Your job contains 1 sequence.
>039386
MGPRICMNPKCRTANTHEWKKGWLLRSGVCADLCYDCGSAYENFIFCNTFHLEEPGWREC
NFCSKRLHCGCRASNSFLELLDYGGVGCRSCAMSPRLHLIQRDEIPNGFGALTKKDSDDT
QTPMLENRVVGDGTAEGKLTQLCRIMEANEPSFLAPFQRGDTIVSLGQEKREELRLPFVE
VGTGFSSPTKLSSRSSKFTKPDGSRSMLDVRDMPESLAQRSSSMSLGVPAGCSNFVPPFS
NGAADGREPCKAHPSFQQGQRSRPILPKPSKTGLTISSETKKSTASQLRIARPPAEGRGK
NHLLPRYWPRITDQELQQLSGDLNSTIVPLFEKILSASDAGRIGRLVLPKACAEAYFPHI
SQSEGVPLRVQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTSMIHSILT
RDDKITFSRIDPGGKLVMGFRKAPIPGDMQDAQTSAITNGCPGESFLSGVTENLPTVSGY
SGHFQMLKGSKDPHIDALSEHLSLAEGGNGWHKSENHGQKTNEDSPQKSLLGMEKKRTRN
IGSKSKRLLMHSEEAMELRLTWEEAQDLLRPSPSARTKHCHY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039386
(582 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 725 2.4e-130 3
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 689 1.3e-117 3
TAIR|locus:2088439 - symbol:FUS3 "FUSCA 3" species:3702 "... 219 6.0e-16 1
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 205 2.0e-13 2
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 204 2.4e-13 1
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 191 4.1e-12 1
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 199 4.7e-12 2
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 191 5.7e-12 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 174 2.2e-11 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 182 4.3e-11 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 169 9.6e-10 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 169 1.1e-09 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 168 1.5e-09 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 162 4.8e-09 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 159 1.9e-08 2
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 151 6.2e-08 2
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 148 1.4e-07 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 151 1.7e-07 2
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 147 2.2e-07 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 140 9.5e-07 1
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 725 (260.3 bits), Expect = 2.4e-130, Sum P(3) = 2.4e-130
Identities = 160/290 (55%), Positives = 195/290 (67%)
Query: 197 KFTKPDGSRS--MLDVR-DMPESLA-QRSSSMSLGVPAGCSNFVPPFSNGAADGREPCKA 252
K P+ + + LD +M ES Q S +M L V + F P F+ A +G +
Sbjct: 163 KLMSPESTTTGHRLDAAGEMHESSPLQPSLNMGLAV----NPFSPSFATEAVEGMKHISP 218
Query: 253 HPSFQQGQRSRPILPKPSKTGLTISSETKKSTASQLRIARPPAEGRGKNHLLPRYWPRIT 312
S + IL KPS+ IS+ S ++Q RI RPP EGRG+ HLLPRYWP+ T
Sbjct: 219 SQSNMVHCSASNILQKPSRPA--ISTPPVASKSAQARIGRPPVEGRGRGHLLPRYWPKYT 276
Query: 313 DQELQQLSGDLNSTIVPLFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLRVQD 372
D+E+QQ+SG+LN IVPLFEK LSASDAGRIGRLVLPKACAEAYFP ISQSEG+PL++QD
Sbjct: 277 DKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQD 336
Query: 373 VKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTSMIHSILTRDDKITFSRIDP 432
V+G+EW FQFR+WPNNNSRMYVLEGVTPCIQSM L+AGDT +TFSR+DP
Sbjct: 337 VRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDT------------VTFSRVDP 384
Query: 433 GGKLVMGFRKAPIPGDMQDAQTSAITNGCPGE-SFLSGVTENLPTVSGYS 481
GGKL+MG RKA GDMQ +TNG E + SGVTEN P+++G S
Sbjct: 385 GGKLIMGSRKAANAGDMQGC---GLTNGTSTEDTSSSGVTENPPSINGSS 431
Score = 392 (143.0 bits), Expect = 2.4e-130, Sum P(3) = 2.4e-130
Identities = 70/121 (57%), Positives = 83/121 (68%)
Query: 1 MGPRICMNPKCRTANTHEWKKGWLLRSGVCADLCYDCGSAYENFIFCNTFHLEEPGWREC 60
