVIGKA 87 (126)
Q Consensus 8 ~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m 87 (126)
++..+||+|+++ +++|++|.+|+..... ..++.+ +|.++++++.+++++.+|++.|
T Consensus 87 ~~~~~~Vvd~~~-~lvGivt~~dll~~~~-------~~~v~~----------------im~~~~~~v~~~~~l~~a~~~m 142 (205)
T 3kxr_A 87 CNDNLFIVDEAD-KYLGTVRRYDIFKHEP-------HEPLIS----------------LLSEDSRALTANTTLLDAAEAI 142 (205)
T ss_dssp TCCEEEEECTTC-BEEEEEEHHHHTTSCT-------TSBGGG----------------GCCSSCCCEETTSCHHHHHHHH
T ss_pred CeeEEEEEcCCC-eEEEEEEHHHHHhCCC-------cchHHH----------------HhcCCCeEECCCCCHHHHHHHH
Confidence 789999999887 9999999999964321 113333 6677899999999999999999
Q ss_pred HhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhhhc
Q 039385 88 LTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILADF 125 (126)
Q Consensus 88 ~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~~~ 125 (126)
.+++++.+||+|++|+++|+||..|+++.+.+...+|+
T Consensus 143 ~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~ed~ 180 (205)
T 3kxr_A 143 EHSREIELPVIDDAGELIGRVTLRAATALVREHYEAQL 180 (205)
T ss_dssp HTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC---
T ss_pred HhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877665
No 15
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=1.1e-18 Score=112.61 Aligned_cols=102 Identities=16% Similarity=0.216 Sum_probs=80.4
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|++|.+|+..............++.+ +|.+++.++.+++++.+
T Consensus 52 ~~~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~~~~~~~~~v~~----------------~m~~~~~~v~~~~~l~~ 114 (165)
T 3fhm_A 52 TLHAHKIGAVVVTDADG-VVLGIFTERDLVKAVAGQGAASLQQSVSV----------------AMTKNVVRCQHNSTTDQ 114 (165)
T ss_dssp HHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHHHHGGGGGTSBGGG----------------TSBSSCCCBCTTCBHHH
T ss_pred HHHHcCCCEEEEEcCCC-eEEEEEEHHHHHHHHHhcCCccccCCHHH----------------HhcCCCeEECCCCcHHH
Confidence 35678899999999887 99999999999643222111112223333 56678899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
|++.|.+++.+.+||+|+ |+++|+||..||++.+.+...
T Consensus 115 a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~~ 153 (165)
T 3fhm_A 115 LMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEIE 153 (165)
T ss_dssp HHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC--
T ss_pred HHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHHH
Confidence 999999999999999997 999999999999999876544
No 16
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.74 E-value=4.8e-18 Score=108.77 Aligned_cols=91 Identities=15% Similarity=0.176 Sum_probs=75.4
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++++++|++|.+|+....... ...++.++| + ++.++.+++++.+
T Consensus 65 ~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~----~~~~v~~im----------------~-~~~~v~~~~~l~~ 123 (156)
T 3oi8_A 65 YVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP----EQFHLKSIL----------------R-PAVFVPEGKSLTA 123 (156)
T ss_dssp HHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG----GGCCHHHHC----------------B-CCCEEETTSBHHH
T ss_pred HHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC----CcccHHHHc----------------C-CCEEECCCCCHHH
Confidence 466788999999998744999999999996542111 233566654 3 4789999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMI 114 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil 114 (126)
|+..|.+++.+.+||+|++|+++|+||+.|++
T Consensus 124 a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 124 LLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp HHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred HHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 99999999999999999999999999999986
No 17
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.74 E-value=1.1e-18 Score=111.20 Aligned_cols=106 Identities=22% Similarity=0.349 Sum_probs=78.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|++|.+|+..............++.++|.. ...|.+++.++.+++++.+
T Consensus 46 ~m~~~~~~~~pVvd~~~-~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~----------~~~~~~~~~~v~~~~~l~~ 114 (152)
T 2uv4_A 46 IFVQHRVSALPVVDEKG-RVVDIYSKFDVINLAAEKTYNNLDVSVTKALQH----------RSHYFEGVLKCYLHETLET 114 (152)
T ss_dssp HHHHHCCSEEEEECTTS-BEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGT----------CCHHHHTCSEECTTSBHHH
T ss_pred HHHHcCCceEeEECCCC-cEEEEEeHHHHHHHhcchhhhhhcchHHHHHhh----------hhcccCCCeEECCCCcHHH
Confidence 35677899999999887 999999999996431111000011233333310 0012268899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
|++.|.+++.+.+||+|++|+++|+||+.|+++.+.+
T Consensus 115 a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 115 IINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp HHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC-
T ss_pred HHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 9999999999999999988999999999999998754
No 18
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.74 E-value=1.6e-18 Score=106.25 Aligned_cols=95 Identities=25% Similarity=0.319 Sum_probs=78.1
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|+++.+|+....... ..++.+ +|.+++.++.+++++.+
T Consensus 26 ~~~~~~~~~~~Vvd~~~-~~~G~vt~~dl~~~~~~~-----~~~v~~----------------~~~~~~~~v~~~~~l~~ 83 (122)
T 3kpb_A 26 ILIKHNINHLPIVDEHG-KLVGIITSWDIAKALAQN-----KKTIEE----------------IMTRNVITAHEDEPVDH 83 (122)
T ss_dssp HHHHHTCSCEEEECTTS-BEEEEECHHHHHHHHHTT-----CCBGGG----------------TSBSSCCCEETTSBHHH
T ss_pred HHHHcCCCeEEEECCCC-CEEEEEEHHHHHHHHHhc-----ccCHHH----------------HhcCCCeEECCCCCHHH
Confidence 35678899999999887 999999999996432111 012222 56678899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+++.|.+++.+.+||+|++|+++|+||..|+++.+.+
T Consensus 84 ~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 84 VAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp HHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred HHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 9999999999999999988999999999999998765
No 19
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.74 E-value=1e-17 Score=118.00 Aligned_cols=107 Identities=24% Similarity=0.330 Sum_probs=84.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|++|.+|+..............++.++|..-. ...+++++|.+++++.+
T Consensus 215 ~m~~~~~~~~pVvd~~~-~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~----------~~~~~~~~v~~~~~l~~ 283 (323)
T 3t4n_C 215 MLTQGRVSSVPIIDENG-YLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRS----------DDFEGVYTCTKNDKLST 283 (323)
T ss_dssp HHHHHTCSEEEEECTTC-BEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGGSC----------TTCCCCEEECTTCBHHH
T ss_pred HHHHcCCCEEEEECCCC-eEEEEEeHHHHHHHHhhchhhhccCCHHHHHhhcc----------ccCCCCEEECCCCCHHH
Confidence 35678899999999888 99999999999654322221223457777663200 00127899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
|+++|.+++++++||+|++|+++|+||.+|+++.+...
T Consensus 284 ~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 284 IMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 99999999999999999999999999999999998653
No 20
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.73 E-value=4.3e-18 Score=107.94 Aligned_cols=101 Identities=7% Similarity=0.153 Sum_probs=79.0
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHH-H---HHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCC
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYA-V---LQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDS 78 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~ 78 (126)
.|.+++++.+||+|+++ +++|++|.+|+...... . .......++.+ +|.+++.++.+++
T Consensus 42 ~~~~~~~~~~pVvd~~~-~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~----------------~m~~~~~~v~~~~ 104 (150)
T 3lqn_A 42 VLVKSGYSAIPVLDPMY-KLHGLISTAMILDGILGLERIEFERLEEMKVEQ----------------VMKQDIPVLKLED 104 (150)
T ss_dssp HHHHHTCSEEEEECTTC-BEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG----------------TCBSSCCEEETTC
T ss_pred HHHHcCCcEEEEECCCC-CEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH----------------HhcCCCceeCCCC
Confidence 45678899999999887 99999999999532110 0 00111223333 5677889999999
Q ss_pred CHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 79 PLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 79 ~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
++.+|+..|.++++ +||+|++|+++|+||+.|+++.+.+...
T Consensus 105 ~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 105 SFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp BHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhH
Confidence 99999999999886 9999999999999999999999987654
No 21
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.72 E-value=1.5e-17 Score=106.77 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=80.4
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHH-------hhhhhcHHHHHHHHhcCCCCCCCccccccceEEEe
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQ-------TWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQ 75 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~ 75 (126)
.|.+++++.+||+|+++ +++|++|.+|+......... .....++.+ +|.+++.++.
T Consensus 30 ~m~~~~~~~~pVvd~~~-~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~----------------im~~~~~~v~ 92 (160)
T 2o16_A 30 LMEALDIRHVPIVDANK-KLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE----------------VMHTDVTSVA 92 (160)
T ss_dssp HHHHHTCSEEEEECTTC-BEEEEEEHHHHHHHHHHHCC---------CCCBHHH----------------HSCSCEEEBC
T ss_pred HHHHcCCCEEEEEcCCC-cEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH----------------HhcCCCeEEC
Confidence 35677899999999877 99999999999643221100 011223333 5667899999
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 76 VDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 76 ~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
+++++.+|+..|.+++.+.+||+|+ |+++|+||+.||++.+.+.+.
T Consensus 93 ~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~~ 138 (160)
T 2o16_A 93 PQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLLE 138 (160)
T ss_dssp TTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHhc
Confidence 9999999999999999999999997 999999999999999876543
No 22
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=1.8e-18 Score=107.16 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=79.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+ + +++|++|.+|+.....+... ...++. ++|.+++.++.+++++.+
T Consensus 30 ~~~~~~~~~~~Vvd~-~-~~~Givt~~dl~~~~~~~~~--~~~~v~----------------~~m~~~~~~v~~~~~l~~ 89 (128)
T 3gby_A 30 RLAASGCACAPVLDG-E-RYLGMVHLSRLLEGRKGWPT--VKEKLG----------------EELLETVRSYRPGEQLFD 89 (128)
T ss_dssp HHHHHTCSEEEEEET-T-EEEEEEEHHHHHTTCSSSCC--TTCBCC----------------GGGCBCCCCBCTTSBGGG
T ss_pred HHHHCCCcEEEEEEC-C-EEEEEEEHHHHHHHHhhCCc--ccCcHH----------------HHccCCCcEECCCCCHHH
Confidence 366788999999998 7 99999999999654211100 001122 266778899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
++..|.+++.+.+||+|++|+++|+||+.|+++.+.+.
T Consensus 90 ~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 90 NLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp SHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHTT
T ss_pred HHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHhh
Confidence 99999999999999999999999999999999998754
No 23
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.71 E-value=7.2e-18 Score=104.83 Aligned_cols=98 Identities=21% Similarity=0.286 Sum_probs=78.8
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccc-cCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLR-GCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+|+++ +++|++|.+|+. ....... .....++.++| .+++.++.+++++.
T Consensus 33 ~~~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~~~-~~~~~~v~~~m----------------~~~~~~v~~~~~l~ 94 (133)
T 1y5h_A 33 YMREHDIGALPICGDDD-RLHGMLTDRDIVIKGLAAGL-DPNTATAGELA----------------RDSIYYVDANASIQ 94 (133)
T ss_dssp HHHHHTCSEEEEECGGG-BEEEEEEHHHHHHTTGGGTC-CTTTSBHHHHH----------------TTCCCCEETTCCHH
T ss_pred HHHHhCCCeEEEECCCC-eEEEEEeHHHHHHHHHhcCC-CccccCHHHHh----------------cCCCEEECCCCCHH
Confidence 35677899999998877 999999999996 3422211 11234667765 45788999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++++.|.+++.+.+||+|+ |+++|+||+.|+++.+.+
T Consensus 95 ~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 95 EMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp HHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC-
T ss_pred HHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 9999999999999999997 999999999999987643
No 24
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.71 E-value=1e-17 Score=104.66 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=79.2
Q ss_pred cccCCCCceeeEeeCCCceeEEEeecccc-ccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDL-RGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+|+++ +++|++|.+|+ ....... .....++.++ |.+++.++.+++++.
T Consensus 33 ~~~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~~--~~~~~~v~~~----------------m~~~~~~v~~~~~l~ 93 (138)
T 2p9m_A 33 KMLKYKISSLPVIDDEN-KVIGIVTTTDIGYNLIRDK--YTLETTIGDV----------------MTKDVITIHEDASIL 93 (138)
T ss_dssp HHHHHTCCEEEEECTTC-BEEEEEEHHHHHHHHTTTC--CCSSCBHHHH----------------SCSSCCCEETTSBHH
T ss_pred HHHHCCCcEEEEECCCC-eEEEEEEHHHHHHHHHhhc--ccCCcCHHHH----------------hCCCcEEECCCCCHH
Confidence 35677899999999887 99999999999 5431111 0122355554 456889999999999
Q ss_pred HHHHHHHhcC-----CCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 82 EVIGKALTKH-----VHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 82 ~~~~~m~~~~-----~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
++++.|.+++ .+.+||+|++|+++|+||..|+++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 137 (138)
T 2p9m_A 94 EAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISKI 137 (138)
T ss_dssp HHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHhh
Confidence 9999999999 99999999889999999999999988654
No 25
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.71 E-value=8.8e-18 Score=109.54 Aligned_cols=98 Identities=13% Similarity=0.067 Sum_probs=79.1
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++++++|+++.+|+....... ...++. |.++++++.+++++.+
T Consensus 63 ~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~----~~~~v~------------------~~~~~~~v~~~~~l~~ 120 (173)
T 3ocm_A 63 QLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE----GRVRRN------------------RLRDPIIVHESIGILR 120 (173)
T ss_dssp HHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH----SSCCGG------------------GSBCCCEECGGGCHHH
T ss_pred HHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC----CcchhH------------------hcCCCeEECCCCcHHH
Confidence 467889999999998733999999999996432111 001111 3357899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
|+.+|.+++.+.+||+|++|+++|+||+.||++.+...+.
T Consensus 121 al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~ 160 (173)
T 3ocm_A 121 LMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFP 160 (173)
T ss_dssp HHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCC
Confidence 9999999999999999999999999999999999987554
No 26
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.71 E-value=7.7e-18 Score=104.70 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=79.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+| ++ +++|++|.+|+........ ....++. .+|.+++.++.+++++.+
T Consensus 29 ~~~~~~~~~~~Vvd-~~-~~~Givt~~dl~~~~~~~~--~~~~~v~----------------~~~~~~~~~v~~~~~l~~ 88 (133)
T 2ef7_A 29 VMTEKNIGSVIVVD-GN-KPVGIITERDIVKAIGKGK--SLETKAE----------------EFMTASLITIREDSPITG 88 (133)
T ss_dssp HHHHHTCSEEEEEE-TT-EEEEEEEHHHHHHHHHTTC--CTTCBGG----------------GTSEECCCCEETTSBHHH
T ss_pred HHHhcCCCEEEEEE-CC-EEEEEEcHHHHHHHHhcCC--CcccCHH----------------HHcCCCCEEECCCCCHHH
Confidence 35677899999999 66 9999999999953311110 0011222 266678899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
+++.|.+++.+.+||+|++|+++|+||+.|+++.+.+...
T Consensus 89 ~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~ 128 (133)
T 2ef7_A 89 ALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFE 128 (133)
T ss_dssp HHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHH
Confidence 9999999999999999988999999999999999877654
No 27
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.71 E-value=9.4e-18 Score=107.07 Aligned_cols=101 Identities=12% Similarity=0.227 Sum_probs=78.7
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHH---HhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCC
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVL---QTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSP 79 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~ 79 (126)
.|.+++++.+||+|+++ +++|++|.+|+........ ..+...++. ++|.+++.++.++++
T Consensus 42 ~m~~~~~~~~~Vvd~~~-~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~----------------~~m~~~~~~v~~~~~ 104 (156)
T 3ctu_A 42 LLSQMTYTRVPVVTDEK-QFVGTIGLRDIMAYQMEHDLSQEIMADTDIV----------------HMTKTDVAVVSPDFT 104 (156)
T ss_dssp HHTTCSSSEEEEECC-C-BEEEEEEHHHHHHHHHHHTCCHHHHTTSBGG----------------GGCBCSCCCBCSSCC
T ss_pred HHHHCCCceEeEECCCC-EEEEEEcHHHHHHHHHhccccccccccCcHH----------------HhccCCceeeCCCCc
Confidence 46789999999999887 9999999999964422110 000111222 266778899999999
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 80 LSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 80 l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
+.+|+..|.+++ .+||+|++|+++|+||+.|+++.+.+.+.
T Consensus 105 l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~ 145 (156)
T 3ctu_A 105 ITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp HHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSC
T ss_pred HHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHH
Confidence 999999999886 79999989999999999999999877654
No 28
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.70 E-value=7.2e-17 Score=112.74 Aligned_cols=94 Identities=19% Similarity=0.234 Sum_probs=80.4
Q ss_pred CCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHHHHHH
Q 039385 8 NVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEVIGKA 87 (126)
Q Consensus 8 ~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m 87 (126)
+++.+||+|+++ +++|++|.+|+.... ...++.++ |.++++++++++++.+|+..|
T Consensus 172 ~~~~~pVvd~~~-~lvGivt~~dll~~~-------~~~~v~~i----------------m~~~~~~v~~~~~l~ea~~~m 227 (286)
T 2oux_A 172 TIYYVYVVDQEN-HLVGVISLRDLIVND-------DDTLIADI----------------LNERVISVHVGDDQEDVAQTI 227 (286)
T ss_dssp CCSEEEEECTTC-BEEEEEEHHHHTTSC-------TTSBHHHH----------------SBSCCCCEETTSBHHHHHHHH
T ss_pred ceeEEEEEcCCC-eEEEEEEHHHHHcCC-------CCCcHHHH----------------cCCCCeeecCCCCHHHHHHHH
Confidence 788899999887 999999999996542 12356664 456889999999999999999
Q ss_pred HhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhhhc
Q 039385 88 LTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILADF 125 (126)
Q Consensus 88 ~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~~~ 125 (126)
.+++.+.+||+|++|+++|+||..|+++.+.+...+|+
T Consensus 228 ~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~~ed~ 265 (286)
T 2oux_A 228 RDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEAASDY 265 (286)
T ss_dssp HHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHHHC--
T ss_pred HHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999988877665
No 29
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.70 E-value=1.2e-17 Score=104.07 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=77.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeecccccc-CcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRG-CHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+| ++ +++|++|.+|+.. +..... .....++.+ +|.+++.++.+++++.
T Consensus 34 ~~~~~~~~~~~Vvd-~~-~~~Givt~~dl~~~~~~~~~-~~~~~~v~~----------------~m~~~~~~v~~~~~l~ 94 (135)
T 2rc3_A 34 KMAADNIGALLVMK-DE-KLVGILTERDFSRKSYLLDK-PVKDTQVKE----------------IMTRQVAYVDLNNTNE 94 (135)
T ss_dssp HHHHHTCSEEEEEE-TT-EEEEEEEHHHHHHHGGGSSS-CGGGSBGGG----------------TSBCSCCCBCTTCBHH
T ss_pred HHHhcCCCEEEEEE-CC-EEEEEEehHHHHHHHHHcCC-CcccCCHHH----------------hccCCCeEECCCCcHH
Confidence 35677899999998 66 9999999999963 321110 011223333 5677889999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
+|++.|.+++.+.+||+| +|+++|+||..|+++.+.+.
T Consensus 95 ~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 95 DCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp HHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred HHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 999999999999999999 79999999999999988654
No 30
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.70 E-value=7.7e-17 Score=108.14 Aligned_cols=94 Identities=16% Similarity=0.171 Sum_probs=79.7
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|++|.+|+..... ..++. ++|.+++.++.+++++.+
T Consensus 38 ~m~~~~~~~~pVvd~~~-~l~Givt~~dl~~~~~-------~~~v~----------------~im~~~~~~v~~~~~l~~ 93 (213)
T 1vr9_A 38 RMRQYQTNECIVKDREG-HFRGVVNKEDLLDLDL-------DSSVF----------------NKVSLPDFFVHEEDNITH 93 (213)
T ss_dssp HHHHTTSSEEEEECTTS-BEEEEEEGGGGTTSCT-------TSBSG----------------GGCBCTTCCEETTSBHHH
T ss_pred HHHHCCCCEEEEEcCCC-EEEEEEEHHHHHhhcC-------CCcHH----------------HHccCCCEEECCCCcHHH
Confidence 36678999999999877 9999999999975431 11222 266778899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
|++.|.+++++.+||+|++|+++|+||..|+++.+...
T Consensus 94 a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 94 ALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp HHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHS
T ss_pred HHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 99999999999999999889999999999999987654
No 31
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.69 E-value=2e-17 Score=105.90 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=79.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHH----HHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCC
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYA----VLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDS 78 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~ 78 (126)
.|.+++++.+||+|+++ +++|++|..|+...... ....+...++.+ +|.+++.++.+++
T Consensus 41 ~m~~~~~~~~pVvd~~~-~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~----------------~m~~~~~~v~~~~ 103 (159)
T 1yav_A 41 VLTKTGYTAIPVLDPSY-RLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE----------------VMLTDIPRLHIND 103 (159)
T ss_dssp HHHHHCCSEEEEECTTC-BEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH----------------HSBCSCCEEETTS
T ss_pred HHHhCCCcEEEEECCCC-CEEEEeEHHHHHHHhhhhcccchhhhccCCHHH----------------hcCCCCceEcCCC
Confidence 35678899999999887 99999999999532111 000112335555 4466889999999
Q ss_pred CHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhh
Q 039385 79 PLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILA 123 (126)
Q Consensus 79 ~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~ 123 (126)
++.+|+..|.++++ +||+|++|+++|+||+.|+++.+.+....
T Consensus 104 ~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 104 PIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp BHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 99999999998876 99999889999999999999998876543
No 32
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.69 E-value=4.8e-17 Score=113.34 Aligned_cols=104 Identities=8% Similarity=0.192 Sum_probs=84.1
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHh-----hhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCC
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQT-----WLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVD 77 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~ 77 (126)
.|.+++++.+||+|+++ +++|++|..|+.......+.. ....++.+ +|.+++.++.++
T Consensus 181 ~m~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~----------------~m~~~~~~v~~~ 243 (296)
T 3ddj_A 181 LMLRRGFRRLPVIDDDN-KVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKD----------------VMVTNLVTIDEL 243 (296)
T ss_dssp HHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHH----------------HSBCCCCBCCTT
T ss_pred HHHHcCCCEEEEEcCCC-EEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHH----------------HhCCCCeEECCC
Confidence 35678899999999888 999999999996442222111 12234444 456788999999
Q ss_pred CCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhh
Q 039385 78 SPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILA 123 (126)
Q Consensus 78 ~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~ 123 (126)
+++.+|+++|.+++.+++||+|++|+++|+||+.||++.+.+....
T Consensus 244 ~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~~~ 289 (296)
T 3ddj_A 244 ASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHILVM 289 (296)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999877653
No 33
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.69 E-value=5.3e-17 Score=99.69 Aligned_cols=97 Identities=19% Similarity=0.247 Sum_probs=77.5
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+| ++ +++|++|.+|+........ .....++.++ |.+++.++.+++++.+
T Consensus 26 ~~~~~~~~~~~Vvd-~~-~~~G~it~~dl~~~~~~~~-~~~~~~v~~~----------------m~~~~~~v~~~~~l~~ 86 (125)
T 1pbj_A 26 NYVENAKGSSVVVK-EG-VRVGIVTTWDVLEAIAEGD-DLAEVKVWEV----------------MERDLVTISPRATIKE 86 (125)
T ss_dssp HHHHHCCCEEEEEE-TT-EEEEEEEHHHHHHHHHHTC-CTTTSBHHHH----------------CBCGGGEECTTSCHHH
T ss_pred HHHHcCCCEEEEEe-CC-eeEEEEeHHHHHHHHhcCC-cccccCHHHH----------------cCCCCeEECCCCCHHH
Confidence 35667899999999 66 9999999999964321110 1123355554 4568899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+++.|.+++.+.+||+|+ |+++|+||..|+++.+..
T Consensus 87 ~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 87 AAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp HHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred HHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 999999999999999997 999999999999998754
No 34
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.69 E-value=9.2e-17 Score=102.89 Aligned_cols=107 Identities=12% Similarity=0.076 Sum_probs=80.8
Q ss_pred cccCCCCceeeEeeC--CCceeEEEeeccccccCcHHHHH---hhhhhcHHHHHHHHhcCCCCCCCccccccc-eEEEeC
Q 039385 3 WYKKPNVERNSISLG--NGWRLIGTFSASDLRGCHYAVLQ---TWLPLTALEFTQQVLTSPLFSESNTTQQRE-LLTCQV 76 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~--~~~~l~G~is~~dl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~-~~~v~~ 76 (126)
.|.+++++++||+|+ ++ +++|++|..|+......... .....++.++|..- .+..+ +.++.+
T Consensus 38 ~~~~~~~~~~pVvd~~~~~-~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~-----------~~~~~~~~~v~~ 105 (164)
T 2pfi_A 38 VVTSTDVTEYPLVESTESQ-ILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARG-----------CPTEPVTLTLFS 105 (164)
T ss_dssp HHHTCCCSEEEEESCTTTC-BEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTT-----------CCCBCCCCCEET
T ss_pred HHHhCCCCceeEEecCCCC-EEEEEEEHHHHHHHHHhhccccCCcccchhhhhhccc-----------ccccCCceEECC
Confidence 467889999999997 55 99999999999643211100 01123566666420 01112 688999
Q ss_pred CCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 77 DSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 77 ~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
++++.+|+..|.+++.+.+||+| +|+++|+||+.|+++.+.+...
T Consensus 106 ~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~~ 150 (164)
T 2pfi_A 106 ETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLTN 150 (164)
T ss_dssp TCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhhC
Confidence 99999999999999999999999 7999999999999999887653
No 35
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.69 E-value=2.6e-17 Score=105.12 Aligned_cols=101 Identities=11% Similarity=0.115 Sum_probs=79.9
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||++ ++ +++|++|.+|+..............++.++ |.+++.++.+++++.+
T Consensus 38 ~~~~~~~~~~~V~~-~~-~~~Givt~~dl~~~~~~~~~~~~~~~v~~~----------------m~~~~~~v~~~~~l~~ 99 (157)
T 4fry_A 38 LMAEKGIGALLVVD-GD-DIAGIVTERDYARKVVLQERSSKATRVEEI----------------MTAKVRYVEPSQSTDE 99 (157)
T ss_dssp HHHHHTCSEEEEES-SS-SEEEEEEHHHHHHHSGGGTCCSSSCBHHHH----------------SBSSCCCBCTTSBHHH
T ss_pred HHHHcCCCEEEEee-CC-EEEEEEEHHHHHHHHHhccCCccccCHHHH----------------cCCCCcEECCCCcHHH
Confidence 35678899999954 56 999999999995431111111123456664 4568899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
|+++|.+++.+.+||+| +|+++|+||+.|+++.+.....
