Your job contains 1 sequence.
>039387
MPPTAANKKRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGEDGH
YYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWK
SSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDG
QGIKTSIKVHEPRICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNAVHHEPTTSTSRL
LSLPLALIGNPVNEQGAAGKQLAENAEISMPHTDKDTTDKLLILRDVMLESMKSHDKLLQ
ASKSAPIQNRTMVWAVSWFQLL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039387
(322 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 207 2.2e-15 2
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 198 4.9e-14 2
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 182 7.0e-14 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 198 1.3e-13 2
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 198 1.8e-13 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 201 2.4e-13 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 201 8.1e-13 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 198 8.3e-13 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 198 8.6e-13 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 201 8.7e-13 2
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 201 8.8e-13 2
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 201 8.8e-13 2
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 201 8.8e-13 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 201 8.8e-13 2
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 201 8.8e-13 2
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 201 9.0e-13 2
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 201 9.0e-13 2
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 201 9.1e-13 2
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 200 1.0e-12 2
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 191 1.8e-12 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 196 1.8e-12 3
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 198 2.6e-12 2
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 189 2.8e-12 1
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 190 3.7e-12 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 196 4.1e-12 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 196 4.2e-12 2
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 182 6.4e-12 1
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 186 7.4e-12 1
ZFIN|ZDB-GENE-030131-6456 - symbol:phf21ab "PHD finger pr... 186 1.3e-11 1
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 190 1.4e-11 1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 190 1.4e-11 1
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 190 1.5e-11 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 189 1.8e-11 1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 189 1.8e-11 1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 189 1.8e-11 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 189 1.9e-11 1
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 191 2.0e-11 2
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 182 2.1e-11 1
UNIPROTKB|F1NMG7 - symbol:F1NMG7 "Uncharacterized protein... 182 2.4e-11 1
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 181 2.9e-11 1
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 176 3.9e-11 2
UNIPROTKB|F1NRM1 - symbol:F1NRM1 "Uncharacterized protein... 177 7.8e-11 1
UNIPROTKB|J3QQU3 - symbol:PHF12 "PHD finger protein 12" s... 154 1.1e-10 1
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 176 1.1e-10 1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 189 1.2e-10 2
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 175 1.2e-10 1
ZFIN|ZDB-GENE-121031-4 - symbol:chd3 "chromodomain helica... 173 1.5e-10 1
UNIPROTKB|K7EJ43 - symbol:PHF12 "PHD finger protein 12" s... 156 1.9e-10 1
UNIPROTKB|F1NP02 - symbol:PHF21A "Uncharacterized protein... 173 2.8e-10 1
UNIPROTKB|F1P5P6 - symbol:PHF21A "Uncharacterized protein... 173 3.1e-10 1
UNIPROTKB|I3LDB0 - symbol:I3LDB0 "Uncharacterized protein... 171 4.2e-10 1
UNIPROTKB|F1M5S0 - symbol:RGD1560612 "Protein RGD1560612"... 171 4.3e-10 1
UNIPROTKB|F1MS13 - symbol:PHF21A "Uncharacterized protein... 171 5.1e-10 1
RGD|1560612 - symbol:Phf21a "PHD finger protein 21A" spec... 171 5.2e-10 1
MGI|MGI:2384756 - symbol:Phf21a "PHD finger protein 21A" ... 171 5.4e-10 1
UNIPROTKB|F1PQV6 - symbol:PHF21A "Uncharacterized protein... 171 5.7e-10 1
UNIPROTKB|Q96BD5 - symbol:PHF21A "PHD finger protein 21A"... 171 5.7e-10 1
UNIPROTKB|K7EQP5 - symbol:PHF12 "PHD finger protein 12" s... 147 6.3e-10 1
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 170 8.4e-10 2
UNIPROTKB|H0YEK2 - symbol:PHF21A "PHD finger protein 21A"... 141 2.9e-09 1
UNIPROTKB|F1SJU8 - symbol:PHF21B "Uncharacterized protein... 162 3.0e-09 1
UNIPROTKB|F1SNJ6 - symbol:LOC100620590 "Uncharacterized p... 157 4.3e-09 1
UNIPROTKB|H0YF52 - symbol:TRIM66 "Tripartite motif-contai... 155 6.0e-09 1
UNIPROTKB|B1AHC5 - symbol:PHF21B "cDNA FLJ34161 fis, clon... 156 7.2e-09 1
RGD|1308739 - symbol:Phf21b "PHD finger protein 21B" spec... 158 1.1e-08 1
UNIPROTKB|F1NX82 - symbol:PHF21B "Uncharacterized protein... 157 1.1e-08 1
UNIPROTKB|F1N7W5 - symbol:LOC788840 "Uncharacterized prot... 157 1.4e-08 1
UNIPROTKB|Q96EK2 - symbol:PHF21B "PHD finger protein 21B"... 156 2.0e-08 1
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 162 2.1e-08 1
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 162 2.1e-08 1
UNIPROTKB|Q5TH12 - symbol:ZMYND8 "Protein kinase C-bindin... 133 2.3e-08 1
ZFIN|ZDB-GENE-030131-5913 - symbol:trim24 "tripartite mot... 158 2.8e-08 1
MGI|MGI:2152406 - symbol:Trim66 "tripartite motif-contain... 159 3.0e-08 1
UNIPROTKB|F1NBP6 - symbol:F1NBP6 "Uncharacterized protein... 158 3.0e-08 1
UNIPROTKB|C9J9G2 - symbol:PHF12 "PHD finger protein 12" s... 156 3.1e-08 1
RGD|1595847 - symbol:Trim66 "tripartite motif-containing ... 159 3.1e-08 1
ZFIN|ZDB-GENE-040724-145 - symbol:trim66 "tripartite moti... 158 3.4e-08 1
MGI|MGI:1924057 - symbol:Phf12 "PHD finger protein 12" sp... 157 3.8e-08 1
UNIPROTKB|F1MD96 - symbol:F1MD96 "Uncharacterized protein... 158 3.9e-08 1
UNIPROTKB|Q2TAK2 - symbol:PHF12 "PHF12 protein" species:9... 156 4.0e-08 1
UNIPROTKB|O15164 - symbol:TRIM24 "Transcription intermedi... 157 4.1e-08 1
UNIPROTKB|E2RNG5 - symbol:LOC609728 "Uncharacterized prot... 157 4.1e-08 1
UNIPROTKB|F1MP49 - symbol:TRIM24 "Uncharacterized protein... 157 4.1e-08 1
UNIPROTKB|E2QYC0 - symbol:PHF12 "Uncharacterized protein"... 156 4.4e-08 1
UNIPROTKB|D4AC30 - symbol:D4AC30 "Uncharacterized protein... 155 4.6e-08 1
ZFIN|ZDB-GENE-030131-2773 - symbol:trim33 "tripartite mot... 157 4.7e-08 1
UNIPROTKB|E1B7A1 - symbol:PHF12 "Uncharacterized protein"... 156 5.0e-08 1
UNIPROTKB|Q96QT6 - symbol:PHF12 "PHD finger protein 12" s... 156 5.0e-08 1
UNIPROTKB|F1RNA4 - symbol:PHF12 "Uncharacterized protein"... 156 5.0e-08 1
UNIPROTKB|D4A9U0 - symbol:Phf21b "PHD finger protein 21B ... 152 5.0e-08 1
MGI|MGI:109275 - symbol:Trim24 "tripartite motif-containi... 156 5.2e-08 1
UNIPROTKB|F1P4C7 - symbol:TRIM24 "Uncharacterized protein... 155 5.8e-08 1
UNIPROTKB|F1LM99 - symbol:F1LM99 "Uncharacterized protein... 155 6.4e-08 1
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 156 6.6e-08 1
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 156 6.8e-08 1
DICTYBASE|DDB_G0277341 - symbol:DDB_G0277341 "PHD zinc fi... 154 7.4e-08 1
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 155 7.5e-08 1
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 156 7.9e-08 1
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 156 8.0e-08 1
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 156 8.1e-08 1
WARNING: Descriptions of 236 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 207 (77.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 36/71 (50%), Positives = 45/71 (63%)
Query: 36 SLDSPDLKDNGSLDKRQYTIGEDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLED 94
S + + D+G D ED H+ E C +C +GGELLCCDTCP++YHL CL PPL D
Sbjct: 432 SSEGEEENDDGRRDDGDVE-EEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPD 490
Query: 95 VPPGSWKCPSC 105
+P G W CP C
Sbjct: 491 IPNGEWICPRC 501
Score = 174 (66.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 40/110 (36%), Positives = 54/110 (49%)
Query: 14 KRKRKSLPW---GEGALNSYA--GASLSLDSPDLKDNGSLDKRQYTIGEDGHYYE----- 63
KRKR S GE +S++ S S S K++ + ED YE
Sbjct: 317 KRKRSSSGEEDDGESDFDSFSVSDGSNSRSSRSKNKKAKSSKKKKKMDEDADGYETDHQD 376
Query: 64 -CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C GGE++ CDTCP YH+ CL P +E P G+W CP C E E ++
Sbjct: 377 YCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHC-EKEGIQ 425
Score = 59 (25.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 27/108 (25%), Positives = 41/108 (37%)
Query: 121 SSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDG 180
SS KK K K+ EKD + EK SK N D + + + G
Sbjct: 1614 SSAKKEEKTDKESEASSEKDGGSRENEKDGEK---EKSAESKENMSSDVKADGSDATNSG 1670
Query: 181 QGIKTSIKVHEPRICRGRHSNKEAMTESKDV-DSKKSIRVQDSSTATN 227
KT + E ++ A E K++ D K ++ +DS+ N
Sbjct: 1671 DSTKTKEESSEEKM-----DTSPASDEKKELKDEKDGVKPEDSAKLQN 1713
Score = 49 (22.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 24/133 (18%), Positives = 56/133 (42%)
Query: 98 GSWKCPSCSELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEK 157
G W P ELE+ ++ + K + Q + + + + +D++ L EK
Sbjct: 1526 GQWSMPWMKELEESKRAAAIAAGEDPKTPSTGTPADTQP-NTPAPEDLSKTEDIKELEEK 1584
Query: 158 -QTVSKRNTFGDNEECSTKDV-DDGQGIKTSIKVHEPRICRGRHSNKE---AMTESKDVD 212
+ ++ G +E ++ D+G+ +S K E S+++ + KD +
Sbjct: 1585 TEGDGEKEVKGSRQEDEIIEIPDEGEKSPSSAKKEEKTDKESEASSEKDGGSRENEKDGE 1644
Query: 213 SKKSIRVQDSSTA 225
+KS +++ ++
Sbjct: 1645 KEKSAESKENMSS 1657
Score = 45 (20.9 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 124 KKSILASKLVMQ--VRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEE 171
KK ++ + LV++ + K S S E DD+ +Q GDN+E
Sbjct: 1199 KKKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEQLFKDELGEGDNKE 1248
Score = 42 (19.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1867 EVECLAESHQHLSKESMSGN 1886
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 198 (74.8 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
D D ++ G ++ ED H C +C +GGELLCCD CP++YHL CL PPL ++P
Sbjct: 330 DDDDEEEEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPN 384
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 385 GEWLCPRCTCPPLKGKVQRILH-WR 408
Score = 168 (64.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 271 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 325
Score = 57 (25.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 124 KKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQG 182
K+ IL KL + + H S F DD + EK+ + + GD EE +D G
Sbjct: 1572 KEKIL-DKLELSLIHSRGDGSDFRPDDTKA-EEKEPIETQQN-GDKEEDEEGKKEDRNG 1627
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 182 (69.1 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C +GGEL+CCD CP +HL CL+PPL ++P G+W+C SC
Sbjct: 91 ECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 198 (74.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
D D ++ G ++ ED H C +C +GGELLCCD CP++YHL CL PPL ++P
Sbjct: 398 DDDDEEEEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPN 452
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 453 GEWLCPRCTCPPLKGKVQRILH-WR 476
Score = 168 (64.2 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 393
Score = 54 (24.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 124 KKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQG 182
K+ IL KL + + H S DD + EK+ + + GD EE +D +G
Sbjct: 1644 KEKIL-DKLELSLIHSRGDSSELRPDDTKA-EEKEPIETQQN-GDKEEDDEGKKEDKKG 1699
Score = 42 (19.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1831 EVECLAESHQHLSKESLAGN 1850
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 198 (74.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
D D ++ G ++ ED H C +C +GGELLCCD CP++YHL CL PPL ++P
Sbjct: 261 DDDDEEEEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPN 315
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 316 GEWLCPRCTCPPLKGKVQRILH-WR 339
Score = 168 (64.2 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 202 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 256
Score = 52 (23.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 108 LEDLEK-PIS--HLWKSSF--KKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSK 162
LE+ EK P S L K +K + KL + + H + F DD + EK+ +
Sbjct: 1480 LEETEKAPPSPEQLPKEEMLPEKEKILDKLELSLIHSRGDGNDFRPDDTR-VEEKEPIET 1538
Query: 163 RNTFGDNEECSTKDVDDGQG 182
+ GD E+ +D G
Sbjct: 1539 QQN-GDKEDDEEGKKEDKNG 1557
Score = 42 (19.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1689 EVECLAESHQHLSKESLAGN 1708
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 201 (75.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 51/155 (32%), Positives = 74/155 (47%)
Query: 40 PDLKDNG--SLDKRQYTIGEDGHYYE---CLICCNGGELLCCDTCPNTYHLQCLTPPLED 94
PD K G S DKR T + + + C +C +GG+LLCCD+CP+ YH CL+PPL+
Sbjct: 9 PDWKTPGKASKDKRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKS 68
Query: 95 VPPGSWKCPSCSELED-LEKPISHLWKSSFKKSILASKLVMQVRH--KESSQSFFEKDDV 151
+P G W CP C L EK +S W + SK + + K S++ + +
Sbjct: 69 IPKGDWICPRCIPLPGKAEKILSWRWALDRSVELRTSKGEKRREYFIKWHGMSYWHCEWI 128
Query: 152 E----CLAEKQTVSKRNTFGDNEECSTKDVDDGQG 182
L V+ D EE S +++DD G
Sbjct: 129 PEGQMLLHHASMVASFQRRSDMEEPSLEELDDQDG 163
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 201 (75.8 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 37/85 (43%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
D D +D G ++ ED H C +C +GGELLCCD CP++YHL CL PPL ++P
Sbjct: 343 DDDDDEDEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPN 397
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 398 GEWLCPRCTCPPLKGKVQRILH-WR 421
Score = 168 (64.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 284 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 338
Score = 42 (19.8 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1723 EVECLAESHQHLSKESLAGN 1742
Score = 40 (19.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 124 KKSILASKLVMQ--VRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQ 181
K+ ++ + LV++ + K S + E DD+ ++ + K + GDN KDV+D
Sbjct: 1109 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEE-LFKDDVEGDN-----KDVEDSS 1162
Query: 182 GI 183
I
Sbjct: 1163 VI 1164
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 198 (74.8 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
D D ++ G ++ ED H C +C +GGELLCCD CP++YHL CL PPL ++P
Sbjct: 372 DDDDEEEEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPN 426
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 427 GEWLCPRCTCPPLKGKVQRILH-WR 450
Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 313 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 367
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 198 (74.8 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
D D ++ G ++ ED H C +C +GGELLCCD CP++YHL CL PPL ++P
Sbjct: 398 DDDDEEEEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPN 452
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 453 GEWLCPRCTCPPLKGKVQRILH-WR 476
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 393
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 201 (75.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 437 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Score = 164 (62.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 359 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 413
Score = 42 (19.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1817 EVECLAESHQHLSKESMAGN 1836
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 201 (75.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 444 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Score = 164 (62.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 366 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 420
Score = 42 (19.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1824 EVECLAESHQHLSKESMAGN 1843
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 201 (75.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 444 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Score = 164 (62.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 366 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 420
Score = 42 (19.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1824 EVECLAESHQHLSKESMAGN 1843
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 201 (75.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 444 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
Score = 164 (62.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 366 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 420
Score = 42 (19.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1824 EVECLAESHQHLSKESMAGN 1843
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 201 (75.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 437 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Score = 164 (62.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 359 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 413
Score = 42 (19.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1827 EVECLAESHQHLSKESMAGN 1846
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 201 (75.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 437 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
Score = 164 (62.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 359 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 413
Score = 42 (19.8 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1827 EVECLAESHQHLSKESMAGN 1846
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 201 (75.8 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 464 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 514