MG ++CMN C T +T EWKKGW LRSG+ ADLCY CGSAYE+ +FC FH ++ GWREC
Sbjct: 6 MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65
Query: 61 NFCSKRLHCGCRASNSFLELLDYGGVGCRSCAMSPRLHLIQRDEIPNGFGALTKKDSDDT 120
CSKRLHCGC AS +EL+DYGGVGC +CA +L+L R E P F L K D
Sbjct: 66 YLCSKRLHCGCIASKVTIELMDYGGVGCSTCACCHQLNLNTRGENPGVFSRLPMKTLADR 125
Query: 121 Q 121
Q
Sbjct: 126 Q 126
Score = 197 (74.4 bits), Expect = 2.4e-130, Sum P(3) = 2.4e-130
Identities = 41/63 (65%), Positives = 50/63 (79%)
Query: 514 SENHGQKTNEDSPQKSLLGMEKKRTRNIGSKSKRLLMHSEEAMELRLTWEEAQDLLRPSP 573
SE +G + +D P + EKKRTR IG+K+KRLL+HSEE+MELRLTWEEAQDLLRPSP
Sbjct: 449 SETNGGRIGDD-PTRV---KEKKRTRTIGAKNKRLLLHSEESMELRLTWEEAQDLLRPSP 504
Query: 574 SAR 576
S +
Sbjct: 505 SVK 507
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 689 (247.6 bits), Expect = 1.3e-117, Sum P(3) = 1.3e-117
Identities = 144/243 (59%), Positives = 167/243 (68%)
Query: 206 SMLDVRDMPESLAQRSSSMSLGVPAGCSNFVPPFSNGAADGREPCKAHPSFQQGQRSRPI 265
S LD + S+ +L + G + PF + A D R K + FQ RSR +
Sbjct: 158 SSLDALRHKTERKELSAQPNLSISLGPTLMTSPFHDAAVDDRS--KTNSIFQLAPRSRQL 215
Query: 266 LPKPSKTG-LTISSETKKSTASQLRIARPPAEGRGKNHLLPRYWPRITDQELQQLSGDL- 323
LPKP+ + + E S SQ+ +ARPP EGRGK LLPRYWPRITDQEL QLSG
Sbjct: 216 LPKPANSAPIAAGMEPSGSLVSQIHVARPPPEGRGKTQLLPRYWPRITDQELLQLSGQYP 275
Query: 324 ---NSTIVPLFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLRVQDVKGKEWVF 380
NS I+PLFEK+LSASDAGRIGRLVLPKACAEAYFP IS EG+PL++QD+KGKEWVF
Sbjct: 276 HLSNSKIIPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQDIKGKEWVF 335
Query: 381 QFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTSMIHSILTRDDKITFSRIDPGGKLVMGF 440
QFRFWPNNNSRMYVLEGVTPCIQSMQL+AGDT +TFSR +P GKLVMG+
Sbjct: 336 QFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT------------VTFSRTEPEGKLVMGY 383
Query: 441 RKA 443
RKA
Sbjct: 384 RKA 386
Score = 311 (114.5 bits), Expect = 1.3e-117, Sum P(3) = 1.3e-117
Identities = 58/106 (54%), Positives = 66/106 (62%)
Query: 4 RICMNPKCRTANTH-EWKKGWLLRSGVCADLCYDCGSAYENFIFCNTFHLEEPGWRECNF 62
++CMN C A+T EWKKGW +RSG A LC CG AYE IFC FH +E GWRECN
Sbjct: 5 KVCMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECNS 64
Query: 63 CSKRLHCGCRASNSFLELLDYGGVGCRSCAMSPRLHLIQRDEIPNG 108
C KRLHCGC AS +ELL+ GGV C SCA L + NG
Sbjct: 65 CDKRLHCGCIASRFMMELLENGGVTCISCAKKSGLISMNVSHESNG 110
Score = 193 (73.0 bits), Expect = 1.3e-117, Sum P(3) = 1.3e-117
Identities = 40/92 (43%), Positives = 57/92 (61%)
Query: 485 QMLKGSKDPHIDALSEHLSLAEGGNGWHKSENHGQKTNEDSPQKSLLGMEKKRTRNIGSK 544
QM KGS +P+++ S L+ G W K E ++ +S L +KR RNIG+K
Sbjct: 393 QMFKGSSEPNLNMFSNSLNPGCGDINWSKLEKSEDMAKDNLFLQSSLTSARKRVRNIGTK 452
Query: 545 SKRLLMHSEEAMELRLTWEEAQDLLRPSPSAR 576
SKRLL+ S + +EL++TWEEAQ+LLRP S +
Sbjct: 453 SKRLLIDSVDVLELKITWEEAQELLRPPQSTK 484
Score = 48 (22.0 bits), Expect = 6.0e-90, Sum P(3) = 6.0e-90
Identities = 37/136 (27%), Positives = 51/136 (37%)
Query: 56 GW--RECNFCSKRLHCGCRASNS-FLELLDYGGVGCRSC-AMSPRLH---LIQR---DEI 105
GW R + S CGC S F E+ G R C + RLH + R + +
Sbjct: 24 GWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECNSCDKRLHCGCIASRFMMELL 83
Query: 106 PNGFG----ALTKKDSDDTQTPMLENRVVGDGTAEGKLTQLCRIMEANEPSFLAPFQRGD 161
NG G + KK + E+ D + + ++E L FQR D
Sbjct: 84 ENG-GVTCISCAKKSGLISMNVSHESNGK-DFPSFASAEHVGSVLERTNLKHLLHFQRID 141
Query: 162 TIVSLGQEKREELRLP 177
S Q K+EE LP
Sbjct: 142 PTHSSLQMKQEESLLP 157