T Consensus 100 ~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~ 138 (157)
T 4fry_A 100 CMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQ 138 (157)
T ss_dssp HHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHH
Confidence 99999999999999999 7999999999999999887654
No 36
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.69 E-value=1.5e-17 Score=106.70 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=80.3
Q ss_pred ccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCcccccc--ceEEEeCCCCHH
Q 039385 4 YKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQR--ELLTCQVDSPLS 81 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~--~~~~v~~~~~l~ 81 (126)
|.+++++.+||+|+++ +++|++|.+|+....... ......++.+ +|.+ ++.++.+++++.
T Consensus 42 m~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~-~~~~~~~v~~----------------~m~~~~~~~~v~~~~~l~ 103 (159)
T 3fv6_A 42 MFLEDVGTLFVVDRDA-VLVGVLSRKDLLRASIGQ-QELTSVPVHI----------------IMTRMPNITVCRREDYVM 103 (159)
T ss_dssp HHHHTCSEEEEECTTS-CEEEEEEHHHHHHHHTSC-SCTTTCBGGG----------------TSEETTSCCCBCTTSBHH
T ss_pred HHHCCCCEEEEEcCCC-cEEEEEeHHHHHHHhhcc-CcccCcCHHH----------------HHcCCCCcEEECCCCCHH
Confidence 5677899999999887 999999999995421000 0011123333 5566 789999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCC---ceEEEEeHHHHHHHHHHhhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQR---LLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~---~lvGivs~~dil~~~~~~~~ 122 (126)
+|+..|.+++++.+||+|++| +++|+||+.||++.+.+...
T Consensus 104 ~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~ 147 (159)
T 3fv6_A 104 DIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSE 147 (159)
T ss_dssp HHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhh
Confidence 999999999999999999888 99999999999999887654
No 37
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.69 E-value=4.3e-17 Score=103.91 Aligned_cols=101 Identities=12% Similarity=0.168 Sum_probs=78.5
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccC-cHHH-H--HhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCC
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGC-HYAV-L--QTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDS 78 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~-~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~ 78 (126)
.|.+++++.+||+|+++ +++|++|.+|+... .... + ..+...++. .+|.+++.++.+++
T Consensus 38 ~m~~~~~~~~pVvd~~~-~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~----------------~~m~~~~~~v~~~~ 100 (157)
T 2emq_A 38 VLTKTGYSAIPVLDTSY-KLHGLISMTMMMDAILGLERIEFERLETMKVE----------------EVMNRNIPRLRLDD 100 (157)
T ss_dssp HHHHSSSSEEEEECTTC-CEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGG----------------GTCBCCCCEEETTS
T ss_pred HHHHCCceEEEEEcCCC-CEEEEeeHHHHHHHHhcccccchHHhcCCcHH----------------HHhCCCCceecCCC
Confidence 35678999999999877 99999999999532 1100 0 001111222 26677899999999
Q ss_pred CHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhh
Q 039385 79 PLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 79 ~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~ 122 (126)
++.+|+..|.++++ +||+|++|+++|+||+.|+++.+.....
T Consensus 101 ~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~ 142 (157)
T 2emq_A 101 SLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLH 142 (157)
T ss_dssp BHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTC
T ss_pred cHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhh
Confidence 99999999999987 9999988999999999999999876543
No 38
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.68 E-value=1.3e-17 Score=109.32 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=78.9
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|++|.+|+..............++.+ +|.+++.++.+++++.+
T Consensus 34 ~~~~~~~~~~pVvd~~g-~~vGivt~~dl~~~~~~~~~~~~~~~v~~----------------im~~~~~~v~~~~~l~~ 96 (184)
T 1pvm_A 34 IMNENHLYGLVVKDDNG-NDVGLLSERSIIKRFIPRNKKPDEVPIRL----------------VMRKPIPKVKSDYDVKD 96 (184)
T ss_dssp HHHHHTCCEEEEECTTS-CEEEEEEHHHHHHHTGGGCCCGGGSBGGG----------------TSBSSCCEEETTCBHHH
T ss_pred HHHHcCCCEEEEEcCCC-cEEEEEeHHHHHHHHhhcccCcccCCHHH----------------HhCCCCcEECCCCCHHH
Confidence 35678899999999877 99999999999542111000011122333 66778899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
|+++|.+++.+.+||+|++|+++|+||+.|+++.+..
T Consensus 97 a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 97 VAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp HHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred HHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 9999999999999999988999999999999987665
No 39
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.68 E-value=2.2e-17 Score=103.17 Aligned_cols=99 Identities=20% Similarity=0.393 Sum_probs=79.3
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccc-cCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLR-GCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+|+++ +++|++|.+|+. .+..... ....++.+ +|.+++.++.+++++.
T Consensus 32 ~~~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~~~--~~~~~v~~----------------~m~~~~~~v~~~~~l~ 92 (138)
T 2yzi_A 32 LMMEFDVGSLVVINDDG-NVVGFFTKSDIIRRVIVPGL--PYDIPVER----------------IMTRNLITANVNTPLG 92 (138)
T ss_dssp HHHHHTCSEEEEECTTS-CEEEEEEHHHHHHHTTTTCC--CTTSBGGG----------------TCBCSCCEEETTSBHH
T ss_pred HHHHcCCCEEEEEcCCC-cEEEEEeHHHHHHHHHhcCC--cccCCHHH----------------HhhCCCeEECCCCcHH
Confidence 35677899999999877 999999999994 3321110 01112222 6677899999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~ 121 (126)
+++..|.+++.+++ |+|++|+++|+||..|+++.+.+..
T Consensus 93 ~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 93 EVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp HHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCS
T ss_pred HHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHH
Confidence 99999999999999 9998899999999999999987654
No 40
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.68 E-value=6e-17 Score=105.70 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=81.1
Q ss_pred cccCCCCceeeEe--eCCCceeEEEeeccccccCcHHHHHhhhhh---cHHHHHHHH----hcCCCCCCCccccccceEE
Q 039385 3 WYKKPNVERNSIS--LGNGWRLIGTFSASDLRGCHYAVLQTWLPL---TALEFTQQV----LTSPLFSESNTTQQRELLT 73 (126)
Q Consensus 3 ~~~~~~~~~~pVv--d~~~~~l~G~is~~dl~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~m~~~~~~ 73 (126)
.|.+++++.+||+ |+++ +++|+||..|+.............. ....+.... ...........+|.+++.+
T Consensus 42 ~~~~~~~~~~pVv~~d~~~-~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~ 120 (185)
T 2j9l_A 42 IISETTYSGFPVVVSRESQ-RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFT 120 (185)
T ss_dssp HHHHCCCSEEEEESCTTTC-BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCE
T ss_pred HHHhcCCCceeEEEECCCC-eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCcccccccccCccHHHhhCcCCeE
Confidence 3567899999999 6666 9999999999964321110000000 000000000 0000011123377778999
Q ss_pred EeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhh
Q 039385 74 CQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILA 123 (126)
Q Consensus 74 v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~ 123 (126)
+.+++++.+|+.+|.+++.+.+||+| +|+++|+||+.|+++.+.+....
T Consensus 121 v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~~~~ 169 (185)
T 2j9l_A 121 VTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQMANQ 169 (185)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHCC-
T ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHhhcc
Confidence 99999999999999999999999999 89999999999999998876543
No 41
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.66 E-value=2.5e-17 Score=104.48 Aligned_cols=94 Identities=20% Similarity=0.286 Sum_probs=75.6
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|+||.+|+....... ..+...++.++ |.+++.++.+++++.+
T Consensus 55 ~m~~~~~~~~~Vvd~~~-~~~Givt~~dl~~~~~~~-~~~~~~~v~~~----------------m~~~~~~v~~~~~l~~ 116 (149)
T 3k2v_A 55 EITRKNLGMTAICDDDM-NIIGIFTDGDLRRVFDTG-VDMRDASIADV----------------MTRGGIRIRPGTLAVD 116 (149)
T ss_dssp HHHHHTSSEEEEECTTC-BEEEEEEHHHHHHHHCSS-SCCTTCBHHHH----------------SEESCCEECTTCBHHH
T ss_pred HHHhCCCcEEEEECCCC-cEEEEecHHHHHHHHhcC-CCcccCcHHHH----------------cCCCCeEECCCCCHHH
Confidence 35678899999999887 999999999996431111 01123456664 4567899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIR 115 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~ 115 (126)
|+..|.+++.+.+||+|++ +++|+||..||++
T Consensus 117 a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 117 ALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp HHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred HHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 9999999999999999965 9999999999975
No 42
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.66 E-value=1.1e-16 Score=102.27 Aligned_cols=113 Identities=13% Similarity=0.149 Sum_probs=77.9
Q ss_pred cccCCCCce-eeEeeCCCceeEEEeeccccccCcHHHHHhhhhhc-HHHHHHHHhcCCCCCCCccccccceEEEeCCCCH
Q 039385 3 WYKKPNVER-NSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLT-ALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPL 80 (126)
Q Consensus 3 ~~~~~~~~~-~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l 80 (126)
.|.+++++. +||+|++ +++|++|.+|+.......+ +.... ...+.......... ...++|.+ +.++.+++++
T Consensus 41 ~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~v~~im~~-~~~v~~~~~l 114 (157)
T 1o50_A 41 RILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHF--FGFIPKEELIRSSMKRLIAK-NASEIMLD-PVYVHMDTPL 114 (157)
T ss_dssp HHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHH--HCCCC-------CCCCCSSC-BHHHHCBC-CCCBCTTSBH
T ss_pred HHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhH--HhhhccHHHHHHHHHHHcCC-cHHHHcCC-CeEECCCCCH
Confidence 356788999 9999864 8999999999964311100 00000 00000000000001 11236677 8999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhh
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~ 121 (126)
.+|+++|.+++++.+||+|++|+++|+||+.|+++.+.+..
T Consensus 115 ~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 115 EEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp HHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 99999999999999999998899999999999999987653
No 43
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.66 E-value=1.9e-16 Score=111.95 Aligned_cols=106 Identities=21% Similarity=0.271 Sum_probs=81.9
Q ss_pred ccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHH
Q 039385 4 YKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEV 83 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~ 83 (126)
|.+++++.+||+|+++ +++|++|.+|+..............++.++|..-. . ..++++++.+++++.+|
T Consensus 211 m~~~~~~~~~Vvd~~~-~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~--~--------~~~~~~~v~~~~~l~~~ 279 (334)
T 2qrd_G 211 LAEKNISAVPIVNSEG-TLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKRP--A--------NFDGVHTCRATDRLDGI 279 (334)
T ss_dssp HHHHTCSEEEEECTTC-BEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTCC--T--------TCCCCCEECTTCBHHHH
T ss_pred HHHcCCcEEEEEcCCC-cEEEEEEHHHHHHHhhccccccccCcHHHHHhccc--c--------cCCCCEEECCCCcHHHH
Confidence 5667899999999887 99999999999543111111123456777663100 0 00378899999999999
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
+++|.+++++++||+|++|+++|+||+.|+++.+...
T Consensus 280 ~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 280 FDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYD 316 (334)
T ss_dssp HHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSC
T ss_pred HHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhc
Confidence 9999999999999999889999999999999988654
No 44
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.66 E-value=9.8e-17 Score=110.82 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=79.4
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHH-HH--------Hh---hh-hhcHHHHHHHH-hcCCCCCCCccccc
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYA-VL--------QT---WL-PLTALEFTQQV-LTSPLFSESNTTQQ 68 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~-~~--------~~---~~-~~~~~~~~~~~-~~~~~~~~~~~~m~ 68 (126)
.|.+++++.+||+|+++ +++|++|..|+...... .. .. +. ......+.... ......+ ..++|.
T Consensus 151 ~~~~~~~~~l~Vvd~~~-~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~im~ 228 (282)
T 2yzq_A 151 ALLLSNSMALPVVDSEG-NLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKP-VAEIMT 228 (282)
T ss_dssp HHHTCSSSEEEEECTTS-CEEEEEEGGGGGGCGGGCC--------------------------------CCCB-GGGTCB
T ss_pred HHHHcCCcEEEEEcCCC-eEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCC-HHHhcC
Confidence 36678899999999877 99999999999732100 00 00 00 00000000000 0111122 234888
Q ss_pred cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 69 RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 69 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++++++.+++++.+|+++|.+++++++||+|++|+++|+||++|+++.+.+
T Consensus 229 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 229 RDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred CCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 899999999999999999999999999999987899999999999987654
No 45
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.66 E-value=1.8e-16 Score=112.05 Aligned_cols=107 Identities=21% Similarity=0.344 Sum_probs=84.4
Q ss_pred ccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHH
Q 039385 4 YKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEV 83 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~ 83 (126)
|.+++++.+||+|+++ +++|++|.+|+..............++.+++.. ...|.++++++.+++++.++
T Consensus 219 m~~~~~~~~~Vvd~~~-~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~----------~~~~~~~~~~v~~~~~l~~a 287 (330)
T 2v8q_E 219 FVQHRVSALPVVDEKG-RVVDIYSKFDVINLAAEKTYNNLDVSVTKALQH----------RSHYFEGVLKCYLHETLEAI 287 (330)
T ss_dssp HHHHCCSEEEEECTTS-BEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGG----------CCSCCCSCCEECTTSBHHHH
T ss_pred HHHcCCCeEEEECCCC-cEEEEEEHHHHHHHHhccccccccCcHHHHHhc----------cccccCCCeEECCCCcHHHH
Confidence 5667899999999877 999999999996543221101123466666531 01345788999999999999
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhh
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~ 121 (126)
+++|.+++++++||+|++|+++|+||..|+++.+.+..
T Consensus 288 ~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~~ 325 (330)
T 2v8q_E 288 INRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLTG 325 (330)
T ss_dssp HHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSSC
T ss_pred HHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhhc
Confidence 99999999999999998899999999999999987654
No 46
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.66 E-value=1.4e-16 Score=110.82 Aligned_cols=94 Identities=22% Similarity=0.258 Sum_probs=74.2
Q ss_pred CCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHHHHHH
Q 039385 8 NVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEVIGKA 87 (126)
Q Consensus 8 ~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m 87 (126)
+++.+||+|+++ +++|++|.+|+.... ...++.+ +|.++++++++++++.+|+..|
T Consensus 170 ~~~~~~Vvd~~~-~lvGivt~~dll~~~-------~~~~v~~----------------im~~~~~~v~~~~~l~~a~~~m 225 (278)
T 2yvy_A 170 TIYYIYVVDEKG-RLKGVLSLRDLIVAD-------PRTRVAE----------------IMNPKVVYVRTDTDQEEVARLM 225 (278)
T ss_dssp CSSEEEEECTTC-BEEEEEEHHHHHHSC-------TTCBSTT----------------TSBSSCCCEETTSBHHHHHHHH
T ss_pred ceeEEEEECCCC-CEEEEEEHHHHhcCC-------CCCcHHH----------------HhCCCCeEEeCCCCHHHHHHHH
Confidence 789999999887 999999999995331 0112222 6677899999999999999999
Q ss_pred HhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhhhc
Q 039385 88 LTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILADF 125 (126)
Q Consensus 88 ~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~~~ 125 (126)
.+++.+.+||+|++|+++|+||..|+++.+.+...+|+
T Consensus 226 ~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~~ed~ 263 (278)
T 2yvy_A 226 ADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDI 263 (278)
T ss_dssp HHHTCSEEEEECTTSBEEEEEEHHHHHHHC--------
T ss_pred HhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999877766554
No 47
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.65 E-value=4.9e-16 Score=106.75 Aligned_cols=55 Identities=15% Similarity=0.176 Sum_probs=50.3
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhh
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~ 121 (126)
+|.+.++++.+++|+.+|..+|...+++++||++ +|+++||||+.||++++...+
T Consensus 194 ~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~~~ 248 (250)
T 2d4z_A 194 RIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEGSY 248 (250)
T ss_dssp CEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC--
T ss_pred cccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHHHh
Confidence 6788999999999999999999999999999998 799999999999999987543
No 48
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.64 E-value=8.8e-17 Score=100.93 Aligned_cols=98 Identities=18% Similarity=0.160 Sum_probs=76.0
Q ss_pred cccCCCCceeeEeeCCC-ceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISLGNG-WRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~-~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+|+++ ++++|++|.+|+........ ....++ .++|.+++.++.++ ++.
T Consensus 30 ~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~--~~~~~v----------------~~~m~~~~~~v~~~-~l~ 90 (141)
T 2rih_A 30 ELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL--DLDGPA----------------MPIANSPITVLDTD-PVH 90 (141)
T ss_dssp HHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC--CTTSBS----------------GGGCBCCCEEETTS-BHH
T ss_pred HHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC--CCCCCH----------------HHHcCCCCeEEcCC-CHH
Confidence 35677899999998642 28999999999953311100 001112 23677789999999 999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+|+++|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 91 ~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 91 VAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp HHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred HHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 99999999999999999988999999999999877644
No 49
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.63 E-value=2.6e-16 Score=107.33 Aligned_cols=54 Identities=13% Similarity=0.176 Sum_probs=44.7
Q ss_pred cccc-cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 65 TTQQ-RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 65 ~~m~-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
++|+ +++.++.+++++.+|+++|.+++++++||+|++|+++|+||++|+++...
T Consensus 189 ~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~~ 243 (245)
T 3l2b_A 189 YVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHK 243 (245)
T ss_dssp HHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-------
T ss_pred eEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchhh
Confidence 3777 89999999999999999999999999999999999999999999998754
No 50
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.61 E-value=4.3e-16 Score=107.32 Aligned_cols=97 Identities=16% Similarity=0.290 Sum_probs=76.2
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccC-cHHH-HHh--------hhhhcHHHHHHHHhcCCCCCCCccccccceE
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGC-HYAV-LQT--------WLPLTALEFTQQVLTSPLFSESNTTQQRELL 72 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~-~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~ 72 (126)
.|.+++++.+||+ +++ +++|++|.+|+... .... ... ....++.+ +|.+++.
T Consensus 173 ~~~~~~~~~~~Vv-~~~-~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~----------------~m~~~~~ 234 (280)
T 3kh5_A 173 TMVRNGFRRLPVV-SEG-RLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEE----------------IMKRDVI 234 (280)
T ss_dssp HHHHHTCSEEEEE-ETT-EEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHH----------------HSBSSCC
T ss_pred HHHHcCCCEEEEE-ECC-EEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHH----------------HhcCCCE
Confidence 3567889999999 566 99999999999543 1111 100 01223333 5567889
Q ss_pred EEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 73 TCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 73 ~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
++.+++++.+|++.|.+++++++||+|++|+++|+||++||++.+
T Consensus 235 ~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 235 TAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp CBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred EECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 999999999999999999999999999889999999999998765
No 51
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.60 E-value=2.2e-15 Score=104.91 Aligned_cols=96 Identities=15% Similarity=0.167 Sum_probs=80.4
Q ss_pred ccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHH
Q 039385 4 YKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEV 83 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~ 83 (126)
|.+++++.+||+|+++ +++|++|.+|+....... ....++.++ |.+++.++.+++++.++
T Consensus 119 m~~~~~~~lpVvd~~~-~lvGivt~~dl~~~~~~~---~~~~~v~~~----------------m~~~~~~v~~~~~l~~~ 178 (296)
T 3ddj_A 119 MVTRNFGSLPVVDIND-KPVGIVTEREFLLLYKDL---DEIFPVKVF----------------MSTKVQTIYKEVRLDQA 178 (296)
T ss_dssp HHHHTCSEEEEECTTS-CEEEEEEHHHHGGGGGGS---CCCCBHHHH----------------SBCSCCCEETTSBHHHH
T ss_pred HHHcCCCEEEEEcCCC-cEEEEEeHHHHHHhhhcc---cccccHHHh----------------hcCCCeEECCCCCHHHH
Confidence 5678899999999887 999999999996542221 112355554 45688999999999999
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 179 ~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 214 (296)
T 3ddj_A 179 VKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAK 214 (296)
T ss_dssp HHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 999999999999999999999999999999998874
No 52
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.59 E-value=2e-16 Score=120.79 Aligned_cols=118 Identities=16% Similarity=0.106 Sum_probs=78.2
Q ss_pred cc-CCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhh----------hhcHHHHHHHHhcC---------------
Q 039385 4 YK-KPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWL----------PLTALEFTQQVLTS--------------- 57 (126)
Q Consensus 4 ~~-~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~----------~~~~~~~~~~~~~~--------------- 57 (126)
|. +++++.+||+|+++ +++|++|.+|+.........+.. ..+..++.+.+...
T Consensus 481 ~~~~~~~~~~PVvd~~~-~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~ 559 (632)
T 3org_A 481 LEKFPNRLVFPVIDANG-YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKR 559 (632)
T ss_dssp HHHSTTCCEECBBCTTC-BBCCEESHHHHTTTTTTC--------------------------------------------
T ss_pred HHhcCCcceEEEEecCC-eEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhcccCCCCCcccchhhhccc
Confidence 55 78999999999877 99999999999654211100000 00001111111000
Q ss_pred -----CCCCCCccccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhh
Q 039385 58 -----PLFSESNTTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILA 123 (126)
Q Consensus 58 -----~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~ 123 (126)
.......++|+++++++++++++.++++.|.+++++++||+ ++|+++|+||++|+++.+.+....
T Consensus 560 ~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~~~~~~~ 629 (632)
T 3org_A 560 TATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGYSNSLEV 629 (632)
T ss_dssp -----------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECCCC----
T ss_pred ceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHHhhhHHH
Confidence 00001234899999999999999999999999999999999 589999999999999877665543
No 53
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.58 E-value=2.9e-15 Score=111.07 Aligned_cols=94 Identities=22% Similarity=0.252 Sum_probs=78.8
Q ss_pred CCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHHHHH
Q 039385 7 PNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEVIGK 86 (126)
Q Consensus 7 ~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~ 86 (126)
.+++.+||+|+++ +++|++|.+|+.... ...++.+ +|.+++.++++++++.++++.
T Consensus 189 ~~~~~ipVvd~~~-~lvGiVt~~Dll~~~-------~~~~v~d----------------im~~~~~~v~~~~~l~ea~~~ 244 (473)
T 2zy9_A 189 ETIYYIYVVDEKG-RLKGVLSLRDLIVAD-------PRTRVAE----------------IMNPKVVYVRTDTDQEEVARL 244 (473)
T ss_dssp SEEEEEEEECTTS-BEEEEEEHHHHHHSC-------TTSBGGG----------------TSBSSCCCEESSSBHHHHHHH
T ss_pred CceeEEEEECCCC-cEEEEEEHHHHhcCC-------CCCcHHH----------------HhCCCCeEEeCCCcHHHHHHH
Confidence 4689999999887 999999999996321 1113333 666789999999999999999
Q ss_pred HHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhhhhh
Q 039385 87 ALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSILAD 124 (126)
Q Consensus 87 m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~~~~ 124 (126)
|.+++.+.+||+|++|+++|+||..|+++.+.....+|
T Consensus 245 m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e~~ed 282 (473)
T 2zy9_A 245 MADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATED 282 (473)
T ss_dssp HHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHHhhhh
Confidence 99999999999999999999999999999987765443
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.57 E-value=3.7e-15 Score=102.60 Aligned_cols=112 Identities=16% Similarity=0.216 Sum_probs=80.7
Q ss_pred ccCCCCceeeEeeCCCceeEEEeeccccccCcHHHH-Hhhh-hhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 4 YKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVL-QTWL-PLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
|.+++++++||+|+++++++|++|.+|+........ ..+. ......+.... ..+ ..++|.+++.++.+++++.
T Consensus 30 m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-v~~im~~~~~~v~~~~~~~ 104 (280)
T 3kh5_A 30 MNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAI----NEP-VREIMEENVITLKENADID 104 (280)
T ss_dssp HHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHT----TSB-GGGTSBCSCCCEETTCBHH
T ss_pred HHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHh----hhh-HHHhcCCCCEEECCCCCHH
Confidence 567899999999973339999999999954321110 0000 00000111100 111 2347888999999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
+|++.|.+++.+++||+|++|+++|++|..|+++.+...
T Consensus 105 ~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 143 (280)
T 3kh5_A 105 EAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDK 143 (280)
T ss_dssp HHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG
T ss_pred HHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc
Confidence 999999999999999999999999999999999987654
No 55
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.55 E-value=1.6e-14 Score=102.00 Aligned_cols=108 Identities=11% Similarity=0.163 Sum_probs=83.1
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHH-------hhhhhcHHHHHHHHhcCCCCCCCccccccceEEEe
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQ-------TWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQ 75 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~ 75 (126)
.|.+++++++||+|+++++++|++|.+|+......... .+...+...+...+. .+|.+++.++.
T Consensus 62 ~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~im~~~~~~v~ 132 (330)
T 2v8q_E 62 ALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYL---------QDSFKPLVCIS 132 (330)
T ss_dssp HHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHS---------SSSCCCCCCBC
T ss_pred HHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHh---------hcccCCceEeC
Confidence 35678999999999884499999999999643211110 011223444433222 26778899999
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEEcC-CCceEEEEeHHHHHHHHHH
Q 039385 76 VDSPLSEVIGKALTKHVHRVWVVDQ-QRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 76 ~~~~l~~~~~~m~~~~~~~lpVvd~-~~~lvGivs~~dil~~~~~ 119 (126)
+++++.+|++.|.+++.+.+||+|+ +|+++|+||..|+++.+..
T Consensus 133 ~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~ 177 (330)
T 2v8q_E 133 PNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKL 177 (330)
T ss_dssp TTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHH
Confidence 9999999999999999999999998 8999999999999998754
No 56
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.54 E-value=2.4e-14 Score=98.77 Aligned_cols=92 Identities=21% Similarity=0.270 Sum_probs=70.0
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.|.+++++.+||+|+++ +++|+++..|+..... ..++. ++|.+++.++.+++++.+
T Consensus 26 ~~~~~~~~~~pV~d~~~-~~~Giv~~~dl~~~~~-------~~~v~----------------~~m~~~~~~v~~~~~l~~ 81 (282)
T 2yzq_A 26 LFKKYKVRSFPVVNKEG-KLVGIISVKRILVNPD-------EEQLA----------------MLVKRDVPVVKENDTLKK 81 (282)
T ss_dssp ------CCEEEEECTTC-CEEEEEESSCC---------------------------------CCCBSCCCEEETTSBHHH
T ss_pred HHHHcCCCeEEEEcCCC-cEEEEEEHHHHHhhhc-------cCCHH----------------HHcCCCCcEECCCCcHHH
Confidence 46788999999999877 9999999999963311 11222 256667899999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHH-HHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIR-VLR 118 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~-~~~ 118 (126)
+++.|.+++.+.+||+|++|+++|++|..|+++ .+.