Score = 164 (62.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 386 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 440
Score = 42 (19.8 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1844 EVECLAESHQHLSKESMAGN 1863
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 201 (75.8 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 466 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 516
Score = 164 (62.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 388 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 442
Score = 42 (19.8 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1846 EVECLAESHQHLSKESMAGN 1865
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 201 (75.8 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCDTCP++YH+ CL PPL ++P G W CP C+
Sbjct: 465 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 515
Score = 164 (62.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YH+ CL P +E P G W CP C E E ++
Sbjct: 387 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 441
Score = 42 (19.8 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1861 EVECLAESHQHLSKESMAGN 1880
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 200 (75.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H C +C +GGELLCCDTCP++YHL CL PPL ++P G W CP C+
Sbjct: 341 EDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCT 390
Score = 171 (65.3 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 40/115 (34%), Positives = 56/115 (48%)
Query: 3 PTAANKKRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGE-DG-- 59
P+ K + +R+ + ++NS + S S L G +++ I E DG
Sbjct: 212 PSKRKKGSSSEEEEREESDFDSASINSSSVRSEC--SAGLGKRGKRRRKKKRIEEGDGYE 269
Query: 60 --HYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 270 TDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 323
Score = 42 (19.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1743 EVECLAESHQHLSKESLAGN 1762
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 38/103 (36%), Positives = 57/103 (55%)
Query: 4 TAANKKRIVMKRKRKSLPWGEGALNSYAGASLSLDSPD-LKDNGSLDKRQYTIGEDGHYY 62
T ++ + +++ K P EG + AG + +P L L ++ ED
Sbjct: 246 TRSSGLKTLVRAKGAQAPAPEGGGDPRAGQPGRVQAPPALPSEPQLQQKN----ED---- 297
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C +GGEL+CCD CP +HL CL+PPL D+P G+W+C SC
Sbjct: 298 ECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSC 340
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 196 (74.1 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS--ELEDLEKP 114
ED H C +C +GGELLCCD CP++YHL CL PPL ++P G W CP C+ L+ +
Sbjct: 410 EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQR 469
Query: 115 ISHLWK 120
I H W+
Sbjct: 470 ILH-WR 474
Score = 168 (64.2 bits), Expect = 8.3e-09, Sum P(3) = 8.3e-09
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 337 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 391
Score = 43 (20.2 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 125 KSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQG 182
K + KL + + H F DD + ++ T +++N GD EE +D G
Sbjct: 1642 KEPVPDKLELSLSHSND----FRPDDPKAEEKEPTETQQN--GDREEDEEGKKEDKNG 1693
Score = 42 (19.8 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1825 EVECLAESHQHLSKESLAGN 1844
Score = 41 (19.5 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 18/63 (28%), Positives = 23/63 (36%)
Query: 3 PTAANKKRIVMKR----KRKSLPWGEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGED 58
PT KK++ K+ KRK E N G S L LD Y ED
Sbjct: 94 PTKKKKKKLKEKKEKKAKRKKRDEDEED-NEDGGLKEPKSSGQLMAEWGLDDVDYLFSED 152
Query: 59 GHY 61
++
Sbjct: 153 DYH 155
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 198 (74.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
D D ++ G ++ ED H C +C +GGELLCCD CP++YHL CL PPL ++P
Sbjct: 314 DDDDEEEEGGCEEE-----EDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPN 368
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 369 GEWLCPRCTCPPLKGKVQRILH-WR 392
Score = 168 (64.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
E H C +C GGE++ CDTCP YHL CL P LE P G W CP C E E ++
Sbjct: 255 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC-EKEGIQ 309
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 124 KKSILASKLVMQ--VRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQ 181
K+ ++ + LV++ + K S + E DD+ ++ + K + GDN KDV+D
Sbjct: 1079 KRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEE-LFKDDVEGDN-----KDVEDSS 1132
Query: 182 GI 183
I
Sbjct: 1133 VI 1134
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 189 (71.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS--ELEDLEKP 114
ED H C +C +GGELLCCD C ++YH+ CL PPL D+P G W CP C+ L+ +
Sbjct: 323 EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK 382
Query: 115 ISHLWK 120
I H W+
Sbjct: 383 ILH-WR 387
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 246 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 296
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 190 (71.9 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
+ D ++ G +++ ED H C +C +GGELLCCD C ++YH+ CL PPL D+P
Sbjct: 449 EEEDYEEEGEEGEKEE---EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPN 505
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 506 GEWLCPRCTCPVLKGRVQKILH-WR 529
Score = 163 (62.4 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 389 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 439
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 196 (74.1 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCD CP++YH+ CL PPL ++P G W CP C+
Sbjct: 414 EDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCT 464
Score = 168 (64.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 24 EGALNSYAGASLSLDSPDLKDNGSLDKRQYTIG-EDGHYYECLICCNGGELLCCDTCPNT 82
+G+ + + + L + K G D G E H C +C GGE++ CDTCP
Sbjct: 302 DGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYETDHQDYCEVCQQGGEIILCDTCPRA 361
Query: 83 YHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
YH+ CL P +E P G W CP C E E ++
Sbjct: 362 YHMVCLDPDMEKAPEGKWSCPHC-EKEGIQ 390
Score = 42 (19.8 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1803 EVECLAESHQHLSKESMAGN 1822
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 254 EQGAAGKQLAENAE 267
E+GA+ K+ E+AE
Sbjct: 1536 EEGASNKEQGESAE 1549
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 196 (74.1 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 57 EDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
ED H+ E C +C +GGELLCCD+CP++YH+ CL PPL ++P G W CP C+
Sbjct: 425 EDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCT 475
Score = 174 (66.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 24 EGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGEDGHYYE------CLICCNGGELLCCD 77
+G++NS + ++ S K++ EDG YE C +C GGE++ CD
Sbjct: 310 DGSINSVSVSNGSNSRSSRSSAKKKPKKKTKKDEDGDGYETDHQDYCEVCQQGGEIILCD 369
Query: 78 TCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
TCP YH+ CL P +E P G+W CP C ++
Sbjct: 370 TCPRAYHMVCLDPDMEKAPEGTWSCPHCEKM 400
Score = 42 (19.8 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1844 EVECLAESHQHLSKESMSGN 1863
Score = 39 (18.8 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 13/68 (19%), Positives = 28/68 (41%)
Query: 148 KDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTE 207
K++ E E + +++ G EE ++ G + + +P+ +A E
Sbjct: 1597 KEEKEKTPESSSEAEKAD-GKQEEKEEENAKSGDSEEKTDDTDKPKGSEADKETSDAKGE 1655
Query: 208 SKDVDSKK 215
KD + +K
Sbjct: 1656 KKDDEPEK 1663
Score = 37 (18.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 15/74 (20%), Positives = 33/74 (44%)
Query: 155 AEKQTVSKRNTFGDNEECSTKD-----VDDGQGIKTSIKVHEPRICRGRHSNKEAMTESK 209
A+K+ V +N G+ E K+ V D G S + + + E+ +E++
Sbjct: 1554 ADKEKV--KNGDGEKEANENKNSEVIAVPDEDGRAASASEEKEKGKEEKEKTPESSSEAE 1611
Query: 210 DVDSKKSIRVQDSS 223
D K+ + ++++
Sbjct: 1612 KADGKQEEKEEENA 1625
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 182 (69.1 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C +GGEL+CCD CP +HL CL+PPL ++P G+W+C SC
Sbjct: 91 ECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 186 (70.5 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C +GGEL+CCD CP +HL CL+PPL D+P G+W+C SC
Sbjct: 306 ECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSC 348
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 57/189 (30%), Positives = 92/189 (48%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+++P G W CP C + + L+K
Sbjct: 456 DGDIHEDFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGMWICPKCQD-QILKKEE 514
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNE--EC- 172
+ W + +I+ S + + +E Q K E E++ + +R N +C
Sbjct: 515 AIPWPGTL--AIVHSYIAYKEAKEEEKQKLM-KWSAELKLEREQLEQRVKQLSNSITKCM 571
Query: 173 STKD--VDDGQGIKTSI-KV-HEPRICRGRHSNKEAMTES-KDV--DSKKSIRVQDSSTA 225
TK+ + + ++ S+ KV H R+ + + + TE+ KD D +S ++DS
Sbjct: 572 ETKNSILARQKDMQASLEKVKHLVRLIQSFNFTQPMETETLKDSKQDCAESGSIKDSKDT 631
Query: 226 TNA-VHHEP 233
T V P
Sbjct: 632 TQVCVQESP 640
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
+ D ++ G +++ ED H C +C +GGELLCCD C ++YH+ CL PPL D+P
Sbjct: 392 EEEDYEEEGEEGEKEE---EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPN 448
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 449 GEWLCPRCTCPVLKGRVQKILH-WR 472
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 332 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 382
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
+ D ++ G +++ ED H C +C +GGELLCCD C ++YH+ CL PPL D+P
Sbjct: 487 EEEDYEEEGEEGEKEE---EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPN 543
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 544 GEWLCPRCTCPVLKGRVQKILH-WR 567
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 427 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 477
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 190 (71.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 38 DSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPP 97
+ D ++ G +++ ED H C +C +GGELLCCD C ++YH+ CL PPL D+P
Sbjct: 487 EEEDYEEEGEEGEKEE---EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPN 543
Query: 98 GSWKCPSCS--ELEDLEKPISHLWK 120
G W CP C+ L+ + I H W+
Sbjct: 544 GEWLCPRCTCPVLKGRVQKILH-WR 567
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 427 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 477
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 189 (71.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS--ELEDLEKP 114
ED H C +C +GGELLCCD C ++YH+ CL PPL D+P G W CP C+ L+ +
Sbjct: 448 EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK 507
Query: 115 ISHLWK 120
I H W+
Sbjct: 508 ILH-WR 512
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 371 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 421
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 189 (71.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS--ELEDLEKP 114
ED H C +C +GGELLCCD C ++YH+ CL PPL D+P G W CP C+ L+ +
Sbjct: 452 EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK 511
Query: 115 ISHLWK 120
I H W+
Sbjct: 512 ILH-WR 516
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 375 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 425
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 189 (71.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS--ELEDLEKP 114
ED H C +C +GGELLCCD C ++YH+ CL PPL D+P G W CP C+ L+ +
Sbjct: 452 EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK 511
Query: 115 ISHLWK 120
I H W+
Sbjct: 512 ILH-WR 516
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 375 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 425
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS--ELEDLEKP 114
ED H C +C +GGELLCCD C ++YH+ CL PPL D+P G W CP C+ L+ +
Sbjct: 511 EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK 570
Query: 115 ISHLWK 120
I H W+
Sbjct: 571 ILH-WR 575
Score = 163 (62.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 434 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 484
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 191 (72.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
+D H C +C +GGELLCCD+CP+ YH CL PPL+ +P G W+CP CS
Sbjct: 433 DDEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
Score = 177 (67.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 34/86 (39%), Positives = 45/86 (52%)
Query: 23 GEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGEDG-HYYE--CLICCNGGELLCCDTC 79
G GA A + + K N + + GEDG H ++ C +C GGE++ CDTC
Sbjct: 336 GSGAPVVRKKAKTKIGNKFKKKNKLKKTKNFPEGEDGEHEHQDYCEVCQQGGEIILCDTC 395
Query: 80 PNTYHLQCLTPPLEDVPPGSWKCPSC 105
P YHL CL P L++ P G W CP C
Sbjct: 396 PRAYHLVCLEPELDEPPEGKWSCPHC 421
Score = 42 (19.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 150 DVECLAEK-QTVSKRNTFGD 168
+VECLAE Q +SK + G+
Sbjct: 1854 EVECLAESHQHLSKESLAGN 1873
Score = 41 (19.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 178 DDGQGIKTSIKVHEP--RICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNAVHHEP 233
DD QG++ +I ++ +C + + K SK ++V+D H+ P
Sbjct: 649 DDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSK--LKVEDDEDRP-VKHYTP 703
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 182 (69.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C +GGEL+CCD CP +HL CL+PPL ++P G+W+C SC
Sbjct: 298 ECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 182 (69.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
EC +C +GGEL+CCD CP +HL CL PPL VP G+W+C SC E+ P
Sbjct: 458 ECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSCVAKEEEHSP 509
Score = 143 (55.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVP-PGS---WKC 102
EC +C +GGEL+CCD CP +HL CL PPL VP P + W C
Sbjct: 303 ECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNC 346
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 181 (68.8 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC C +GGELLCCD CP +HL CLTPPL ++P G+W+C +C
Sbjct: 306 ECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC 348
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 176 (67.0 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C +GGEL+CCD CP +HL CL+PPL+++P G W+C C
Sbjct: 300 ECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
Score = 43 (20.2 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 1 MPPTAANKKRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIG 56
+PP K+R ++ R + P + + + S S P K G+L+ ++ +G
Sbjct: 125 VPPRPPTKRR-ALEEPRATPPATLASKSISSPGSHSKAKPPKKPEGNLESQRLPLG 179
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 177 (67.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 35/97 (36%), Positives = 54/97 (55%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSS 122
EC +C +GGEL+CCD CP +HL CL PPL VP G W C SC+ + + S ++
Sbjct: 426 ECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSCTGIPETGSHESSA--AA 483
Query: 123 FKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQT 159
++ +LA+KL SS +++++ L + T
Sbjct: 484 GERVLLAAKLE---NGSASSDPMSSREELDALLSEGT 517
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVP-PGS---WKC 102
EC +C +GGEL+CCD CP +HL CL PPL VP P + W C
Sbjct: 294 ECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNC 337
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C +GGEL+CCD CP +HL CL+PPL+++P G W+C C
Sbjct: 300 ECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 189 (71.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS--ELEDLEKP 114
ED H C +C +GGELLCCD C ++YH+ CL PPL D+P G W CP C+ L+ +
Sbjct: 450 EDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK 509
Query: 115 ISHLWK 120
I H W+
Sbjct: 510 ILH-WR 514
Score = 163 (62.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
E H C +C GGE++ CDTCP YHL CL P L+ P G W CP C +
Sbjct: 374 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 424
Score = 37 (18.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 140 ESSQSFFEKDDVECLAEKQTVSKRNTFGDNEE 171
+ S++ EKD+VE EK ++N G+ E
Sbjct: 1563 DGSRTPLEKDEVENQEEKP---EKNRTGEKIE 1591
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
EC +C +GGEL+CCD CP +HL CL PPL +P G+W+C C ++ +H+
Sbjct: 296 ECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNRLKDRTYTHV 351
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 31/65 (47%), Positives = 38/65 (58%)
Query: 50 KRQYTIG-EDGHYYE------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKC 102
K++ +G EDG YE C +C GGE++ CDTCP YHL CL P LE P G W C
Sbjct: 365 KKKKALGDEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSC 424
Query: 103 PSCSE 107
P C +
Sbjct: 425 PHCEK 429
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 156 (60.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 68 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 127
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 128 VRRKKREQKKELGHV 142
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 52/179 (29%), Positives = 85/179 (47%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 407 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQD-QMLKKEE 465
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE-KDDVECLAEK--QTVSK-RNTFGDNEE 171
+ W + +I+ S + + +E Q + D++ E+ Q V + N+ E
Sbjct: 466 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSITKCME 523
Query: 172 CSTKDVDDGQGIKTSI-KVHEP-RICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNA 228
+ + + +S+ KV + R+ +G +K +E V + DS+ TNA
Sbjct: 524 MKNTILAKQKEMHSSLEKVKQLIRLIQGIDLSKPINSEVNSVAISNGM---DSTNNTNA 579
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 173 (66.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 52/179 (29%), Positives = 85/179 (47%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 455 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQD-QMLKKEE 513
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE-KDDVECLAEK--QTVSK-RNTFGDNEE 171