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 219 (82.2 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 41/101 (40%), Positives = 64/101 (63%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLRVQDVKGKE-WVFQFRFWPNN 388
LF+K L SD + R++LPK AEA+ P + EG+P+R++D+ G W F++R+WPNN
Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYRYWPNN 150
Query: 389 NSRMYVLEGVTPCIQSMQLRAGDTSMIHSILTRDDKITFSR 429
NSRMYVLE + + L+ GD M++ L ++ + +R
Sbjct: 151 NSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQAR 191
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 205 (77.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 43/109 (39%), Positives = 65/109 (59%)
Query: 310 RITDQELQQLSGDLNSTIVPLFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLR 369
R T E +Q D N L +K+L SD G +GR+VLPK AE + P + +GV +
Sbjct: 518 RSTASEKRQAKTDKNLRF--LLQKVLKQSDVGSLGRIVLPKE-AEVHLPELKTRDGVSIP 574
Query: 370 VQDVKGKE-WVFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTSMIHS 417
++D+ + W ++RFWPNN SRMY+LE ++S +L+ GD +I+S
Sbjct: 575 MEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYS 623
Score = 51 (23.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 206 SMLDVRDMPESLAQRSSSMSLGVP--AGCSNFV--PPFSNGAAD--GREPCKAHPSFQQG 259
S + + P+ + R++ + P AGC ++ PP + + +P P+ +
Sbjct: 435 SQIHISGHPQEPSPRAAHSAPVTPSSAGCRSWGIWPPAAQIIQNPLSNKP-NPPPATSKQ 493
Query: 260 QRSRPILPKPS-KTGLTISSET-KKSTASQLRIAR 292
+ P PKP + T +E+ ++STAS+ R A+
Sbjct: 494 PKPSPEKPKPKPQAAATAGAESLQRSTASEKRQAK 528
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 204 (76.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLRVQDVKGKE-WVFQFRFWPNN 388
+ K L+ SD G IGR+V+PK AEA+ P + Q EGV L++ D K + W F++RFWPNN
Sbjct: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYRFWPNN 355
Query: 389 NSRMYVLEGVTPCIQSMQLRAGDTSMIH 416
SRMYVLE ++ L+ GD +I+
Sbjct: 356 KSRMYVLESTGGFVKQHVLQTGDIFIIY 383
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 191 (72.3 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 44/110 (40%), Positives = 65/110 (59%)
Query: 310 RITDQE--LQQLSGDLNSTIVPLFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVP 367
+I+D++ QQ + D N + L EK L SD G +GR+VLPK AEA P +S EG+
Sbjct: 149 QISDKKDSYQQSTFD-NKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIV 207
Query: 368 LRVQDVKGKE-WVFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTSMIH 416
++++DV + W F+++FW NN SRMYVLE ++ GD I+
Sbjct: 208 VQMRDVFSMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIY 257
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 199 (75.1 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 36/89 (40%), Positives = 57/89 (64%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLRVQDV-KGKEWVFQFRFWPNN 388
L +K+L SD G +GR+VLPK AE + P + +G+ L ++D+ + W ++RFWPNN
Sbjct: 571 LLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWPNN 630
Query: 389 NSRMYVLEGVTPCIQSMQLRAGDTSMIHS 417
SRMY+LE +++ L+ GD +I+S
Sbjct: 631 KSRMYLLENTGDFVKTNGLQEGDFIVIYS 659
Score = 44 (20.5 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 106 PNGFGALTKKDSDDTQTPMLENRVVGD 132
PN ++ D PM+EN GD
Sbjct: 206 PNLMDQTLERQEDQVVVPMMENNSGGD 232
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 191 (72.3 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 46/125 (36%), Positives = 73/125 (58%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVP-LRVQDVKGKE-WVFQFRFWPN 387
+ +K L SD ++GR+VLPK AEAY P ++ +G L + D++ + W F++R+WPN
Sbjct: 180 ILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMHDLQNAQLWTFKYRYWPN 239
Query: 388 NNSRMYVLEGVTPCIQSMQLRAGDTSMIHSILTRDDKITFSRIDPGGKLVMGFRKAPIPG 447