T Consensus 82 a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 82 AAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp HHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTT
T ss_pred HHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHh
Confidence 999999999999999998899999999999998 654
No 57
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.53 E-value=5.4e-15 Score=104.05 Aligned_cols=104 Identities=13% Similarity=0.241 Sum_probs=80.0
Q ss_pred ccCCCCceeeEeeCCCce-----eEEEeeccccccCcHHHH--HhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeC
Q 039385 4 YKKPNVERNSISLGNGWR-----LIGTFSASDLRGCHYAVL--QTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQV 76 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~-----l~G~is~~dl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~ 76 (126)
|.+++++.+||+|+++ . ++|++|.+|+........ ..+...++.+++ ..|.+++.++.+
T Consensus 140 m~~~~~~~lpVvd~~~-~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~-------------~~m~~~~~~v~~ 205 (323)
T 3t4n_C 140 MLESRSGRIPLIDQDE-ETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLN-------------IITQDNMKSCQM 205 (323)
T ss_dssp HHHHTCSEEEEEEECT-TTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTT-------------CSBCTTCCCBCT
T ss_pred HHhCCeeEEEEEecCC-CCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcC-------------CCCCCCcEEECC
Confidence 5678899999999876 4 999999999964322111 111111222210 126678999999
Q ss_pred CCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHhh
Q 039385 77 DSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 77 ~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~~ 121 (126)
++++.+|++.|.+++++.+||+|++|+++|+||..|+++.+....
T Consensus 206 ~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~ 250 (323)
T 3t4n_C 206 TTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI 250 (323)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTH
T ss_pred CCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhch
Confidence 999999999999999999999999999999999999999876543
No 58
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.53 E-value=2e-14 Score=107.45 Aligned_cols=94 Identities=19% Similarity=0.309 Sum_probs=79.9
Q ss_pred cccCCCCceeeEeeC--CCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCcccccc-ceEEEeCCCC
Q 039385 3 WYKKPNVERNSISLG--NGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQR-ELLTCQVDSP 79 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~--~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~-~~~~v~~~~~ 79 (126)
.+.+++++.+||+|+ ++ +++|++|.+|++... ....++.++| ++ ++++++++++
T Consensus 138 ~m~~~~~s~~pVvd~g~~~-~lvGiVt~rDl~~~~------~~~~~V~~vM----------------~~~~~vtv~~~~~ 194 (511)
T 3usb_A 138 LMGKYRISGVPVVNNLDER-KLVGIITNRDMRFIQ------DYSIKISDVM----------------TKEQLITAPVGTT 194 (511)
T ss_dssp HHHHHCCSEEEEESCTTTC-BEEEEEEHHHHTTCC------CSSSBHHHHC----------------CCCCCCCEETTCC
T ss_pred HHHHcCCcEEEEEecCCCC-EEEEEEEehHhhhhc------cCCCcHHHhc----------------ccCCCEEECCCCC
Confidence 356788999999997 66 999999999996421 1234666644 55 8899999999
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 80 LSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 80 l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+.+++++|.+++++.+||+|++|+++|+||+.|+++.+..
T Consensus 195 l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 195 LSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 9999999999999999999999999999999999998754
No 59
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.47 E-value=3.9e-15 Score=111.11 Aligned_cols=95 Identities=18% Similarity=0.138 Sum_probs=0.0
Q ss_pred cccCCCCceeeEeeCC---CceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccc--eEEEeCC
Q 039385 3 WYKKPNVERNSISLGN---GWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRE--LLTCQVD 77 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~---~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~--~~~v~~~ 77 (126)
.|.+++++.+||+|++ + +++|+||.+|++.. . .....++.++| +++ +++++++
T Consensus 122 ~m~~~~~s~~pVvd~~~~~g-~lvGiVt~~Dl~~~-~----~~~~~~V~diM----------------~~~~~~~tv~~~ 179 (503)
T 1me8_A 122 ISQRTTHNTVAVTDDGTPHG-VLLGLVTQRDYPID-L----TQTETKVSDMM----------------TPFSKLVTAHQD 179 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHcCceEEEEEECCCcCC-eEEEEEEHHHHHhh-h----ccccCcHHHHh----------------CCCCCCEEEcCC
Confidence 4678899999999986 6 99999999999743 1 11223455544 445 8999999
Q ss_pred CCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 78 SPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 78 ~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+++.+++++|.+++++.+||+|++|+++|+||+.||++.+..
T Consensus 180 ~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 180 TKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp ------------------------------------------
T ss_pred CcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc
Confidence 999999999999999999999999999999999999998754
No 60
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.47 E-value=2e-14 Score=107.76 Aligned_cols=99 Identities=12% Similarity=0.131 Sum_probs=76.6
Q ss_pred cccCCCCceeeEee-CCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHH
Q 039385 3 WYKKPNVERNSISL-GNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLS 81 (126)
Q Consensus 3 ~~~~~~~~~~pVvd-~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~ 81 (126)
.|.+++++.+||+| +++ +++|+||.+||........ .....++.+ +|.++++++.+++++.
T Consensus 410 ~m~~~~~~~lpVvd~~~g-~lvGiVt~~Dll~~l~~~~-~~~~~~V~~----------------im~~~~~~v~~~~~l~ 471 (527)
T 3pc3_A 410 LMKKHRVDQLPVVDQDDG-SVLGVVGQETLITQIVSMN-RQQSDPAIK----------------ALNKRVIRLNESEILG 471 (527)
T ss_dssp HHHHHTCSEEEEECTTTC-CEEEEEEHHHHHHHHHHHC-CCTTSBGGG----------------GEETTCCEEETTSBHH
T ss_pred HHHHcCCCeEEEEECCCC-EEEEEEEHHHHHHHHHhcc-CcCCCcHHH----------------HhcCCCeEECCCCcHH
Confidence 46778999999999 666 9999999999953311110 001122333 6777999999999999
Q ss_pred HHHHHHHhcCCCEEEEEcCC----CceEEEEeHHHHHHHHHHhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQ----RLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~----~~lvGivs~~dil~~~~~~~ 121 (126)
+++++|.++++ +||+|++ |+++|+||+.||++.+.+..
T Consensus 472 ~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 472 KLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp HHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred HHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 99999977664 7999974 89999999999999998754
No 61
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.43 E-value=1.1e-14 Score=108.29 Aligned_cols=92 Identities=23% Similarity=0.331 Sum_probs=0.0
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccc-c-ceEEEeCCCCH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQ-R-ELLTCQVDSPL 80 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~-~-~~~~v~~~~~l 80 (126)
.|.+++++.+||+| ++ +++|++|.+|++.... ...++.++| + + +++++++++++
T Consensus 113 ~m~~~~~s~~pVvd-~g-~lvGIVt~rDl~~~~~------~~~~V~~vM----------------tp~~~~vtv~~~~~l 168 (490)
T 4avf_A 113 MAREYGFSGFPVVE-QG-ELVGIVTGRDLRVKPN------AGDTVAAIM----------------TPKDKLVTAREGTPL 168 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhCCCEEEEEE-CC-EEEEEEEhHHhhhccc------cCCcHHHHh----------------ccCCCCEEECCCCcH
Confidence 56788999999999 66 9999999999963211 123555654 4 2 68999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
.+++++|.+++++.+||+|++|+++|+||+.|+++...
T Consensus 169 ~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 169 EEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 99999999999999999999999999999999999753
No 62
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.42 E-value=8.1e-13 Score=98.30 Aligned_cols=93 Identities=18% Similarity=0.257 Sum_probs=77.6
Q ss_pred ccCCCCceeeEee--CCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCcccccc-ceEEEeCCCCH
Q 039385 4 YKKPNVERNSISL--GNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQR-ELLTCQVDSPL 80 (126)
Q Consensus 4 ~~~~~~~~~pVvd--~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~-~~~~v~~~~~l 80 (126)
|.+++++.+||+| +++ +++|++|.+|+..... ...++. ++|++ +++++++++++
T Consensus 116 m~~~~~~~~pVvd~~~~~-~lvGivt~~Dl~~~~~------~~~~v~----------------~im~~~~~~~v~~~~~l 172 (491)
T 1zfj_A 116 MQRYRISGVPIVETLANR-KLVGIITNRDMRFISD------YNAPIS----------------EHMTSEHLVTAAVGTDL 172 (491)
T ss_dssp HHHTTCSEEEEESCTTTC-BEEEEEEHHHHHHCSC------SSSBTT----------------TSCCCSCCCCEETTCCH
T ss_pred HHHcCCCEEEEEEeCCCC-EEEEEEEHHHHhhhcc------CCCcHH----------------HHcCCCCCEEECCCCCH
Confidence 5567899999999 666 9999999999963310 111222 26676 88999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
.++++.|.+++++.+||+|++|+++|+||+.|+++.+..
T Consensus 173 ~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 173 ETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp HHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 999999999999999999999999999999999998874
No 63
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.42 E-value=3.1e-13 Score=95.43 Aligned_cols=107 Identities=7% Similarity=0.057 Sum_probs=78.2
Q ss_pred ccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHH---------hhhhhcHHHHHHHHhcCCCCCCCccccccce--E
Q 039385 4 YKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQ---------TWLPLTALEFTQQVLTSPLFSESNTTQQREL--L 72 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~--~ 72 (126)
+.+++++++||+|++.++++|+++.+|+......... .....+...+...+. .+|.+++ +
T Consensus 50 ~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~im~~~~~~~ 120 (334)
T 2qrd_G 50 LTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVER---------KIGAIPPETI 120 (334)
T ss_dssp HHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHH---------HHTCSCSSCC
T ss_pred HHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHH---------hhccCCCcee
Confidence 4578899999999873499999999999643211100 001223333322111 1455566 8
Q ss_pred EEeCCCCHHHHHHHHHhcCCCEEEEEcCCCc-----eEEEEeHHHHHHHHHH
Q 039385 73 TCQVDSPLSEVIGKALTKHVHRVWVVDQQRL-----LLGLVSLTDMIRVLRT 119 (126)
Q Consensus 73 ~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~-----lvGivs~~dil~~~~~ 119 (126)
++.+++++.++++.|.+++.+++||+|+++. ++|+||..|+++.+..
T Consensus 121 ~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~ 172 (334)
T 2qrd_G 121 YVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISM 172 (334)
T ss_dssp CBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHH
T ss_pred eeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHh
Confidence 9999999999999999999999999997654 9999999999998764
No 64
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.42 E-value=1.7e-14 Score=107.52 Aligned_cols=92 Identities=18% Similarity=0.227 Sum_probs=65.8
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccc-c-ceEEEeCCCCH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQ-R-ELLTCQVDSPL 80 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~-~-~~~~v~~~~~l 80 (126)
.+.+++++.+||+|+++ +++|++|.+|++.... ...++.+ +|+ + +++++++++++
T Consensus 114 ~m~~~~~s~~PVvd~~~-~lvGiVt~rDL~~~~~------~~~~v~d----------------iM~p~~~~vtv~~~~~l 170 (496)
T 4fxs_A 114 LTHYHGFAGFPVVTENN-ELVGIITGRDVRFVTD------LTKSVAA----------------VMTPKERLATVKEGATG 170 (496)
T ss_dssp HHTSSCCCEEEEECSSS-BEEEEEEHHHHTTCCC------TTSBGGG----------------TSEEGGGCCEEECC---
T ss_pred HHHHcCCcEEEEEccCC-EEEEEEEHHHHhhccc------CCCcHHH----------------HhcCCCCCEEECCCCCH
Confidence 46788999999999877 9999999999973311 1223334 455 3 58999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
.+++++|.+++++.+||+|++|+++|+||+.|+++..
T Consensus 171 ~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 171 AEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp -CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred HHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 9999999999999999999999999999999999864
No 65
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.41 E-value=1.8e-14 Score=107.27 Aligned_cols=95 Identities=17% Similarity=0.292 Sum_probs=6.0
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCcccccc--ceEEEeCCCCH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQR--ELLTCQVDSPL 80 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~--~~~~v~~~~~l 80 (126)
.|.+++++.+||+|+++ +++|+||.+|++... . ...++.++ |++ ++.++.+++++
T Consensus 120 ~m~~~~~~~~pVvd~~~-~lvGivt~~Dl~~~~--~----~~~~v~~i----------------m~~~~~~~~v~~~~~l 176 (494)
T 1vrd_A 120 LMAEYKIGGLPVVDEEG-RLVGLLTNRDVRFEK--N----LSKKIKDL----------------MTPREKLIVAPPDISL 176 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHcCceEEEEEcCCC-EEEEEEEHHHHHhhc--C----CCCcHHHH----------------hCCCCCCeEECCCCCH
Confidence 46788999999999877 999999999997421 1 12244444 455 78999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
.+++++|.+++++.+||+|++|+++|+||+.|+++.+...
T Consensus 177 ~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 177 EKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp --------------------------------CHHHHTCT
T ss_pred HHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 9999999999999999999999999999999999987643
No 66
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.40 E-value=2.3e-14 Score=106.28 Aligned_cols=92 Identities=15% Similarity=0.106 Sum_probs=0.0
Q ss_pred cccCCCCceeeEeeCC--CceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCH
Q 039385 3 WYKKPNVERNSISLGN--GWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPL 80 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~--~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l 80 (126)
.+.+++++.+||+|+. +++|+|++|.+|++.. . ...++.++| ++++++++++.++
T Consensus 163 l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~---d----~~~~V~evM----------------T~~lvt~~~~~~l 219 (556)
T 4af0_A 163 IKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ---D----AETPIKSVM----------------TTEVVTGSSPITL 219 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhCCCccccccccCcCCEEEEEEeccccccc---c----cceEhhhhc----------------ccceEEecCCCCH
Confidence 5678999999999873 2499999999999752 1 123566654 5688999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
++|.++|.++++..+||||++++++|+||+.|+++.-
T Consensus 220 eeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 220 EKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------
T ss_pred HHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 9999999999999999999999999999999998764
No 67
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.27 E-value=1.6e-11 Score=68.55 Aligned_cols=47 Identities=15% Similarity=0.201 Sum_probs=43.6
Q ss_pred eEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 71 LLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 71 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
++++.+++++.+|+++|.++++..+||+| +|+++|++|..|+++.+.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 57899999999999999999999999998 689999999999987653
No 68
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.27 E-value=1.5e-11 Score=79.61 Aligned_cols=98 Identities=10% Similarity=0.112 Sum_probs=52.0
Q ss_pred eeEEEeeccccccCcHHH-HHhhhhhcHHHHHHHHhcCCCCCCCccccc--cceEEEeCCCCHHHHHHHHHhcCCCEEEE
Q 039385 21 RLIGTFSASDLRGCHYAV-LQTWLPLTALEFTQQVLTSPLFSESNTTQQ--RELLTCQVDSPLSEVIGKALTKHVHRVWV 97 (126)
Q Consensus 21 ~l~G~is~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpV 97 (126)
++-+.+|..+|+.+.... ........-.+++..+......++++ +|+ .++.++.+++++.+|++.|.++++..+||
T Consensus 2 ~~~~~~t~~el~~l~~~~~~~g~l~~~e~~~i~~~~~l~~~~v~d-iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pV 80 (172)
T 3lhh_A 2 HLDDNVTQEDIQAMLQEGSSAGVIEHNEHAMVKNVFRLDERTISS-LMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPV 80 (172)
T ss_dssp -----------------------------------------CTTT-TSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEE
T ss_pred CccccCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCCCHHH-hCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence 566778888886653221 11111222334444444444455544 777 67899999999999999999999999999
Q ss_pred EcCC-CceEEEEeHHHHHHHHHH
Q 039385 98 VDQQ-RLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 98 vd~~-~~lvGivs~~dil~~~~~ 119 (126)
+|++ ++++|+||..|+++.+..
T Consensus 81 vd~~~~~lvGivt~~dl~~~~~~ 103 (172)
T 3lhh_A 81 CRNNVDDMVGIISAKQLLSESIA 103 (172)
T ss_dssp ESSSTTSEEEEEEHHHHHHHHHT
T ss_pred EeCCCCeEEEEEEHHHHHHHHhh
Confidence 9987 899999999999998763
No 69
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.26 E-value=1.1e-13 Score=103.55 Aligned_cols=96 Identities=15% Similarity=0.096 Sum_probs=57.8
Q ss_pred cccCCCCceeeEeeCC--CceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCcccccc--ceEEEeCCC
Q 039385 3 WYKKPNVERNSISLGN--GWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQR--ELLTCQVDS 78 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~--~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~--~~~~v~~~~ 78 (126)
.|.+++++.+||+|++ +++++|++|.+|+...... ....++.+ +|.+ ++.++.+++
T Consensus 133 ~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~----~~~~~v~~----------------vm~~~~~~~tv~~~~ 192 (514)
T 1jcn_A 133 AKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEK----DHTTLLSE----------------VMTPRIELVVAPAGV 192 (514)
T ss_dssp --------CEESCC--------CCEECTTTTC------------------------------------CCBCCCCEETTC
T ss_pred HHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhc----cCCCCHHH----------------HhCCCCCCeEECCCC
Confidence 4678899999999983 2399999999999754210 11224444 4455 789999999
Q ss_pred CHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 79 PLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 79 ~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
++.+++++|.+++.+.+||+|++|+++|+||+.|+++.+.
T Consensus 193 ~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 193 TLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp CSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred CHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 9999999999999999999999999999999999887543
No 70
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.26 E-value=5e-13 Score=99.42 Aligned_cols=90 Identities=17% Similarity=0.334 Sum_probs=0.5
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccccCcHHHHHhhhhhcHHHHHHHHhcCCCCCCCccccccceEEEeCCCCHHH
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRGCHYAVLQTWLPLTALEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSE 82 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~ 82 (126)
.+.+++++.+||+|+ + +++|+++.+|+.. . ...++.++ |+++++++.+++++.+
T Consensus 118 ~~~~~~~~~~pVvd~-~-~lvGivt~~Dl~~---~-----~~~~v~~i----------------m~~~~~~v~~~~~l~e 171 (486)
T 2cu0_A 118 LMEKHGIDGLPVVED-E-KVVGIITKKDIAA---R-----EGKLVKEL----------------MTKEVITVPESIEVEE 171 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHcCCcEEEEEEC-C-EEEEEEEHHHhcc---C-----CCCCHHHH----------------ccCCCeEECCcCcHHH
Confidence 456788999999997 6 9999999999964 1 12244444 4557889999999999
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
+++.|.+++++.+||+|++|+++|+||+.|+++...
T Consensus 172 al~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 172 ALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -----------------------------------C
T ss_pred HHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 999999999999999999999999999999999864
No 71
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.23 E-value=8e-12 Score=80.62 Aligned_cols=53 Identities=25% Similarity=0.333 Sum_probs=49.7
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
++|+++++++.+++++.+|++.|.+++++.+||+|++|+++|+||..|+++..
T Consensus 22 diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~ 74 (170)
T 4esy_A 22 DILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGS 74 (170)
T ss_dssp GGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGT
T ss_pred HhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHH
Confidence 38888999999999999999999999999999999999999999999998653
No 72
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.19 E-value=6.5e-11 Score=65.46 Aligned_cols=49 Identities=14% Similarity=0.205 Sum_probs=45.1
Q ss_pred ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 70 ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 70 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++.++.+++++.+|++.|.+++++.+||+|+ |+++|+||..|+++.+..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 4678999999999999999999999999996 999999999999998643
No 73
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.13 E-value=1.9e-10 Score=72.37 Aligned_cols=55 Identities=13% Similarity=0.151 Sum_probs=50.4
Q ss_pred cccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-CceEEEEeHHHHHHHHHHh
Q 039385 66 TQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ-RLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 66 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~-~~lvGivs~~dil~~~~~~ 120 (126)
+|++ ++.++.+++++.+|++.|.+++...+||+|++ |+++|+||..|+++.+...
T Consensus 28 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 28 IMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp TSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred ccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC
Confidence 6776 89999999999999999999999999999987 8999999999999987543
No 74
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.12 E-value=1.1e-10 Score=74.56 Aligned_cols=51 Identities=16% Similarity=0.132 Sum_probs=47.0
Q ss_pred cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 69 RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 69 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
.++.++.+++|+.+|+..|.++++.++||+|++|+++|+||..|+++++..
T Consensus 25 ~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~ 75 (156)
T 3k6e_A 25 KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred hHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhh
Confidence 578999999999999999999999999999988999999999999988754
No 75
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.07 E-value=3.1e-10 Score=77.06 Aligned_cols=56 Identities=14% Similarity=0.191 Sum_probs=52.0
Q ss_pred ccccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 64 NTTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 64 ~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
.++|.+++.++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++.+..
T Consensus 10 ~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 10 EDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp GGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHC
T ss_pred HHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 34788899999999999999999999999999999988999999999999998754
No 76
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.06 E-value=5.6e-10 Score=70.28 Aligned_cols=54 Identities=17% Similarity=0.269 Sum_probs=50.3
Q ss_pred cccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 66 TQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 66 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+|.+ ++.++.+++++.+|++.|.+++...+||+|++|+++|+||..|+++.+.+
T Consensus 33 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 33 IMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp TSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS
T ss_pred HhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc
Confidence 6777 89999999999999999999999999999989999999999999987753
No 77
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.06 E-value=2.8e-10 Score=69.09 Aligned_cols=54 Identities=15% Similarity=0.303 Sum_probs=50.2
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 6 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~ 59 (122)
T 3kpb_A 6 ILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ 59 (122)
T ss_dssp HCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT
T ss_pred hhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 567788999999999999999999999999999999999999999999998654
No 78
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.04 E-value=7.3e-10 Score=75.98 Aligned_cols=56 Identities=16% Similarity=0.201 Sum_probs=51.5
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC--CceEEEEeHHHHHHHHHHh
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ--RLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~--~~lvGivs~~dil~~~~~~ 120 (126)
++|+++++++.+++++.+|.++|.+++++.+||||++ ++++|+||+.||++++...
T Consensus 17 diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 17 DIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 4889999999999999999999999999999999964 6899999999999987654
No 79
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.02 E-value=1.1e-09 Score=68.18 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=50.5
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCC--ceEEEEeHHHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQR--LLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~--~lvGivs~~dil~~~~~ 119 (126)
++|.+++.++.+++++.+|++.|.+++.+.+||+|+++ +++|+||..|+++.+.+
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~ 65 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQ 65 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHT
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhc
Confidence 37778899999999999999999999999999999888 99999999999998654
No 80
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.01 E-value=2e-10 Score=73.08 Aligned_cols=70 Identities=11% Similarity=0.204 Sum_probs=56.6
Q ss_pred HHHHHHHhcCCCCCCCcccccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCC-ceEEEEeHHHHHHHHH
Q 039385 48 LEFTQQVLTSPLFSESNTTQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQR-LLLGLVSLTDMIRVLR 118 (126)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~-~lvGivs~~dil~~~~ 118 (126)
.+++.........++++ +|++ ++.++.+++++.+|++.|.++++..+||+|+++ +++|+||..|+++.+.
T Consensus 26 ~~~i~~~~~l~~~~v~d-iM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~ 98 (156)
T 3oi8_A 26 LLRLEKVLDFSDLEVRD-AMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMF 98 (156)
T ss_dssp HHHHHHHHHHTTCBGGG-TCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSS
T ss_pred HHHHHHHhccCCCCHhh-eeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH
Confidence 34555555555555544 6765 789999999999999999999999999999874 9999999999998753
No 81
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.01 E-value=2e-09 Score=69.80 Aligned_cols=70 Identities=14% Similarity=0.076 Sum_probs=56.9
Q ss_pred HHHHHHhcCCCCCCCccccc--cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-CceEEEEeHHHHHHHHHH
Q 039385 49 EFTQQVLTSPLFSESNTTQQ--RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ-RLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~-~~lvGivs~~dil~~~~~ 119 (126)
+++.........++++ +|+ .+++++.+++++.+|++.|.++++..+||+|++ ++++|+||..|+++.+..
T Consensus 25 ~~i~~~l~l~~~~v~d-iM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~ 97 (173)
T 3ocm_A 25 NMVSGVLTLAERSIRS-IMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLIT 97 (173)
T ss_dssp HHHHHHHHHTTSCSTT-TSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHH
T ss_pred HHHHHHhccCCCCHHH-hCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhc
Confidence 4444444455555544 675 468999999999999999999999999999976 899999999999998754
No 82
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.01 E-value=7.6e-10 Score=70.56 Aligned_cols=55 Identities=22% Similarity=0.247 Sum_probs=50.7
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++|.+++.++.+++++.+|+..|.+++...+||+|++|+++|+||..|+++.+..
T Consensus 9 dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 9 DMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp GTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHH
Confidence 3777789999999999999999999999999999988999999999999988753
No 83
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.00 E-value=1.9e-09 Score=69.02 Aligned_cols=51 Identities=20% Similarity=0.397 Sum_probs=47.8
Q ss_pred ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 70 ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 70 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 36 ~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 36 DVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhc
Confidence 689999999999999999999999999999999999999999999987653
No 84
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.00 E-value=1.2e-09 Score=66.46 Aligned_cols=53 Identities=15% Similarity=0.258 Sum_probs=48.9
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+|.+++.++.+++++.+|++.|.+++.+.+||+| +|+++|+||..|+++.+.+
T Consensus 6 ~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~ 58 (125)
T 1pbj_A 6 VMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAE 58 (125)
T ss_dssp HCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred hcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhc
Confidence 5677899999999999999999999999999999 8999999999999987654
No 85
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.00 E-value=9.1e-10 Score=69.70 Aligned_cols=54 Identities=15% Similarity=0.102 Sum_probs=49.1
Q ss_pred ccc--cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 66 TQQ--RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 66 ~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+|+ .++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 20 im~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 20 FLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp GEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred HcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh
Confidence 566 678999999999999999999999999999989999999999999998764
No 86
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.00 E-value=8.4e-10 Score=69.36 Aligned_cols=50 Identities=16% Similarity=0.172 Sum_probs=47.0
Q ss_pred cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 69 RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 69 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
.++.++.+++++.+|++.|.+++...+||+|++|+++|+||..|+++.+.
T Consensus 25 ~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 25 EKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGIL 74 (150)
T ss_dssp GGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTB
T ss_pred CceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999998874
No 87
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.00 E-value=1.2e-09 Score=67.68 Aligned_cols=52 Identities=17% Similarity=0.287 Sum_probs=48.1
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRV 116 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~ 116 (126)
++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.
T Consensus 11 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~ 62 (138)
T 2yzi_A 11 VYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRR 62 (138)
T ss_dssp GTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHH
Confidence 3777889999999999999999999999999999988999999999999843
No 88
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.97 E-value=1.4e-09 Score=67.16 Aligned_cols=51 Identities=6% Similarity=0.200 Sum_probs=46.6
Q ss_pred cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcC-CCceEEEEeHHHHHHHHHH
Q 039385 69 RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQ-QRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 69 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-~~~lvGivs~~dil~~~~~ 119 (126)
.++.++.+++++.+|++.|.++++..+||+++ +|+++|+||..|+++.+..