+ W + +I+ S + + +E Q + D++ E+ Q V + N+ E
Sbjct: 514 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSITKCME 571
Query: 172 CSTKDVDDGQGIKTSI-KVHEP-RICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNA 228
+ + + +S+ KV + R+ +G +K +E V + DS+ TNA
Sbjct: 572 MKNTILAKQKEMHSSLEKVKQLIRLIQGIDLSKPINSEVNSVAISNGM---DSTNNTNA 627
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 171 (65.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 363 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD-QMLKKEE 421
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE 147
+ W + +I+ S + + +E Q +
Sbjct: 422 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLK 451
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 171 (65.3 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 377 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQD-QMLKKEE 435
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE 147
+ W + +I+ S + + +E Q +
Sbjct: 436 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLK 465
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 171 (65.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 431 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD-QMLKKEE 489
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE 147
+ W + +I+ S + + +E Q +
Sbjct: 490 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLK 519
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 171 (65.3 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 443 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQD-QMLKKEE 501
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE 147
+ W + +I+ S + + +E Q +
Sbjct: 502 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLK 531
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 171 (65.3 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 463 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQD-QMLKKEE 521
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE 147
+ W + +I+ S + + +E Q +
Sbjct: 522 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLK 551
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 171 (65.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 483 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD-QMLKKEE 541
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE 147
+ W + +I+ S + + +E Q +
Sbjct: 542 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLK 571
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 171 (65.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 58 DGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
DG +E C +C G+LL CDTC YHL CL PPL+ +P G W CP C + + L+K
Sbjct: 483 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD-QMLKKEE 541
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFE 147
+ W + +I+ S + + +E Q +
Sbjct: 542 AIPWPGTL--AIVHSYIAYKAAKEEEKQKLLK 571
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 147 (56.8 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKC 102
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C
Sbjct: 62 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 170 (64.9 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 59 GHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPL--EDVPPGSWKCPSCSELEDLEKPI 115
GH ++ C C GG LLCCD CP+++HLQC PPL ED+P G W C SC + L +P
Sbjct: 50 GHNHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSC-RMSKLSQPP 108
Query: 116 SHLWKSS 122
+ K+S
Sbjct: 109 ASSSKAS 115
Score = 117 (46.2 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 62 YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
+ C C L+ CD CP +H CL PPL +P G W CP+ +E
Sbjct: 260 FYCTRSCKRAPLISCDYCPLYFHQDCLDPPLTALPAGLWMCPNHAE 305
Score = 43 (20.2 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 156 EKQTVSKRNTFGD--NEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTESKDVDS 213
EK+T + NT D N E T++ + + S + ++ EA E + DS
Sbjct: 455 EKRT--ETNTPADKVNGEVDTENPNTESNAQASEQPSVVKVESKTSLEVEASFEEDEEDS 512
Query: 214 KKSIRVQDS 222
KKS + D+
Sbjct: 513 KKSTGIIDA 521
>UNIPROTKB|H0YEK2 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC068385
HGNC:HGNC:24156 EMBL:AC024475 EMBL:AC129913 Ensembl:ENST00000530587
Bgee:H0YEK2 Uniprot:H0YEK2
Length = 116
Score = 141 (54.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 73 LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSFKKSILASKL 132
LL CDTC YHL CL PPL+ +P G W CP C + + L+K + W + +I+ S +
Sbjct: 1 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD-QMLKKEEAIPWPGTL--AIVHSYI 57
Query: 133 VMQVRHKESSQSFFE 147
+ +E Q +
Sbjct: 58 AYKAAKEEEKQKLLK 72
>UNIPROTKB|F1SJU8 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:CU633627
Ensembl:ENSSSCT00000000021 Uniprot:F1SJU8
Length = 450
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 47/158 (29%), Positives = 69/158 (43%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAG--ASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLI 66
KR KR+ + P G L + AS L++P L ++ E H C
Sbjct: 218 KRQERKRRSTANPAYSGLLETERKRLASNFLNTP-LFLTARANEDPCWKSEIAHDEHCAT 276
Query: 67 CCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSFKKS 126
C G L C TCP YHL CL PPL+ P G W CP C + + L+K W +
Sbjct: 277 CKRGANLQPCGTCPGAYHLSCLDPPLKTAPKGVWVCPKCQQ-KALKKDEGVPWTGML--A 333
Query: 127 ILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRN 164
I+ S + + +E Q ++ E +E Q + +R+
Sbjct: 334 IVHSYVTHKTVKEEEKQKLLQRGS-ELQSEHQQLEERD 370
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 157 (60.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGGELLCC+ CP +HL C P L + P G W C C DL KP
Sbjct: 80 CAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC---RDLSKP 127
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 155 (59.6 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 25/49 (51%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP +HL C P L P G W C C L E
Sbjct: 105 CAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 153
>UNIPROTKB|B1AHC5 [details] [associations]
symbol:PHF21B "cDNA FLJ34161 fis, clone FCBBF3014229,
highly similar to PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG080293 HOGENOM:HOG000231466
EMBL:AL049760 EMBL:Z83838 RefSeq:NP_001229379.1 UniGene:Hs.254097
DNASU:112885 GeneID:112885 KEGG:hsa:112885 CTD:112885
HGNC:HGNC:25161 ChiTaRS:PHF21B GenomeRNAi:112885 NextBio:78697
EMBL:AL079301 EMBL:AK091480 IPI:IPI00893566 SMR:B1AHC5
Ensembl:ENST00000403565 UCSC:uc003bfm.3 Uniprot:B1AHC5
Length = 327
Score = 156 (60.0 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 47/158 (29%), Positives = 68/158 (43%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAG--ASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLI 66
KR KR+ + P G L + AS L++P L ++ E H C
Sbjct: 95 KRQERKRRSTANPAYSGLLETERKRLASNYLNNP-LFLTARANEDPCWKNEITHDEHCAA 153
Query: 67 CCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSFKKS 126
C G L C TCP YHL CL PPL+ P G W CP C + + L+K W +
Sbjct: 154 CKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQ-KALKKDEGVPWTGML--A 210
Query: 127 ILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRN 164
I+ S + + +E Q ++ E E Q + +R+
Sbjct: 211 IVHSYVTHKTVKEEEKQKLLQRGS-ELQNEHQQLEERD 247
>RGD|1308739 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1308739 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 OMA:SDKQALG IPI:IPI00566233
Ensembl:ENSRNOT00000046327 Uniprot:F1LTZ7
Length = 512
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/132 (31%), Positives = 58/132 (43%)
Query: 56 GEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
GE H C C G L C TC YHL CL PPL+ P G W CP C + L+K
Sbjct: 320 GEITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKCQR-KALKKDE 378
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTK 175
W +I+ S + + +E Q ++ E +E Q + +R D + S
Sbjct: 379 GVPWTGML--AIVHSYVTHKTVKEEEKQKLLQRGS-ELQSEHQQLEER----DRQLASAV 431
Query: 176 DVDDGQGIKTSI 187
V G +KTS+
Sbjct: 432 KVSTG--LKTSL 441
>UNIPROTKB|F1NX82 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:AADN02006727 IPI:IPI00584515
Ensembl:ENSGALT00000022994 Uniprot:F1NX82
Length = 447
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/224 (25%), Positives = 106/224 (47%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAG--ASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLI 66
KR KR+ + P G L + AS L++P L + ++ + E H C
Sbjct: 213 KRQERKRRSTANPAYSGLLETERKRLASNFLNNP-LFLSTRANEDPFWKNEIHHDEYCTA 271
Query: 67 CCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSFKKS 126
C G L C TCP YHL CL PPL+ P G W CP C + + L+K + W + +
Sbjct: 272 CKRGVNLQPCGTCPRAYHLNCLDPPLKTAPKGVWVCPKCQQ-KVLKKDDNVPWTGTL--A 328
Query: 127 ILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTS 186
I+ S + + +E + ++ E +E + + +++ +N K ++ +K+S
Sbjct: 329 IVHSYVTHKTVKEEEKRKLLKRSS-ELRSEHRQLEEKDRLLNN--AVKKCLE----LKSS 381
Query: 187 IKVHEPRICRGRHSNKEAM-TESKDVDSKKSIRVQDSSTATNAV 229
+ + +G S+ E + T + + +++ I+V ++T T+++
Sbjct: 382 LLAQQ----KGTQSSLERLRTLIRLIQNEQMIQVTMTTTTTSSL 421
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/158 (29%), Positives = 70/158 (44%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAG--ASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLI 66
KR KR+ + P G L + AS L++P L ++ E H C
Sbjct: 269 KRQERKRRSTANPAYSGLLETERKRLASNYLNTP-LFLTARANEDPCWKNEITHDELCAA 327
Query: 67 CCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSFKKS 126
C G L C TCP YHL CL PPL+ P G W CP C + + L+K W +
Sbjct: 328 CKRGTNLQPCGTCPRAYHLSCLDPPLKTAPKGVWVCPKCQQ-KALKKDGGVPWTGML--A 384
Query: 127 ILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRN 164
I+ S + + +E Q ++ E +E+Q + +R+
Sbjct: 385 IVHSYVTHKTVKEEEKQKLLQRGS-ELQSERQQLEERD 421
>UNIPROTKB|Q96EK2 [details] [associations]
symbol:PHF21B "PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG080293
HOGENOM:HOG000231466 EMBL:CR456448 EMBL:AK092243 EMBL:AK297317
EMBL:AL049760 EMBL:Z83838 EMBL:BC012187 IPI:IPI00738578
IPI:IPI00739761 IPI:IPI01009331 RefSeq:NP_001129334.1
RefSeq:NP_001229379.1 RefSeq:NP_612424.1 UniGene:Hs.254097
ProteinModelPortal:Q96EK2 SMR:Q96EK2 PhosphoSite:Q96EK2
DMDM:74731574 PRIDE:Q96EK2 DNASU:112885 Ensembl:ENST00000313237
Ensembl:ENST00000396103 Ensembl:ENST00000404079 GeneID:112885
KEGG:hsa:112885 UCSC:uc003bfn.3 UCSC:uc011aql.2 CTD:112885
GeneCards:GC22M045277 HGNC:HGNC:25161 neXtProt:NX_Q96EK2
PharmGKB:PA134872136 eggNOG:NOG291382 InParanoid:Q96EK2 OMA:SDKQALG
OrthoDB:EOG4P2Q2F PhylomeDB:Q96EK2 ChiTaRS:PHF21B GenomeRNAi:112885
NextBio:78697 ArrayExpress:Q96EK2 Bgee:Q96EK2 CleanEx:HS_PHF21B
Genevestigator:Q96EK2 GermOnline:ENSG00000056487 Uniprot:Q96EK2
Length = 531
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 47/158 (29%), Positives = 68/158 (43%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAG--ASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLI 66
KR KR+ + P G L + AS L++P L ++ E H C
Sbjct: 299 KRQERKRRSTANPAYSGLLETERKRLASNYLNNP-LFLTARANEDPCWKNEITHDEHCAA 357
Query: 67 CCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSFKKS 126
C G L C TCP YHL CL PPL+ P G W CP C + + L+K W +
Sbjct: 358 CKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQ-KALKKDEGVPWTGML--A 414
Query: 127 ILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRN 164
I+ S + + +E Q ++ E E Q + +R+
Sbjct: 415 IVHSYVTHKTVKEEEKQKLLQRGS-ELQNEHQQLEERD 451
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC---SELEDLEKPISHLWK 120
C IC +L CDTCP++YH C+ PPL ++P G W CP C + +EK +S WK
Sbjct: 331 CRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEKILSWRWK 390
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 50 KRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
+++ + E+ H C +C GEL+ CDTC YH+ C+ +E P G W CP C E
Sbjct: 254 RKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEE 311
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC---SELEDLEKPISHLWK 120
C IC +L CDTCP++YH C+ PPL ++P G W CP C + +EK +S WK
Sbjct: 331 CRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEKILSWRWK 390
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 50 KRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
+++ + E+ H C +C GEL+ CDTC YH+ C+ +E P G W CP C E
Sbjct: 254 RKEQGVVEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEE 311
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 133 (51.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 14 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNSNNKE--QDGRNDFYCW 67
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 68 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 108
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 158 (60.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 27 LNSYAGASL----SLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNT 82
+N+ A ASL + S ++ ++ ED + C +C NGGEL+CCD CP
Sbjct: 659 VNTSAKASLPDSTGVQSQSVQPGEQQSEKTPEADEDPNEDWCAVCQNGGELICCDKCPKV 718
Query: 83 YHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
+HL C P L P G W C C +L E
Sbjct: 719 FHLSCHVPSLTASPSGEWYCTLCRDLNSPE 748
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 26/49 (53%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP YHL C P L P G W C C L E
Sbjct: 999 CAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1047
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 158 (60.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 29/64 (45%), Positives = 36/64 (56%)
Query: 42 LKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWK 101
L D+ + +K TI E+ + C +C NGGELLCCD CP +HL C P L P G W
Sbjct: 767 LPDSNNCEKEVNTI-ENEDF--CAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWV 823
Query: 102 CPSC 105
C C
Sbjct: 824 CTLC 827
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 104 VRRKKREQKKELGHV 118
>RGD|1595847 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=ISO] [GO:0016235
"aggresome" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 RGD:1595847 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0010369 GeneTree:ENSGT00530000062982 IPI:IPI00366002
PRIDE:F1M6Z0 Ensembl:ENSRNOT00000019368 UCSC:RGD:1595847
NextBio:676966 ArrayExpress:F1M6Z0 Uniprot:F1M6Z0
Length = 1307
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 26/49 (53%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP YHL C P L P G W C C L E
Sbjct: 1064 CAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1112
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 158 (60.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C GG+LLCCD CP +HL C PPL P G W C C ++E E
Sbjct: 906 CAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLCRDVEQPE 954
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKESRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 104 VRRKKREQKKELGHV 118
>UNIPROTKB|F1MD96 [details] [associations]
symbol:F1MD96 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:DAAA02040745
EMBL:DAAA02040746 IPI:IPI01003121 Ensembl:ENSBTAT00000027831
Uniprot:F1MD96
Length = 1268
Score = 158 (60.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 26/49 (53%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP YHL C P L P G W C C L E
Sbjct: 1025 CAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRSLTQPE 1073
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 156 (60.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 104 VRRKKREQKKELGHV 118
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGGELLCC+ CP +HL C P L + P G W C C DL KP
Sbjct: 829 CAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFC---RDLSKP 876
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGGELLCC+ CP +HL C P L + P G W C C DL KP
Sbjct: 831 CAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC---RDLSKP 878
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGGELLCC+ CP +HL C P L + P G W C C DL KP
Sbjct: 832 CAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFC---RDLSKP 879
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 156 (60.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 104 VRRKKREQKKELGHV 118
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 155 (59.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKESRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 28/63 (44%), Positives = 35/63 (55%)
Query: 52 QYTIGEDGHYYE--CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109
Q T G++ E C +C NGGELLCCD CP +H+ C P L+ P G W C C L
Sbjct: 923 QTTAGKEDDPNEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFCRNLA 982
Query: 110 DLE 112
+ E
Sbjct: 983 NPE 985
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 104 VRRKKREQKKELGHV 118
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 104 VRRKKREQKKELGHV 118
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Query: 107 ---ELEDLEKPISHL 118
+ + +K + H+
Sbjct: 104 VRRKKREQKKELGHV 118
>UNIPROTKB|D4A9U0 [details] [associations]
symbol:Phf21b "PHD finger protein 21B (Predicted)"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 RGD:1308739 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:CH473950 CTD:112885
OrthoDB:EOG4P2Q2F GeneTree:ENSGT00530000063984 IPI:IPI00361455
RefSeq:NP_001124152.1 UniGene:Rn.198794 Ensembl:ENSRNOT00000017906
GeneID:300117 KEGG:rno:300117 NextBio:646365 Uniprot:D4A9U0
Length = 494
Score = 152 (58.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 35/109 (32%), Positives = 49/109 (44%)
Query: 56 GEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
GE H C C G L C TC YHL CL PPL+ P G W CP C + L+K
Sbjct: 302 GEITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKCQR-KALKKDE 360
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRN 164
W +I+ S + + +E Q ++ E +E Q + +R+
Sbjct: 361 GVPWTGML--AIVHSYVTHKTVKEEEKQKLLQRGS-ELQSEHQQLEERD 406
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 156 (60.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGGELLCC+ CP +HL C P L + P G W C C DL KP