N SRMYVLE +++ L+ GD+ +I+ +DD+ + V+G +KA G
Sbjct: 240 NKSRMYVLENTGDYVRTHDLQLGDSIVIY----KDDE--------NNRFVIGAKKA---G 284
Query: 448 DMQDA 452
D Q A
Sbjct: 285 DQQAA 289
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 174 (66.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 58/212 (27%), Positives = 100/212 (47%)
Query: 314 QELQQLSGDLNSTIVPLFEKILSASDAGRIGRLVLPKACAEAYFPHISQS-----EGVPL 368
Q+ QQ D+ LFEK L+ SD G++ RLV+PK AE YFP + + +G+ L
Sbjct: 21 QQQQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLL 80
Query: 369 RVQDVKGKEWVFQFRFWPNNNSRMYVL-EGVTPCIQSMQLRAGDTSMIHSILTRDDKITF 427
+D +GK W F++ +W N+S+ YVL +G + ++ L AGD + H R D
Sbjct: 81 CFEDEEGKPWRFRYSYW--NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHR--HRSD---- 132
Query: 428 SRIDPGGKLVMGFRKAPIPGDMQDAQTSAITNGCPGESFLSGVTENLPTVSGYSGHFQML 487
GG+ +G+R+ D+ +N + + + + + G S ++
Sbjct: 133 -----GGRFFIGWRRRGDSSSSSDSYRHVQSNASL-QYYPHAGAQAVESQRGNSKTLRLF 186
Query: 488 KGSKDPHIDALSEHLSLAEGGNGWHKSENHGQ 519
+ + +D+ S +G N + + NH Q
Sbjct: 187 GVNMECQLDSDWSEPSTPDGSNTY--TTNHDQ 216
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 182 (69.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 37/91 (40%), Positives = 56/91 (61%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLRVQD-VKGKEWVFQFRFWPNN 388
+ K L+ SD G +GR+VLPK AEA P + Q + + L + D V W F++R+WPNN
Sbjct: 252 ILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNN 311
Query: 389 NSRMYVLEGVTPCIQSMQLRAGDTSMIHSIL 419
SRMY+L+ +++ L+AGD +I+ L
Sbjct: 312 KSRMYILDSAGEFLKTHGLQAGDVIIIYKNL 342
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 169 (64.5 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 36/95 (37%), Positives = 56/95 (58%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQSEGVPLRVQDVKGKEWVFQFRFWPNNN 389
+F+K+L+ SD G++ RLV+PK AE +FP G L QD GK W F++ +W N+
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDFQDKNGKMWRFRYSYW--NS 92
Query: 390 SRMYVL-EGVTPCIQSMQLRAGDTSMIHSILTRDD 423
S+ YV+ +G + ++ +L AGDT + DD
Sbjct: 93 SQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDD 127
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQS---EGVPLRVQDVKGKEWVFQFRFWP 386
LFEK ++ SD G++ RLV+PK AE +FP S + +GV L +DV GK W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW- 245
Query: 387 NNNSRMYVL-EGVTPCIQSMQLRAGD 411
N+S+ YVL +G + ++ LRAGD
Sbjct: 246 -NSSQSYVLTKGWSRFVKEKNLRAGD 270
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/87 (43%), Positives = 56/87 (64%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQS----EGVPLRVQDVKGKEWVFQFRFW 385
LFEK ++ SD G++ RLV+PK AE +FP S S +GV + +DV GK W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 386 PNNNSRMYVL-EGVTPCIQSMQLRAGD 411
N+S+ YVL +G + ++ LRAGD
Sbjct: 247 --NSSQSYVLTKGWSRFVKEKNLRAGD 271
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 162 (62.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/85 (38%), Positives = 57/85 (67%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQS--EGVPLRVQDVKGKEWVFQFRFWPN 387
+F+K+++ SD G++ RLV+PK AE +FP S S +G+ L +D+ GK W F++ +W
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW-- 91
Query: 388 NNSRMYVL-EGVTPCIQSMQLRAGD 411
N+S+ YV+ +G + ++ +L AGD
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGD 116
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 159 (61.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 34/85 (40%), Positives = 54/85 (63%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQSE--GVPLRVQDVKGKEWVFQFRFWPN 387