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~ 63 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTE 63 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTS
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhc
Confidence 46899999999999999999999999999975 5899999999999998754
No 89
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.97 E-value=2.1e-09 Score=71.49 Aligned_cols=68 Identities=10% Similarity=0.039 Sum_probs=58.2
Q ss_pred HHHHHHHhcCCCCCCCccccccceEEEeCCCCHHHHHHHHHhc---CCCEEEEEcCCCceEEEEeHHHHHHH
Q 039385 48 LEFTQQVLTSPLFSESNTTQQRELLTCQVDSPLSEVIGKALTK---HVHRVWVVDQQRLLLGLVSLTDMIRV 116 (126)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m~~~---~~~~lpVvd~~~~lvGivs~~dil~~ 116 (126)
.+.+..+..++..++++ +|+++++++++++++.+|++.|.++ +++.+||+|++|+++|+||..|++..
T Consensus 42 ~~~i~~~l~~~~~~v~~-iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 112 (205)
T 3kxr_A 42 RQRFELYDQYSENEIGR-YTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH 112 (205)
T ss_dssp HHHHHHHHHSCTTCGGG-GCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS
T ss_pred HHHHHHHhCCCcchHHh-hccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC
Confidence 44555566677666655 8888999999999999999999987 89999999999999999999999864
No 90
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.97 E-value=2.4e-09 Score=65.90 Aligned_cols=54 Identities=17% Similarity=0.349 Sum_probs=49.7
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++|.+++.++.+++++.+|++.|.+++.+.+||+| +|+++|+||..|+++.+..
T Consensus 8 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~ 61 (133)
T 2ef7_A 8 EYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGK 61 (133)
T ss_dssp GTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHT
T ss_pred HhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhc
Confidence 37777899999999999999999999999999999 8999999999999987654
No 91
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.96 E-value=1.2e-09 Score=69.40 Aligned_cols=53 Identities=15% Similarity=0.122 Sum_probs=48.6
Q ss_pred cccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 66 TQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 66 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
+|.+ ++.++.+++++.+|++.|.++++..+||+|++|+++|+||..|+++.+.
T Consensus 19 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 73 (159)
T 1yav_A 19 FMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIF 73 (159)
T ss_dssp HSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHB
T ss_pred HhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhh
Confidence 4555 7899999999999999999999999999998899999999999998764
No 92
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.96 E-value=1.5e-09 Score=67.11 Aligned_cols=54 Identities=20% Similarity=0.410 Sum_probs=49.3
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHH-HHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDM-IRVLR 118 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~di-l~~~~ 118 (126)
++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+ ++.+.
T Consensus 12 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 12 DVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp GTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred HhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 3777789999999999999999999999999999988999999999999 87653
No 93
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.96 E-value=1.7e-09 Score=67.24 Aligned_cols=54 Identities=20% Similarity=0.418 Sum_probs=49.9
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
.|.+++.++.+++++.+|++.|.+++...+||+|++|+++|+||..|+++.+.+
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcc
Confidence 566788999999999999999999999999999988999999999999987654
No 94
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.96 E-value=2.7e-09 Score=67.87 Aligned_cols=51 Identities=22% Similarity=0.375 Sum_probs=47.2
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
+|+++ +++.+++++.+|++.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 22 im~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 72 (159)
T 3fv6_A 22 FQSIP-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRAS 72 (159)
T ss_dssp SCBCC-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred HcCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHh
Confidence 66654 5999999999999999999999999999899999999999999976
No 95
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.96 E-value=1e-09 Score=67.55 Aligned_cols=54 Identities=13% Similarity=0.256 Sum_probs=48.6
Q ss_pred ccc--cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-CceEEEEeHHHHHHHHHH
Q 039385 66 TQQ--RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ-RLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 66 ~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~-~~lvGivs~~dil~~~~~ 119 (126)
+|+ .++.++.+++++.+|++.|.+++...+||+|++ |+++|+||..|+++.+..
T Consensus 11 iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~ 67 (130)
T 3i8n_A 11 VMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS 67 (130)
T ss_dssp TSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT
T ss_pred CCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc
Confidence 666 456799999999999999999999999999987 899999999999998754
No 96
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.94 E-value=1.6e-09 Score=66.48 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=49.1
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
++|.+++.++.+++++.+|++.|.+++.+.+||+|+ |+++|+||..|+++.+.
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~ 61 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRK 61 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCS
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHh
Confidence 377888999999999999999999999999999997 99999999999997654
No 97
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.93 E-value=2.5e-09 Score=67.95 Aligned_cols=53 Identities=23% Similarity=0.417 Sum_probs=48.7
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcC--CCceEEEEeHHHHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQ--QRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~--~~~lvGivs~~dil~~~~ 118 (126)
+|.+++.++.+++++.+|++.|.+++.+.+||+|+ +|+++|+||..|+++.+.
T Consensus 18 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 18 FMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp HCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred HcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHH
Confidence 56678899999999999999999999999999996 789999999999998774
No 98
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.93 E-value=6.4e-10 Score=68.21 Aligned_cols=53 Identities=15% Similarity=0.298 Sum_probs=47.4
Q ss_pred cccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-CceEEEEeHHHHHHHHH
Q 039385 66 TQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ-RLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 66 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~-~~lvGivs~~dil~~~~ 118 (126)
+|++ ++.++.+++++.+|++.|.+++...+||+|++ |+++|+||..|+++.+.
T Consensus 8 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~ 63 (127)
T 3nqr_A 8 IMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMR 63 (127)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGS
T ss_pred hcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 4553 48999999999999999999999999999987 89999999999987653
No 99
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.92 E-value=1.7e-09 Score=68.33 Aligned_cols=53 Identities=19% Similarity=0.138 Sum_probs=49.0
Q ss_pred cccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 66 TQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 66 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
+|.+ ++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 16 im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 70 (157)
T 2emq_A 16 FLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAIL 70 (157)
T ss_dssp TCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSB
T ss_pred hccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 6665 8899999999999999999999999999998899999999999998764
No 100
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.92 E-value=3.3e-09 Score=69.03 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=50.0
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
++|.+++.++.+++++.+|+++|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 13 ~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 13 KIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp GTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred HhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 377788999999999999999999999999999998899999999999998764
No 101
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.92 E-value=9e-10 Score=67.78 Aligned_cols=53 Identities=13% Similarity=0.298 Sum_probs=47.4
Q ss_pred ccc--cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-CceEEEEeHHHHHHHHH
Q 039385 66 TQQ--RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ-RLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 66 ~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~-~~lvGivs~~dil~~~~ 118 (126)
+|+ .++.++.+++++.+|++.|.+++..++||+|++ |+++|+||..|+++.+.
T Consensus 10 iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~ 65 (129)
T 3jtf_A 10 IMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML 65 (129)
T ss_dssp HCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT
T ss_pred hCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc
Confidence 445 577899999999999999999999999999975 89999999999987653
No 102
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.91 E-value=5.1e-09 Score=66.38 Aligned_cols=53 Identities=21% Similarity=0.448 Sum_probs=49.2
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCE-EEEEcCCCceEEEEeHHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHR-VWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~-lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
++|.+++.++.+++++.+|++.|.+++... +||+|++ +++|+||..|+++.+.
T Consensus 20 ~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 20 KLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp TSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHH
T ss_pred hcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHh
Confidence 378889999999999999999999999999 9999977 9999999999998764
No 103
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.91 E-value=9.2e-10 Score=68.37 Aligned_cols=53 Identities=11% Similarity=0.223 Sum_probs=47.9
Q ss_pred ccc--cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC-CceEEEEeHHHHHHHHH
Q 039385 66 TQQ--RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ-RLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 66 ~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~-~~lvGivs~~dil~~~~ 118 (126)
+|+ .++.++.+++++.+|++.|.++++..+||+|++ |+++|+||..|+++.+.
T Consensus 8 iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 8 IMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp HSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGG
T ss_pred ccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH
Confidence 444 578999999999999999999999999999987 79999999999998764
No 104
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.88 E-value=1.9e-09 Score=66.38 Aligned_cols=50 Identities=8% Similarity=0.096 Sum_probs=46.3
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIR 115 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~ 115 (126)
+|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVI 62 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHH
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHH
Confidence 55668899999999999999999999999999988899999999999984
No 105
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.88 E-value=5.6e-09 Score=65.86 Aligned_cols=51 Identities=18% Similarity=0.281 Sum_probs=47.4
Q ss_pred cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 69 RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 69 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+++.++.+++++.+|++.|.+++...+||+|++|+++|+||..|+++.+..
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~ 79 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAE 79 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcc
Confidence 578889999999999999999999999999988999999999999987653
No 106
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.87 E-value=2.7e-09 Score=67.43 Aligned_cols=51 Identities=20% Similarity=0.303 Sum_probs=46.5
Q ss_pred ceEEEeCCCCHHHHHHHHHhcCCCEEEEE-cC-CCceEEEEeHHHHHHHHHHh
Q 039385 70 ELLTCQVDSPLSEVIGKALTKHVHRVWVV-DQ-QRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 70 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVv-d~-~~~lvGivs~~dil~~~~~~ 120 (126)
++.++.+++++.+|++.|.++++..+||+ |+ +|+++|+||..|+++.+...
T Consensus 31 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~ 83 (153)
T 3oco_A 31 SMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID 83 (153)
T ss_dssp GCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH
T ss_pred heEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC
Confidence 78999999999999999999999999999 65 48999999999999987643
No 107
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.85 E-value=4.1e-09 Score=66.00 Aligned_cols=51 Identities=20% Similarity=0.315 Sum_probs=47.2
Q ss_pred cccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHH
Q 039385 66 TQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRV 116 (126)
Q Consensus 66 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~ 116 (126)
+|.+ ++.++.+++++.+|++.|.+++...+||+|++|+++|+||..|+++.
T Consensus 10 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 10 FMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp TSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred ccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 6766 78999999999999999999999999999988999999999999853
No 108
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.83 E-value=3e-09 Score=68.51 Aligned_cols=50 Identities=20% Similarity=0.286 Sum_probs=46.5
Q ss_pred cccc--ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHH
Q 039385 66 TQQR--ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIR 115 (126)
Q Consensus 66 ~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~ 115 (126)
+|.+ ++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++
T Consensus 9 im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~ 60 (180)
T 3sl7_A 9 FMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLA 60 (180)
T ss_dssp HSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTC
T ss_pred hcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHh
Confidence 4555 7899999999999999999999999999999999999999999985
No 109
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.82 E-value=6.1e-09 Score=64.27 Aligned_cols=48 Identities=15% Similarity=0.275 Sum_probs=44.8
Q ss_pred cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 69 RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 69 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
+++.++.+++++.+|++.|.+++.+.+||+| +|+++|+||..|+++.+
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~ 64 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKS 64 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHG
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHH
Confidence 5789999999999999999999999999999 89999999999999743
No 110
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.78 E-value=1e-08 Score=66.39 Aligned_cols=49 Identities=24% Similarity=0.234 Sum_probs=45.7
Q ss_pred eEEE--eCCCCHHHHHHHHHhcCCCEEEEE--cCCCceEEEEeHHHHHHHHHH
Q 039385 71 LLTC--QVDSPLSEVIGKALTKHVHRVWVV--DQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 71 ~~~v--~~~~~l~~~~~~m~~~~~~~lpVv--d~~~~lvGivs~~dil~~~~~ 119 (126)
+.++ .+++++.+|++.|.+++.+.+||+ |++|+++|+||..|+++.+..
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 7788 999999999999999999999999 788999999999999998764
No 111
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.77 E-value=2e-08 Score=69.93 Aligned_cols=63 Identities=21% Similarity=0.293 Sum_probs=52.8
Q ss_pred HHhcCCCCCCCccccccceEEEeCCCCHHHHHHHHHhc-----CCCEEEEEcCCCceEEEEeHHHHHHH
Q 039385 53 QVLTSPLFSESNTTQQRELLTCQVDSPLSEVIGKALTK-----HVHRVWVVDQQRLLLGLVSLTDMIRV 116 (126)
Q Consensus 53 ~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m~~~-----~~~~lpVvd~~~~lvGivs~~dil~~ 116 (126)
.+..++..+++ .+|+++++++.+++++.+|++.|.++ +++.+||+|++|+++|+||..|++..
T Consensus 130 ~ll~~~~~~v~-~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 130 ELLHYEDETAG-AIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN 197 (286)
T ss_dssp HHTTSCTTBHH-HHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS
T ss_pred HHhcCChHHHH-HhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC
Confidence 34444444443 38888999999999999999999987 88999999989999999999999864
No 112
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.76 E-value=6.5e-09 Score=69.39 Aligned_cols=53 Identities=11% Similarity=0.191 Sum_probs=48.9
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
..|.+++.++.+++++.+|++.|.+++...+||+|++++++|+||..|+.+.+
T Consensus 17 ~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~ 69 (213)
T 1vr9_A 17 KWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD 69 (213)
T ss_dssp GGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC
T ss_pred HhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc
Confidence 37788999999999999999999999999999999889999999999997654
No 113
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.73 E-value=1.7e-08 Score=75.70 Aligned_cols=57 Identities=18% Similarity=0.187 Sum_probs=52.4
Q ss_pred ccccccceEEEeCC-CCHHHHHHHHHhcCCCEEEEEc-CCCceEEEEeHHHHHHHHHHh
Q 039385 64 NTTQQRELLTCQVD-SPLSEVIGKALTKHVHRVWVVD-QQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 64 ~~~m~~~~~~v~~~-~~l~~~~~~m~~~~~~~lpVvd-~~~~lvGivs~~dil~~~~~~ 120 (126)
.++|+++++++.++ +++.+|+++|.++++..+||+| ++++++|+||..||++.+...
T Consensus 387 ~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 387 AELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp GGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH
T ss_pred HHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc
Confidence 35888899999999 9999999999999999999999 789999999999999887653
No 114
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.71 E-value=6.8e-08 Score=60.99 Aligned_cols=50 Identities=22% Similarity=0.248 Sum_probs=45.5
Q ss_pred cceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 69 RELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 69 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
+++.++.+++++.+|++.|.+++.+.+||++ +|+++|+||..|+++.+..
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~ 70 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVL 70 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGG
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHh
Confidence 4678999999999999999999999999966 8999999999999988643
No 115
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.69 E-value=9e-08 Score=66.24 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=52.6
Q ss_pred HhcCCCCCCCccccccceEEEeCCCCHHHHHHHHHhc-----CCCEEEEEcCCCceEEEEeHHHHHHH
Q 039385 54 VLTSPLFSESNTTQQRELLTCQVDSPLSEVIGKALTK-----HVHRVWVVDQQRLLLGLVSLTDMIRV 116 (126)
Q Consensus 54 ~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m~~~-----~~~~lpVvd~~~~lvGivs~~dil~~ 116 (126)
+..+...+++ .+|+++++++.+++++.+|++.|.++ ++..+||+|++|+++|+||..|++..
T Consensus 129 ~l~~~~~~v~-~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 129 LARYEEDEAG-GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 195 (278)
T ss_dssp HHHSCTTBGG-GTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS
T ss_pred HHCCCcchHH-hhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC
Confidence 3444444444 48888999999999999999999887 78999999988999999999999864
No 116
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.54 E-value=2e-07 Score=69.13 Aligned_cols=63 Identities=19% Similarity=0.213 Sum_probs=52.8
Q ss_pred HHhcCCCCCCCccccccceEEEeCCCCHHHHHHHHHhc-----CCCEEEEEcCCCceEEEEeHHHHHHH
Q 039385 53 QVLTSPLFSESNTTQQRELLTCQVDSPLSEVIGKALTK-----HVHRVWVVDQQRLLLGLVSLTDMIRV 116 (126)
Q Consensus 53 ~~~~~~~~~~~~~~m~~~~~~v~~~~~l~~~~~~m~~~-----~~~~lpVvd~~~~lvGivs~~dil~~ 116 (126)
.+.+++..+++ .+|+++++++++++++.++++.|.++ ++..+||+|++++++|+||.+|++..
T Consensus 148 ~~l~~~~~~v~-~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~ 215 (473)
T 2zy9_A 148 ALARYEEDEAG-GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 215 (473)
T ss_dssp HHHTSCTTBST-TTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS
T ss_pred HHhcCCCCCHH-HhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC
Confidence 34445544444 48888999999999999999999886 57999999988999999999999864
No 117
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.37 E-value=6.8e-08 Score=73.94 Aligned_cols=55 Identities=18% Similarity=0.124 Sum_probs=50.5
Q ss_pred cccc--cceEEEeCCCCHHHHHHHHH-hcCCCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 65 TTQQ--RELLTCQVDSPLSEVIGKAL-TKHVHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 65 ~~m~--~~~~~v~~~~~l~~~~~~m~-~~~~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
++|+ +++.++++++++.++.+.|. +++.+.+||+|++++++|+||++|+++.+.+
T Consensus 457 diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~ 514 (632)
T 3org_A 457 EIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQH 514 (632)
T ss_dssp HHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTT
T ss_pred HHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHH
Confidence 4777 78999999999999999999 7999999999998999999999999987654
No 118
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.35 E-value=5.4e-07 Score=67.25 Aligned_cols=49 Identities=14% Similarity=0.176 Sum_probs=45.3
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMI 114 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil 114 (126)
.|..+++++.+++++.+++++|.++++..+||+|++++++|+||..|+.
T Consensus 94 ~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 94 GVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR 142 (496)
T ss_dssp --CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh
Confidence 6778899999999999999999999999999999999999999999996
No 119
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.28 E-value=4.3e-08 Score=54.45 Aligned_cols=28 Identities=11% Similarity=0.283 Sum_probs=24.5
Q ss_pred cccCCCCceeeEeeCCCceeEEEeeccccc
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLR 32 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~ 32 (126)
.|.+++++++||+|+ + +++|++|.+|+.
T Consensus 17 ~M~~~~i~~~~V~d~-~-~lvGIvT~~Di~ 44 (70)
T 3ghd_A 17 ILSRNKAGSAVVMEG-D-EILGVVTERDIL 44 (70)
T ss_dssp HHHHTTCSEEEEEET-T-EEEEEEEHHHHH
T ss_pred HHHHcCCCEEEEEEC-C-EEEEEEEHHHHH
Confidence 367899999999984 5 899999999994
No 120
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.19 E-value=3.1e-06 Score=62.92 Aligned_cols=50 Identities=18% Similarity=0.153 Sum_probs=47.3
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEc--CCCceEEEEeHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVD--QQRLLLGLVSLTDMIR 115 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd--~~~~lvGivs~~dil~ 115 (126)
+|..+++++.+++++.++++.|.+++...+||+| ++++++|+||..|++.
T Consensus 95 im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 95 GVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp TTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred cCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 7788999999999999999999999999999999 7899999999999985
No 121
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.18 E-value=2.6e-06 Score=63.80 Aligned_cols=50 Identities=16% Similarity=0.127 Sum_probs=46.4
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcC--CCceEEEEeHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQ--QRLLLGLVSLTDMIR 115 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~--~~~lvGivs~~dil~ 115 (126)
.|..+++++.+++++.+++++|.++++..+||+|+ +++++|+||..|+..
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~ 169 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF 169 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh
Confidence 56678899999999999999999999999999998 899999999999863
No 122
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.15 E-value=2.8e-07 Score=68.64 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=0.0
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIR 115 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~ 115 (126)
.|.++++++.+++++.++++.|.++++..+||+|++++++|+||..|+..
T Consensus 100 iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 100 GIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRF 149 (494)
T ss_dssp --------------------------------------------------
T ss_pred cCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHh
Confidence 67789999999999999999999999999999998899999999999975
No 123
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.01 E-value=7.6e-07 Score=66.53 Aligned_cols=49 Identities=22% Similarity=0.216 Sum_probs=0.0
Q ss_pred cccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCC---CceEEEEeHHHHHH
Q 039385 67 QQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQ---RLLLGLVSLTDMIR 115 (126)
Q Consensus 67 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~---~~lvGivs~~dil~ 115 (126)
|.++++++.+++++.++++.|.++++..+||+|++ ++++|+||..|++.
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~ 154 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPI 154 (503)
T ss_dssp ----------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHh
Confidence 77789999999999999999999999999999977 89999999999985
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.90 E-value=1.6e-06 Score=64.66 Aligned_cols=48 Identities=23% Similarity=0.228 Sum_probs=0.0
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMI 114 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil 114 (126)
.|..+++++.+++++.+++++|.++++..+||+| +++++|+||..|+.
T Consensus 93 ~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~ 140 (490)
T 4avf_A 93 AIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLR 140 (490)
T ss_dssp -------------------------------------------------
T ss_pred CcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhh
Confidence 6777889999999999999999999999999999 89999999999996
No 125
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.81 E-value=1.1e-06 Score=48.02 Aligned_cols=29 Identities=10% Similarity=0.274 Sum_probs=25.5
Q ss_pred cccCCCCceeeEeeCCCceeEEEeecccccc
Q 039385 3 WYKKPNVERNSISLGNGWRLIGTFSASDLRG 33 (126)
Q Consensus 3 ~~~~~~~~~~pVvd~~~~~l~G~is~~dl~~ 33 (126)
.|.+++++.+||+|+ + +++|++|.+|+..
T Consensus 17 ~m~~~~~~~~pV~d~-~-~l~Givt~~dl~~ 45 (70)
T 3fio_A 17 ILSRNKAGSAVVMEG-D-EILGVVTERDILD 45 (70)
T ss_dssp HHHHTTCSEEEEEET-T-EEEEEEEHHHHHH
T ss_pred HHHHcCCCEEEEEEC-C-EEEEEEEHHHHHH
Confidence 467889999999997 6 9999999999954
No 126
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.81 E-value=2.5e-06 Score=63.76 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=0.0
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcC---CCceEEEEeHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQ---QRLLLGLVSLTDMIR 115 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~---~~~lvGivs~~dil~ 115 (126)
-|..+++++.|+.++.+++++|.++++..+||+|+ +++++||||.+|+-.
T Consensus 143 g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf 195 (556)
T 4af0_A 143 GFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF 195 (556)
T ss_dssp -----------------------------------------------------
T ss_pred CccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc
Confidence 34557899999999999999999999999999985 579999999998743
No 127
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.74 E-value=2.3e-06 Score=64.08 Aligned_cols=52 Identities=10% Similarity=0.158 Sum_probs=25.1
Q ss_pred cccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcC---CCceEEEEeHHHHHHH
Q 039385 65 TTQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQ---QRLLLGLVSLTDMIRV 116 (126)
Q Consensus 65 ~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~---~~~lvGivs~~dil~~ 116 (126)
+.|.+++.++.+++++.++++.|.+++++.+||+|+ +++++|+||..|+...
T Consensus 112 ~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 112 QGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp TTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC--
T ss_pred hccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhh
Confidence 367778899999999999999999999999999997 5899999999998763
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.42 E-value=2.1e-05 Score=58.48 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=0.0
Q ss_pred ccccceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHH
Q 039385 66 TQQRELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIR 115 (126)
Q Consensus 66 ~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~ 115 (126)
.|..+++++.+++++.++++.|.+++...+||+|+ ++++|+|+..|++.
T Consensus 98 ~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~ 146 (486)
T 2cu0_A 98 LIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA 146 (486)
T ss_dssp --------------------------------------------------
T ss_pred ccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc
Confidence 56778999999999999999999999999999997 99999999999864
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=89.30 E-value=1.2 Score=24.67 Aligned_cols=28 Identities=21% Similarity=0.328 Sum_probs=22.1
Q ss_pred CCEEEEEcCCCceEEEEeHHHHHHHHHH
Q 039385 92 VHRVWVVDQQRLLLGLVSLTDMIRVLRT 119 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~~dil~~~~~ 119 (126)
...+=++|++|..+|++++.+-++...+
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAAR 40 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHH
Confidence 3557788888999999999988876554
No 130
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=73.35 E-value=3.2 Score=24.68 Aligned_cols=18 Identities=22% Similarity=0.366 Sum_probs=14.7
Q ss_pred CEEEEEcCCCceEEEEeH
Q 039385 93 HRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~ 110 (126)
-..||.+++|+++|+|+.
T Consensus 104 ~~~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 104 GKSPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEEEECTTCCEEEEEEE
T ss_pred EEEeEECCCCCEEEEEEE
Confidence 346999878999999874
No 131
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=70.24 E-value=2.6 Score=25.58 Aligned_cols=28 Identities=11% Similarity=0.116 Sum_probs=20.2
Q ss_pred CEEEEEcCCCceEEEEeHHHHHHHHHHh
Q 039385 93 HRVWVVDQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~~dil~~~~~~ 120 (126)
-..||.+++|+++|+|+..--+..+...
T Consensus 109 ~~~PV~~~~g~viGvv~vg~~~~~~~~~ 136 (142)
T 3by8_A 109 VFTPIYDENHKQIGVVAIGLELSRVTQQ 136 (142)
T ss_dssp EEEEEECTTSCEEEEEEEEEEHHHHHHH
T ss_pred EEEeEEcCCCCEEEEEEEeEEHHHHHHH
Confidence 3469988789999999876555555443
No 132
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=66.60 E-value=3.8 Score=27.04 Aligned_cols=19 Identities=16% Similarity=0.141 Sum_probs=15.3
Q ss_pred CCEEEEEcCCCceEEEEeH
Q 039385 92 VHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~ 110 (126)
-.-=|++|.+|+++||+|.
T Consensus 188 ~SGGPLv~~~G~vVGI~s~ 206 (231)
T 3tjo_A 188 NAGGPLVNLDGEVIGINTL 206 (231)
T ss_dssp TTTSEEECTTSCEEEEEEE
T ss_pred CchhHeecCCCeEEEEEeE
Confidence 3444899988999999985
No 133
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=65.16 E-value=4.5 Score=25.39 Aligned_cols=23 Identities=13% Similarity=0.028 Sum_probs=19.2
Q ss_pred HhcCCCEEEEEcCCCceEEEEeH
Q 039385 88 LTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 88 ~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
...+..-=|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 45677788999999999999863
No 134
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=64.84 E-value=3.8 Score=27.10 Aligned_cols=24 Identities=13% Similarity=0.051 Sum_probs=19.3
Q ss_pred hcCCCEEEEEcCCCceEEEEeHHH
Q 039385 89 TKHVHRVWVVDQQRLLLGLVSLTD 112 (126)
Q Consensus 89 ~~~~~~lpVvd~~~~lvGivs~~d 112 (126)
+.+..-=||+|.+|+++||-+.++
T Consensus 123 ~pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 123 ACGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp CCCSTTCEEEETTSCEEEEEEC--
T ss_pred CCCCCCCccCCCCCcEEEEEeccC
Confidence 467777899999999999998765
No 135
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=64.56 E-value=19 Score=21.23 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEE-EeHHHHHHHHHHhh
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGL-VSLTDMIRVLRTSI 121 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGi-vs~~dil~~~~~~~ 121 (126)
.++.+.+.-..+..+.++|.+|++++. ++..++.+.+.+..