Sbjct: 830 CAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFC---RDLSKP 877
>UNIPROTKB|F1P4C7 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0031647 "regulation
of protein stability" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016922 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AADN02006351 EMBL:AADN02006352
IPI:IPI00591737 Ensembl:ENSGALT00000020916 Uniprot:F1P4C7
Length = 928
Score = 155 (59.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 26/51 (50%), Positives = 29/51 (56%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGGELLCC+ CP +HL C P L P G W C C DL KP
Sbjct: 707 CAVCQNGGELLCCEKCPKVFHLSCHVPSLMSFPSGEWICTFC---RDLSKP 754
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 155 (59.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 44 EKESRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 156 (60.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 152 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA-QECSKP 206
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 156 (60.0 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 309 YVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA-QECSKP 363
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 154 (59.3 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 47 SLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
+L ++ I +D Y C C +GG+LLCCD C ++HL CL PPL ++P G W C SC+
Sbjct: 51 NLKNKRGVINDD---Y-CSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSCT 106
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 155 (59.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 43 KDNGSLDKRQY-TIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWK 101
KD +L Q T G+D + C IC +GG+L+CCD CP+TYH CL ++ +P G W
Sbjct: 606 KDATNLALHQVDTDGDDPNDDACGICGDGGDLICCDGCPSTYHQNCLG--MQVLPSGDWH 663
Query: 102 CPSCS 106
CP+C+
Sbjct: 664 CPNCT 668
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 156 (60.0 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 242 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA-QECSKP 296
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 156 (60.0 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 250 YVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA-QECSKP 304
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 156 (60.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 273 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLA-QECNKP 327
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 156 (60.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 284 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLA-QECNKP 338
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 156 (60.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 285 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLA-QECNKP 339
>MGI|MGI:2443812 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
MGI:MGI:2443812 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG080293 CTD:112885 eggNOG:NOG291382
OMA:SDKQALG EMBL:AK042863 IPI:IPI00227362 RefSeq:NP_001074635.2
UniGene:Mm.101022 ProteinModelPortal:Q8C966 SMR:Q8C966
STRING:Q8C966 PhosphoSite:Q8C966 PRIDE:Q8C966
Ensembl:ENSMUST00000159939 GeneID:271305 KEGG:mmu:271305
UCSC:uc007xco.2 GeneTree:ENSGT00530000063984 NextBio:393443
Bgee:Q8C966 CleanEx:MM_PHF21B Genevestigator:Q8C966
GermOnline:ENSMUSG00000016624 Uniprot:Q8C966
Length = 487
Score = 150 (57.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 35/109 (32%), Positives = 49/109 (44%)
Query: 56 GEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
GE H C C G L C TC YHL CL PPL+ P G W CP C + L+K
Sbjct: 302 GEITHDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTPPKGLWVCPKCQR-KALKKDE 360
Query: 116 SHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRN 164
W +I+ S + + +E Q ++ E +E Q + +R+
Sbjct: 361 GVPWTGML--AIVHSYVTHKTVKEEEKQKLLQRGS-ELQSEHQQLEERD 406
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 156 (60.0 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 310 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA-QECSKP 364
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 156 (60.0 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 312 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRCPKCLA-QECSKP 366
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 154 (59.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCS 106
+K G ++ C C GG+LLCCD CP +HLQC PPL + +PPG W C C+
Sbjct: 42 EKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 101
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 26/51 (50%), Positives = 29/51 (56%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGGELLCC+ CP +HL C P L P G W C C DL KP
Sbjct: 828 CAVCQNGGELLCCEKCPKVFHLTCHVPTLTHFPSGEWICTFC---RDLSKP 875
>UNIPROTKB|F1RGC2 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:FP102759 Ensembl:ENSSSCT00000015917 Uniprot:F1RGC2
Length = 1238
Score = 158 (60.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 26/49 (53%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP YHL C P L P G W C C L E
Sbjct: 995 CAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRSLTQPE 1043
Score = 40 (19.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 20/63 (31%), Positives = 25/63 (39%)
Query: 145 FFEKDDVECLAEKQTVSKRNTFGDNEECSTKD-VDDGQGIKTSIKVHE---PRICRGRHS 200
FFE E EK+ R D+EE S++ QG V E P+ R RH
Sbjct: 1161 FFEGWLKEIYPEKRFAQPRQEDSDSEEVSSESGYSTPQGFPWPHYVQEGIQPKR-RRRHM 1219
Query: 201 NKE 203
E
Sbjct: 1220 ENE 1222
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 159 (61.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C GG+ LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 278 YICLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA-QECGKP 332
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 273 TDKDTTDKLLILRDVMLESMKSHDKLLQASKSAPIQN 309
T KDT + L DV + + S +L+ S + Q+
Sbjct: 1100 TSKDTASAMATLSDVHQKELDSLS-MLRTSNESKFQS 1135
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVA-EECNKP 348
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVA-EECNKP 348
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 297 YVCLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA-EECNKP 351
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/75 (41%), Positives = 38/75 (50%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG+ + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 498 SLMHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 557
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 558 WICTFC---RDIGKP 569
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 157 (60.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y CL+C +G + LL CD C ++YH CL PPL DVP G W+CP C ++ KP
Sbjct: 310 YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLA-QECNKP 364
Score = 41 (19.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 24/99 (24%), Positives = 37/99 (37%)
Query: 133 VMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEP 192
V Q +S EK+D CL KR+ E K + +G+ + +
Sbjct: 1377 VQQADRSSPVRSSSEKND--CLR-----GKRDAINSPER-KLKRRPEREGLPSE-RWDRV 1427
Query: 193 RICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNAVHH 231
+ R K ++ KD+DS K R + NA H
Sbjct: 1428 KHMRTPQKKKIKLSHPKDMDSFKLERERSYDLVRNAETH 1466
>UNIPROTKB|F1LWS6 [details] [associations]
symbol:F1LWS6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00209838 Ensembl:ENSRNOT00000020980
ArrayExpress:F1LWS6 Uniprot:F1LWS6
Length = 822
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 284 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 325
>UNIPROTKB|E2R0A1 [details] [associations]
symbol:SP110 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00510000046835
OMA:DGTSEMN EMBL:AAEX03014424 Ensembl:ENSCAFT00000016996
Uniprot:E2R0A1
Length = 682
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 60 HYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISH 117
++ EC +CC GG LLCCDTCP +H C PP E W C C +E L + H
Sbjct: 528 NFKECEVCCRGGPLLCCDTCPRAFHEDCHIPPAE-AERSPWSCTFC-RIESLRRQRCH 583
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 31/75 (41%), Positives = 37/75 (49%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 347 SLMHRSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 406
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 407 WICTFC---RDIGKP 418
>UNIPROTKB|F1PT90 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:AAEX03012891
Ensembl:ENSCAFT00000011106 Uniprot:F1PT90
Length = 1374
Score = 153 (58.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 25/49 (51%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP +HL C P L P G W C C L E
Sbjct: 1131 CAVCLNGGELLCCDRCPKVFHLSCHLPALLGFPGGDWVCTLCRSLTQPE 1179
Score = 44 (20.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 21/63 (33%), Positives = 25/63 (39%)
Query: 145 FFEKDDVECLAEKQTVSKRNTFGDNEECSTKD-VDDGQGIKTSIKVHE---PRICRGRHS 200
FFE E EKQ R D+EE S++ QG V E P+ R RH
Sbjct: 1297 FFEGWLKEIYPEKQFAQPRQEDSDSEEVSSESGYSTPQGFPWPPYVQEGIQPKR-RRRHM 1355
Query: 201 NKE 203
E
Sbjct: 1356 ENE 1358
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 152 (58.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVA-EECNKP 348
Score = 47 (21.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 107 ELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKD---DVECLAEKQTVSKR 163
EL+ ++KP K + KS +KL ++ +E + EK VE LA++ T KR
Sbjct: 1526 ELKKIDKPKKKKLKLNVDKSKELNKLAKKLAKEEERKKKKEKAAAAKVE-LAKESTEKKR 1584
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 152 (58.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA-EECNKP 348
Score = 47 (21.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 107 ELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKD---DVECLAEKQTVSKR 163
EL+ ++KP K S +KS +KL ++ +E + EK VE L ++ T KR
Sbjct: 1529 ELKKMDKPKKKKLKLSAEKSKELNKLAKKLAKEEERKKKKEKAAAAKVE-LVKESTEKKR 1587
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 31/75 (41%), Positives = 38/75 (50%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG+ + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 627 SLMHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 686
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 687 WICTFC---RDIGKP 698
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 25/51 (49%), Positives = 29/51 (56%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
C +C NGG+LLCC+ CP +HL C P L P G W C C DL KP
Sbjct: 727 CAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC---RDLSKP 774
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
Y CL+C G + LL CD C ++YH CL PPL DVP G W+CP C
Sbjct: 315 YVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKC 361
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 35 LSLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGE---LLCCDTCPNTYHLQCLTPP 91
LSL+ P K L ++ ++ + Y C +C G E LL CD C + YH+ CL PP
Sbjct: 245 LSLE-PCTKTTMQL-RKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPP 302
Query: 92 LEDVPPGSWKCPSCSELEDLEKP 114
L ++P G W+CP C L + ++P
Sbjct: 303 LPEIPRGIWRCPKCI-LAECKQP 324
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 31/75 (41%), Positives = 38/75 (50%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG+ + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 866 SLMHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 925
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 926 WICTFC---RDIGKP 937
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 151 (58.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C IC G E LL CD C +TYH+ CL PPL ++P G W+CP C + + ++P
Sbjct: 318 YVCRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRGVWRCPKCI-MAECKRP 372
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 155 (59.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 25/49 (51%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP +HL C P L P G W C C L E
Sbjct: 973 CAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1021
Score = 38 (18.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 145 FFEKDDVECLAEKQTVSKRNTFGDNEECSTK 175
FFE E EK+ R D+EE S++
Sbjct: 1139 FFEGWLKEIYPEKRFAQPRQEDSDSEEVSSE 1169
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/75 (41%), Positives = 37/75 (49%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 684 SLMHRSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 743
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 744 WICTFC---RDIGKP 755
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/75 (41%), Positives = 37/75 (49%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 687 SLMHRSARIGGDGSNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 746
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 747 WICTFC---RDIGKP 758
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 155 (59.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 25/49 (51%), Positives = 27/49 (55%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112
C +C NGGELLCCD CP +HL C P L P G W C C L E
Sbjct: 1002 CAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1050
Score = 38 (18.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 145 FFEKDDVECLAEKQTVSKRNTFGDNEECSTK 175
FFE E EK+ R D+EE S++
Sbjct: 1168 FFEGWLKEIYPEKRFAQPRQEDSDSEEVSSE 1198
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 148 (57.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 31/75 (41%), Positives = 37/75 (49%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 734 SLVHRSSRIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 793
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 794 WICTFC---RDIGKP 805
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 152 (58.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA-EECNKP 348
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 107 ELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEK 148
EL+ ++KP K S +KS +KL ++ +E + EK
Sbjct: 1524 ELKKMDKPKKKKLKLSAEKSKELNKLAKKLAKEEERKKKKEK 1565
>ASPGD|ASPL0000065953 [details] [associations]
symbol:AN7300 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACD01000127 eggNOG:NOG145066
OrthoDB:EOG4N6053 RefSeq:XP_680569.1 ProteinModelPortal:Q5AWN0
EnsemblFungi:CADANIAT00000138 GeneID:2870174 KEGG:ani:AN7300.2
HOGENOM:HOG000168186 OMA:PPEGDWF Uniprot:Q5AWN0
Length = 841
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 35/101 (34%), Positives = 48/101 (47%)
Query: 34 SLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLE 93
S S+ S D DN L + + + C C G LLCCD C +YH CL PPL+
Sbjct: 424 SESVASSDAGDNRRLTPSLTDEPAENNDF-CRQCEKSGRLLCCDGCVYSYHFSCLNPPLD 482
Query: 94 DV-PP-GSWKCPSCSELEDLEKPISHLWKSSFKKSILASKL 132
PP G W CP CS + L + + K+ + L +K+
Sbjct: 483 PANPPEGDWFCPKCSVSKSLNTLLGGMEKTPGRDFALPNKI 523
>UNIPROTKB|E1C5C7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00594126 Ensembl:ENSGALT00000005744
ArrayExpress:E1C5C7 Uniprot:E1C5C7
Length = 2789
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 37/136 (27%), Positives = 66/136 (48%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC--SELEDLEKPISHLWKS 121
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C ++ + ++ + K+
Sbjct: 253 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKN 312
Query: 122 SFKKSILASKLVMQVRHKES----SQSFFEKDDVECLAEKQT--VSKRNTFGDNEECSTK 175
K + + + RH+ ++ ++D E +K+ S + + EC K
Sbjct: 313 ---KPYIRHEPIGYDRHRRKYWFLNRRIIIEEDSESEKDKKVWYYSTKIQLAELIECLDK 369
Query: 176 DVDDGQGIKTSIKVHE 191
D + KT ++ E
Sbjct: 370 DYWEADLCKTLEEMRE 385
>UNIPROTKB|E1C5C8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 OMA:DVIMEDF GO:GO:0008094
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00601232 Ensembl:ENSGALT00000005741
ArrayExpress:E1C5C8 Uniprot:E1C5C8
Length = 2802
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 37/136 (27%), Positives = 66/136 (48%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC--SELEDLEKPISHLWKS 121
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C ++ + ++ + K+
Sbjct: 253 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKN 312
Query: 122 SFKKSILASKLVMQVRHKES----SQSFFEKDDVECLAEKQT--VSKRNTFGDNEECSTK 175
K + + + RH+ ++ ++D E +K+ S + + EC K
Sbjct: 313 ---KPYIRHEPIGYDRHRRKYWFLNRRIIIEEDSESEKDKKVWYYSTKIQLAELIECLDK 369
Query: 176 DVDDGQGIKTSIKVHE 191
D + KT ++ E
Sbjct: 370 DYWEADLCKTLEEMRE 385
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/75 (41%), Positives = 37/75 (49%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
SL R IG DG + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 865 SLMHRSARIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 924
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 925 WICTFC---RDIGKP 936
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 148 (57.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 25 GALNSYAGASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYH 84
G+ +A L S + K + + + +D + C +C +GGEL+CCD CP+T+H
Sbjct: 690 GSGKPFASCQLEAWSAEYKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFH 749
Query: 85 LQCLTPPLEDVPPGSWKCPSCS 106
CL+ ++ +P GSW C SC+
Sbjct: 750 QACLS--MQVLPEGSWYCSSCT 769
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 152 (58.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVA-EECNKP 348
Score = 43 (20.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 107 ELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKD---DVECLAEKQTVSKR 163
EL+ ++KP K + KS +KL ++ +E + EK VE L ++ T KR
Sbjct: 1526 ELKKIDKPKKKKLKLNVDKSKELNKLAKKLAKEEERKKKKEKAAAAKVE-LVKESTEKKR 1584
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 147 (56.8 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 30/75 (40%), Positives = 38/75 (50%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
+L R IG DG+ + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 883 NLMHRSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 942