+F+K+++ SD G++ RLV+PK AE YFP S + G L QD GK W F++ +W
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYW-- 112
Query: 388 NNSRMYVL-EGVTPCIQSMQLRAGD 411
N+S+ YV+ +G + ++ +L AGD
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGD 137
Score = 41 (19.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 469 GVTENLPTVSGYSGHFQML 487
G N PT S YS F L
Sbjct: 176 GFNFNFPTTSQYSNRFHPL 194
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 151 (58.2 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 36/93 (38%), Positives = 57/93 (61%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFP----------HISQSEGVPLRVQDVKGKEWV 379
LFEK ++ SD G++ RLV+PK AE +FP + S ++GV + ++D GK W
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWR 253
Query: 380 FQFRFWPNNNSRMYVL-EGVTPCIQSMQLRAGD 411
F++ +W N+S+ YVL +G + ++ LRAGD
Sbjct: 254 FRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGD 284
Score = 45 (20.9 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 274 LTISSETKKSTASQLRIARPPA 295
L+IS+ K +T ++ +++ PPA
Sbjct: 16 LSISTTPKPTTTTEKKLSSPPA 37
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/95 (41%), Positives = 54/95 (56%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFP-----------HISQSE-GVPLRVQDVKGKE 377
LFEK L+ SD G++ RLV+PK AE YFP S SE G+ L +D GK
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 378 WVFQFRFWPNNNSRMYVL-EGVTPCIQSMQLRAGD 411
W F++ +W N+S+ YVL +G + ++ QL GD
Sbjct: 105 WRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGD 137
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 151 (58.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 36/89 (40%), Positives = 57/89 (64%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFP------HISQSEGVPLRVQDVKGKEWVFQFR 383
LFEK ++ SD G++ RLV+PK AE +FP ++S +G+ L +DV GK W F++
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSV-KGMLLNFEDVNGKVWRFRYS 240
Query: 384 FWPNNNSRMYVL-EGVTPCIQSMQLRAGD 411
+W N+S+ YVL +G + ++ +L AGD
Sbjct: 241 YW--NSSQSYVLTKGWSRFVKEKRLCAGD 267
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 256 FQQGQRSRPILPKPSKTGLTISSETKKSTASQLRIARPPAEGR 298
++ G + +L + + + +E++K +S+ + P GR
Sbjct: 30 YRMGSGTSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGR 72
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 33/102 (32%), Positives = 58/102 (56%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFPHISQS-----EGVPLRVQDVKGKEWVFQFRF 384
+F+K+++ SD G++ RLV+PK AE YFP + + +G+ L +D G W F++ +
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 81
Query: 385 WPNNNSRMYVL-EGVTPCIQSMQLRAGDTSMIHSILTRDDKI 425
W N+S+ YV+ +G + ++ +L AGD DK+
Sbjct: 82 W--NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKL 121
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 140 (54.3 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 330 LFEKILSASDAGRIGRLVLPKACAEAYFP------------HISQSE-GVPLRVQDVKGK 376
LFEK L+ SD G++ RLV+PK AE YFP ++ +E G+ L +D GK
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 377 EWVFQFRFWPNNNSRMYVL-EGVTPCIQSMQLRAGD 411
W F++ +W N+S+ YVL +G + ++ L AGD
Sbjct: 88 CWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGD 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 582 571 0.00080 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 621 (66 KB)
Total size of DFA: 347 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.36u 0.12s 50.48t Elapsed: 00:00:02
Total cpu time: 50.36u 0.12s 50.48t Elapsed: 00:00:02
Start: Fri May 10 23:25:16 2013 End: Fri May 10 23:25:18 2013