T Consensus 99 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~l~~~l~~l~ 140 (152)
T 2lrn_A 99 KDVLESYCIVGFPHIILVDPEGKIVAKELRGDDLYNTVEKFV 140 (152)
T ss_dssp HHHHHHTTCCSSCEEEEECTTSEEEEECCCTTHHHHHHHHHH
T ss_pred HHHHHHhCCCcCCeEEEECCCCeEEEeeCCHHHHHHHHHHHH
Confidence 334444444567788899999999887 67777766665543
No 136
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=64.23 E-value=4.1 Score=26.92 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=16.6
Q ss_pred cCCCEEEEEcCCCceEEEEeH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+-.-=|++|.+|+++||+|.
T Consensus 173 ~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 173 HGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp TTCTTCEEECTTCCEEEEECC
T ss_pred CCCchHHeeCCCCeEEEEEee
Confidence 345556899989999999875
No 137
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=64.14 E-value=2.7 Score=26.33 Aligned_cols=34 Identities=18% Similarity=0.421 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHH
Q 039385 80 LSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMI 114 (126)
Q Consensus 80 l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil 114 (126)
+.+.+..+.+.+-..++|-. +++++|+|...|.+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCC
Confidence 55666677777777777765 79999999988754
No 138
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=62.68 E-value=5 Score=26.40 Aligned_cols=21 Identities=19% Similarity=0.069 Sum_probs=16.4
Q ss_pred cCCCEEEEEcCCCceEEEEeH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+-.-=|++|.+|+++||++.
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~ 200 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFG 200 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEe
Confidence 344555899888999999975
No 139
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=62.65 E-value=4.5 Score=26.08 Aligned_cols=20 Identities=15% Similarity=0.087 Sum_probs=15.4
Q ss_pred CCCEEEEEcCCCceEEEEeH
Q 039385 91 HVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~ 110 (126)
+-.-=|+++.+|+++||+|.
T Consensus 156 GdSGGPlv~~~g~lvGI~s~ 175 (210)
T 2as9_A 156 GNSGSPVLNSNNEVIGVVYG 175 (210)
T ss_dssp TCTTCEEECTTSCEEEEECC
T ss_pred CCccCcEECCCCeEEEEEec
Confidence 33445899878999999985
No 140
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=61.51 E-value=5.6 Score=25.27 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=14.9
Q ss_pred CEEEEEcCCCceEEEEeHH
Q 039385 93 HRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~~ 111 (126)
.-=|+++.+|+++||+|..
T Consensus 154 SGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 154 SGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TTCEEECTTSCEEEEEEEE
T ss_pred ccCeEECcCCEEEEEEecc
Confidence 4458888788999999863
No 141
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=60.98 E-value=5.6 Score=26.65 Aligned_cols=21 Identities=10% Similarity=0.104 Sum_probs=16.8
Q ss_pred cCCCEEEEEcCCCceEEEEeH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+-.-=|++|.+|+++||.|.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 455666899989999999774
No 142
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=58.85 E-value=6.6 Score=24.85 Aligned_cols=17 Identities=18% Similarity=0.208 Sum_probs=13.9
Q ss_pred EEEEcCCCceEEEEeHH
Q 039385 95 VWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 95 lpVvd~~~~lvGivs~~ 111 (126)
=|+++.+++++||+|..
T Consensus 159 GPl~~~~g~lvGI~s~g 175 (204)
T 2vid_A 159 SPVLNSNNELVGIHFAS 175 (204)
T ss_dssp CEEECTTSCEEEEEEEE
T ss_pred CcEECCCCeEEEEEecC
Confidence 48888788999999853
No 143
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=57.93 E-value=6.9 Score=25.90 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=13.8
Q ss_pred EEEEcCCCceEEEEeH
Q 039385 95 VWVVDQQRLLLGLVSL 110 (126)
Q Consensus 95 lpVvd~~~~lvGivs~ 110 (126)
=|+++.+|+++||+|.
T Consensus 188 GPlv~~~g~lvGI~s~ 203 (246)
T 1qtf_A 188 SGIFNLKGELIGIHSG 203 (246)
T ss_dssp CEEECTTCCEEEEEEE
T ss_pred hheECCCCEEEEEEec
Confidence 4889878999999985
No 144
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=54.27 E-value=12 Score=24.76 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=21.8
Q ss_pred ccCCCCceeeEeeCCCceeEEEeeccccccC
Q 039385 4 YKKPNVERNSISLGNGWRLIGTFSASDLRGC 34 (126)
Q Consensus 4 ~~~~~~~~~pVvd~~~~~l~G~is~~dl~~~ 34 (126)
|.+.+=+.-||+|.+| +++|+-+..|=+..
T Consensus 121 ~T~pGdSGsPVvn~dG-~VIGVHt~s~~~g~ 150 (213)
T 3fan_A 121 FTACGDSGSPVITEAG-ELVGVHTGSNKQGG 150 (213)
T ss_dssp SSCCCSTTCEEEETTS-CEEEEEEC-----C
T ss_pred ecCCCCCCCccCCCCC-cEEEEEeccCCccc
Confidence 4567788999999999 99999999998653
No 145
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=53.49 E-value=9.1 Score=23.32 Aligned_cols=19 Identities=26% Similarity=0.177 Sum_probs=15.5
Q ss_pred CCCEEEEEcCCCceEEEEe
Q 039385 91 HVHRVWVVDQQRLLLGLVS 109 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs 109 (126)
.+...||.|++|+++|++.
T Consensus 107 ~v~~~Pi~d~~G~~~G~ve 125 (151)
T 2qkp_A 107 YVTYAAVRDQAGDFQGVLE 125 (151)
T ss_dssp EEEEEEEECTTCCEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEE
Confidence 3467899998899999884
No 146
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=53.08 E-value=8.4 Score=25.29 Aligned_cols=16 Identities=19% Similarity=0.227 Sum_probs=13.4
Q ss_pred EEEEcCCCceEEEEeH
Q 039385 95 VWVVDQQRLLLGLVSL 110 (126)
Q Consensus 95 lpVvd~~~~lvGivs~ 110 (126)
=|+++.+|+++||+|.
T Consensus 197 GPl~~~~g~lvGI~s~ 212 (242)
T 1agj_A 197 SGIFNSNGELVGIHSS 212 (242)
T ss_dssp CEEECTTSEEEEEEEE
T ss_pred hHhcccCCEEEEEEec
Confidence 3888878999999985
No 147
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=52.46 E-value=17 Score=24.03 Aligned_cols=22 Identities=9% Similarity=0.164 Sum_probs=19.4
Q ss_pred CCEEEEEcCCCceEEEEeHHHH
Q 039385 92 VHRVWVVDQQRLLLGLVSLTDM 113 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~~di 113 (126)
-..++|+|++++++|..++.+.
T Consensus 26 ~E~~~lvd~~~~~~G~~~r~~~ 47 (235)
T 2dho_A 26 AEMCILIDENDNKIGAETKKNC 47 (235)
T ss_dssp CCEEEEECTTCCEEEEEEHHHH
T ss_pred CcEEEEEcCCCCEEEEEEhHHh
Confidence 4679999999999999999875
No 148
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=52.42 E-value=17 Score=24.27 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=19.4
Q ss_pred CCEEEEEcCCCceEEEEeHHHH
Q 039385 92 VHRVWVVDQQRLLLGLVSLTDM 113 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~~di 113 (126)
-..++|+|++++++|..++.+.
T Consensus 37 ~E~~~lvd~~~~~iG~~~r~~~ 58 (246)
T 2pny_A 37 EEMLIVVDENDKVIGADTKRNC 58 (246)
T ss_dssp TCEEEEECTTCCEEEEEEHHHH
T ss_pred cceEEEEcCCCCEEEEEEhHHh
Confidence 4679999999999999999864
No 149
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=52.34 E-value=30 Score=19.63 Aligned_cols=51 Identities=8% Similarity=0.141 Sum_probs=34.7
Q ss_pred EEEeCCC-CHHHHHHHHHhcCCCEEEEEcCCCceE----EEEeHHHHHHHHHHhhh
Q 039385 72 LTCQVDS-PLSEVIGKALTKHVHRVWVVDQQRLLL----GLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 72 ~~v~~~~-~l~~~~~~m~~~~~~~lpVvd~~~~lv----Givs~~dil~~~~~~~~ 122 (126)
+.+..+. .-.++.+.+.-.++..+.++|.+|+++ |..+..++.+.+.+...
T Consensus 66 ~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 66 LKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp EEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHS
T ss_pred EEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHH
Confidence 3444442 456666777777888898998788665 56677888887766543
No 150
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=51.29 E-value=17 Score=20.75 Aligned_cols=38 Identities=3% Similarity=-0.104 Sum_probs=26.5
Q ss_pred HHHHHHhcCCCEEEEEcCCCceE------EEEeHHHHHHHHHHh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLL------GLVSLTDMIRVLRTS 120 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lv------Givs~~dil~~~~~~ 120 (126)
+.+.+.-..+..+.++|.+|+++ |..+..++.+.+.+.
T Consensus 91 ~~~~~~i~~~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 91 IWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HHHHTTCCSSSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC
T ss_pred HHHhcCCCCCCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHH
Confidence 33444446678888999889875 666777777776653
No 151
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=50.43 E-value=10 Score=26.41 Aligned_cols=18 Identities=17% Similarity=0.189 Sum_probs=14.7
Q ss_pred CEEEEEcCCCceEEEEeH
Q 039385 93 HRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~ 110 (126)
.-=|++|.+|+++||+|.
T Consensus 172 SGGPlv~~~G~vvGI~s~ 189 (332)
T 3num_A 172 AGGPLVNLDGEVIGINTL 189 (332)
T ss_dssp TTSEEEETTSCEEEEEEE
T ss_pred cHHHhhCCCCcEEEEEee
Confidence 334899888999999874
No 152
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=49.67 E-value=16 Score=21.37 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=33.3
Q ss_pred eEEEeCCCC---HHHHHHHHHhcCCCEEEEEcCCCce------EEEEeHHHHHHHHHHhh
Q 039385 71 LLTCQVDSP---LSEVIGKALTKHVHRVWVVDQQRLL------LGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 71 ~~~v~~~~~---l~~~~~~m~~~~~~~lpVvd~~~~l------vGivs~~dil~~~~~~~ 121 (126)
++.+..+.. -.++.+.+.-.++..+.++|.+|++ .|..+..++.+.+....
T Consensus 68 ~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 68 LLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp EEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred EEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 345555432 3445555555667788889878865 48889999988876543
No 153
>1div_A Ribosomal protein L9; rRNA-binding; 2.60A {Geobacillus stearothermophilus} SCOP: d.99.1.1 d.100.1.1 PDB: 1giy_K 1yl3_K 2b66_I 2b9n_I 2b9p_I 487d_K
Probab=48.67 E-value=19 Score=22.32 Aligned_cols=23 Identities=13% Similarity=0.245 Sum_probs=19.9
Q ss_pred cCCCceEEEEeHHHHHHHHHHhh
Q 039385 99 DQQRLLLGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 99 d~~~~lvGivs~~dil~~~~~~~ 121 (126)
+++|++.|-||..||...+....
T Consensus 84 g~~gklfGSVt~~dIa~al~~~~ 106 (149)
T 1div_A 84 GEGGRLFGSITSKQIAESLQAQH 106 (149)
T ss_dssp CGGGEEEEEECHHHHHHHHHHHH
T ss_pred CCCCcEEeecCHHHHHHHHHHhh
Confidence 56789999999999999998653
No 154
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=48.50 E-value=9.5 Score=25.34 Aligned_cols=20 Identities=5% Similarity=0.008 Sum_probs=15.4
Q ss_pred CCCEEEEEcCCCceEEEEeH
Q 039385 91 HVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~ 110 (126)
+-.-=|++|.+|+++||+|.
T Consensus 181 G~SGGPLv~~~G~vvGI~s~ 200 (239)
T 1l1j_A 181 GNSGGPLLNIHGEVIGINTA 200 (239)
T ss_dssp TTTTSEEECSSSEEEEEECC
T ss_pred CCccHHhccCCCeEEEEEee
Confidence 34445889888999999874
No 155
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=48.25 E-value=11 Score=26.36 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=16.6
Q ss_pred cCCCEEEEEcCCCceEEEEeH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+-.-=|++|.+|+++||+|.
T Consensus 177 ~G~SGGPLvn~~G~vvGI~s~ 197 (348)
T 3qo6_A 177 PGNSGGPLLDSSGTLIGINTA 197 (348)
T ss_dssp TTCTTCEEECTTSCEEEEEEE
T ss_pred CCCcHHHhhCCCCeEEEEEEe
Confidence 345566899989999999875
No 156
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=47.47 E-value=39 Score=20.57 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=22.8
Q ss_pred CEEEEEcCCCceEEE-----EeHHHHHHHHHHhhh
Q 039385 93 HRVWVVDQQRLLLGL-----VSLTDMIRVLRTSIL 122 (126)
Q Consensus 93 ~~lpVvd~~~~lvGi-----vs~~dil~~~~~~~~ 122 (126)
..+.|+|.+|+++++ .+..++.+.+.+...
T Consensus 128 ~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 128 NVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp CEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred ceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 467899999999987 456777777776654
No 157
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=47.35 E-value=15 Score=22.94 Aligned_cols=22 Identities=5% Similarity=0.113 Sum_probs=18.7
Q ss_pred CCCCceeeEeeCCCceeEEEeec
Q 039385 6 KPNVERNSISLGNGWRLIGTFSA 28 (126)
Q Consensus 6 ~~~~~~~pVvd~~~~~l~G~is~ 28 (126)
..+-+.-|++|.++ +++|+.+.
T Consensus 123 ~pGnSGGPl~n~~G-~VVGI~~~ 144 (163)
T 2w5e_A 123 QDGMSGAPVCDKYC-RVLAVHQT 144 (163)
T ss_dssp SSCCTTCEEECTTS-CEEEEEEE
T ss_pred CCCCchhhEEcCCC-EEEEEEcc
Confidence 46778899999887 99999874
No 158
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=47.10 E-value=12 Score=25.94 Aligned_cols=20 Identities=10% Similarity=0.074 Sum_probs=15.6
Q ss_pred CCCEEEEEcCCCceEEEEeH
Q 039385 91 HVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~ 110 (126)
+-.-=|++|.+|+++||++.
T Consensus 171 G~SGGPl~~~~G~vVGI~s~ 190 (325)
T 1lcy_A 171 GNAGGPLVNLDGEVIGVNTM 190 (325)
T ss_dssp TTTTSEEEETTSCEEEEEEE
T ss_pred CCccccEECCCCEEEEEEeE
Confidence 34445899989999999874
No 159
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=46.92 E-value=13 Score=25.70 Aligned_cols=19 Identities=21% Similarity=0.202 Sum_probs=15.1
Q ss_pred CCEEEEEcCCCceEEEEeH
Q 039385 92 VHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~ 110 (126)
-.-=|++|.+|+++||++.
T Consensus 164 ~SGGPl~~~~G~vvGI~s~ 182 (318)
T 1te0_A 164 NSGGALVNSLGELMGINTL 182 (318)
T ss_dssp TTTSEEECTTCCEEEEEEC
T ss_pred CCcCceECCCCeEEEEEee
Confidence 3445899988999999874
No 160
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=45.47 E-value=14 Score=24.95 Aligned_cols=18 Identities=11% Similarity=0.067 Sum_probs=14.3
Q ss_pred CEEEEEcCCCceEEEEeH
Q 039385 93 HRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~ 110 (126)
.-=|+++.+++++||+|.
T Consensus 169 SGGPLv~~~g~lvGIvS~ 186 (274)
T 2o8l_A 169 SGSPVFNEKNEVIGIHWG 186 (274)
T ss_dssp TTCEEECTTSCEEEEEEE
T ss_pred chhheeccCCeEEEEEeC
Confidence 444888878899999985
No 161
>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A
Probab=44.84 E-value=9 Score=23.59 Aligned_cols=31 Identities=3% Similarity=0.006 Sum_probs=20.8
Q ss_pred CHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 79 PLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 79 ~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
...+.++.+ .+...++|-.++|+++|+++..
T Consensus 23 ~~~~~L~~~--~~~~~~fVAe~~g~ivG~v~l~ 53 (141)
T 2d4p_A 23 VSLGALRFF--ARTGHSFLAEEGEEPMGFALAQ 53 (141)
T ss_dssp CCHHHHHHH--HHHSCCEEEEETTEEEEEEEEE
T ss_pred chHHHHHhc--CCCCeEEEEEECCEEEEEEeee
Confidence 445666767 3445566666679999987754
No 162
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=44.82 E-value=14 Score=25.99 Aligned_cols=21 Identities=10% Similarity=0.104 Sum_probs=16.3
Q ss_pred cCCCEEEEEcCCCceEEEEeH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+..-=|++|.+|+++||.|.
T Consensus 184 ~GnSGGPLvn~~G~vVGI~s~ 204 (345)
T 3stj_A 184 RGNSGGALLNLNGELIGINTA 204 (345)
T ss_dssp TTCTTCEEECTTSCEEEEEEE
T ss_pred CCcCccceeCCCCEEEEEEec
Confidence 344556999999999999764
No 163
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=43.76 E-value=28 Score=19.65 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=25.6
Q ss_pred HHHHhcCCCEEEEEcCCCce---EEEEeHHHHHHHHHHhh
Q 039385 85 GKALTKHVHRVWVVDQQRLL---LGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 85 ~~m~~~~~~~lpVvd~~~~l---vGivs~~dil~~~~~~~ 121 (126)
+.+.-..+..+.++|.+|++ .|..+..++.+.+.+.+
T Consensus 95 ~~~~i~~~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 95 ANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC
T ss_pred HHcCCCCCceEEEECCCCCEEEEecCCCHHHHHHHHHHHh
Confidence 33444566788899988876 56677888877776543
No 164
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=43.30 E-value=14 Score=25.49 Aligned_cols=20 Identities=20% Similarity=0.105 Sum_probs=15.7
Q ss_pred CCCEEEEEcCCCceEEEEeH
Q 039385 91 HVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~ 110 (126)
+-.-=|++|.+|+++||++.
T Consensus 167 G~SGGPlv~~~G~vvGI~s~ 186 (324)
T 1y8t_A 167 GNSGGALVNMNAQLVGVNSA 186 (324)
T ss_dssp TCTTEEEECTTSEEEEEEEE
T ss_pred CCccCcEECCCCeEEEEEee
Confidence 34456899888999999874
No 165
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=43.29 E-value=17 Score=22.18 Aligned_cols=19 Identities=11% Similarity=0.083 Sum_probs=14.5
Q ss_pred cCCCEEEEEcCCCceEEEE
Q 039385 90 KHVHRVWVVDQQRLLLGLV 108 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGiv 108 (126)
.+=.--|++|..|++++||
T Consensus 106 ~GdSGrPi~Dn~GrVVaIV 124 (158)
T 4agk_A 106 PGDSGRPILDNSGKVVAIV 124 (158)
T ss_dssp TTCTTCEEECTTSCEEEEE
T ss_pred CCCCCCccccCCCCEEEEE
Confidence 3344568999999999887
No 166
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=42.47 E-value=28 Score=20.33 Aligned_cols=41 Identities=12% Similarity=0.047 Sum_probs=28.7
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceE----EEEeHHHHHHHHHHhhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLL----GLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lv----Givs~~dil~~~~~~~~ 122 (126)
++.+.+.-..+..+.++|.+|+++ |..+..++.+.+.+.+.
T Consensus 97 ~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 97 AVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp HHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 344455556788999999888764 55677788877776554
No 167
>3zxu_A MCM21; cell cycle, COMA complex, protein complex, cell division; 3.70A {Kluyveromyces lactis}
Probab=41.68 E-value=9.1 Score=26.48 Aligned_cols=18 Identities=17% Similarity=0.202 Sum_probs=15.9
Q ss_pred CCCceeeEeeCCCceeEEE
Q 039385 7 PNVERNSISLGNGWRLIGT 25 (126)
Q Consensus 7 ~~~~~~pVvd~~~~~l~G~ 25 (126)
.+++++|+.|+.+ .++|+
T Consensus 123 fGITaFPv~DP~~-~lLGI 140 (296)
T 3zxu_A 123 IGVSLFPVNYDNI-EFMGI 140 (296)
T ss_dssp TSEEEEEEECSSB-EEEEE
T ss_pred hcceeeeeeCCCC-CeEEE
Confidence 5999999999966 89997
No 168
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=41.23 E-value=25 Score=17.75 Aligned_cols=47 Identities=9% Similarity=-0.052 Sum_probs=27.2
Q ss_pred ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 70 ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 70 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
++..+.-+.. .+..+.+...++..+|++-.+|+.+|=.+..++.+.+
T Consensus 27 ~~~~~di~~~-~~~~~~~~~~~~~~vP~l~~~g~~~~g~~~~~l~~~l 73 (75)
T 1r7h_A 27 AYNTVDISLD-DEARDYVMALGYVQAPVVEVDGEHWSGFRPERIKQLQ 73 (75)
T ss_dssp CCEEEETTTC-HHHHHHHHHTTCBCCCEEEETTEEEESCCHHHHHHHH
T ss_pred CcEEEECCCC-HHHHHHHHHcCCCccCEEEECCeEEcCCCHHHHHHHH
Confidence 3344444433 2333445567888899875467776656766655443
No 169
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=41.11 E-value=18 Score=24.31 Aligned_cols=16 Identities=13% Similarity=0.100 Sum_probs=13.1
Q ss_pred EEEEcCCCceEEEEeH
Q 039385 95 VWVVDQQRLLLGLVSL 110 (126)
Q Consensus 95 lpVvd~~~~lvGivs~ 110 (126)
=|+++.+++++||+|.
T Consensus 171 GPLv~~~g~lvGIvS~ 186 (268)
T 1wcz_A 171 SPVFNEKNEVIGIHWG 186 (268)
T ss_dssp CEEECTTSCEEEEEEE
T ss_pred CeEEccCCEEEEEEeC
Confidence 3788777899999985
No 170
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=40.79 E-value=17 Score=23.68 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=13.7
Q ss_pred CEEEEEcCCCceEEEEeH
Q 039385 93 HRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~ 110 (126)
.-=||+|++ +++||.|-
T Consensus 114 SGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 114 SGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp TTCEEEETT-EEEEEEEE
T ss_pred CCCccccCC-eEEEEEec
Confidence 445899977 99999885
No 171
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=40.63 E-value=20 Score=21.97 Aligned_cols=16 Identities=13% Similarity=0.181 Sum_probs=12.7
Q ss_pred CEEEEEcCCCceEEEE
Q 039385 93 HRVWVVDQQRLLLGLV 108 (126)
Q Consensus 93 ~~lpVvd~~~~lvGiv 108 (126)
.-=|++|..|++++||
T Consensus 110 SGRpI~DN~GrVVaiv 125 (161)
T 1svp_A 110 AGRPIMDNSGRVVAIV 125 (161)
T ss_dssp TTCEEECTTSCEEEEE
T ss_pred CCCccCcCCCcEEEEE
Confidence 3458899889998887
No 172
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=40.48 E-value=20 Score=21.57 Aligned_cols=17 Identities=12% Similarity=0.122 Sum_probs=13.3
Q ss_pred CCEEEEEcCCCceEEEE
Q 039385 92 VHRVWVVDQQRLLLGLV 108 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGiv 108 (126)
=.--|++|..|++++||
T Consensus 100 dSGrpI~Dn~GrVVaIV 116 (149)
T 1vcp_A 100 DSGRPIFDNKGRVVAIV 116 (149)
T ss_dssp CTTCEEECTTSCEEEEE
T ss_pred CCCCccCcCCCcEEEEE
Confidence 34458999889999887
No 173
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=39.98 E-value=43 Score=19.58 Aligned_cols=43 Identities=7% Similarity=-0.089 Sum_probs=27.7
Q ss_pred CHHHHHHHHH--hcCCCEEEEEcCCCceE----EEEeHHHHHHHHHHhh
Q 039385 79 PLSEVIGKAL--TKHVHRVWVVDQQRLLL----GLVSLTDMIRVLRTSI 121 (126)
Q Consensus 79 ~l~~~~~~m~--~~~~~~lpVvd~~~~lv----Givs~~dil~~~~~~~ 121 (126)
...++.+.+. -..+....++|.+|+++ |..+..++.+.+.+..
T Consensus 91 ~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~ 139 (151)
T 3raz_A 91 NSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAH 139 (151)
T ss_dssp CHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHH
T ss_pred chHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3344444444 45677888999999764 5567777777765543
No 174
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=39.61 E-value=48 Score=20.47 Aligned_cols=22 Identities=14% Similarity=0.329 Sum_probs=19.1
Q ss_pred cCCCceEEEEeHHHHHHHHHHh
Q 039385 99 DQQRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 99 d~~~~lvGivs~~dil~~~~~~ 120 (126)
.++|++.|-||..||...+...
T Consensus 85 g~~gklfGSVt~~dIa~al~~~ 106 (149)
T 3r8s_H 85 GDEGKLFGSIGTRDIADAVTAA 106 (149)
T ss_dssp CTTSEEEEEECHHHHHHHHHTT
T ss_pred CCCCceEcccCHHHHHHHHHHc
Confidence 5688999999999999998653
No 175
>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*
Probab=39.07 E-value=46 Score=19.48 Aligned_cols=23 Identities=9% Similarity=0.359 Sum_probs=16.1
Q ss_pred hcCCCEEEEEcCCCceEEEEeHH
Q 039385 89 TKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 89 ~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
......+.|.+++++++|.+...
T Consensus 43 ~~~~~~~~~~~~~~~~vG~~~~~ 65 (160)
T 1qst_A 43 DRHHESMVILKNKQKVIGGICFR 65 (160)
T ss_dssp SSSEEEEEEEETTTEEEEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEEEE
Confidence 34445566777788999998753
No 176
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=38.62 E-value=52 Score=18.34 Aligned_cols=37 Identities=8% Similarity=0.151 Sum_probs=24.9
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEE----EeHHHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGL----VSLTDMIRVLRT 119 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGi----vs~~dil~~~~~ 119 (126)
+.+.+.-.++..+.++|.+|++++. .+..++.+.+.+
T Consensus 96 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 96 LLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp HHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 4444555677889999999977544 466666666543
No 177
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=38.23 E-value=62 Score=19.15 Aligned_cols=31 Identities=19% Similarity=0.440 Sum_probs=22.3
Q ss_pred cCCCEEEEEcCCCceE--EEE-eHHHHHHHHHHh
Q 039385 90 KHVHRVWVVDQQRLLL--GLV-SLTDMIRVLRTS 120 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lv--Giv-s~~dil~~~~~~ 120 (126)
..+..+.++|.+|+++ |.. +..++.+.+.+.