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 943 WICTFC---RDIGKP 954
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 147 (56.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 30/75 (40%), Positives = 38/75 (50%)
Query: 47 SLDKRQYTIGEDGHYYE-------CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGS 99
+L R IG DG+ + C +C NGG+LLCC+ CP +HL C P L P G
Sbjct: 881 NLMHRSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGD 940
Query: 100 WKCPSCSELEDLEKP 114
W C C D+ KP
Sbjct: 941 WICTFC---RDIGKP 952
>FB|FBgn0000541 [details] [associations]
symbol:E(bx) "Enhancer of bithorax" species:7227 "Drosophila
melanogaster" [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016589 "NURF complex" evidence=NAS;IDA;TAS]
[GO:0006334 "nucleosome assembly" evidence=NAS] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0035073
"pupariation" evidence=IMP] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IPI] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IGI;IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 SMART:SM00384 GO:GO:0007095 EMBL:AE014296
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045747 GO:GO:0006351 GO:GO:0048813 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0030097
GO:GO:0046331 GO:GO:0035073 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0035076 GO:GO:0042766 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 KO:K11728 OMA:DVIMEDF
GeneTree:ENSGT00660000095339 EMBL:AF417921 EMBL:AY051776
EMBL:BT023142 EMBL:BT022131 RefSeq:NP_001163304.1
RefSeq:NP_728505.1 RefSeq:NP_728507.1 RefSeq:NP_995946.1
UniGene:Dm.1449 HSSP:Q80TJ7 ProteinModelPortal:Q9W0T1 SMR:Q9W0T1
IntAct:Q9W0T1 MINT:MINT-1583525 STRING:Q9W0T1 PaxDb:Q9W0T1
EnsemblMetazoa:FBtr0072521 EnsemblMetazoa:FBtr0301348
EnsemblMetazoa:FBtr0332104 GeneID:44811 KEGG:dme:Dmel_CG32346
CTD:44811 FlyBase:FBgn0000541 InParanoid:Q9W0T1 OrthoDB:EOG466T1P
PhylomeDB:Q9W0T1 ChiTaRS:E(bx) GenomeRNAi:44811 NextBio:837653
Bgee:Q9W0T1 GermOnline:CG32346 Uniprot:Q9W0T1
Length = 2669
Score = 158 (60.7 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 60 HYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
HY + C +C G+LLCC+TCP YHL+C+ PP+ DVP W+C C
Sbjct: 337 HYDDHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLC 383
Score = 39 (18.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 190 HEPRICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNAV 229
+E C N+EA+T S+ D + +++ S NA+
Sbjct: 2284 NEWETCSRGSVNEEALTPSRQTDDTEW-KIRTSLRRPNAM 2322
Score = 39 (18.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 111 LEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNE 170
++K IS+ K L KLV + +E++ S E +T S+ + NE
Sbjct: 2249 IQKSISNALKQGNLSPELEEKLVCMQKQQENANS---------TNEWETCSRGSV---NE 2296
Query: 171 ECST--KDVDDGQG-IKTSIK 188
E T + DD + I+TS++
Sbjct: 2297 EALTPSRQTDDTEWKIRTSLR 2317
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 145 (56.1 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 35 LSLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGE---LLCCDTCPNTYHLQCLTPP 91
LSL+ P K L ++ ++ + Y C +C G E LL CD C + YH+ CL PP
Sbjct: 290 LSLE-PCTKTTMQL-RKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPP 347
Query: 92 LEDVPPGSWKCPSCSELEDLEKP 114
L ++P G W+CP C L + ++P
Sbjct: 348 LPEIPRGIWRCPKCI-LAECKQP 369
>UNIPROTKB|F5GXF5 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00911006 Ensembl:ENST00000544778
UCSC:uc010wqm.1 ArrayExpress:F5GXF5 Uniprot:F5GXF5
Length = 2457
Score = 150 (57.9 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 393 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
Score = 47 (21.6 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 21/110 (19%), Positives = 37/110 (33%)
Query: 202 KEAMTESKDVD-SKKSIRVQDSSTATNA---VHHEPXXXXXXXXXXXXXXIGNPVNEQGA 257
K+ + S V +K + + SST T+ +P G N Q
Sbjct: 2056 KQGQSNSGVVQVQQKVLGIIPSSTGTSQQTFTSFQPRTATVTIRPNTSGSGGTTSNSQVI 2115
Query: 258 AGKQLAENAEISMPHTDKDTTDKLLILRDVMLESMKSHDKLLQASKSAPI 307
G Q+ + + T K +I VM++ + Q + P+
Sbjct: 2116 TGPQIRPGMTVIRTPLQQSTLGKAIIRTPVMVQPGAPQQVMTQIIRGQPV 2165
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 152 (58.6 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA-EECSKP 348
Score = 41 (19.5 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 107 ELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKD---DVECLAEKQTVSKR 163
EL+ ++KP K KS +KL ++ +E + EK VE L ++ T KR
Sbjct: 1526 ELKKMDKPRKKKLKLGADKSKELNKLAKKLAKEEERKKKKEKAAAAKVE-LVKESTEKKR 1584
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 152 (58.6 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C+ C G +LL CD C ++YH CL PPL DVP G W+CP C E+ KP
Sbjct: 294 YVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA-EECSKP 348
Score = 41 (19.5 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 107 ELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKD---DVECLAEKQTVSKR 163
EL+ ++KP K KS +KL ++ +E + EK VE L ++ T KR
Sbjct: 1526 ELKKMDKPRKKKLKLGADKSKELNKLAKKLAKEEERKKKKEKAAAAKVE-LVKESTEKKR 1584
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 143 (55.4 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 49 DKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLE--DVPPGSWKCPSC 105
DK TI + + C C G LCCDTCP ++H CL PP++ ++P G W C C
Sbjct: 249 DKNNSTIDFENEDF-CSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 150 (57.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 254 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 295
Score = 47 (21.6 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 21/110 (19%), Positives = 37/110 (33%)
Query: 202 KEAMTESKDVD-SKKSIRVQDSSTATNA---VHHEPXXXXXXXXXXXXXXIGNPVNEQGA 257
K+ + S V +K + + SST T+ +P G N Q
Sbjct: 1980 KQGQSNSGVVQVQQKVLGIIPSSTGTSQQTFTSFQPRTATVTIRPNTSGSGGTTSNSQVI 2039
Query: 258 AGKQLAENAEISMPHTDKDTTDKLLILRDVMLESMKSHDKLLQASKSAPI 307
G Q+ + + T K +I VM++ + Q + P+
Sbjct: 2040 TGPQIRPGMTVIRTPLQQSTLGKAIIRTPVMVQPGAPQQVMTQIIRGQPV 2089
>FB|FBgn0023097 [details] [associations]
symbol:bon "bonus" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007422 "peripheral
nervous system development" evidence=TAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0048666
"neuron development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0005634 GO:GO:0007411
GO:GO:0046872 GO:GO:0008270 GO:GO:0007422 GO:GO:0003682
GO:GO:0048813 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006325 Gene3D:1.20.920.10 SUPFAM:SSF47370
HSSP:Q9UIG0 FlyBase:FBgn0023097 EMBL:AF210315
ProteinModelPortal:Q9U3Y7 SMR:Q9U3Y7 STRING:Q9U3Y7 PRIDE:Q9U3Y7
InParanoid:Q9U3Y7 OrthoDB:EOG48KPS6 ArrayExpress:Q9U3Y7 Bgee:Q9U3Y7
Uniprot:Q9U3Y7
Length = 1133
Score = 145 (56.1 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 39 SPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPG 98
S DL + ++ + +D + C +C +GGEL+CCD CP +H C P + +P
Sbjct: 876 STDLSNTQEVNNKNEQ-KDDPNEDWCAVCLDGGELMCCDKCPKVFHQNCHIPAISSLPDE 934
Query: 99 S--WKCPSCSELEDLEKPISHLWKSSFKKSILASKLVMQV 136
S W+C C +++L K SS + S L +++ ++
Sbjct: 935 SESWQCLLCVNIKELTKTEGSEKSSSGELSALELRILQRI 974
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 62 YECLICCNGGEL---LCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C IC G E+ L CD C + YH+ CL PPL +VP G W+CP C L + + P
Sbjct: 324 YVCRICSRGDEVDKFLLCDGCSDNYHIFCLLPPLSEVPKGVWRCPKCI-LAECKSP 378
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 150 (57.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 393 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/110 (19%), Positives = 37/110 (33%)
Query: 202 KEAMTESKDVD-SKKSIRVQDSSTATNA---VHHEPXXXXXXXXXXXXXXIGNPVNEQGA 257
K+ + S V +K + + SST T+ +P G N Q
Sbjct: 2119 KQGQSNSGVVQVQQKVLGIIPSSTGTSQQTFTSFQPRTATVTIRPNTSGSGGTTSNSQVI 2178
Query: 258 AGKQLAENAEISMPHTDKDTTDKLLILRDVMLESMKSHDKLLQASKSAPI 307
G Q+ + + T K +I VM++ + Q + P+
Sbjct: 2179 TGPQIRPGMTVIRTPLQQSTLGKAIIRTPVMVQPGAPQQVMTQIIRGQPV 2228
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 260 KQLAENAEISMPHTDKDTTDKLLILRDVMLESMKSHDKLLQASKSAPIQ---NRTMV 313
K+ + EI HT + + +I + V+++ + L Q P + N+ M+
Sbjct: 2639 KKKQQQIEIKREHTLQASNQSEIIQKQVVMKHNAVIEHLKQKKSMTPAEREENQRMI 2695
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 35 LSLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGE---LLCCDTCPNTYHLQCLTPP 91
LSL+ P K L ++ ++ + Y C +C G E LL CD C + YH+ CL PP
Sbjct: 249 LSLE-PCTKTTMQL-RKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPP 306
Query: 92 LEDVPPGSWKCPSCSELEDLEKP 114
L ++P G W+CP C L + ++P
Sbjct: 307 LPEIPRGIWRCPKCI-LAECKQP 328
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 284 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 343
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 344 FEQATREYTLQS 355
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 284 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 343
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 344 FEQATREYTLQS 355
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 284 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 343
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 344 FEQATREYTLQS 355
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 325 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 384
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 385 FEQATREYTLQS 396
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 35 LSLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGGE---LLCCDTCPNTYHLQCLTPP 91
LSL+ P K L ++ ++ + Y C +C G E LL CD C + YH+ CL PP
Sbjct: 290 LSLE-PCTKTTMQL-RKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPP 347
Query: 92 LEDVPPGSWKCPSCSELEDLEKP 114
L ++P G W+CP C L + ++P
Sbjct: 348 LPEIPRGIWRCPKCI-LAECKQP 369
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 325 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 384
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 385 FEQATREYTLQS 396
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 325 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 384
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 385 FEQATREYTLQS 396
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 324 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 383
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 384 FEQATREYTLQS 395
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 325 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 384
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 385 FEQATREYTLQS 396
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 325 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 384
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 385 FEQATREYTLQS 396
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/52 (50%), Positives = 30/52 (57%)
Query: 57 EDGHYYECLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
ED Y CL+C + E L CD C N YH++CL PPLE VP SW C C
Sbjct: 174 ED-EYDSCLVCGQHDHPSETLLCDNCDNPYHMKCLNPPLESVPATSWYCDKC 224
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 148 (57.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 28/66 (42%), Positives = 35/66 (53%)
Query: 43 KDNGSLDKRQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPL--EDVPPGSW 100
K N D+ G ++ C C GG+LLCCD CP +HLQC PPL E +P G W
Sbjct: 38 KKNRKPDRSTRRSGRATNHDICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDW 97
Query: 101 KCPSCS 106
C C+
Sbjct: 98 MCHRCT 103
Score = 37 (18.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 188 KVHEPRICRGRHSNK-EAMTESKDVDSKKS 216
KV + +C G H+ K + +T + ++S
Sbjct: 598 KVSDSTVCTGAHAVKPQKVTSDAGSNGQRS 627
>UNIPROTKB|J9P5P6 [details] [associations]
symbol:MLL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03010288 EMBL:AAEX03010289 Ensembl:ENSCAFT00000046455
Uniprot:J9P5P6
Length = 4265
Score = 131 (51.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C C + G LL CD C +YH CL PPL+ VP G WKC C
Sbjct: 375 ECTVCEACGKASDPGRLLLCDDCDISYHTYCLAPPLQTVPKGGWKCKWC 423
Score = 69 (29.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 103 PSCSELED--LEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTV 160
P E ED + P H S +KKS+ S++ +V S K + +C +EK
Sbjct: 2160 PKKKEQEDKTMVPPDKH---SPWKKSVGTSEIKTEVLSPNS------KGETKCESEKSEE 2210
Query: 161 SKRNTFGDNEECSTK-DVDDGQGIKTSIKVHEPRICRGRHSNKEAMTESKDVDSKKSIRV 219
SK N + S D++DG+ K S++ + + R + + A++ + V +
Sbjct: 2211 SKDNVDTPCSQASAHTDINDGE--KASLQSCDTDLLEKRTNRETAVSSTSGVLGSTQLPA 2268
Query: 220 QD 221
+D
Sbjct: 2269 ED 2270
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 14 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNSNNKE--QDGRNDFYCW 67
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPI 115
+C G++LCC+ CP YH +CL L P G W CP C E + +KP+
Sbjct: 68 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC-ETDAFQKPV 114
>UNIPROTKB|H0YEI1 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 Ensembl:ENST00000531989
Bgee:H0YEI1 Uniprot:H0YEI1
Length = 116
Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 72 ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 66 QLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 102
>UNIPROTKB|F1P7W6 [details] [associations]
symbol:MLL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001594
InterPro:IPR001965 InterPro:IPR002219 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0035556 GO:GO:0046872
GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
OMA:VDPYERP EMBL:AAEX03010288 EMBL:AAEX03010289
Ensembl:ENSCAFT00000007959 Uniprot:F1P7W6
Length = 4837
Score = 131 (51.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C C + G LL CD C +YH CL PPL+ VP G WKC C
Sbjct: 934 ECTVCEACGKASDPGRLLLCDDCDISYHTYCLAPPLQTVPKGGWKCKWC 982
Score = 69 (29.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 103 PSCSELED--LEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTV 160
P E ED + P H S +KKS+ S++ +V S K + +C +EK
Sbjct: 2722 PKKKEQEDKTMVPPDKH---SPWKKSVGTSEIKTEVLSPNS------KGETKCESEKSEE 2772
Query: 161 SKRNTFGDNEECSTK-DVDDGQGIKTSIKVHEPRICRGRHSNKEAMTESKDVDSKKSIRV 219
SK N + S D++DG+ K S++ + + R + + A++ + V +
Sbjct: 2773 SKDNVDTPCSQASAHTDINDGE--KASLQSCDTDLLEKRTNRETAVSSTSGVLGSTQLPA 2830
Query: 220 QD 221
+D
Sbjct: 2831 ED 2832
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 150 (57.9 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 195 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 236
Score = 44 (20.5 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 250 NPVNEQGAAGKQLAENAEISMPHTDKDTTDKLLILRDVMLE--SMKSHDKLLQASKS 304
N +E G ++++ + + TD D T L +D MLE S++S D Q S
Sbjct: 1060 NNKSEDSTRGCSQSDSSILGI--TDPDHTANKLYSKDQMLEDVSIQSADTHCQKQNS 1114
Score = 42 (19.8 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 149 DDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTES 208
D+ + ++ K T D+E+ KD D +G S E I + + + E
Sbjct: 877 DESDRRKSPRSPKKIKTEPDSEKGEVKDSDAAKGADQS----EMDISKVTEKKDQDVKEV 932
Query: 209 KDVDSKKSIR 218
D D+ KS +
Sbjct: 933 LDSDNDKSFK 942
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 36/153 (23%), Positives = 70/153 (45%)
Query: 156 EKQTVSKRNTFGDNEECSTKDVDDGQGIKTSI--KVHEPRI--CRGRHSNKEAMTESKDV 211
+++ VS + T ++ +K V+D G K S K+ + + C ++S K ++T+ K+
Sbjct: 1263 KREFVSDKTTGSCDDRLQSK-VNDANGRKPSQDQKLEDRPLNKCIDQNSLK-SVTDKKNN 1320
Query: 212 DSKKSIRV-QDSST-ATNAVHHEPXXXXXXX--XXXXXXXIGNPVNEQGA--AGKQLAEN 265
++++S + Q +ST N ++ IG+ E K + EN
Sbjct: 1321 ENRESEKKGQKASTFQINGKDNKAKVYLKGECLRDISESKIGSGDIEPKVNNINKIIPEN 1380
Query: 266 AEISMPHTDKDTTDKLLILRDVMLESMKSHDKL 298
+I P T K++T K + DV++E + L
Sbjct: 1381 -DIK-PLTVKESTVKPFMNGDVIMEDFNEKNNL 1411
Score = 40 (19.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 26/109 (23%), Positives = 45/109 (41%)
Query: 117 HLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKD 176
HL ++S+KK I +SKL + + + EK E + + + G S K
Sbjct: 976 HL-RTSYKKKIKSSKLDGLLERRIKQFTLEEKQRHEKMKLEGGIKGS---GKTPTSSVKS 1031
Query: 177 VDDGQGIKTSIK--VHEPRICRGRHSNKEAMTESKDVDSKKSIRVQDSS 223
+ + I T +K + + + SN + +K DS + DSS
Sbjct: 1032 LSESPVI-TKVKEGCQSDLLTQEQSSNT---SNNKSEDSTRGCSQSDSS 1076
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 130 (50.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C C + G LL CD C +YH CL PPL+ VP G WKC C
Sbjct: 162 ECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 210
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPL--EDVPPGSWKCPSCS 106
C C G +CC+ CP ++HL CL PPL E++P GSW C +CS
Sbjct: 120 CSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCS 164
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 141 (54.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
+ C +C G E L+ CD C + YH CL PPL D P G+W+CP C E+ +KP
Sbjct: 359 FVCRMCGRGDEDEKLMLCDGCDDNYHTFCLIPPLTDPPKGNWRCPKCVA-EECKKP 413
>ZFIN|ZDB-GENE-091118-99 [details] [associations]
symbol:si:ch211-244o18.1 "si:ch211-244o18.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-091118-99 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00690000101661 EMBL:BX294167 IPI:IPI00993170
Ensembl:ENSDART00000133525 Uniprot:F1R5P1
Length = 589
Score = 136 (52.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 25/49 (51%), Positives = 30/49 (61%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C C + G LL CD C +YH CL PPL++VP GSWKC C
Sbjct: 15 ECTVCEACGQASDPGRLLLCDDCDISYHTYCLDPPLQNVPKGSWKCKWC 63
>UNIPROTKB|F1LX76 [details] [associations]
symbol:F1LX76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00361297 Ensembl:ENSRNOT00000020904 ArrayExpress:F1LX76
Uniprot:F1LX76
Length = 2894
Score = 150 (57.9 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
Score = 44 (20.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 17/81 (20%), Positives = 28/81 (34%)
Query: 148 KDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTE 207
KD+ + ++ K T D+E+ +D D G + H KE +
Sbjct: 925 KDESDKRKSPRSPKKMKTECDSEKGEARDADSTAGATAGTMELSKLPEKEEHDVKELLDP 984
Query: 208 SKDVDSKKSIRVQDSSTATNA 228
D K+ D S T +
Sbjct: 985 DNDKPFKEEPMEIDDSVKTES 1005
Score = 39 (18.8 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 250 NPVNEQGAAGKQLAENAEISMP-HTDKDTTDKLLILRDVMLESMKSHDKLLQASKS 304
N E + + +++E M DTT K I D +ES + K SKS
Sbjct: 1266 NSTLENNSGTMYMRDSSEEDMVVQNSNDTTSKRFITPDQGMESTEP-TKCQLVSKS 1320
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 150 (57.9 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
Score = 44 (20.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 17/81 (20%), Positives = 28/81 (34%)
Query: 148 KDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTE 207
KD+ + ++ K T D+E+ +D D G + H KE +
Sbjct: 983 KDESDKRKSPRSPKKMKTECDSEKGEARDADSTAGATAGTMELSKLPEKEEHDVKELLDP 1042
Query: 208 SKDVDSKKSIRVQDSSTATNA 228
D K+ D S T +
Sbjct: 1043 DNDKPFKEEPMEIDDSVKTES 1063
Score = 39 (18.8 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 250 NPVNEQGAAGKQLAENAEISMP-HTDKDTTDKLLILRDVMLESMKSHDKLLQASKS 304
N E + + +++E M DTT K I D +ES + K SKS
Sbjct: 1324 NSTLENNSGTMYMRDSSEEDMVVQNSNDTTSKRFITPDQGMESTEP-TKCQLVSKS 1378
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 145 (56.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
Y C +C G E LL CD C + YH+ CL PPL ++P G W+CP C E P +
Sbjct: 325 YVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFG 384
Query: 119 WKSSFKKSILAS 130
++ + ++ L S
Sbjct: 385 FEQATREYTLQS 396
Score = 40 (19.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 157 KQTVSKRNTFGD---NEECSTKDVDDGQGIKTSIKVHEPRIC 195
+ T+++ F D N C+ + D +GI ++ ++ C
Sbjct: 847 QMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAC 888
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 150 (57.9 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 371 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 412
Score = 44 (20.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 17/81 (20%), Positives = 28/81 (34%)
Query: 148 KDDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTE 207
KD+ + ++ K T D+E+ +D D G + H KE +
Sbjct: 1044 KDESDKRKSPRSPKKMKTECDSEKGEARDADSTAGATAGTMELSKLPEKEEHDVKELLDP 1103
Query: 208 SKDVDSKKSIRVQDSSTATNA 228
D K+ D S T +
Sbjct: 1104 DNDKPFKEEPMEIDDSVKTES 1124
Score = 39 (18.8 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 250 NPVNEQGAAGKQLAENAEISMP-HTDKDTTDKLLILRDVMLESMKSHDKLLQASKS 304
N E + + +++E M DTT K I D +ES + K SKS
Sbjct: 1385 NSTLENNSGTMYMRDSSEEDMVVQNSNDTTSKRFITPDQGMESTEP-TKCQLVSKS 1439
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 33/103 (32%), Positives = 55/103 (53%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSF 123
C IC +GG+L+CCD CP+T+H CL ++ P G+W C +CS + EK + ++S
Sbjct: 653 CGICGDGGDLICCDGCPSTFHQSCLD--IKKFPSGAWYCYNCS-CKFCEKDEAAKHETST 709
Query: 124 KKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTV-SKRNT 165
S+ + +L + K + D C+ + TV +R+T
Sbjct: 710 LPSLSSCRLCEEKCSKHYPHTL--ADHQACINQDGTVPGERST 750
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 33/103 (32%), Positives = 55/103 (53%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSF 123
C IC +GG+L+CCD CP+T+H CL ++ P G+W C +CS + EK + ++S
Sbjct: 653 CGICGDGGDLICCDGCPSTFHQSCLD--IKKFPSGAWYCYNCS-CKFCEKDEAAKHETST 709
Query: 124 KKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTV-SKRNT 165
S+ + +L + K + D C+ + TV +R+T
Sbjct: 710 LPSLSSCRLCEEKCSKHYPHTL--ADHQACINQDGTVPGERST 750
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 137 (53.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 51 RQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
R+Y+ ++ C+IC +GG LL CD+CP +H++C++ P +P G+W C C
Sbjct: 607 RKYSANDNNDL--CVICADGGNLLLCDSCPRAFHIECVSLP--SIPRGNWHCKYC 657
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 137 (53.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 33/103 (32%), Positives = 46/103 (44%)
Query: 9 KRIVMKRKRKSLPW---GEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECL 65
+R KRK S P G +S P L ++ S D+ G + Y C
Sbjct: 14 ERTAQKRKVPSPPHSSNGHSPQDSSTSPIKKKKKPGLLNSSSKDQD----GRNDFY--CW 67
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 68 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 108
>POMBASE|SPAC2F7.07c [details] [associations]
symbol:cph2 "Clr6 histone deacetylase associated PHD
protein-2 Cph2" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0032221 "Rpd3S complex"
evidence=IDA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 PomBase:SPAC2F7.07c EMBL:CU329670
GO:GO:0005819 GO:GO:0046872 GO:GO:0008270 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 eggNOG:NOG145066 OrthoDB:EOG4TQQJV
PIR:T38555 RefSeq:NP_592978.1 ProteinModelPortal:Q09698
DIP:DIP-29347N STRING:Q09698 EnsemblFungi:SPAC2F7.07c.1
GeneID:2541422 KEGG:spo:SPAC2F7.07c NextBio:20802526 Uniprot:Q09698
Length = 607
Score = 134 (52.2 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 41 DLKDNGSLDK-RQYTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED--VPP 97
D+ N L +Y + Y C C G LCC+TCPN++H C+ PP+E+ +P
Sbjct: 244 DISSNELLPTPEEYPYRYNNDY--CSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPD 301
Query: 98 GSWKCPSC 105
+W C C
Sbjct: 302 DAWYCNEC 309
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 110 (43.8 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 76 CDTCPNTYHLQCLTPPLEDVPPGS-WKCPSC-SELEDLEKPISHLWKSSFKKSILAS 130
CD C YH+ CL PPL+ VP W CPSC ++ ++ K L K S KK+ + S
Sbjct: 5 CDECNMAYHIYCLNPPLDKVPEEEYWYCPSCKTDSSEVVKAGERL-KMSKKKAKMPS 60
>UNIPROTKB|F6XUE7 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:MCFSEEV
GeneTree:ENSGT00510000046835 Ensembl:ENSCAFT00000017034
EMBL:AAEX03014424 Uniprot:F6XUE7
Length = 551
Score = 133 (51.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 30/95 (31%), Positives = 44/95 (46%)
Query: 59 GHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
G+ EC C +GGEL CCDTC ++H C PP+E W C C +E L + H
Sbjct: 373 GNSDECETCRDGGELFCCDTCSRSFHEDCHIPPVE-TERSPWSCTFC-RIESLGRQQCHR 430
Query: 119 WKSSFKKSI-----LASKLVMQVRHKESSQSFFEK 148
++ + L + ++ + S SFF K
Sbjct: 431 ESEVLERQMQPEEQLKCEFILLRVYCHSESSFFSK 465
>UNIPROTKB|Q9HB58 [details] [associations]
symbol:SP110 "Sp110 nuclear body protein" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249 SMART:SM00258
SMART:SM00297 GO:GO:0019048 GO:GO:0005730 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 EMBL:CH471063 GO:GO:0008270
GO:GO:0006351 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR019786 PROSITE:PS01359 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 HOGENOM:HOG000089984 EMBL:AC009950
HOVERGEN:HBG006294 EMBL:L22342 EMBL:L22343 EMBL:AF280094
EMBL:AF280095 EMBL:AK026488 EMBL:BC019059 IPI:IPI00162549
IPI:IPI00220746 IPI:IPI00398959 IPI:IPI00472430 IPI:IPI00873254
IPI:IPI00913939 PIR:A49515 RefSeq:NP_001171944.1 RefSeq:NP_004500.3
RefSeq:NP_536349.2 UniGene:Hs.145150 ProteinModelPortal:Q9HB58
SMR:Q9HB58 IntAct:Q9HB58 MINT:MINT-1401836 STRING:Q9HB58
PhosphoSite:Q9HB58 DMDM:209572781 PaxDb:Q9HB58 PRIDE:Q9HB58
DNASU:3431 Ensembl:ENST00000258381 Ensembl:ENST00000258382
Ensembl:ENST00000358662 GeneID:3431 KEGG:hsa:3431 UCSC:uc002vqg.3
UCSC:uc002vqh.3 UCSC:uc010fxj.3 UCSC:uc010fxk.3 CTD:3431
GeneCards:GC02M230997 HGNC:HGNC:5401 HPA:HPA047036 MIM:235550
MIM:604457 neXtProt:NX_Q9HB58 Orphanet:79124 PharmGKB:PA35104
eggNOG:NOG306672 OMA:DGTSEMN GenomeRNAi:3431 NextBio:13528
ArrayExpress:Q9HB58 Bgee:Q9HB58 CleanEx:HS_SP110
Genevestigator:Q9HB58 GermOnline:ENSG00000135899 Uniprot:Q9HB58
Length = 689
Score = 134 (52.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +CC GG+LLCC TCP +H C PP+E W C C
Sbjct: 536 ECEVCCQGGQLLCCGTCPRVFHEDCHIPPVE-AKRMLWSCTFC 577
>UNIPROTKB|F1PFZ4 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AAEX03006365 EMBL:AAEX03006366
Ensembl:ENSCAFT00000018361 Uniprot:F1PFZ4
Length = 2716
Score = 150 (57.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 117 HLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKD 176
HL ++S+KK I +SKL + + + EK +E + + + G S K
Sbjct: 847 HL-RTSYKKKIKSSKLDGLLERRVKQFTLEEKQRLEKMKLEGGIKG---IGKTCTSSLKS 902
Query: 177 VDDGQGIKTSIKVHEPRICRGRHSNKEAMTESKDV-----DSKKSI-RVQDSSTATNAVH 230
+ + I + + + R S + +++DV S SI R+ D TN ++
Sbjct: 903 LSESSVITKAKEGCQSDSLRQEQSPNTSNGKTEDVIRGCSQSDSSILRINDPDHTTNRLY 962
Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 18/85 (21%), Positives = 35/85 (41%)
Query: 149 DDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTES 208
D+ + ++ K T D+E+ KD D +G S E + + + + E
Sbjct: 748 DESDRRKSPRSPKKIKTEPDSEKGEVKDSDAAKGADQS----EMDVSKITEKKDQDVQEI 803
Query: 209 KDVDSKKSIRVQDSSTATNAVHHEP 233
D D++K + ++ + V EP
Sbjct: 804 LDSDNEKPFK-EEPMEIDDDVKTEP 827
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 252 VNEQGAAGKQLAENAEISMPHTDKDTTDKLLILRDVMLESMKSHDKLLQASKSAPIQ--- 308
+ EQ KQ + EI HT + + +I + V+++ + L Q P +
Sbjct: 2303 LREQQQKKKQ--QQIEIKREHTLQASNQSEIIQKQVVMKHNAVIEHLKQKKTMTPAEREE 2360
Query: 309 NRTMV 313
N+ M+
Sbjct: 2361 NQRMI 2365
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/122 (31%), Positives = 54/122 (44%)
Query: 36 SLDSP--DLKDNGSLDKRQYTIGEDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPL 92
S SP ++ NGS ++ I E G E C + N +L CD C YH CL PPL
Sbjct: 244 SAQSPVQTIQVNGSTSLKRPLI-ERGEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPL 302
Query: 93 EDVPPGSWKCPSCS-ELEDLEKPISHLWK-SSFKKSILASKLVMQVRHKESSQSFFEKDD 150
+P W C +C + D + WK SS K+ + R+ S + +DD
Sbjct: 303 TSIPKEDWYCDACKFNISDYDPRKGFKWKLSSLKERSAEIFNTLGERNSSSKLTNLTEDD 362
Query: 151 VE 152
+E
Sbjct: 363 IE 364
>ZFIN|ZDB-GENE-050324-2 [details] [associations]
symbol:whsc1l1 "Wolf-Hirschhorn syndrome candidate
1-like 1" species:7955 "Danio rerio" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-050324-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:BX294119
EMBL:CT027767 IPI:IPI00803597 Ensembl:ENSDART00000091115
Bgee:F1QV68 Uniprot:F1QV68
Length = 1521
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/142 (30%), Positives = 61/142 (42%)
Query: 50 KRQY-TIGEDGHYYECLICCNGGELLCCDT--CPNTYHLQCLTPPLEDVPPGSWKCP--S 104
KR+ T + H C C GGEL+ CD CP YHL CL L P G W+CP
Sbjct: 1381 KRKLKTESKQTHELYCYCCGEGGELVMCDKKDCPKAYHLLCLN--LSKPPYGRWECPWHQ 1438
Query: 105 CSELEDLEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFE-KDDVECLAEKQ--TVS 161
CS + H +SF + +L + K+ S + K + A + TV
Sbjct: 1439 CSVCQRTATSFCHFCPASFCREHERGQLAVSALDKQPCCSNHDPKRPLGPQANRSQVTVK 1498
Query: 162 KRNTFGD-NEECSTKDVDDGQG 182
K G+ NEE ++ + G G
Sbjct: 1499 KEPLDGNANEEEEEEEEETGDG 1520
>UNIPROTKB|P58268 [details] [associations]
symbol:REQ "Zinc finger protein ubi-d4" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 GO:GO:0005634
GO:GO:0005737 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 EMBL:AF362751 IPI:IPI00591152
RefSeq:NP_989662.1 UniGene:Gga.48 ProteinModelPortal:P58268
GeneID:374236 KEGG:gga:374236 CTD:5977 InParanoid:P58268 KO:K13196
OrthoDB:EOG41JZD4 NextBio:20813734 Uniprot:P58268
Length = 405
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C IC N +LL CD C YH+ CLTPP+ + P GSW C C +L
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDL 391
>UNIPROTKB|I3LNG0 [details] [associations]
symbol:I3LNG0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
GeneTree:ENSGT00530000063194 Ensembl:ENSSSCT00000027540
Uniprot:I3LNG0
Length = 314
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C++C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 255 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 302
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 150 (57.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C G+LLCC+TC YHL+C+ PPLE+VP W+C C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 117 HLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECSTKD 176
HL ++S+KK I +SKL + + + EK +E + + + G S K
Sbjct: 973 HL-RTSYKKKIKSSKLDGLLERRVKQFTLEEKQRLEKMKLEGGIKG---IGKTCTSSLKS 1028
Query: 177 VDDGQGIKTSIKVHEPRICRGRHSNKEAMTESKDV-----DSKKSI-RVQDSSTATNAVH 230
+ + I + + + R S + +++DV S SI R+ D TN ++
Sbjct: 1029 LSESSVITKAKEGCQSDSLRQEQSPNTSNGKTEDVIRGCSQSDSSILRINDPDHTTNRLY 1088
Score = 39 (18.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 18/85 (21%), Positives = 35/85 (41%)
Query: 149 DDVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTES 208
D+ + ++ K T D+E+ KD D +G S E + + + + E
Sbjct: 874 DESDRRKSPRSPKKIKTEPDSEKGEVKDSDAAKGADQS----EMDVSKITEKKDQDVQEI 929
Query: 209 KDVDSKKSIRVQDSSTATNAVHHEP 233
D D++K + ++ + V EP
Sbjct: 930 LDSDNEKPFK-EEPMEIDDDVKTEP 953
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 252 VNEQGAAGKQLAENAEISMPHTDKDTTDKLLILRDVMLESMKSHDKLLQASKSAPIQ--- 308
+ EQ KQ + EI HT + + +I + V+++ + L Q P +
Sbjct: 2429 LREQQQKKKQ--QQIEIKREHTLQASNQSEIIQKQVVMKHNAVIEHLKQKKTMTPAEREE 2486
Query: 309 NRTMV 313
N+ M+
Sbjct: 2487 NQRMI 2491
>UNIPROTKB|E2QZB0 [details] [associations]
symbol:SP140 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 SMART:SM00297 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
Ensembl:ENSCAFT00000017034 Uniprot:E2QZB0
Length = 728
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/95 (31%), Positives = 44/95 (46%)
Query: 59 GHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHL 118
G+ EC C +GGEL CCDTC ++H C PP+E W C C +E L + H
Sbjct: 550 GNSDECETCRDGGELFCCDTCSRSFHEDCHIPPVE-TERSPWSCTFC-RIESLGRQQCHR 607
Query: 119 WKSSFKKSI-----LASKLVMQVRHKESSQSFFEK 148
++ + L + ++ + S SFF K
Sbjct: 608 ESEVLERQMQPEEQLKCEFILLRVYCHSESSFFSK 642
>ZFIN|ZDB-GENE-030131-5132 [details] [associations]
symbol:dpf2l "D4, zinc and double PHD fingers
family 2, like" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 ZFIN:ZDB-GENE-030131-5132 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 EMBL:BX005228
EMBL:BC092130 IPI:IPI00490729 RefSeq:NP_997861.2 UniGene:Dr.75185
STRING:Q58E00 Ensembl:ENSDART00000054243 GeneID:326933
KEGG:dre:326933 CTD:326933 InParanoid:Q58E00 OMA:ERSILMP
OrthoDB:EOG40CHH8 NextBio:20809799 Uniprot:Q58E00
Length = 405
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/100 (33%), Positives = 46/100 (46%)
Query: 23 GEGALNSYAGASLSLDS-PDLKDNGSLDKRQYTI----GEDGHYYECLIC-C-------- 68
G+ ++N G S L S D +G Q+T + ++C+ C C
Sbjct: 290 GDSSMNQKTGQSEELVSCSDCGRSGHPSCLQFTAVMMAAVKTYRWQCIECKCCNVCGTSE 349
Query: 69 NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
N +LL CD C YH+ CL+PP+ D P GSW C C L
Sbjct: 350 NDDQLLFCDDCDRGYHMYCLSPPMSDPPEGSWSCHLCLAL 389
>RGD|1309052 [details] [associations]
symbol:Dpf3 "D4, zinc and double PHD fingers, family 3"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=ISO] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
RGD:1309052 GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0071565
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051 OrthoDB:EOG4T4CX1
IPI:IPI00958271 Ensembl:ENSRNOT00000010703 UCSC:RGD:1309052
ArrayExpress:D3ZMB5 Uniprot:D3ZMB5
Length = 369
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C++C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 310 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 357
>UNIPROTKB|F1N0V2 [details] [associations]
symbol:DPF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0007399
GO:GO:0046872 GO:GO:0008270 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
OMA:TNMTEAV EMBL:DAAA02029576 EMBL:DAAA02029577 EMBL:DAAA02029578
EMBL:DAAA02029579 IPI:IPI00699040 Ensembl:ENSBTAT00000035798
Uniprot:F1N0V2
Length = 378
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C++C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 319 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 366
>UNIPROTKB|Q92784 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0071565 "nBAF complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
eggNOG:NOG271547 HOGENOM:HOG000217918 OrthoDB:EOG4T4CX1 CTD:8110
EMBL:AY803021 EMBL:AK024141 EMBL:AK126933 EMBL:AC004828
EMBL:AC006360 EMBL:AL392024 EMBL:BC060801 EMBL:U43919
IPI:IPI00425378 IPI:IPI00915028 IPI:IPI00915029 IPI:IPI01012933
RefSeq:NP_036206.3 UniGene:Hs.162868 PDB:2KWJ PDB:2KWK PDB:2KWN
PDB:2KWO PDBsum:2KWJ PDBsum:2KWK PDBsum:2KWN PDBsum:2KWO
ProteinModelPortal:Q92784 SMR:Q92784 DIP:DIP-59245N STRING:Q92784
PhosphoSite:Q92784 DMDM:215274167 PRIDE:Q92784 DNASU:8110
Ensembl:ENST00000381216 Ensembl:ENST00000541685
Ensembl:ENST00000556509 GeneID:8110 KEGG:hsa:8110 UCSC:uc001xnc.2
UCSC:uc010ari.1 GeneCards:GC14M073086 HGNC:HGNC:17427 MIM:601672
neXtProt:NX_Q92784 PharmGKB:PA134888535 OMA:TNMTEAV
EvolutionaryTrace:Q92784 GenomeRNAi:8110 NextBio:30759
ArrayExpress:Q92784 Bgee:Q92784 CleanEx:HS_DPF3
Genevestigator:Q92784 GermOnline:ENSG00000205683 Uniprot:Q92784
Length = 378
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C++C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 319 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 366
>MGI|MGI:1917377 [details] [associations]
symbol:Dpf3 "D4, zinc and double PHD fingers, family 3"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 MGI:MGI:1917377
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
eggNOG:NOG271547 HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194
CTD:8110 OMA:TNMTEAV EMBL:AF362750 EMBL:AK039011 EMBL:BC048572
IPI:IPI00117604 IPI:IPI00406793 IPI:IPI00915037 IPI:IPI00915048
RefSeq:NP_001254554.1 RefSeq:NP_478119.1 UniGene:Mm.151308
UniGene:Mm.403230 ProteinModelPortal:P58269 SMR:P58269
STRING:P58269 PhosphoSite:P58269 PaxDb:P58269 PRIDE:P58269
Ensembl:ENSMUST00000177801 Ensembl:ENSMUST00000177959
Ensembl:ENSMUST00000178756 GeneID:70127 KEGG:mmu:70127
UCSC:uc007odc.1 UCSC:uc007odd.1 InParanoid:Q8CAD8 ChiTaRS:DPF3
NextBio:331050 Bgee:P58269 CleanEx:MM_DPF3 Genevestigator:P58269
Uniprot:P58269
Length = 378
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C++C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 319 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 366
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 34 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNSNNKE--QDGRNDFYCW 87