T Consensus 129 ~~~P~~~lid~~G~i~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 129 RSIDYIVIMDKSSNVLYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp CSSSEEEEEETTCCEEEEEESCCHHHHHHHHHHC
T ss_pred CCceEEEEEcCCCcEEEeCCCCCHHHHHHHHHHH
Confidence 4567888999999776 566 677777766553
No 178
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=38.11 E-value=16 Score=20.03 Aligned_cols=46 Identities=11% Similarity=0.005 Sum_probs=28.3
Q ss_pred eEEEeCCCCHHHHHHHHHhcCCCEEEEEc-CCCceE-EEEeHHHHHHHHHHhh
Q 039385 71 LLTCQVDSPLSEVIGKALTKHVHRVWVVD-QQRLLL-GLVSLTDMIRVLRTSI 121 (126)
Q Consensus 71 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~~~~lv-Givs~~dil~~~~~~~ 121 (126)
+..++-+..- ++... .++. +|++- .+|+.+ |-.+...|.+.+.+..
T Consensus 29 ~~~vdid~~~-~l~~~---~g~~-vPtl~~~~G~~v~g~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 29 FFSVFIDDDA-ALESA---YGLR-VPVLRDPMGRELDWPFDAPRLRAWLDAAP 76 (87)
T ss_dssp EEEEECTTCH-HHHHH---HTTT-CSEEECTTCCEEESCCCHHHHHHHHHTCC
T ss_pred eEEEECCCCH-HHHHH---hCCC-cCeEEEECCEEEeCCCCHHHHHHHHHHHH
Confidence 3445555432 33333 3555 77776 678777 6788888888776544
No 179
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=38.11 E-value=23 Score=21.60 Aligned_cols=16 Identities=19% Similarity=0.250 Sum_probs=12.9
Q ss_pred CEEEEEcCCCceEEEE
Q 039385 93 HRVWVVDQQRLLLGLV 108 (126)
Q Consensus 93 ~~lpVvd~~~~lvGiv 108 (126)
.--|++|..|++++||
T Consensus 108 SGrpI~Dn~GrVVaIV 123 (157)
T 1ep5_B 108 SGRPILDNQGRVVAIV 123 (157)
T ss_dssp TTCEEECTTSCEEEEE
T ss_pred CCCccCcCCCcEEEEE
Confidence 4458999889999887
No 180
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=37.93 E-value=60 Score=18.89 Aligned_cols=37 Identities=8% Similarity=0.053 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEE-eHHHHHHHHH
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLV-SLTDMIRVLR 118 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGiv-s~~dil~~~~ 118 (126)
++.+.+.-..+....++|.+|++++.. +..++.+.+.
T Consensus 107 ~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~l~~~l~ 144 (150)
T 3fw2_A 107 EVAKQYSIYKIPANILLSSDGKILAKNLRGEELKKKIE 144 (150)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEESCCHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEECCCCEEEEccCCHHHHHHHHH
Confidence 344444445677889999999988765 4444444443
No 181
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=37.83 E-value=48 Score=18.73 Aligned_cols=27 Identities=11% Similarity=0.208 Sum_probs=17.8
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
+..+.......+.|...+|+++|.+..
T Consensus 42 ~~~~~~~~~~~~~v~~~~~~~vG~~~~ 68 (150)
T 3t9y_A 42 LKKITNHDDYFLLLLIKENKIIGLSGM 68 (150)
T ss_dssp HHHHHTSTTEEEEEEEETTEEEEEEEE
T ss_pred HHHhhcCCceEEEEEEECCEEEEEEEE
Confidence 333444455566676668999999864
No 182
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=37.42 E-value=51 Score=19.10 Aligned_cols=28 Identities=11% Similarity=0.151 Sum_probs=17.5
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
+..+....-..+.|...+|+++|.++..
T Consensus 42 ~~~~~~~~~~~~~v~~~~~~~vG~~~~~ 69 (150)
T 2dxq_A 42 FAAMLAQPGLTIFVATENGKPVATATLL 69 (150)
T ss_dssp HHHHHHSTTEEEEEEEETTEEEEEEEEE
T ss_pred HHHHhcCCCceEEEEecCCEEEEEEEEE
Confidence 3334444344566665578999998863
No 183
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=37.34 E-value=58 Score=19.13 Aligned_cols=40 Identities=3% Similarity=-0.016 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEE----EEeHHHHHHHHHHhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLG----LVSLTDMIRVLRTSI 121 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvG----ivs~~dil~~~~~~~ 121 (126)
++.+.+.-..+..+.++|.+|++++ ..+..++.+.+.+..
T Consensus 112 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 112 TIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp HHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred HHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4445555567888999998997765 467777777766543
No 184
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=37.25 E-value=66 Score=19.14 Aligned_cols=41 Identities=7% Similarity=0.124 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEE---EE--eHHHHHHHHHHhh
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLG---LV--SLTDMIRVLRTSI 121 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvG---iv--s~~dil~~~~~~~ 121 (126)
.++.+.+.-.++..+.++|.+|++++ .. +..++.+.+...+
T Consensus 106 ~~l~~~~~v~~~Pt~~~~d~~G~~~~~~G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 106 QELKAQYKVTGFPELVFIDAEGKQLARMGFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCEEEEECCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 34555566677888999998897765 44 6777777776544
No 185
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=37.05 E-value=59 Score=18.57 Aligned_cols=39 Identities=8% Similarity=-0.034 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEE-eHHHHHHHHHHh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLV-SLTDMIRVLRTS 120 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGiv-s~~dil~~~~~~ 120 (126)
++...+.-..+..+.++|.+|++++.. +..++.+.+.+.
T Consensus 105 ~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~l~~~l~~l 144 (148)
T 3fkf_A 105 ETAKQYAILTLPTNILLSPTGKILARDIQGEALTGKLKEL 144 (148)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEESCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 444555556778888999999988765 445555555443
No 186
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=36.76 E-value=30 Score=21.81 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=13.3
Q ss_pred CCCceeeEeeCCCceeEEE
Q 039385 7 PNVERNSISLGNGWRLIGT 25 (126)
Q Consensus 7 ~~~~~~pVvd~~~~~l~G~ 25 (126)
..+..+.++|.+| +++..
T Consensus 68 ~~~~~i~i~d~~G-~~~~~ 85 (217)
T 4dah_A 68 PRFSGLYFLNAKG-DVTAS 85 (217)
T ss_dssp TTEEEEEEEETTC-BEEEE
T ss_pred CcccEEEEECCCC-cEEEe
Confidence 4577889999988 66543
No 187
>1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1
Probab=36.46 E-value=67 Score=19.04 Aligned_cols=25 Identities=8% Similarity=0.145 Sum_probs=16.0
Q ss_pred HHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 87 ALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 87 m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
+.+.....+.|...+|+++|.++..
T Consensus 42 ~~~~~~~~~~v~~~~~~ivG~~~~~ 66 (164)
T 1ygh_A 42 VYDRSHLSMAVIRKPLTVVGGITYR 66 (164)
T ss_dssp HHCTTCEEEEEEETTTEEEEEEEEE
T ss_pred hhCCCceEEEEECCCCEEEEEEEEE
Confidence 3334344446666689999998753
No 188
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=35.65 E-value=49 Score=18.65 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=32.9
Q ss_pred ceEEEeCCCC-HHHHHHHHHhcCCCEEEEEcCCCce----EEEEeHHHHHHHHHHhh
Q 039385 70 ELLTCQVDSP-LSEVIGKALTKHVHRVWVVDQQRLL----LGLVSLTDMIRVLRTSI 121 (126)
Q Consensus 70 ~~~~v~~~~~-l~~~~~~m~~~~~~~lpVvd~~~~l----vGivs~~dil~~~~~~~ 121 (126)
.++.+..+.. -.++.+.+.-..+..+.+++.+|++ .|..+..++.+.+.+..
T Consensus 60 ~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 60 NIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp EEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 3455552122 2445555666677888889877765 46677888888776654
No 189
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Probab=35.59 E-value=56 Score=18.61 Aligned_cols=28 Identities=7% Similarity=0.398 Sum_probs=17.6
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+.......-..+.|..++|+++|.+..
T Consensus 41 ~~~~~~~~~~~~~~v~~~~~~ivG~~~~ 68 (157)
T 3mgd_A 41 YFNNKLANNLLVEWIAEENNQIIATAAI 68 (157)
T ss_dssp HHHHHHHTTSEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCceEEEEEEECCEEEEEEEE
Confidence 3333344444555666568999999864
No 190
>2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum}
Probab=35.32 E-value=53 Score=21.15 Aligned_cols=29 Identities=17% Similarity=0.277 Sum_probs=20.2
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
+.+..+....-..+.|...+|+++|.++.
T Consensus 50 ~~l~~~~~~~~~~~~vA~~dg~iVG~~~l 78 (211)
T 2q04_A 50 EALVEIAALEEGRIIIARQGNDIIGYVTF 78 (211)
T ss_dssp HHHHHHHTSSSCEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEEEECCEEEEEEEE
Confidence 44555555556677777668999999875
No 191
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=34.60 E-value=82 Score=19.47 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=22.4
Q ss_pred CCCEEEEEcCCCceEEEE--------eHHHHHHHHHHh
Q 039385 91 HVHRVWVVDQQRLLLGLV--------SLTDMIRVLRTS 120 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGiv--------s~~dil~~~~~~ 120 (126)
.+....|+|.+|+++... +..++++.+...
T Consensus 131 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 131 ADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp BCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred ccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 567888999999888776 456777776554
No 192
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=34.04 E-value=69 Score=18.43 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=18.7
Q ss_pred HHHHHHHhc-CCCEEEEEcC--CCceEEEEeHH
Q 039385 82 EVIGKALTK-HVHRVWVVDQ--QRLLLGLVSLT 111 (126)
Q Consensus 82 ~~~~~m~~~-~~~~lpVvd~--~~~lvGivs~~ 111 (126)
+.+..+... ....+.|..+ +|+++|.+...
T Consensus 56 ~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~ 88 (165)
T 4ag7_A 56 KRFEAMRTSVPNYHIVVIEDSNSQKVVASASLV 88 (165)
T ss_dssp HHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEE
T ss_pred HHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEE
Confidence 333444443 5556666654 89999998863
No 193
>2hje_A Autoinducer 2 sensor kinase/phosphatase LUXQ; PER/ARNT/simple-minded (PAS) fold, autoinducer-2 (AI-2), quorum sensing, histidine sensor kinase; 1.70A {Vibrio harveyi} SCOP: d.110.6.3 PDB: 2hj9_C 1zhh_B*
Probab=34.03 E-value=29 Score=23.05 Aligned_cols=26 Identities=15% Similarity=-0.018 Sum_probs=21.1
Q ss_pred CceeeEeeCCCceeEEEeeccccccC
Q 039385 9 VERNSISLGNGWRLIGTFSASDLRGC 34 (126)
Q Consensus 9 ~~~~pVvd~~~~~l~G~is~~dl~~~ 34 (126)
++..||+|..+|+++|.+-.+=+..-
T Consensus 119 vRR~pIi~~~tGeVlG~Ly~gvVLnn 144 (221)
T 2hje_A 119 VRRVPILDPSTGEVLGFSFNAVVLDN 144 (221)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEECTT
T ss_pred EEccceecCCCCcEEEEEEEEEEecC
Confidence 46789999999999999877766543
No 194
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=33.78 E-value=59 Score=18.75 Aligned_cols=24 Identities=17% Similarity=0.360 Sum_probs=17.1
Q ss_pred HHhcCCCEEEEEcCCCceEEEEeH
Q 039385 87 ALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 87 m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
.....-..+.|...+|+++|.+..
T Consensus 50 ~~~~~~~~~~v~~~~~~~vG~~~~ 73 (166)
T 3jvn_A 50 YLDDPECMVYVAEMDDVIIGFITG 73 (166)
T ss_dssp HHHCTTEEEEEEESSSSEEEEEEE
T ss_pred HhcCCCcEEEEEEECCEEEEEEEE
Confidence 334555567777778999999874
No 195
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=33.59 E-value=56 Score=17.22 Aligned_cols=34 Identities=6% Similarity=-0.164 Sum_probs=25.2
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEe
Q 039385 76 VDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVS 109 (126)
Q Consensus 76 ~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs 109 (126)
+-.+++||+..|...+...+.-.|.+..-+.+|-
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~~nVVY 44 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVY 44 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTEEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCCEEEEE
Confidence 4568999999998888888877876544444443
No 196
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=33.40 E-value=59 Score=18.66 Aligned_cols=28 Identities=7% Similarity=0.172 Sum_probs=17.8
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+..+....-..+.|...+|+++|.+..
T Consensus 45 ~~~~~~~~~~~~~~va~~~~~ivG~~~~ 72 (153)
T 1z4e_A 45 AFKEIKKDKNNELIVACNGEEIVGMLQV 72 (153)
T ss_dssp HHHHHHHCTTEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHcCCCeeEEEEecCCcEEEEEEE
Confidence 3444444444556676667899998864
No 197
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=33.25 E-value=65 Score=18.54 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=18.8
Q ss_pred HHHHHHHhcC-CCEEEEEcCCCceEEEEeH
Q 039385 82 EVIGKALTKH-VHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 82 ~~~~~m~~~~-~~~lpVvd~~~~lvGivs~ 110 (126)
+.+..+.... ...+.|...+|+++|.+..
T Consensus 54 ~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~ 83 (161)
T 3i3g_A 54 NIADMRRRAGIVTKVFCHQPTGRIVGSASL 83 (161)
T ss_dssp HHHHHHHHTTCEEEEEEETTTTEEEEEEEE
T ss_pred HHHHHHhhcCCceEEEEEEcCCCeEEEEEE
Confidence 3333444443 4566677778999998875
No 198
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=33.02 E-value=67 Score=17.99 Aligned_cols=27 Identities=22% Similarity=0.402 Sum_probs=17.6
Q ss_pred HHHHHhcCCCEEEEEcC--CCceEEEEeH
Q 039385 84 IGKALTKHVHRVWVVDQ--QRLLLGLVSL 110 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~--~~~lvGivs~ 110 (126)
+..........+.|+.. +|+++|.+..
T Consensus 38 ~~~~~~~~~~~~~v~~~~~~~~~vG~~~~ 66 (153)
T 2eui_A 38 LEKRLRRKESVIYLALADEEDRLLGFCQL 66 (153)
T ss_dssp HHHHHHHTCSEEEEEECSSSCCEEEEEEE
T ss_pred HHHHhcCCCCeEEEEEecCCCcEEEEEEE
Confidence 33334444455667666 7999999875
No 199
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=32.80 E-value=76 Score=18.58 Aligned_cols=28 Identities=7% Similarity=0.214 Sum_probs=19.4
Q ss_pred EEEEEcCCCceEEEE----eHHHHHHHHHHhh
Q 039385 94 RVWVVDQQRLLLGLV----SLTDMIRVLRTSI 121 (126)
Q Consensus 94 ~lpVvd~~~~lvGiv----s~~dil~~~~~~~ 121 (126)
...++|.+|++++.. +..++.+.+.+.+
T Consensus 129 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 129 IMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp EEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred eEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 466789999888774 5566666665543
No 200
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=32.71 E-value=50 Score=19.35 Aligned_cols=41 Identities=12% Similarity=-0.012 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEE----EEeHHHHHHHHHHhhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLG----LVSLTDMIRVLRTSIL 122 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvG----ivs~~dil~~~~~~~~ 122 (126)
++.+.+.-.++....++|.+|+++. ..+..++.+.+.+.+.
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 3444455566778889999997654 5577777777665543
No 201
>1nkw_F 50S ribosomal protein L9; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_F* 1nwy_F* 1sm1_F* 1xbp_F* 1pnu_F 1pny_F 1vor_I 1vou_I 1vow_I 1voy_I 1vp0_I
Probab=32.46 E-value=56 Score=20.10 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.9
Q ss_pred CCceEEEEeHHHHHHHHHHh
Q 039385 101 QRLLLGLVSLTDMIRVLRTS 120 (126)
Q Consensus 101 ~~~lvGivs~~dil~~~~~~ 120 (126)
+|++.|-||..||...+...
T Consensus 84 ~gklfGSVt~~dIa~al~~~ 103 (146)
T 1nkw_F 84 EGKIYGAVTHQDVANSLDQL 103 (146)
T ss_pred CCceeeccCHHHHHHHHHHc
Confidence 68999999999999998754
No 202
>4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti}
Probab=32.42 E-value=91 Score=19.95 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=18.5
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
+.+....+.+...+.+.+++|+++|++..
T Consensus 76 ~~~~~~~~~~~~~va~~~~~g~IVG~a~~ 104 (238)
T 4fd7_A 76 ALWKAMLPDRMSLVCFREGSDEIVGVNIL 104 (238)
T ss_dssp HHHHHHGGGSCCEEEEETTCCSEEEEEEE
T ss_pred HHHHHHHhCCcEEEEEECCCCcEEEEEEe
Confidence 33444556677666555557899998753
No 203
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=32.18 E-value=54 Score=16.69 Aligned_cols=34 Identities=9% Similarity=-0.182 Sum_probs=24.9
Q ss_pred eCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEE
Q 039385 75 QVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLV 108 (126)
Q Consensus 75 ~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGiv 108 (126)
-+-.++++|+..|...+...+.-.|.+..-+.+|
T Consensus 10 ~kpmsveEAv~qmel~gh~F~vF~n~~t~~~nVv 43 (57)
T 3k2t_A 10 LKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIV 43 (57)
T ss_dssp -CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEE
Confidence 3567899999999988888888888654334444
No 204
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=32.13 E-value=66 Score=19.67 Aligned_cols=38 Identities=8% Similarity=-0.025 Sum_probs=25.1
Q ss_pred HHHHhcCCCEEEEEcCCCceEEE-------------EeHHHHHHHHHHhhh
Q 039385 85 GKALTKHVHRVWVVDQQRLLLGL-------------VSLTDMIRVLRTSIL 122 (126)
Q Consensus 85 ~~m~~~~~~~lpVvd~~~~lvGi-------------vs~~dil~~~~~~~~ 122 (126)
+.+.-..+....++|.+|+++.. .+..++.+.+.+.+.
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 33433445667789999988754 477778777766543
No 205
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1
Probab=31.98 E-value=62 Score=18.66 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=19.4
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
.+.+..+.+.....+.|...+++++|.+...
T Consensus 64 ~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~ 94 (168)
T 1bo4_A 64 SDYLGNLLRSKTFIALAAFDQEAVVGALAAY 94 (168)
T ss_dssp HHHHHHHHHSSSEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEEECCeEEEEEEEE
Confidence 3444445555555566665589999988753
No 206
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=31.97 E-value=97 Score=19.99 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCceEEEEe--------HHHHHHHHHHhh
Q 039385 92 VHRVWVVDQQRLLLGLVS--------LTDMIRVLRTSI 121 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs--------~~dil~~~~~~~ 121 (126)
...+.|+|.+|++..+.. ..++++.+....
T Consensus 131 ~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 131 ARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp CCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred ceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 678999999999988873 567777765543
No 207
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=31.15 E-value=35 Score=21.89 Aligned_cols=22 Identities=9% Similarity=-0.112 Sum_probs=15.9
Q ss_pred cCCCEEEEEcCCCceEEEEeHH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~~ 111 (126)
.+=.-=|++|.+++++||+|..
T Consensus 140 ~GDSGGPl~~~~g~~vGI~s~~ 161 (198)
T 2h5c_A 140 RGDSGGSWITSAGQAQGVMSGG 161 (198)
T ss_dssp TTCTTCEEECTTCBEEEEEEEE
T ss_pred CCcceeEEEeeCCEEEEEEEee
Confidence 3444458897788999999853
No 208
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=30.97 E-value=72 Score=18.48 Aligned_cols=28 Identities=7% Similarity=0.121 Sum_probs=18.0
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
+.......-..+.|...+|+++|.+...
T Consensus 54 ~~~~~~~~~~~~~v~~~~~~ivG~~~~~ 81 (165)
T 1s3z_A 54 GEEILQADHLASFIAMADGVAIGFADAS 81 (165)
T ss_dssp HHHHHHCSSEEEEEEEETTEEEEEEEEE
T ss_pred HHHHhcCCCceEEEEEECCEEEEEEEEE
Confidence 3444444445566666689999998754
No 209
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=30.88 E-value=23 Score=19.01 Aligned_cols=32 Identities=13% Similarity=-0.090 Sum_probs=22.6
Q ss_pred HHhcCCCEEEEEcCCCceEEEEeHHHHHHHHH
Q 039385 87 ALTKHVHRVWVVDQQRLLLGLVSLTDMIRVLR 118 (126)
Q Consensus 87 m~~~~~~~lpVvd~~~~lvGivs~~dil~~~~ 118 (126)
...++...+|++--+|+.+|=.+...+.+.+.
T Consensus 60 ~~~~g~~~vP~l~~~g~~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 60 HSISGSYSVPVVVKGDKHVLGYNEEKLKELIR 91 (92)
T ss_dssp HHHHSSSCSCEEEETTEEEESCCHHHHHHHHH
T ss_pred HHhcCCCCcCEEEECCEEEeCCCHHHHHHHhc
Confidence 34567788888755777777778887777653
No 210
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=30.68 E-value=77 Score=21.10 Aligned_cols=30 Identities=17% Similarity=0.507 Sum_probs=22.9
Q ss_pred CCCEEEEEcCCCceEEEE--------eHHHHHHHHHHh
Q 039385 91 HVHRVWVVDQQRLLLGLV--------SLTDMIRVLRTS 120 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGiv--------s~~dil~~~~~~ 120 (126)
.+..+.|+|.+|+++... +..++++.+...
T Consensus 123 ~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 123 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp CCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 567788999999988875 367788777554
No 211
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=30.67 E-value=53 Score=18.92 Aligned_cols=52 Identities=8% Similarity=0.168 Sum_probs=33.9
Q ss_pred ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCce---EEEEeHHHHHHHHHHhhh
Q 039385 70 ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLL---LGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 70 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~l---vGivs~~dil~~~~~~~~ 122 (126)
.+..+..+.. .++.+.+.-..+..+.++|.+|+. .|..+..++.+.+.+...
T Consensus 72 ~~~~vd~~~~-~~l~~~~~v~~~Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~ 126 (136)
T 2l5l_A 72 VIYKVDTEKE-QELAGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLL 126 (136)
T ss_dssp EEEEEETTTC-HHHHHHTTCCSSCEEEEECSSSCCEEEESCCCHHHHHHHHHHHHT
T ss_pred EEEEEeCCCC-HHHHHHcCCCCCCEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhh
Confidence 3455555544 345555555667777788777765 677788888888776543
No 212
>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1
Probab=30.64 E-value=73 Score=18.54 Aligned_cols=23 Identities=9% Similarity=0.313 Sum_probs=15.6
Q ss_pred HhcCCCEEEEEcCCCceEEEEeH
Q 039385 88 LTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 88 ~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
....-..+.|...+|+++|.+..
T Consensus 60 ~~~~~~~~~v~~~~~~~vG~~~~ 82 (159)
T 2aj6_A 60 LEHTNDKIYIYENEGQLIAFIWG 82 (159)
T ss_dssp HHSSSEEEEEEEETTEEEEEEEE
T ss_pred HhCCCcEEEEEEECCeEEEEEEE
Confidence 33444556666668999999864
No 213
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=30.57 E-value=32 Score=25.17 Aligned_cols=19 Identities=16% Similarity=0.158 Sum_probs=15.1
Q ss_pred CCEEEEEcCCCceEEEEeH
Q 039385 92 VHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~ 110 (126)
..-=|++|.+|+++||.+.
T Consensus 204 nSGGPl~n~~G~VIGI~t~ 222 (451)
T 3pv2_A 204 NSGGALVNAKGELIGINTA 222 (451)
T ss_dssp GTTSEEEETTCCEEEEEEC
T ss_pred CCcCcccCCCCeEEEEEeE
Confidence 3456899999999999763
No 214
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=30.49 E-value=41 Score=19.62 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=29.6
Q ss_pred CHHHHHHHHHhcCCCEEEEEcCCCceEE----EEeHHHHHHHHHHhhh
Q 039385 79 PLSEVIGKALTKHVHRVWVVDQQRLLLG----LVSLTDMIRVLRTSIL 122 (126)
Q Consensus 79 ~l~~~~~~m~~~~~~~lpVvd~~~~lvG----ivs~~dil~~~~~~~~ 122 (126)
.-.++.+.+.-..+..+.++|.+|++++ ..+..++.+.+.+...
T Consensus 97 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 144 (154)
T 3ia1_A 97 RPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGA 144 (154)
T ss_dssp CHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTC
T ss_pred chHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccC
Confidence 4445555555567778889999997654 4577777777766543
No 215
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=30.15 E-value=34 Score=22.84 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=12.9
Q ss_pred CEEEEEcCCCceEEEE
Q 039385 93 HRVWVVDQQRLLLGLV 108 (126)
Q Consensus 93 ~~lpVvd~~~~lvGiv 108 (126)
.-=|++|..|++|.||
T Consensus 205 SGRpI~DN~GrVVaIV 220 (253)
T 2yew_A 205 SGRPIFDNTGKVVAIV 220 (253)
T ss_dssp TTCEEECSSCBEEEEE
T ss_pred CCCccccCCCcEEEEE
Confidence 4458999889999887
No 216
>2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A*
Probab=29.90 E-value=90 Score=18.71 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=19.1
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
+.+.......-....++..+|+++|.+...
T Consensus 52 ~~~~~~~~~~~~~~~~i~~~g~~vG~~~~~ 81 (194)
T 2z10_A 52 AHLEGLLGEPGRVNWAILFGKEVAGRISVI 81 (194)
T ss_dssp HHHHHHHHSTTCEEEEEEETTEEEEEEEEE
T ss_pred HHHHHhhcCCCceEEEEecCCCEEEEEEec
Confidence 333434444555566666689999998754
No 217
>3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0
Probab=29.88 E-value=79 Score=18.38 Aligned_cols=33 Identities=30% Similarity=0.482 Sum_probs=19.8
Q ss_pred CHHHHHHHH---HhcCCCEEEEEc-CCCceEEEEeHH
Q 039385 79 PLSEVIGKA---LTKHVHRVWVVD-QQRLLLGLVSLT 111 (126)
Q Consensus 79 ~l~~~~~~m---~~~~~~~lpVvd-~~~~lvGivs~~ 111 (126)
+..+....+ ....-..+.|+. .+|+++|.+...
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 77 (176)
T 3eg7_A 41 SFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELI 77 (176)
T ss_dssp SHHHHHHHHHHSTTCTTCEEEEEECTTCCEEEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCccEEEEEecCCCEEEEEEEE
Confidence 444444433 333444555655 789999999753
No 218
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=29.84 E-value=86 Score=19.00 Aligned_cols=25 Identities=16% Similarity=0.164 Sum_probs=20.7
Q ss_pred CCCEEEEEcCCCceEEEEeHHHHHH
Q 039385 91 HVHRVWVVDQQRLLLGLVSLTDMIR 115 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~~dil~ 115 (126)
....++|+|++++.+|...+.....