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 88 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 128
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 34 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNSNNKE--QDGRNDFYCW 87
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 88 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 128
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 34 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNSNNKE--QDGRNDFYCW 87
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 88 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 128
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 133 (51.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 39 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNSNNKE--QDGRNDFYCW 92
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 93 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 133
>UNIPROTKB|H9KZW6 [details] [associations]
symbol:H9KZW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0035097
"histone methyltransferase complex" evidence=IEA] [GO:0043627
"response to estrogen stimulus" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00690000101661
EMBL:AADN02067269 EMBL:AADN02067270 Ensembl:ENSGALT00000020812
OMA:ELLPCEL Uniprot:H9KZW6
Length = 725
Score = 127 (49.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC++C C + LL CD C +YH CL PPL+ VP G WKC C
Sbjct: 663 ECIVCEVCGKASDPSRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 711
Score = 46 (21.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 2 PPTAANKKRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDNGSL 48
PPT + I+ + +L G+ + +S+ G+ L SPD + GSL
Sbjct: 439 PPTLRPRPDIL--NEISNLSQGDTS-SSFPGSEPLLGSPDPEGGGSL 482
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 138 (53.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 62 YECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKP 114
Y C IC G +L CD C ++YH CL PPL +P G W CP C +E++ KP
Sbjct: 449 YICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCV-VEEVSKP 503
Score = 43 (20.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 135 QVRHKESSQSFFEKDDVE-CLAE 156
Q +H + SQ ++DD E C AE
Sbjct: 1737 QKKHAQRSQQAAQEDDEEECRAE 1759
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 133 (51.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 14 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNSNNKE--QDGRNDFYCW 67
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 68 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 108
Score = 42 (19.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 22/118 (18%), Positives = 50/118 (42%)
Query: 112 EKPISHLWKSSFKKSILASKLVMQVRH-KESSQSFFEKDDVECLAEKQTVSKRNTFGDNE 170
++ I ++ + K+I + K + + E + E D E +EK S + D E
Sbjct: 527 KRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSED-SEKSDSSDSESISDEE 585
Query: 171 ECSTKDVDDGQGIKTSIKVHEPRICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNA 228
+ S + +D + + + EP + K + + +++K+ ++V S + A
Sbjct: 586 QKSKNEPEDAEDKEGARMDKEPSAVK----KKPKL--ANPMETKEELKVSPSPASEKA 637
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 124 (48.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCC++CP +H CL +E +P GSW C C
Sbjct: 158 CFVCSKGGSLLCCESCPAAFHPDCLN--IE-MPDGSWFCNDC 196
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG+L+ CD CP+ +H CL LEDVP G W C SC
Sbjct: 697 CSVCHYGGKLILCDGCPSAFHANCLG--LEDVPDGDWFCQSC 736
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 8 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 60
>UNIPROTKB|B4DT58 [details] [associations]
symbol:DPF2 "cDNA FLJ54147, highly similar to Zinc-finger
protein ubi-d4" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051 OrthoDB:EOG41JZD4
UniGene:Hs.13495 HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944
EMBL:AK300061 IPI:IPI00908945 SMR:B4DT58 STRING:B4DT58
Ensembl:ENST00000415073 UCSC:uc010roe.2 Uniprot:B4DT58
Length = 207
Score = 120 (47.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 24 EGALNSYAGASLS--LDSPDLKDNGSLDKRQYTIGED--GHYYECLICCNGGELLCCDTC 79
EG + S G+SL L + L+ G+ D R + +D G + +LL CD C
Sbjct: 109 EGLI-SQDGSSLEALLRTDPLEKRGAPDPR---VDDDSLGEFPVTNSRARKDQLLFCDDC 164
Query: 80 PNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
YH+ CLTP + + P GSW C C +L
Sbjct: 165 DRGYHMYCLTPSMSEPPEGSWSCHLCLDL 193
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 132 (51.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 101 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 153
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/70 (28%), Positives = 28/70 (40%)
Query: 124 KKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECS---TKDVDDG 180
KK L + + + K S+ EK D + EK + F D + S TKD G
Sbjct: 654 KKPKLPNPVETKEELKGSTSPASEKADPSSVKEKTSPQPEKDFSDKAKPSPHPTKDKLKG 713
Query: 181 QGIKTSIKVH 190
+ S VH
Sbjct: 714 KDETDSPTVH 723
Score = 41 (19.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 25/116 (21%), Positives = 47/116 (40%)
Query: 112 EKPISHLWKSSFKKSILASKLVMQVRH-KESSQSFFEKDDVECLAEKQTVSKRNTFGDNE 170
++ I ++ + K+I + K + + E + E D E +EK S ++ D E
Sbjct: 569 KRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSED-SEKSDSSGSDSISDEE 627
Query: 171 ECSTKDVDDGQGIKTSIKVHEPRICRGRHS--NK-EAMTESKDVDSKKSIRVQDSS 223
+ S + +D + + + EP + + N E E K S S + SS
Sbjct: 628 QRSKNEPEDAEDKEGTRMDKEPSAVKKKPKLPNPVETKEELKGSTSPASEKADPSS 683
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 81 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 133
>ZFIN|ZDB-GENE-041119-1 [details] [associations]
symbol:zmynd8 "zinc finger, MYND-type containing 8"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
ZFIN:ZDB-GENE-041119-1 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX296530 IPI:IPI00512740
Ensembl:ENSDART00000040235 Bgee:E7FBQ3 Uniprot:E7FBQ3
Length = 1201
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/96 (32%), Positives = 44/96 (45%)
Query: 16 KRKSLPWGEGALNSYAGASLSLDSPD--LKDNGSLDKRQYTIGEDGHY-YECLICCNGGE 72
K+K P GA+NS S P +K + +DG + C +C G+
Sbjct: 64 KKKKKP---GAVNSSKDQSELRHGPFYYVKQPALTTDPVDVVPQDGRNDFYCWVCHREGQ 120
Query: 73 LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+LCC+ CP YH +CL E P G W CP C ++
Sbjct: 121 VLCCELCPRVYHAKCLKLAAE--PEGDWFCPECEKI 154
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 78 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 130
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 64 CLICCNG---GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
C C +G +LL CD C +HL CL P L VP GSW CPSCS+
Sbjct: 35 CEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSK 81
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 108 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 160
>UNIPROTKB|F1SMZ1 [details] [associations]
symbol:SP110 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000770 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR019787 Pfam:PF01342 Pfam:PF03172
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00510000046835 OMA:DGTSEMN EMBL:CU683888
Ensembl:ENSSSCT00000017706 Uniprot:F1SMZ1
Length = 679
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 21/43 (48%), Positives = 23/43 (53%)
Query: 63 ECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +CC GG LLCCDTCP +H C PP W C C
Sbjct: 545 ECEVCCGGGLLLCCDTCPRAFHENCHIPPAV-AKRRPWSCTFC 586
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL E P G W CP C ++
Sbjct: 101 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLAAE--PEGDWFCPECEKI 153
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL E P G W CP C ++
Sbjct: 121 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAE--PEGDWFCPECEKI 173
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 55 IGEDGHY-YECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+ +DG + C +C G++LCC+ CP YH +CL E P G W CP C ++
Sbjct: 99 VPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLKLTAE--PEGDWFCPECEKI 151
>RGD|1307748 [details] [associations]
symbol:Nsd1 "nuclear receptor binding SET domain protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001702 "gastrulation with mouth forming second"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003712
"transcription cofactor activity" evidence=IEA;ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0010452
"histone H3-K36 methylation" evidence=ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISO] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0042054 "histone
methyltransferase activity" evidence=ISO] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1307748 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:CH474032
CTD:64324 KO:K15588 OrthoDB:EOG49GKFN IPI:IPI00779102
RefSeq:NP_001100807.1 UniGene:Rn.224915 Ensembl:ENSRNOT00000060928
GeneID:306764 KEGG:rno:306764 UCSC:RGD:1307748 NextBio:656473
Uniprot:D4AA06
Length = 2381
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCCD+CP +H +CL D+P G+W C C
Sbjct: 1400 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDC 1438
>UNIPROTKB|F1S3C1 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:NIDKMRH
EMBL:CU915382 Ensembl:ENSSSCT00000015341 Uniprot:F1S3C1
Length = 2394
Score = 134 (52.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCCD+CP +H +CL D+P G+W C C
Sbjct: 1407 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDC 1445
>UNIPROTKB|J9NVX7 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002967
EMBL:AAEX03002968 EMBL:AAEX03002969 EMBL:AAEX03002970
Ensembl:ENSCAFT00000045272 Uniprot:J9NVX7
Length = 2429
Score = 134 (52.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCCD+CP +H +CL D+P G+W C C
Sbjct: 1442 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDC 1480
>MGI|MGI:1276545 [details] [associations]
symbol:Nsd1 "nuclear receptor-binding SET-domain protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IMP]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=ISO;IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0010452 "histone H3-K36
methylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IC] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0042799 "histone
methyltransferase activity (H4-K20 specific)" evidence=IDA]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046966
"thyroid hormone receptor binding" evidence=IPI] [GO:0046975
"histone methyltransferase activity (H3-K36 specific)"
evidence=ISO;IDA] [GO:0050681 "androgen receptor binding"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
EMBL:AF064553 MGI:MGI:1276545 Pfam:PF00855 GO:GO:0003714
GO:GO:0005694 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 UniGene:Mm.12964
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0050681 eggNOG:COG2940 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0046975 GO:GO:0035097
HOGENOM:HOG000113857 HOVERGEN:HBG007518 OrthoDB:EOG49GKFN
ChiTaRS:NSD1 EMBL:AK082820 EMBL:AK004485 IPI:IPI00131111 PIR:T14342
UniGene:Mm.168965 ProteinModelPortal:O88491 SMR:O88491
STRING:O88491 PhosphoSite:O88491 PaxDb:O88491 PRIDE:O88491
UCSC:uc007qqd.1 CleanEx:MM_NSD1 Genevestigator:O88491
GermOnline:ENSMUSG00000021488 Uniprot:O88491
Length = 2588
Score = 134 (52.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCCD+CP +H +CL D+P G+W C C
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDC 1646
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 124 (48.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCC++CP +H CL +E +P GSW C C
Sbjct: 830 CFVCSKGGSLLCCESCPAAFHPDCLN--IE-MPDGSWFCNDC 868
Score = 53 (23.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 3 PTAANKKRIVMKRKRK-SLPWGEGALNSYAGASLSLDSPDLK 43
PT A K +++ K WG G L + A AS+S++ K
Sbjct: 305 PTKAEKIKLLKPISGKLRAQWGVGILQAEAAASMSVEERKAK 346
>UNIPROTKB|Q96L73 [details] [associations]
symbol:NSD1 "Histone-lysine N-methyltransferase, H3
lysine-36 and H4 lysine-20 specific" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0016571 "histone methylation" evidence=ISS] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISS]
[GO:0042799 "histone methyltransferase activity (H4-K20 specific)"
evidence=ISS] [GO:0042974 "retinoic acid receptor binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] [GO:0046975 "histone methyltransferase activity
(H3-K36 specific)" evidence=ISS;IDA] [GO:0050681 "androgen receptor
binding" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0003712
"transcription cofactor activity" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0030331 "estrogen receptor binding"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010452 "histone H3-K36 methylation" evidence=ISS;IDA]
[GO:0034770 "histone H4-K20 methylation" evidence=ISS]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0003714 GO:GO:0005694
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0050681 GO:GO:0030331
GO:GO:0046966 eggNOG:COG2940 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0042799 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0016922 GO:GO:0046965 SMART:SM00293 GO:GO:0046975 MIM:130650
Orphanet:3447 Orphanet:821 EMBL:AF380302 EMBL:AY049721
EMBL:AF395588 EMBL:AF322907 IPI:IPI00102107 IPI:IPI00173901
IPI:IPI00332367 RefSeq:NP_071900.2 RefSeq:NP_758859.1
UniGene:Hs.106861 PDB:3OOI PDBsum:3OOI ProteinModelPortal:Q96L73
SMR:Q96L73 DIP:DIP-58517N IntAct:Q96L73 STRING:Q96L73
PhosphoSite:Q96L73 DMDM:32469769 PaxDb:Q96L73 PRIDE:Q96L73
Ensembl:ENST00000347982 Ensembl:ENST00000354179
Ensembl:ENST00000361032 Ensembl:ENST00000439151 GeneID:64324
KEGG:hsa:64324 UCSC:uc003mfr.4 UCSC:uc003mfs.1 UCSC:uc003mft.4
CTD:64324 GeneCards:GC05P176560 HGNC:HGNC:14234 MIM:117550
MIM:277590 MIM:606681 neXtProt:NX_Q96L73 Orphanet:228415
Orphanet:238613 PharmGKB:PA31790 HOGENOM:HOG000113857
HOVERGEN:HBG007518 InParanoid:Q96L73 KO:K15588 OMA:NIDKMRH
OrthoDB:EOG49GKFN PhylomeDB:Q96L73 ChiTaRS:NSD1 GenomeRNAi:64324
NextBio:66241 ArrayExpress:Q96L73 Bgee:Q96L73 CleanEx:HS_NSD1
Genevestigator:Q96L73 GermOnline:ENSG00000165671 Uniprot:Q96L73
Length = 2696
Score = 134 (52.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCCD+CP +H +CL D+P G+W C C
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDC 1748
>UNIPROTKB|E1BM66 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050681 "androgen receptor binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:NIDKMRH EMBL:DAAA02020051 EMBL:DAAA02020048
EMBL:DAAA02020049 EMBL:DAAA02020050 IPI:IPI00716946
Ensembl:ENSBTAT00000034204 Uniprot:E1BM66
Length = 2698
Score = 134 (52.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCCD+CP +H +CL D+P G+W C C
Sbjct: 1713 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDC 1751
>UNIPROTKB|E2R3Q9 [details] [associations]
symbol:NSD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 CTD:64324
KO:K15588 OMA:NIDKMRH EMBL:AAEX03002967 EMBL:AAEX03002968
EMBL:AAEX03002969 EMBL:AAEX03002970 RefSeq:XP_865778.1
Ensembl:ENSCAFT00000026110 GeneID:489094 KEGG:cfa:489094
Uniprot:E2R3Q9
Length = 2698
Score = 134 (52.2 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCCD+CP +H +CL D+P G+W C C
Sbjct: 1711 CFVCSEGGSLLCCDSCPAAFHRECLNI---DIPEGNWYCNDC 1749
>DICTYBASE|DDB_G0282711 [details] [associations]
symbol:DDB_G0282711 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 dictyBase:DDB_G0282711 EMBL:AAFI02000047
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG79337 RefSeq:XP_640220.1
ProteinModelPortal:Q54S19 EnsemblProtists:DDB0216408 GeneID:8623760
KEGG:ddi:DDB_G0282711 InParanoid:Q54S19 OMA:EREYNDE Uniprot:Q54S19
Length = 1361
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 56/268 (20%), Positives = 104/268 (38%)
Query: 14 KRKRKSLPWGEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLIC--CNGG 71
KRKR+SL + N + D+ + ++ ++ + + E L+C CN G
Sbjct: 272 KRKRRSL--NKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTG 329
Query: 72 E----LLCCDT--CPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLEKPISHLWKSSFKK 125
+ +L CDT C YH+ CL P+ VP G W C C D+ + H
Sbjct: 330 KDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFC-RFGDISADL-HSADDDEDG 387
Query: 126 SILASKLVMQVRHKESSQSFFEKD-DVECLAEKQTVSKRNTFGDNEECSTKDVDDGQGIK 184
+I + K + + + K+ + EK+ + E EK+ +R + E KD
Sbjct: 388 AINSQKEIEKQKQKQKEK---EKEREREREREKEKEKERERERERREKEKKDALRSSFSN 444
Query: 185 TSI-KVHEPRICRGRHSNKEAMTESKDVDSKKSIRVQDSSTATNAVHHEPXXXXXXXXXX 243
I K++ G +SN + + + + S + +P
Sbjct: 445 IPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSS 504
Query: 244 XXXXIGNPVNEQGAAGKQLAENAEISMP 271
P+++Q +++ N++ S+P
Sbjct: 505 TTSS-PPPLHQQSKVTSKISPNSQQSIP 531
>UNIPROTKB|F1P0N4 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00589005 EMBL:AADN02033575
EMBL:AADN02033576 Ensembl:ENSGALT00000015230 ArrayExpress:F1P0N4
Uniprot:F1P0N4
Length = 379
Score = 124 (48.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C +C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 320 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCREL 367
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 133 (51.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 34/103 (33%), Positives = 47/103 (45%)
Query: 9 KRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDN--GSLDKRQYTIGEDGHY-YECL 65
+R KRK S P N ++ S SP K G L+ +DG + C
Sbjct: 34 ERTAQKRKFPSPPHSS---NGHSPQDTST-SPIKKKKKPGLLNNNNKE--QDGRNDFYCW 87
Query: 66 ICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
+C G++LCC+ CP YH +CL L P G W CP C ++
Sbjct: 88 VCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPECEKI 128
Score = 41 (19.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 18/82 (21%), Positives = 35/82 (42%)
Query: 112 EKPISHLWKSSFKKSILASKLVMQVRH-KESSQSFFEKDDVECLAEKQTVSKRNTFGDNE 170
++ I ++ + K+I + K + + E + E D E +EK S D+E
Sbjct: 544 KRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSED-SEKSDSSDSEYISDDE 602
Query: 171 ECSTKDVDDGQGIKTSIKVHEP 192
+ S + +D + + S EP