T Consensus 8 ~~E~~~i~d~~~~~~g~~~r~~~~~ 32 (180)
T 2fkb_A 8 STEWVDIVNEENEVIAQASREQMRA 32 (180)
T ss_dssp CCCEEEEECTTSCEEEEEEHHHHHH
T ss_pred CCeeEEEECCCCCEeeEEEHHHhhc
Confidence 4577899999999999999886644
No 219
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=29.74 E-value=76 Score=17.98 Aligned_cols=27 Identities=19% Similarity=0.010 Sum_probs=18.7
Q ss_pred HHHHHHHHhcCCCEEEEEcCCCceEEE
Q 039385 81 SEVIGKALTKHVHRVWVVDQQRLLLGL 107 (126)
Q Consensus 81 ~~~~~~m~~~~~~~lpVvd~~~~lvGi 107 (126)
.+.++.+....-.++.|+|.+|++++-
T Consensus 37 ~~~l~~~~~~~~~rItiiD~~G~Vl~d 63 (122)
T 3cwf_A 37 EKIIKDAGGALDVSASVIDTDGKVLYG 63 (122)
T ss_dssp HHHHHHHHHHHTCEEEEEETTSCEEEE
T ss_pred hHHHHHHHhhcCcEEEEECCCCcEEEe
Confidence 445555544333689999999998863
No 220
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.67 E-value=70 Score=17.99 Aligned_cols=51 Identities=6% Similarity=0.030 Sum_probs=36.0
Q ss_pred eEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCc----eEEEEeHHHHHHHHHHhhh
Q 039385 71 LLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRL----LLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 71 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~----lvGivs~~dil~~~~~~~~ 122 (126)
+..+..+.. .++.+.+.-..+..+.+++++++ +.|..+..++.+.+.+.+.
T Consensus 70 ~~~vd~~~~-~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 70 VGAVNADKH-QSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEEEETTTC-HHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCC-HHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 445555544 45556676678888888887664 6788888889888877654
No 221
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=29.38 E-value=29 Score=26.20 Aligned_cols=14 Identities=14% Similarity=0.102 Sum_probs=0.0
Q ss_pred EEEcCCCceEEEEe
Q 039385 96 WVVDQQRLLLGLVS 109 (126)
Q Consensus 96 pVvd~~~~lvGivs 109 (126)
|++|.+|+++||.+
T Consensus 203 PLvn~~GeVIGInt 216 (539)
T 4fln_A 203 PAFNDQGECIGVAF 216 (539)
T ss_dssp EEECSSSCEEEEEC
T ss_pred hhccCCCcEEEEEE
No 222
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=28.92 E-value=36 Score=22.89 Aligned_cols=16 Identities=13% Similarity=0.194 Sum_probs=12.8
Q ss_pred CEEEEEcCCCceEEEE
Q 039385 93 HRVWVVDQQRLLLGLV 108 (126)
Q Consensus 93 ~~lpVvd~~~~lvGiv 108 (126)
.-=|++|..|++|+||
T Consensus 215 SGRpI~DN~GrVVaIV 230 (264)
T 1kxf_A 215 SGRPIMDNSGRVVAIV 230 (264)
T ss_dssp TTCEEECTTSCEEEEE
T ss_pred CCCccccCCCcEEEEE
Confidence 4458999889998887
No 223
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=28.78 E-value=90 Score=18.15 Aligned_cols=40 Identities=10% Similarity=-0.007 Sum_probs=26.8
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEE----EEeHHHHHHHHHHhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLG----LVSLTDMIRVLRTSIL 122 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvG----ivs~~dil~~~~~~~~ 122 (126)
+.+.+.-..+....++|.+|+++. ..+..++.+.+.+.+.
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 444444566778889998897654 5677777777665543
No 224
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae}
Probab=28.47 E-value=94 Score=18.26 Aligned_cols=22 Identities=14% Similarity=0.160 Sum_probs=14.8
Q ss_pred cCCCEEEEEcCCCceEEEEeHH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~~ 111 (126)
.......|...+++++|.++..
T Consensus 56 ~~~~~~~v~~~~~~~vG~~~~~ 77 (172)
T 2i79_A 56 SDNQITLLAFLNGKIAGIVNIT 77 (172)
T ss_dssp CSSCEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEECCEEEEEEEEE
Confidence 3334555655578999998764
No 225
>2gx5_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, GAF domain; HET: PG4 P6G PCG PGE; 1.74A {Bacillus subtilis} PDB: 2b18_A 2hgv_A*
Probab=28.31 E-value=1e+02 Score=19.50 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=27.0
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 76 VDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 76 ~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
...+..++.+.+.+.=-..++|++.+|+++|.--.
T Consensus 30 ~~v~f~eia~vLs~vL~~NvyIvs~~GkiLG~~~~ 64 (170)
T 2gx5_A 30 KPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSIN 64 (170)
T ss_dssp SCCCHHHHHHHHHHHHTSEEEEEETTSBEEEEECS
T ss_pred CCCCHHHHHHHHHHHhCCCEEEEcCCCCEEEEecc
Confidence 55577777777766555689999999999998643
No 226
>3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron}
Probab=28.21 E-value=99 Score=18.43 Aligned_cols=35 Identities=9% Similarity=0.006 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 77 DSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 77 ~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
..+.......+.......+.|...+++++|.+...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~ 68 (181)
T 3ey5_A 34 YRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYW 68 (181)
T ss_dssp SCCHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEE
T ss_pred cchHHHHHHHhccCCCeEEEEEEECCEEEEEEEEE
Confidence 33445555545435555666666689999998753
No 227
>3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii}
Probab=28.12 E-value=91 Score=18.01 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=19.7
Q ss_pred CHHHHHHHH---HhcCCCEEEEEc-CCCceEEEEeHH
Q 039385 79 PLSEVIGKA---LTKHVHRVWVVD-QQRLLLGLVSLT 111 (126)
Q Consensus 79 ~l~~~~~~m---~~~~~~~lpVvd-~~~~lvGivs~~ 111 (126)
+..+....+ ....-....++. .+|+++|.+...
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 76 (170)
T 3tth_A 40 SYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELT 76 (170)
T ss_dssp SHHHHHHHHHHHTTCCSCEEEEEECTTCCEEEEEEEE
T ss_pred cHHHHHHHHHhhccCCCccEEEEEcCCCCEEEEEEEE
Confidence 444444333 334444555655 789999998753
No 228
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=27.87 E-value=1e+02 Score=18.61 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=23.0
Q ss_pred HHHHhcCCCEEEEEcCCCceEE----EEeHHHHHHHHHHh
Q 039385 85 GKALTKHVHRVWVVDQQRLLLG----LVSLTDMIRVLRTS 120 (126)
Q Consensus 85 ~~m~~~~~~~lpVvd~~~~lvG----ivs~~dil~~~~~~ 120 (126)
+.+.-..+....++|.+|+++. ..+..++.+.+.+.
T Consensus 126 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 126 LDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp HHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHH
T ss_pred HHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3333445667889999997654 46777666655443
No 229
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=27.84 E-value=82 Score=19.49 Aligned_cols=31 Identities=13% Similarity=0.338 Sum_probs=22.4
Q ss_pred CCCEEEEEcCCCceEEEE--------eHHHHHHHHHHhh
Q 039385 91 HVHRVWVVDQQRLLLGLV--------SLTDMIRVLRTSI 121 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGiv--------s~~dil~~~~~~~ 121 (126)
.+....++|.+|+++... +..++++.+....
T Consensus 122 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 122 ALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp ECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 566788999999887776 4567777765543
No 230
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=27.82 E-value=1.1e+02 Score=19.72 Aligned_cols=30 Identities=13% Similarity=0.330 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCceEEEEe--------HHHHHHHHHHhh
Q 039385 92 VHRVWVVDQQRLLLGLVS--------LTDMIRVLRTSI 121 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs--------~~dil~~~~~~~ 121 (126)
...+.|+|.+|++..+.. ..++++.+....
T Consensus 128 ~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 128 CRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 568899999999988873 567777765543
No 231
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=27.61 E-value=93 Score=17.94 Aligned_cols=38 Identities=0% Similarity=0.017 Sum_probs=25.3
Q ss_pred HHHHHhcCCCEEEEEcCCCceEE----EEeHHHHHHHHHHhh
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLG----LVSLTDMIRVLRTSI 121 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvG----ivs~~dil~~~~~~~ 121 (126)
.+.+.-.++..+.++|.+|++++ ..+..++.+.+...+
T Consensus 96 ~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 96 LDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp HHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 34444456778889998997765 446777777666543
No 232
>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus}
Probab=27.47 E-value=89 Score=17.65 Aligned_cols=22 Identities=9% Similarity=0.137 Sum_probs=15.5
Q ss_pred cCCCEEEEEcCCCceEEEEeHH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~~ 111 (126)
..-..+.|+..+|+++|.+...
T Consensus 59 ~~~~~~~~~~~~~~~vG~~~~~ 80 (160)
T 3exn_A 59 DPRRRAFLLFLGQEPVGYLDAK 80 (160)
T ss_dssp CTTEEEEEEEETTEEEEEEEEE
T ss_pred CCCceEEEEEECCeEEEEEEee
Confidence 3445566666689999998753
No 233
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=27.31 E-value=59 Score=20.62 Aligned_cols=28 Identities=25% Similarity=0.290 Sum_probs=17.6
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeHHH
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSLTD 112 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~~d 112 (126)
+..+...+...++|-- +++++|++...|
T Consensus 157 ~~~~~~~G~T~V~vai-dg~l~g~iavaD 184 (185)
T 2kmv_A 157 MTEHERKGRTAVLVAV-DDELCGLIAIAD 184 (185)
T ss_dssp HHHHHHTTCEEEEEEE-TTEEEEEEEEEC
T ss_pred HHHHHhCCCeEEEEEE-CCEEEEEEEEEc
Confidence 3344444544555544 789999998765
No 234
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=27.13 E-value=69 Score=18.36 Aligned_cols=52 Identities=15% Similarity=0.262 Sum_probs=35.5
Q ss_pred ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCc---eEEEEeHHHHHHHHHHhhh
Q 039385 70 ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRL---LLGLVSLTDMIRVLRTSIL 122 (126)
Q Consensus 70 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~---lvGivs~~dil~~~~~~~~ 122 (126)
.+..+..+.. .++.+.+.-.++..+.+++.+|+ +.|..+..++.+.+.+.+.
T Consensus 85 ~~~~v~~~~~-~~~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 85 YIYKVNVDKE-PELARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp EEEEEETTTC-HHHHHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred EEEEEECCCC-HHHHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 3455665554 45556666677888888877774 5677788888888776543
No 235
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=27.11 E-value=89 Score=19.07 Aligned_cols=31 Identities=6% Similarity=0.270 Sum_probs=22.7
Q ss_pred CCCEEEEEcCCCceEEEE--------eHHHHHHHHHHhh
Q 039385 91 HVHRVWVVDQQRLLLGLV--------SLTDMIRVLRTSI 121 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGiv--------s~~dil~~~~~~~ 121 (126)
.+....++|.+|++++.. +..++++.+.+..
T Consensus 118 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 118 ADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 566888999999888775 4567777766544
No 236
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=27.05 E-value=1e+02 Score=18.19 Aligned_cols=28 Identities=11% Similarity=0.306 Sum_probs=19.7
Q ss_pred EEEEEcCCCceEEEE----eHHHHHHHHHHhh
Q 039385 94 RVWVVDQQRLLLGLV----SLTDMIRVLRTSI 121 (126)
Q Consensus 94 ~lpVvd~~~~lvGiv----s~~dil~~~~~~~ 121 (126)
...|+|.+|++++.. +..++.+.+...+
T Consensus 132 ~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 132 AIYLLNPDGLFTDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp EEEEECTTSCEEEEEESSCCHHHHHHHHHHHH
T ss_pred eEEEECCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 577899999887764 5566766665543
No 237
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=26.85 E-value=83 Score=18.33 Aligned_cols=27 Identities=4% Similarity=0.081 Sum_probs=17.3
Q ss_pred HHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 84 IGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
+....+..-..+.|...+|+++|.+..
T Consensus 54 ~~~~~~~~~~~~~v~~~~~~~vG~~~~ 80 (166)
T 4evy_A 54 MHQLLAEKYALQLLAYSDHQAIAMLEA 80 (166)
T ss_dssp HHHHHTCTTEEEEEEEETTEEEEEEEE
T ss_pred HHHHhcCCCceEEEEEECCeEEEEEEE
Confidence 333344444556666557999999865
No 238
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=26.84 E-value=1.1e+02 Score=18.54 Aligned_cols=17 Identities=18% Similarity=0.317 Sum_probs=14.2
Q ss_pred CEEEEEcCCCceEEEEe
Q 039385 93 HRVWVVDQQRLLLGLVS 109 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs 109 (126)
..+.++|.+|++++...
T Consensus 135 ~~~~liD~~G~i~~~~~ 151 (170)
T 4hde_A 135 TSFYLIDQNGKVMKKYS 151 (170)
T ss_dssp CEEEEECTTSCEEEEEE
T ss_pred eEEEEEcCCCeEEEEEC
Confidence 36789999999998864
No 239
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=26.73 E-value=1.1e+02 Score=19.93 Aligned_cols=30 Identities=13% Similarity=0.375 Sum_probs=22.8
Q ss_pred CCEEEEEcCCCceEEEE--------eHHHHHHHHHHhh
Q 039385 92 VHRVWVVDQQRLLLGLV--------SLTDMIRVLRTSI 121 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGiv--------s~~dil~~~~~~~ 121 (126)
...++|+|.+|+++.+. +..++++.+....
T Consensus 127 ~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 127 CRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp CEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 56889999999998887 3567777776543
No 240
>1pm3_A MTH1895; unknown function, structural genomics, PSI, protein structure initiative; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.41.1.2
Probab=26.61 E-value=56 Score=18.41 Aligned_cols=27 Identities=7% Similarity=0.223 Sum_probs=21.1
Q ss_pred ccC-CCCceeeEeeCCCceeEEEeecccc
Q 039385 4 YKK-PNVERNSISLGNGWRLIGTFSASDL 31 (126)
Q Consensus 4 ~~~-~~~~~~pVvd~~~~~l~G~is~~dl 31 (126)
|+. +.+...+|++.++ +-+|.+..-.+
T Consensus 21 Mr~~seL~Gk~Vin~dG-~~LG~V~Dv~i 48 (97)
T 1pm3_A 21 MRIVEEMVGKEVLDSSA-KVIGKVKDVEV 48 (97)
T ss_dssp EETTTTSSSCEEECTTS-CEEEEEEEEEE
T ss_pred EEeehhCCCCEeECCCC-CEEeEEEEEEE
Confidence 444 6788999999766 99999966555
No 241
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=26.60 E-value=93 Score=17.61 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=26.7
Q ss_pred HHHHHHHhcCCCEEEEEcCCCceEEE----EeHHHHHHHHHHhh
Q 039385 82 EVIGKALTKHVHRVWVVDQQRLLLGL----VSLTDMIRVLRTSI 121 (126)
Q Consensus 82 ~~~~~m~~~~~~~lpVvd~~~~lvGi----vs~~dil~~~~~~~ 121 (126)
++.+.+.-..+..+.++|.+|++++. .+..++.+.+.+.+
T Consensus 101 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 101 ALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp HHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHH
T ss_pred hHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 34445555678889999989987654 45566666665544
No 242
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}
Probab=26.39 E-value=73 Score=17.94 Aligned_cols=24 Identities=8% Similarity=0.034 Sum_probs=16.7
Q ss_pred HHhcCCCEEEEEcCCCceEEEEeH
Q 039385 87 ALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 87 m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
+.......+.|...+++++|.+..
T Consensus 49 ~~~~~~~~~~v~~~~~~~vG~~~~ 72 (157)
T 3dsb_A 49 LLDERKGKYHVYTVFDKVVAQIMY 72 (157)
T ss_dssp HHCGGGCEEEEEEETTEEEEEEEE
T ss_pred HhCcCcceEEEEEeCCcEEEEEEE
Confidence 333444566777778999999876
No 243
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=26.34 E-value=79 Score=16.66 Aligned_cols=33 Identities=6% Similarity=-0.154 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEE
Q 039385 76 VDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLV 108 (126)
Q Consensus 76 ~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGiv 108 (126)
+-.+++||+..|.-.+...+.-.|.+..-+.+|
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n~etg~~nVV 44 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTDSEDGATNIL 44 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEETTTCSEEEE
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEeCCCCCEEEE
Confidence 446899999999888888887787653334444
No 244
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=26.20 E-value=42 Score=24.51 Aligned_cols=21 Identities=14% Similarity=0.120 Sum_probs=16.4
Q ss_pred cCCCEEEEEcCCCceEEEEeH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~ 110 (126)
.+..-=|++|.+|+++||.+.
T Consensus 207 ~GnSGGpl~n~~G~vvGI~~~ 227 (448)
T 1ky9_A 207 RGNAGGALVNLNGELIGINTA 227 (448)
T ss_dssp TSCCCSEEECTTSCEEEEEEC
T ss_pred CCCCCCeeECCCCEEEEEEEE
Confidence 444556899999999999873
No 245
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=26.03 E-value=58 Score=20.92 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=12.8
Q ss_pred CEEEEEcCCCceEEEEeH
Q 039385 93 HRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~ 110 (126)
-..||.+.+|++.|++..
T Consensus 130 ~~~pi~~~~g~~~Gvl~~ 147 (254)
T 3lif_A 130 VSRRLETTDGKFFGVVVA 147 (254)
T ss_dssp EEEEEECTTCCEEEEEEE
T ss_pred EEeeeeCCCCCEeEEEEE
Confidence 346777878888887653
No 246
>1f5m_A GAF; CGMP binding, signaling protein; 1.90A {Saccharomyces cerevisiae} SCOP: d.110.2.1 PDB: 3ko6_A*
Probab=25.65 E-value=61 Score=20.21 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=16.0
Q ss_pred CCCEEEEEcCCCceEEEEeHH
Q 039385 91 HVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~~ 111 (126)
..-.+|+...+|+++|++...
T Consensus 131 S~l~vPi~~~~g~viGVL~l~ 151 (180)
T 1f5m_A 131 SEIVVPIISNDGKTLGVIDID 151 (180)
T ss_dssp EEEEEEEECTTSCEEEEEEEE
T ss_pred eEEEEEEEcCCCeEEEEEEec
Confidence 344678887578999999764
No 247
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=25.47 E-value=96 Score=19.03 Aligned_cols=28 Identities=14% Similarity=0.258 Sum_probs=20.5
Q ss_pred EEEEEcCCCceEEE----EeHHHHHHHHHHhh
Q 039385 94 RVWVVDQQRLLLGL----VSLTDMIRVLRTSI 121 (126)
Q Consensus 94 ~lpVvd~~~~lvGi----vs~~dil~~~~~~~ 121 (126)
...|+|.+|++++. .+..++.+.+.+.+
T Consensus 151 ~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFSPGASVKDIEEKLIPLL 182 (187)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHHHC
T ss_pred eEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 66799999998887 46677666665543
No 248
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=25.27 E-value=85 Score=18.42 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=19.0
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEE
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLV 108 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGiv 108 (126)
+.+.+.-..+....++|.+|+++...
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred HHHHcCcccCceEEEECCCCeEEEec
Confidence 45555556788899999999876643
No 249
>2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans}
Probab=25.20 E-value=97 Score=18.64 Aligned_cols=33 Identities=12% Similarity=0.078 Sum_probs=20.0
Q ss_pred CHHHHHHHH---HhcCCCEEEEEcCCCceEEEEeHH
Q 039385 79 PLSEVIGKA---LTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 79 ~l~~~~~~m---~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
+..+....+ .......+.|+..+|+++|.+...
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~ 88 (198)
T 2qml_A 53 PLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESY 88 (198)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEE
T ss_pred CHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEE
Confidence 444443333 333344556666689999999874
No 250
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens}
Probab=25.11 E-value=60 Score=19.07 Aligned_cols=19 Identities=16% Similarity=0.326 Sum_probs=14.5
Q ss_pred CCCEEEEEcCCCceEEEEeH
Q 039385 91 HVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~ 110 (126)
..-.+|+.. +|+++|++..
T Consensus 119 s~l~vPl~~-~~~~iGvl~~ 137 (181)
T 3e0y_A 119 SMLSFPIGD-KKEVYGVINL 137 (181)
T ss_dssp EEEEEEEEC-SSCEEEEEEE
T ss_pred eEEEEEEEe-CCeEEEEEEE
Confidence 344578888 5999999876
No 251
>3c38_A Autoinducer 2 sensor kinase/phosphatase LUXQ; 2-component system, quorum sensing, histidine kinase, hydrolase, inner membrane, membrane; 2.30A {Vibrio cholerae} PDB: 3c30_A
Probab=24.85 E-value=27 Score=23.91 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=19.2
Q ss_pred CceeeEeeCCCceeEEEeecccccc
Q 039385 9 VERNSISLGNGWRLIGTFSASDLRG 33 (126)
Q Consensus 9 ~~~~pVvd~~~~~l~G~is~~dl~~ 33 (126)
++..||+|..+|+++|.+-.+=+..
T Consensus 138 vRr~pIid~~TGEVlG~Ly~gvVLn 162 (270)
T 3c38_A 138 MRRSSLIEAGTGQVVGYLYVGIVLN 162 (270)
T ss_dssp EEEEEECCCC-CCCCEEEEEEEECT
T ss_pred EEccceecCCCCcEEEEEEEEEEec
Confidence 4678999999999999987666643
No 252
>2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1
Probab=24.62 E-value=1.2e+02 Score=18.17 Aligned_cols=22 Identities=9% Similarity=0.427 Sum_probs=16.2
Q ss_pred cCCCEEEEEcCCCceEEEEeHH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~~ 111 (126)
.....+.|+..+|+++|.+...
T Consensus 64 ~~~~~~~v~~~~~~~vG~~~~~ 85 (190)
T 2gan_A 64 QEFDELYTYQKDNRIIGTIALV 85 (190)
T ss_dssp TTCSEEEEEEESSCEEEEEEEE
T ss_pred CCCcEEEEEEECCEEEEEEEEE
Confidence 4556666766689999998764
No 253
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=24.62 E-value=69 Score=19.73 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=16.1
Q ss_pred HHHhcCCCEEEEEcCCCceEEEEeHHH
Q 039385 86 KALTKHVHRVWVVDQQRLLLGLVSLTD 112 (126)
Q Consensus 86 ~m~~~~~~~lpVvd~~~~lvGivs~~d 112 (126)
.+...+...++|-- +++++|++...|
T Consensus 140 ~~~~~G~T~v~va~-dg~~~g~i~l~D 165 (165)
T 2arf_A 140 DHEMKGQTAILVAI-DGVLCGMIAIAD 165 (165)
T ss_dssp HHHTTTSEEEEEEE-TTEEEEEEEECC
T ss_pred HHHhCCCeEEEEEE-CCEEEEEEEEEC
Confidence 33334444455544 789999998754
No 254
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=24.47 E-value=73 Score=19.01 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=20.6
Q ss_pred CCCCHHHHHHHHH----hcCCCEEEEEcCCCceEEEEeH
Q 039385 76 VDSPLSEVIGKAL----TKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 76 ~~~~l~~~~~~m~----~~~~~~lpVvd~~~~lvGivs~ 110 (126)
+..+-.++..... ......+.|.+.+|+++|.++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dg~ivG~~~~ 78 (173)
T 4h89_A 40 PELTDEQARSLWMTPSGAPQSRTTVAVDADGTVLGSANM 78 (173)
T ss_dssp TTCCHHHHHHHHSCCCC-CCCEEEEEECTTCCEEEEEEE
T ss_pred CCCCHHHHHHHHHhhhcCCCceEEEEEEeCCeEEEEEEE
Confidence 4445455544332 2233456667788999999875
No 255
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=24.36 E-value=52 Score=18.20 Aligned_cols=18 Identities=22% Similarity=0.178 Sum_probs=13.8
Q ss_pred CCEEEEEcCCCceEEEEe
Q 039385 92 VHRVWVVDQQRLLLGLVS 109 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs 109 (126)
+...||.|++|++.|.|.
T Consensus 96 ~~~~pi~~~~g~~~g~v~ 113 (121)
T 4hi4_A 96 LDVVPVFNDANARLGSAV 113 (121)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred EEEEEEECCCCCEEEEEE
Confidence 356788888899998763
No 256
>2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A
Probab=23.88 E-value=1e+02 Score=18.31 Aligned_cols=22 Identities=18% Similarity=0.104 Sum_probs=15.0
Q ss_pred cCCCEEEEEcC--CCceEEEEeHH
Q 039385 90 KHVHRVWVVDQ--QRLLLGLVSLT 111 (126)
Q Consensus 90 ~~~~~lpVvd~--~~~lvGivs~~ 111 (126)
.+...+.|... +|+++|.+...
T Consensus 81 ~~~~~~~v~~~~~~g~ivG~~~~~ 104 (184)
T 2o28_A 81 SGDYYVTVVEDVTLGQIVATATLI 104 (184)
T ss_dssp HSCEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCeEEEEEEeCCCCcEEEEEEEE
Confidence 44455666654 68999998853
No 257
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=23.76 E-value=97 Score=17.70 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=13.6
Q ss_pred CEEEEEcCCCceEEEEeHH
Q 039385 93 HRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~~ 111 (126)
..+.|...+|+++|.+...
T Consensus 54 ~~~~~~~~~~~~vG~~~~~ 72 (174)
T 3dr6_A 54 YPVLVSEENGVVTGYASFG 72 (174)
T ss_dssp CCEEEEEETTEEEEEEEEE
T ss_pred ceEEEEecCCeEEEEEEEe
Confidence 3455666689999999763
No 258
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=23.51 E-value=1.2e+02 Score=17.89 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=20.8
Q ss_pred CEEEEEcCCCceEEEEe---------HHHHHHHHHHh
Q 039385 93 HRVWVVDQQRLLLGLVS---------LTDMIRVLRTS 120 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs---------~~dil~~~~~~ 120 (126)
....++|.+|+++.... ..++++.+.+.
T Consensus 129 p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 129 RSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp CEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred eEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 67889999999988873 25677666543
No 259
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=23.25 E-value=1.2e+02 Score=17.51 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=21.9
Q ss_pred HHhcCCCEEEEEcCCCceEEE----EeHHHHHHHHHHh
Q 039385 87 ALTKHVHRVWVVDQQRLLLGL----VSLTDMIRVLRTS 120 (126)
Q Consensus 87 m~~~~~~~lpVvd~~~~lvGi----vs~~dil~~~~~~ 120 (126)
+.-..+....++|.+|++++. .+..++.+.+.+.
T Consensus 113 ~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 113 WGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp TTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHH
T ss_pred cCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 333456667789989987654 5666666665544
No 260
>1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1
Probab=23.25 E-value=79 Score=17.82 Aligned_cols=19 Identities=21% Similarity=0.198 Sum_probs=13.8
Q ss_pred CEEEEEcCCCceEEEEeHH
Q 039385 93 HRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~~ 111 (126)
..+.|.+.+|+++|.+...
T Consensus 40 ~~~~v~~~~~~~vG~~~~~ 58 (140)
T 1y9w_A 40 VSLVVKNEEGKIFGGVTGT 58 (140)
T ss_dssp EEEEEECTTCCEEEEEEEE
T ss_pred eEEEEECCCCeEEEEEEEE
Confidence 3566777789999987643
No 261
>2nv4_A UPF0066 protein AF_0241; NESG GR27 Y241_arcfu X-RAY, structural genomics, PSI-2, protein structure initiative; HET: SAM; 2.20A {Archaeoglobus fulgidus}
Probab=23.11 E-value=27 Score=21.64 Aligned_cols=31 Identities=13% Similarity=0.326 Sum_probs=19.6
Q ss_pred CccccCCCCceeeEeeCCCceeEEEeecccc
Q 039385 1 MFWYKKPNVERNSISLGNGWRLIGTFSASDL 31 (126)
Q Consensus 1 ~~~~~~~~~~~~pVvd~~~~~l~G~is~~dl 31 (126)
+|||.+.+-..+-|.-...+..+|+++.+.=
T Consensus 54 l~~fh~~~~~~~~v~P~~~~~~~GVFATRSP 84 (147)
T 2nv4_A 54 LYWMDKASRDKLRVVPPGETEERGVFTTRSP 84 (147)
T ss_dssp EEECTTSCSSCCEECCTTCCSCEEGGGSCCS
T ss_pred EEEEecCCCcEEEecCCCCCceEEEEeccCC
Confidence 5899887666555554444356777666544
No 262
>3ksh_A Putative uncharacterized protein; FRMSR, free-Met-R-SO, oxidoreductase; 1.50A {Staphylococcus aureus} SCOP: d.110.2.0 PDB: 3ksf_A 3ksi_A 3ksg_A*
Probab=23.06 E-value=65 Score=19.94 Aligned_cols=19 Identities=11% Similarity=0.240 Sum_probs=15.1
Q ss_pred CCEEEEEcCCCceEEEEeHH
Q 039385 92 VHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~~ 111 (126)
.-.+|+.. +|+++|++...
T Consensus 115 ei~VPI~~-~g~viGVL~i~ 133 (160)
T 3ksh_A 115 EIVVPIFK-DDKIIGVLDID 133 (160)
T ss_dssp EEEEEEEE-TTEEEEEEEEE
T ss_pred eEEEEEEE-CCEEEEEEEEe
Confidence 34789987 69999999863
No 263
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=22.99 E-value=22 Score=18.41 Aligned_cols=47 Identities=15% Similarity=0.024 Sum_probs=26.8
Q ss_pred ceEEEeCCCCHHHHHHHHHhcCCCEEEEEcCCCceEEEEeHHHHHHHH
Q 039385 70 ELLTCQVDSPLSEVIGKALTKHVHRVWVVDQQRLLLGLVSLTDMIRVL 117 (126)
Q Consensus 70 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~~dil~~~ 117 (126)
++..+.-+.. .+..+.+.+.++..+|++-.+|+.+|-.+..++.+.+
T Consensus 27 ~~~~vdi~~~-~~~~~~~~~~g~~~vP~~~~~g~~~~g~~~~~l~~~l 73 (81)
T 1h75_A 27 DFEMINVDRV-PEAAEALRAQGFRQLPVVIAGDLSWSGFRPDMINRLH 73 (81)
T ss_dssp CCEEEETTTC-HHHHHHHHHTTCCSSCEEEETTEEEESCCHHHHGGGS
T ss_pred CeEEEECCCC-HHHHHHHHHhCCCccCEEEECCEEEecCCHHHHHHHH
Confidence 3344554433 2333445557788888865467777766766554433
No 264
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=22.75 E-value=76 Score=19.32 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=21.5
Q ss_pred cCCCEEEEEcCCCceEEE--E----------eHHHHHHHHHHhhh
Q 039385 90 KHVHRVWVVDQQRLLLGL--V----------SLTDMIRVLRTSIL 122 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGi--v----------s~~dil~~~~~~~~ 122 (126)
..+....++|.+|+++.. + +..++.+.+.+.+.
T Consensus 115 ~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 115 LRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp CEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred CCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 344566788999988765 2 45667766665543
No 265
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=22.65 E-value=1e+02 Score=17.72 Aligned_cols=28 Identities=25% Similarity=0.349 Sum_probs=16.4
Q ss_pred HHHHHhcCCCEEEEEcCC-CceEEEEeHH
Q 039385 84 IGKALTKHVHRVWVVDQQ-RLLLGLVSLT 111 (126)
Q Consensus 84 ~~~m~~~~~~~lpVvd~~-~~lvGivs~~ 111 (126)
+.......-..+.|...+ ++++|.+...
T Consensus 52 ~~~~~~~~~~~~~v~~~~~~~~vG~~~~~ 80 (158)
T 1vkc_A 52 FESLLSQGEHKFFVALNERSELLGHVWIC 80 (158)
T ss_dssp HHHHHHSSEEEEEEEEETTCCEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEEcCCCcEEEEEEEE
Confidence 333344433445555446 8999998754
No 266
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=22.26 E-value=62 Score=18.72 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=19.9
Q ss_pred CHHHHHHHHHh-cCCCEEEEEcCCCceE
Q 039385 79 PLSEVIGKALT-KHVHRVWVVDQQRLLL 105 (126)
Q Consensus 79 ~l~~~~~~m~~-~~~~~lpVvd~~~~lv 105 (126)
-+++.++.+.. .++..+.|+|.+|.++
T Consensus 13 evEe~l~RI~~~kgV~G~iIln~~G~pI 40 (106)
T 2hz5_A 13 EVEETLKRLQSQKGVQGIIVVNTEGIPI 40 (106)
T ss_dssp --CHHHHHHHTSTTEEEEEEECTTCCEE
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCCCeE
Confidence 45777887765 5899999999888665
No 267
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=22.20 E-value=1.2e+02 Score=18.11 Aligned_cols=22 Identities=9% Similarity=0.214 Sum_probs=14.5
Q ss_pred cCCCEEEEEcCCCceEEEEeHH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~~ 111 (126)
.....+.|...+++++|.+...
T Consensus 56 ~~~~~~~va~~~~~ivG~~~~~ 77 (180)
T 1tiq_A 56 NMSSQFFFIYFDHEIAGYVKVN 77 (180)
T ss_dssp CTTEEEEEEEETTEEEEEEEEE
T ss_pred CCCceEEEEEECCEEEEEEEEE
Confidence 3334455665578999988754
No 268
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=22.02 E-value=74 Score=18.35 Aligned_cols=40 Identities=10% Similarity=0.111 Sum_probs=25.4
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEE----EeHHHHHHHHHHhhh
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGL----VSLTDMIRVLRTSIL 122 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGi----vs~~dil~~~~~~~~ 122 (126)
+.+.+.-..+..+.++|.+|++++. .+..++.+.+.+...
T Consensus 100 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 143 (152)
T 2lja_A 100 FMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLG 143 (152)
T ss_dssp HHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHT
T ss_pred HHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhc
Confidence 3344444567778899988977664 455666666655443
No 269
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=22.02 E-value=1.1e+02 Score=16.96 Aligned_cols=20 Identities=10% Similarity=0.169 Sum_probs=14.2
Q ss_pred CCCEEEEEc--CCCceEEEEeH
Q 039385 91 HVHRVWVVD--QQRLLLGLVSL 110 (126)
Q Consensus 91 ~~~~lpVvd--~~~~lvGivs~ 110 (126)
....+.|.. .+++++|.+..
T Consensus 50 ~~~~~~v~~~~~~~~~vG~~~~ 71 (152)
T 1qsm_A 50 IKMWAAVAVESSSEKIIGMINF 71 (152)
T ss_dssp SCEEEEEEEESSSCCEEEEEEE
T ss_pred CceeEEEEEeCCCCeEEEEEEE
Confidence 334566665 78999999865
No 270
>3rfb_A Putative uncharacterized protein; FRMSR, GAF, oxidoreductase, SME; HET: SME; 2.30A {Streptococcus pneumoniae}
Probab=21.97 E-value=70 Score=20.08 Aligned_cols=19 Identities=26% Similarity=0.296 Sum_probs=15.2
Q ss_pred CCEEEEEcCCCceEEEEeHH
Q 039385 92 VHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~~ 111 (126)
.-.+|+.. +|+++|++...
T Consensus 116 ei~VPI~~-~g~viGVL~i~ 134 (171)
T 3rfb_A 116 EIVVPMMK-NGQLLGVLDLD 134 (171)
T ss_dssp EEEEEEEE-TTEEEEEEEEE
T ss_pred eEEEEEEE-CCEEEEEEEEe
Confidence 34789987 69999999863
No 271
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=21.97 E-value=70 Score=17.21 Aligned_cols=16 Identities=6% Similarity=-0.074 Sum_probs=11.9
Q ss_pred EEEEEcCCCceEEEEe
Q 039385 94 RVWVVDQQRLLLGLVS 109 (126)
Q Consensus 94 ~lpVvd~~~~lvGivs 109 (126)
..|+.|++|++.|++.
T Consensus 87 ~~pi~d~~G~~~~~v~ 102 (109)
T 1n9l_A 87 VTPIKTPDGRVSKFVG 102 (109)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEE
Confidence 4577788898877764
No 272
>3mmh_A FRMSR, methionine-R-sulfoxide reductase; oxidoreductase; HET: SME MRD; 1.25A {Neisseria meningitidis} SCOP: d.110.2.0
Probab=21.83 E-value=71 Score=19.79 Aligned_cols=19 Identities=11% Similarity=0.058 Sum_probs=15.1
Q ss_pred CCEEEEEcCCCceEEEEeHH
Q 039385 92 VHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~~ 111 (126)
.-.+|+.. +|+++|++...
T Consensus 116 ~i~vPi~~-~g~viGVL~i~ 134 (167)
T 3mmh_A 116 EIVVPLFS-DGRCIGVLDAD 134 (167)
T ss_dssp EEEEEEEE-TTEEEEEEEEE
T ss_pred EEEEEecc-CCEEEEEEEEe
Confidence 34689997 79999999763
No 273
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}
Probab=21.73 E-value=81 Score=18.52 Aligned_cols=22 Identities=23% Similarity=0.597 Sum_probs=15.9
Q ss_pred cCCCEEEEEcCCCceEEEEeHH
Q 039385 90 KHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGivs~~ 111 (126)
.....+.|...+++++|.+...
T Consensus 68 ~~~~~~~v~~~~~~ivG~~~~~ 89 (176)
T 3fyn_A 68 PDLGRIWLIAEGTESVGYIVLT 89 (176)
T ss_dssp GGGEEEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEEECCEEEEEEEEE
Confidence 3345667777789999998754
No 274
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=21.71 E-value=93 Score=18.35 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=18.6
Q ss_pred CCCEEEEEcCCCceEEEE------eHHHHHHHHH
Q 039385 91 HVHRVWVVDQQRLLLGLV------SLTDMIRVLR 118 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGiv------s~~dil~~~~ 118 (126)
+...+.++| +|+++... +..++.+.+.
T Consensus 137 ~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~ 169 (172)
T 2k6v_A 137 HTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQ 169 (172)
T ss_dssp ECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHH
T ss_pred cCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHH
Confidence 456788999 99988877 3445555544
No 275
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=21.70 E-value=55 Score=18.04 Aligned_cols=36 Identities=6% Similarity=-0.120 Sum_probs=24.4
Q ss_pred HHHHHHHh-cCCCEEEEEcCCC-ceEEEEeHHHHHHHH
Q 039385 82 EVIGKALT-KHVHRVWVVDQQR-LLLGLVSLTDMIRVL 117 (126)
Q Consensus 82 ~~~~~m~~-~~~~~lpVvd~~~-~lvGivs~~dil~~~ 117 (126)
++.+.+.+ ++...+|++--++ +.+|-.+..+|.+.+
T Consensus 64 ~~~~~l~~~~g~~~vP~l~i~~~~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 64 EAVEEVRRFNPSVSFPTTIINDEKAIVGFKEKEIRESL 101 (103)
T ss_dssp HHHHHHHHHCTTCCSCEEEETTTEEEESCCHHHHHHHT
T ss_pred HHHHHHHHhCCCCccCEEEECCCEEEEcCCHHHHHHHh
Confidence 44444443 5778888874445 899988888876654
No 276
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=21.52 E-value=94 Score=17.81 Aligned_cols=26 Identities=4% Similarity=0.167 Sum_probs=17.7
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEE
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLV 108 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGiv 108 (126)
+.+.+.-..+....++|.+|++++.-
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 105 LYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred HHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 34444445566778999999988763
No 277
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=21.47 E-value=1.4e+02 Score=17.92 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=22.3
Q ss_pred CCCEEEEEcCCCceEEEEe------HHHHHHHHHHhhh
Q 039385 91 HVHRVWVVDQQRLLLGLVS------LTDMIRVLRTSIL 122 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs------~~dil~~~~~~~~ 122 (126)
.+....|+|.+|+++.... ..++.+.+.+.+.
T Consensus 143 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 143 GMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp SSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 5678899999998876543 4566666655443
No 278
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=21.41 E-value=57 Score=20.69 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=13.1
Q ss_pred cCCCEEEEEcCCCceEEE
Q 039385 90 KHVHRVWVVDQQRLLLGL 107 (126)
Q Consensus 90 ~~~~~lpVvd~~~~lvGi 107 (126)
.+..-=|++|.+|+++|.
T Consensus 117 ~GtSGSPIin~~G~vVGL 134 (172)
T 2fp7_B 117 TGTSGSPIVDKNGDVIGL 134 (172)
T ss_dssp GGGTTCEEECTTSCEEEE
T ss_pred CCCCCCceEccCCcEEEE
Confidence 444556889888888875
No 279
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana}
Probab=21.37 E-value=1e+02 Score=17.21 Aligned_cols=26 Identities=12% Similarity=0.109 Sum_probs=16.4
Q ss_pred HHHhcC-CCEEEEEcC--CCceEEEEeHH
Q 039385 86 KALTKH-VHRVWVVDQ--QRLLLGLVSLT 111 (126)
Q Consensus 86 ~m~~~~-~~~lpVvd~--~~~lvGivs~~ 111 (126)
.+.... ...+.|..+ +|+++|.+...
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 71 (149)
T 3t90_A 43 EIRSYGDDHVICVIEEETSGKIAATGSVM 71 (149)
T ss_dssp HHHTTGGGEEEEEEEETTTTEEEEEEEEE
T ss_pred HHHhCCCCcEEEEEEcCCCCcEEEEEEEE
Confidence 444433 345556665 69999988753
No 280
>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B*
Probab=21.36 E-value=1.3e+02 Score=17.44 Aligned_cols=29 Identities=10% Similarity=0.224 Sum_probs=17.9
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEEEEeHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvGivs~~ 111 (126)
.+..+....-....|+..+++++|.+...
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 72 (168)
T 1z4r_A 44 YIARLVFDPKHKTLALIKDGRVIGGICFR 72 (168)
T ss_dssp HHHHHHTCTTCEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHhCCCcEEEEEEECCEEEEEEEEE
Confidence 33444444445556655579999988753
No 281
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP}
Probab=21.20 E-value=75 Score=18.20 Aligned_cols=18 Identities=22% Similarity=0.325 Sum_probs=14.1
Q ss_pred CCEEEEEcCCCceEEEEeH
Q 039385 92 VHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~ 110 (126)
.-.+|+.. +|+++|++..
T Consensus 117 ~l~vPl~~-~~~~~Gvl~l 134 (171)
T 3ci6_A 117 FLGVPVMY-RRKVMGVLVV 134 (171)
T ss_dssp EEEEEEEE-TTEEEEEEEE
T ss_pred EEEEeEEE-CCEEEEEEEE
Confidence 34588886 6999999975
No 282
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii}
Probab=21.10 E-value=75 Score=18.43 Aligned_cols=17 Identities=24% Similarity=0.472 Sum_probs=13.6
Q ss_pred CEEEEEcCCCceEEEEeH
Q 039385 93 HRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~ 110 (126)
-.+|+.. +|+++|++..
T Consensus 116 l~vPl~~-~~~~~Gvl~~ 132 (171)
T 3trc_A 116 LGIPIIE-QGELLGILVI 132 (171)
T ss_dssp EEEEEEE-TTEEEEEEEE
T ss_pred EEEeEEE-CCEEEEEEEE
Confidence 3578887 6899999975
No 283
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=21.06 E-value=1.3e+02 Score=17.09 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=12.3
Q ss_pred CEEEEEcCCCceEEEEeH
Q 039385 93 HRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 93 ~~lpVvd~~~~lvGivs~ 110 (126)
..+.|...+|+++|.+..
T Consensus 46 ~~~~va~~~~~ivG~~~~ 63 (144)
T 2pdo_A 46 SLFLVAEVNGEVVGTVMG 63 (144)
T ss_dssp TTEEEEEETTEEEEEEEE
T ss_pred ccEEEEEcCCcEEEEEEe
Confidence 345555557999998863
No 284
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=21.01 E-value=70 Score=18.33 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=14.5
Q ss_pred CCEEEEEcCCCceEEEEeHH
Q 039385 92 VHRVWVVDQQRLLLGLVSLT 111 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~~ 111 (126)
-..+.|...+|+++|.+...
T Consensus 53 ~~~~~v~~~~~~~vG~~~~~ 72 (160)
T 3f8k_A 53 DHVTFLAEVDGKVVGEASLH 72 (160)
T ss_dssp CEEEEEEEETTEEEEEEEEE
T ss_pred CceEEEEEECCeEEEEEEee
Confidence 34456666689999998865
No 285
>1ysp_A Transcriptional regulator KDGR; ICLR, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Escherichia coli}
Probab=20.94 E-value=71 Score=19.69 Aligned_cols=21 Identities=19% Similarity=-0.026 Sum_probs=17.6
Q ss_pred eeeEeeCCCceeEEEeeccccc
Q 039385 11 RNSISLGNGWRLIGTFSASDLR 32 (126)
Q Consensus 11 ~~pVvd~~~~~l~G~is~~dl~ 32 (126)
++||.|.+| +++|.|+..-..
T Consensus 126 AaPv~~~~g-~~~~alsv~~p~ 146 (181)
T 1ysp_A 126 AVPVFDRFG-VVIAGLSISFPT 146 (181)
T ss_dssp EEEEECTTS-CEEEEEEECCBS
T ss_pred EEEEECCCC-CEEEEEEEEeeh
Confidence 679999887 999999988763
No 286
>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134}
Probab=20.71 E-value=1.3e+02 Score=17.21 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=13.4
Q ss_pred CCCEEEEEcCCCceEEEEeH
Q 039385 91 HVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 91 ~~~~lpVvd~~~~lvGivs~ 110 (126)
+...+.|...+++++|.+..
T Consensus 51 ~~~~~~va~~~~~ivG~~~~ 70 (153)
T 2q0y_A 51 GSYFGWVMEEGGAPLAGIGL 70 (153)
T ss_dssp TSSEEEEEEETTEEEEEEEE
T ss_pred CCeeEEEEEeCCeEEEEEEE
Confidence 33455565557899998864
No 287
>3hcy_A Putative two-component sensor histidine kinase PR; two-component sensor histidine kinase protein, structural GE PSI, MCSG; 2.80A {Sinorhizobium meliloti}
Probab=20.68 E-value=85 Score=17.96 Aligned_cols=18 Identities=17% Similarity=0.089 Sum_probs=14.2
Q ss_pred CCEEEEEcCCCceEEEEeH
Q 039385 92 VHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs~ 110 (126)
.-.+|+.. +|+++|++..
T Consensus 93 ~~~vPl~~-~~~~iGvl~~ 110 (151)
T 3hcy_A 93 LGFFPLVT-EGRLIGKFMT 110 (151)
T ss_dssp EEEEEEES-SSSEEEEEEE
T ss_pred eEEeceEE-CCEEEEEEEE
Confidence 34678887 8999999865
No 288
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=20.67 E-value=1.1e+02 Score=17.38 Aligned_cols=33 Identities=12% Similarity=-0.002 Sum_probs=18.9
Q ss_pred CCCHHHHHHHHHhcCCCEEEEEcCCC-ceEEEEeH
Q 039385 77 DSPLSEVIGKALTKHVHRVWVVDQQR-LLLGLVSL 110 (126)
Q Consensus 77 ~~~l~~~~~~m~~~~~~~lpVvd~~~-~lvGivs~ 110 (126)
..+.......+. .....+.|...++ +++|.+..
T Consensus 39 ~~~~~~~~~~~~-~~~~~~~v~~~~~g~~vG~~~~ 72 (164)
T 4e0a_A 39 TLNPSRFQAAVQ-GEKSTVLVFVDEREKIGAYSVI 72 (164)
T ss_dssp SSCHHHHHHHHH-CSSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCceEEEEEECCCCcEEEEEEE
Confidence 334444444444 4445555554455 99999875
No 289
>3obf_A Putative transcriptional regulator, ICLR family; structural genomics, PSI-2, protein structure initiative; 2.16A {Arthrobacter aurescens}
Probab=20.43 E-value=71 Score=19.58 Aligned_cols=21 Identities=5% Similarity=0.150 Sum_probs=17.6
Q ss_pred eeeEeeCCCceeEEEeeccccc
Q 039385 11 RNSISLGNGWRLIGTFSASDLR 32 (126)
Q Consensus 11 ~~pVvd~~~~~l~G~is~~dl~ 32 (126)
++||.|.+| +++|.|+..-..
T Consensus 125 AaPI~~~~g-~~~aalsv~~p~ 145 (176)
T 3obf_A 125 ASPVYDHRG-NMVASVLIPAPK 145 (176)
T ss_dssp EEEEECTTS-CEEEEEEEEEEG
T ss_pred EEEEECCCC-CEEEEEEeEeeh
Confidence 589999887 999999987763
No 290
>2fb5_A Hypothetical membrane spanning protein; structural genomics, membrane protein, PSI, protein structur initiative; 1.99A {Bacillus cereus} SCOP: d.320.1.1
Probab=20.41 E-value=1e+02 Score=20.15 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=25.0
Q ss_pred EeCCCC----HHHHHHHHHhcCCCEEEEEcCCCc
Q 039385 74 CQVDSP----LSEVIGKALTKHVHRVWVVDQQRL 103 (126)
Q Consensus 74 v~~~~~----l~~~~~~m~~~~~~~lpVvd~~~~ 103 (126)
+.|.++ +.+++..|.++++..+.|+..+..
T Consensus 70 ~aPgt~~i~~l~~a~~~ls~~k~GALIVie~~~~ 103 (205)
T 2fb5_A 70 LSPYTESSSFITTAIQHLSARKHGALIVVERNET 103 (205)
T ss_dssp HTTTCSCHHHHHHHHHHHHHHTCCEEEEECCSSC
T ss_pred hCCCChHHHHHHHHHHHHhccCeeEEEEEECCcc
Confidence 567778 889999999999999999975443
No 291
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=20.34 E-value=61 Score=18.39 Aligned_cols=35 Identities=0% Similarity=0.035 Sum_probs=20.9
Q ss_pred HHHHHHhcCCCEEEEEcCCCceEE----EEeHHHHHHHH
Q 039385 83 VIGKALTKHVHRVWVVDQQRLLLG----LVSLTDMIRVL 117 (126)
Q Consensus 83 ~~~~m~~~~~~~lpVvd~~~~lvG----ivs~~dil~~~ 117 (126)
+.+.+.-..+..+.++|.+|++++ ..+..++.+.+
T Consensus 106 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 106 LMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 334444455567778898897654 44666655443
No 292
>3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans}
Probab=20.25 E-value=1.3e+02 Score=17.08 Aligned_cols=31 Identities=10% Similarity=0.063 Sum_probs=17.5
Q ss_pred CHHHHHHHHHhcCCCEEEEEcCCCceEEEEeH
Q 039385 79 PLSEVIGKALTKHVHRVWVVDQQRLLLGLVSL 110 (126)
Q Consensus 79 ~l~~~~~~m~~~~~~~lpVvd~~~~lvGivs~ 110 (126)
+.......+ ......+.+.+++++++|.+..
T Consensus 36 ~~~~~~~~~-~~~~~~~~~~~~~~~~vG~~~~ 66 (145)
T 3s6f_A 36 TPETLWRIL-DRAAVFVLARTPDGQVIGFVNA 66 (145)
T ss_dssp CHHHHHHHH-HHSSEEEEEECTTCCEEEEEEE
T ss_pred CHHHHHHHh-ccCceEEEEECCCCCEEEEEEE
Confidence 444444444 3443344444447999999854
No 293
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=20.20 E-value=1.5e+02 Score=17.52 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=20.6
Q ss_pred CCEEEEEcCCCceEEEEe------HHHHHHHHHHh
Q 039385 92 VHRVWVVDQQRLLLGLVS------LTDMIRVLRTS 120 (126)
Q Consensus 92 ~~~lpVvd~~~~lvGivs------~~dil~~~~~~ 120 (126)
.....|+|.+|+++.... ..++.+.+.+.
T Consensus 136 ~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 136 QSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp CCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHH
Confidence 446789999998887653 56677766654
No 294
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=20.04 E-value=73 Score=20.26 Aligned_cols=16 Identities=38% Similarity=0.451 Sum_probs=11.6
Q ss_pred EEEcCCCceEEEEeHH
Q 039385 96 WVVDQQRLLLGLVSLT 111 (126)
Q Consensus 96 pVvd~~~~lvGivs~~ 111 (126)
|++..+++++||+|..
T Consensus 183 PL~~~~g~l~Gi~S~g 198 (224)
T 1pq7_A 183 PIVDSSNTLIGAVSWG 198 (224)
T ss_dssp EEECTTCCEEEEEEEC
T ss_pred ceECcCCeEEEEEEeC
Confidence 5555467899999853
No 295
>2o99_A Acetate operon repressor; ICLR, DNA binding protein; HET: MSE; 1.70A {Escherichia coli} SCOP: d.110.2.2 PDB: 2o9a_A 1td5_A
Probab=20.03 E-value=73 Score=19.68 Aligned_cols=21 Identities=14% Similarity=-0.061 Sum_probs=17.4
Q ss_pred eeeEeeCCCceeEEEeeccccc
Q 039385 11 RNSISLGNGWRLIGTFSASDLR 32 (126)
Q Consensus 11 ~~pVvd~~~~~l~G~is~~dl~ 32 (126)
++||.|.+| +++|.|+..-..
T Consensus 130 AaPv~~~~g-~~~aalsv~~p~ 150 (182)
T 2o99_A 130 AACIFDEHR-EPFAAISISGPI 150 (182)
T ss_dssp EEEEECTTS-CEEEEEEEEEET
T ss_pred EEEEECCCC-CEEEEEEEEeeh
Confidence 679999877 999999987663
Done!