Sbjct: 603 QKSKNEPEDAEDKEGSRMDKEP 624
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 132 (51.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 56 GEDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
GE+ + C C GELL CDTCP YH C+ +E+ P G W C C E
Sbjct: 250 GEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIE 302
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPG-SWKCPSCSELED---LEKPISHLW 119
C IC LL CD+C ++H C+ PPL +VP +W CP C ++ +EK + W
Sbjct: 320 CKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKILCWRW 379
Query: 120 K 120
K
Sbjct: 380 K 380
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 132 (51.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 56 GEDGHYYE-CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
GE+ + C C GELL CDTCP YH C+ +E+ P G W C C E
Sbjct: 250 GEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIE 302
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPG-SWKCPSCSELED---LEKPISHLW 119
C IC LL CD+C ++H C+ PPL +VP +W CP C ++ +EK + W
Sbjct: 320 CKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKILCWRW 379
Query: 120 K 120
K
Sbjct: 380 K 380
>UNIPROTKB|Q8NEZ4 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051568 "histone
H3-K4 methylation" evidence=IDA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 EMBL:AC005631 EMBL:AC006017 EMBL:AY024361
EMBL:AF264750 EMBL:AC104692 EMBL:AB040939 EMBL:AK022687
EMBL:AK075113 EMBL:AL833924 IPI:IPI00168806 IPI:IPI00375729
IPI:IPI00916332 RefSeq:NP_733751.2 UniGene:Hs.647120 PDB:2YSM
PDB:2YUK PDB:3UVL PDB:4ERY PDBsum:2YSM PDBsum:2YUK PDBsum:3UVL
PDBsum:4ERY ProteinModelPortal:Q8NEZ4 SMR:Q8NEZ4 DIP:DIP-48649N
IntAct:Q8NEZ4 STRING:Q8NEZ4 PhosphoSite:Q8NEZ4 DMDM:221222521
PaxDb:Q8NEZ4 PRIDE:Q8NEZ4 Ensembl:ENST00000262189
Ensembl:ENST00000355193 GeneID:58508 KEGG:hsa:58508 UCSC:uc003wky.3
UCSC:uc003wla.3 CTD:58508 GeneCards:GC07M151832 H-InvDB:HIX0007238
H-InvDB:HIX0016202 H-InvDB:HIX0080234 HGNC:HGNC:13726 MIM:606833
neXtProt:NX_Q8NEZ4 PharmGKB:PA30847 HOVERGEN:HBG045586
InParanoid:Q8NEZ4 KO:K09188 OMA:VDPYERP PhylomeDB:Q8NEZ4
ChiTaRS:MLL3 EvolutionaryTrace:Q8NEZ4 GenomeRNAi:58508
NextBio:65023 ArrayExpress:Q8NEZ4 Bgee:Q8NEZ4 CleanEx:HS_MLL3
Genevestigator:Q8NEZ4 GermOnline:ENSG00000055609 Uniprot:Q8NEZ4
Length = 4911
Score = 130 (50.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
EC +C C + G LL CD C +YH CL PPL+ VP G WKC C
Sbjct: 1006 ECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 1054
Score = 57 (25.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 23/99 (23%), Positives = 44/99 (44%)
Query: 124 KKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKRNTFGDNEECST-KDVDDGQG 182
KKS + +++ +V S K + +C EK +K N + S D++DG+
Sbjct: 2814 KKSTVTNEVKTEVLSPNS------KVESKCETEKNDENKDNVDTPCSQASAHSDLNDGE- 2866
Query: 183 IKTSIKVHEPRICRGRHSNKEAMTESKDVDSKKSIRVQD 221
KTS+ +P + R + + A + + + + QD
Sbjct: 2867 -KTSLHPCDPDLFEKRTNRETAGPSANVIQASTQLPAQD 2904
>ZFIN|ZDB-GENE-070705-340 [details] [associations]
symbol:mll3b "myeloid/lymphoid or mixed-lineage
leukemia 3b" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR000637 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00384 SMART:SM00541 SMART:SM00542 ZFIN:ZDB-GENE-070705-340
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:BX324233 EMBL:BX908750 IPI:IPI00932089
Ensembl:ENSDART00000112279 ArrayExpress:F1R598 Bgee:F1R598
Uniprot:F1R598
Length = 4879
Score = 140 (54.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCP---SCSELEDLEK 113
EC +C C + G LL CD C +YH CL PPL++VP GSWKC SC++
Sbjct: 1000 ECTVCEACGQASDPGRLLLCDDCDISYHTYCLDPPLQNVPNGSWKCKWCVSCTQCGATSA 1059
Query: 114 PISHLWKSSFKK----SILASKLVMQVRHKE 140
+ W++++ + + LAS + Q +KE
Sbjct: 1060 GLRCEWQNNYTQCAPCASLASCPLCQQEYKE 1090
Score = 46 (21.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 153 CLAEKQTVSKRN--TFGDNEECST 174
C+++ + RN FGD+E C T
Sbjct: 3582 CVSDTSSTPTRNPMVFGDHEFCET 3605
>UNIPROTKB|F1P0N5 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0071565 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00598666 OMA:TNMTEAV
EMBL:AADN02033575 EMBL:AADN02033576 Ensembl:ENSGALT00000015229
ArrayExpress:F1P0N5 Uniprot:F1P0N5
Length = 416
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C +C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 357 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCREL 404
>FB|FBgn0033015 [details] [associations]
symbol:d4 "d4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 EMBL:AE013599 GO:GO:0046872 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 HSSP:Q14839 KO:K13196 UniGene:Dm.487
GeneID:35485 KEGG:dme:Dmel_CG2682 CTD:35485 FlyBase:FBgn0033015
GenomeRNAi:35485 NextBio:793658 EMBL:AY058600 EMBL:AF427473
RefSeq:NP_610163.1 SMR:Q7K3G5 DIP:DIP-18634N IntAct:Q7K3G5
STRING:Q7K3G5 EnsemblMetazoa:FBtr0086082 UCSC:CG2682-RA
InParanoid:Q7K3G5 OMA:SYDKTSS Uniprot:Q7K3G5
Length = 497
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107
C IC N +LL CD C YH+ CL+PPL P GSW C C E
Sbjct: 445 CSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCME 491
>UNIPROTKB|P58270 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0005634
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 OrthoDB:EOG4T4CX1 EMBL:AF362754 EMBL:AF362753
EMBL:AF362756 EMBL:AF362755 IPI:IPI00575057 IPI:IPI00589005
IPI:IPI00598666 IPI:IPI00600182 RefSeq:NP_989970.1 UniGene:Gga.46
ProteinModelPortal:P58270 GeneID:395351 KEGG:gga:395351 CTD:8110
InParanoid:P58270 NextBio:20815436 Uniprot:P58270
Length = 427
Score = 124 (48.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C +C N +LL CD C YH+ CL PP+ + P GSW C C EL
Sbjct: 368 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCREL 415
>TAIR|locus:2144841 [details] [associations]
symbol:ATXR5 "AT5G09790" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009555 "pollen
development" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IEP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0046976 "histone methyltransferase activity
(H3-K27 specific)" evidence=IDA] [GO:0070734 "histone H3-K27
methylation" evidence=IDA] [GO:0006275 "regulation of DNA
replication" evidence=IGI] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 SMART:SM00249 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 GO:GO:0006275 GO:GO:0009555
GO:GO:0046872 GO:GO:0008270 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0009294 GO:GO:0046976
IPI:IPI00775647 RefSeq:NP_001078559.1 UniGene:At.27076
ProteinModelPortal:F4KFB9 SMR:F4KFB9 PRIDE:F4KFB9
EnsemblPlants:AT5G09790.2 GeneID:830839 KEGG:ath:AT5G09790
OMA:TFIAEYT ArrayExpress:F4KFB9 Uniprot:F4KFB9
Length = 379
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 36/113 (31%), Positives = 47/113 (41%)
Query: 57 EDGHYYECLIC--CNGGE----LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110
ED Y + C C GE LL CD C +H++CL P + VP G+W C CS+
Sbjct: 57 EDEDSYSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCSD--- 113
Query: 111 LEKPISHLWKSSFKKSILASKLVMQVRHKESSQSFFEKDDVECLAEKQTVSKR 163
++P+ L + K Q E SQ K C TV KR
Sbjct: 114 -QRPVRRLSQKKILHFFRIEKHTHQTDKLELSQEETRKRRRSC---SLTVKKR 162
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
C +C GG LLCC++CP +H +CL D+P GSW C C
Sbjct: 1263 CFVCSEGGSLLCCESCPAAFHRECLNI---DMPEGSWYCNDC 1301
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 130 (50.8 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 35/108 (32%), Positives = 48/108 (44%)
Query: 7 NKKRIVMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGE--------D 58
N R V R K+ E L+ + + + S L D+ + R YT G D
Sbjct: 354 NGPRRVHPRFAKTSASKEKELSEFVAVNHGISS--LSDSKNWSSR-YTDGGPNGDSPDLD 410
Query: 59 GHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106
+ EC +C G LLCCD CP YH +C+ +P G W CP C+
Sbjct: 411 ANSDECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPECT 458
Score = 45 (20.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 118 LWKSSFKKSILASKLVMQVRHKESSQSFFE--KDDVECLAEKQTVSKRNTFGDNEECSTK 175
+WK++ + S S+L +QVR+ + + + E + + K ++ F + C K
Sbjct: 921 IWKAAVESSKNISQLALQVRYLDMNIRWSELVRPEQNVQDVKGPETEATIFRNASICVKK 980
Query: 176 DVDD 179
+D+
Sbjct: 981 IIDN 984
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 199 HSNKEAMTESKDVDSKKSIRVQDSSTATNAVHHEP 233
H KE E D+ S + NAV P
Sbjct: 562 HMQKEGGDEVSDIGEPDSANSSSGNLIQNAVRLHP 596
>UNIPROTKB|A6QQS0 [details] [associations]
symbol:DPF2 "D4, zinc and double PHD fingers family 2"
species:9913 "Bos taurus" [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:5977
KO:K13196 OrthoDB:EOG41JZD4 OMA:FPPVKSE EMBL:DAAA02063562
EMBL:BC149969 EMBL:BT030730 IPI:IPI00690122 RefSeq:NP_001093826.1
UniGene:Bt.18954 Ensembl:ENSBTAT00000030078 GeneID:513235
KEGG:bta:513235 InParanoid:A6QQS0 NextBio:20870765 Uniprot:A6QQS0
Length = 391
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C IC N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 330 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 377
>UNIPROTKB|E2R3L8 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
CTD:5977 KO:K13196 EMBL:AAEX03011641 RefSeq:XP_866588.1
ProteinModelPortal:E2R3L8 Ensembl:ENSCAFT00000021663 GeneID:483743
KEGG:cfa:483743 Uniprot:E2R3L8
Length = 391
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C IC N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 330 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 377
>UNIPROTKB|Q92785 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=TAS] [GO:0097190
"apoptotic signaling pathway" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0006917 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 EMBL:CH471076 GO:GO:0097190
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 CTD:5977 KO:K13196 OrthoDB:EOG41JZD4
EMBL:AF001433 EMBL:U94585 EMBL:BT006718 EMBL:AY220877 EMBL:AK291944
EMBL:BC014889 EMBL:U43920 IPI:IPI00983171 RefSeq:NP_006259.1
UniGene:Hs.13495 PDB:3IUF PDBsum:3IUF ProteinModelPortal:Q92785
SMR:Q92785 DIP:DIP-27575N IntAct:Q92785 MINT:MINT-1160145
STRING:Q92785 PhosphoSite:Q92785 DMDM:2842711 PaxDb:Q92785
PeptideAtlas:Q92785 PRIDE:Q92785 DNASU:5977 Ensembl:ENST00000528416
GeneID:5977 KEGG:hsa:5977 UCSC:uc001odm.3 GeneCards:GC11P065103
HGNC:HGNC:9964 HPA:HPA020880 MIM:601671 neXtProt:NX_Q92785
PharmGKB:PA34331 InParanoid:Q92785 ChiTaRS:DPF2
EvolutionaryTrace:Q92785 GenomeRNAi:5977 NextBio:23263
PMAP-CutDB:Q92785 ArrayExpress:Q92785 Bgee:Q92785 CleanEx:HS_DPF2
Genevestigator:Q92785 GermOnline:ENSG00000133884 Uniprot:Q92785
Length = 391
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C IC N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 330 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 377
>MGI|MGI:109529 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 MGI:MGI:109529
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006915
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
GeneTree:ENSGT00530000063194 CTD:5977 KO:K13196 ChiTaRS:DPF2
EMBL:U43921 EMBL:AF108134 EMBL:AK004812 EMBL:AK138047 EMBL:AK144106
EMBL:AK144848 EMBL:AK144954 EMBL:BC007188 EMBL:BC012709 EMBL:U10435
IPI:IPI00117727 RefSeq:NP_035392.1 UniGene:Mm.2651
ProteinModelPortal:Q61103 SMR:Q61103 DIP:DIP-59247N IntAct:Q61103
STRING:Q61103 PhosphoSite:Q61103 PaxDb:Q61103 PRIDE:Q61103
Ensembl:ENSMUST00000136983 GeneID:19708 KEGG:mmu:19708
UCSC:uc008gfw.2 NextBio:297086 Bgee:Q61103 CleanEx:MM_DPF2
Genevestigator:Q61103 GermOnline:ENSMUSG00000024826 Uniprot:Q61103
Length = 391
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
EC C C N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 326 ECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 377
>RGD|1311699 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 RGD:1311699 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:CH473953 CTD:5977 KO:K13196
RefSeq:NP_001101986.1 UniGene:Rn.17281 PRIDE:G3V8U3
Ensembl:ENSRNOT00000028363 GeneID:361711 KEGG:rno:361711
NextBio:677357 Uniprot:G3V8U3
Length = 391
Score = 122 (48.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 23/52 (44%), Positives = 28/52 (53%)
Query: 63 ECLIC--C----NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
EC C C N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 326 ECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 377
>ZFIN|ZDB-GENE-041024-2 [details] [associations]
symbol:dpf2 "D4, zinc and double PHD fingers family
2" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
ZFIN:ZDB-GENE-041024-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
CTD:5977 KO:K13196 EMBL:BC083281 IPI:IPI00483161
RefSeq:NP_001007153.1 UniGene:Dr.37136 ProteinModelPortal:Q5XJL8
PRIDE:Q5XJL8 GeneID:474324 KEGG:dre:474324 InParanoid:Q5XJL8
NextBio:20850390 ArrayExpress:Q5XJL8 Bgee:Q5XJL8 Uniprot:Q5XJL8
Length = 400
Score = 122 (48.0 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 33/100 (33%), Positives = 45/100 (45%)
Query: 23 GEGALNSYAGASLSLDS-PDLKDNGSLDKRQYT----IGEDGHYYECLIC-C-------- 68
G+ +LN G S L S D +G Q+T + ++C+ C C
Sbjct: 285 GDSSLNQKTGQSEELVSCSDCGRSGHPSCLQFTPIMMAAVKTYRWQCIECKCCNICGTSE 344
Query: 69 NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
N +LL CD C YH+ CL+PP+ P GSW C C L
Sbjct: 345 NDDQLLFCDDCDRGYHMYCLSPPMSVPPEGSWSCHLCLAL 384
>UNIPROTKB|F1PXH9 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 OMA:FPPVKSE EMBL:AAEX03011641
ProteinModelPortal:F1PXH9 Ensembl:ENSCAFT00000021664 Uniprot:F1PXH9
Length = 405
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C IC N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 391
>UNIPROTKB|J3KMZ8 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 ProteinModelPortal:J3KMZ8
Ensembl:ENST00000252268 OMA:FPPVKSE Uniprot:J3KMZ8
Length = 405
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C IC N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 391
>UNIPROTKB|F1RRH9 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
OMA:FPPVKSE EMBL:CU856029 Ensembl:ENSSSCT00000014205 Uniprot:F1RRH9
Length = 405
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 64 CLICC---NGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108
C IC N +LL CD C YH+ CLTP + + P GSW C C +L
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDL 391
>RGD|1311245 [details] [associations]
symbol:Rsf1 "remodeling and spacing factor 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006334
"nucleosome assembly" evidence=IEA;ISO] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA;ISO] [GO:0031213 "RSF complex" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050434
"positive regulation of viral transcription" evidence=IEA;ISO]
[GO:0016887 "ATPase activity" evidence=ISO] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
RGD:1311245 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 OrthoDB:EOG441QBQ
GeneTree:ENSGT00530000064411 IPI:IPI00368441
Ensembl:ENSRNOT00000037050 UCSC:RGD:1311245 Uniprot:D3ZGQ8
Length = 1444
Score = 117 (46.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 73 LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE---LEDLEKPISHL 118
+L CD+C + YH CL PPL +P G W CP C E LE+ + L
Sbjct: 910 ILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDL 958
Score = 58 (25.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 135 QVRHKESSQSFFEKDDVECLAEKQTVSKRN-TFGDNEEC-STKDVDDGQGIKTSIK-VHE 191
Q+ +KE S+S + + E + V KR + ++EE +K+ +D + K S + + +
Sbjct: 1219 QINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEESYMSKNSEDDELTKESKRSIRK 1278
Query: 192 PRICRGRHSNKEAMTESKDVDSKKSI-RVQDSSTATNAVH 230
G +S + E + S+K + R++ + ++ H
Sbjct: 1279 RGRSTGEYSEADEEEEEEGKPSRKRLHRIETDEESCDSAH 1318
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 118 (46.6 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 29/76 (38%), Positives = 38/76 (50%)
Query: 60 HYYECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGS-WKCPSC-SELEDLEKP 114
H C +C E L CD C YH+ CL PPL+ VP W CPSC ++ ++ K
Sbjct: 343 HSCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKTDSSEVVKA 402
Query: 115 ISHLWKSSFKKSILAS 130
L K S KK+ + S
Sbjct: 403 GERL-KMSKKKAKMPS 417
Score = 51 (23.0 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 249 GNPVNEQGAAGKQLAENAEISMPHTDKDTTD 279
G+ G+ GK LA N I P D+ T+
Sbjct: 502 GDEFTYTGSGGKNLAGNKRIGAPSADQTLTN 532
>ZFIN|ZDB-GENE-030131-2581 [details] [associations]
symbol:whsc1 "Wolf-Hirschhorn syndrome candidate
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0010452
"histone H3-K36 methylation" evidence=IMP] [GO:0048706 "embryonic
skeletal system development" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2581
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0051216
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0048706 SMART:SM00293 EMBL:CR556722 KO:K11424 GO:GO:0010452
CTD:7468 EMBL:CT573111 IPI:IPI00492725 RefSeq:NP_001076020.1
UniGene:Dr.78031 Ensembl:ENSDART00000009499 GeneID:100000709
KEGG:dre:100000709 HOVERGEN:HBG106834 OMA:FESECLN NextBio:20784754
Uniprot:B8JIA4
Length = 1461
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 30/94 (31%), Positives = 44/94 (46%)
Query: 12 VMKRKRKSLPWGEGALNSYAGASLSLDSPDLKDNGSLDKRQYTIGEDGHYYECLICCNGG 71
+M+ R + + G L AG+ + S + N K+ Y+ + C IC GG
Sbjct: 874 MMRCLRCPVAYHVGDLCVAAGSEMISSSAIVCTNHFRAKKGYSHHSHVNVSWCFICSKGG 933
Query: 72 ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105
LLCC++CP +H CL + P GSW C C
Sbjct: 934 RLLCCESCPAAFHPDCLNIAM---PDGSWFCNDC 964
WARNING: HSPs involving 86 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 322 308 0.00078 116 3 11 23 0.46 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 336
No. of states in DFA: 615 (65 KB)
Total size of DFA: 241 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.08u 0.12s 28.20t Elapsed: 00:00:01
Total cpu time: 28.10u 0.12s 28.22t Elapsed: 00:00:01
Start: Fri May 10 23:29:42 2013 End: Fri May 10 23:29:43 2013
WARNINGS ISSUED: 2