Query 039387
Match_columns 322
No_of_seqs 262 out of 1153
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 15:29:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mm2_A MI2-beta; PHD, zinc fin 99.6 5.9E-16 2E-20 115.0 5.2 54 57-110 5-58 (61)
2 1fp0_A KAP-1 corepressor; PHD 99.6 1.8E-15 6.2E-20 120.5 5.6 58 53-110 17-74 (88)
3 1xwh_A Autoimmune regulator; P 99.6 9E-16 3.1E-20 115.5 3.0 54 58-111 5-58 (66)
4 2l5u_A Chromodomain-helicase-D 99.6 1.1E-15 3.8E-20 113.5 3.3 54 57-110 7-60 (61)
5 2lri_C Autoimmune regulator; Z 99.5 2.1E-15 7E-20 114.1 4.0 52 60-111 11-62 (66)
6 2yql_A PHD finger protein 21A; 99.5 1.6E-15 5.3E-20 110.7 2.9 52 56-107 4-55 (56)
7 3u5n_A E3 ubiquitin-protein li 99.5 5.6E-15 1.9E-19 133.0 6.9 56 57-112 3-58 (207)
8 3o36_A Transcription intermedi 99.5 6.5E-15 2.2E-19 130.1 5.8 54 59-112 2-55 (184)
9 2puy_A PHD finger protein 21A; 99.5 2.8E-15 9.5E-20 110.7 2.5 52 58-109 2-53 (60)
10 1f62_A Transcription factor WS 99.4 3.5E-14 1.2E-18 101.2 2.8 46 63-108 2-50 (51)
11 2yt5_A Metal-response element- 99.4 3.8E-14 1.3E-18 105.9 1.5 54 57-110 2-63 (66)
12 2e6r_A Jumonji/ARID domain-con 99.4 9.1E-14 3.1E-18 111.2 2.7 52 58-109 13-67 (92)
13 2ro1_A Transcription intermedi 99.4 2.9E-13 9.9E-18 120.8 4.1 50 61-110 2-51 (189)
14 1wev_A Riken cDNA 1110020M19; 99.3 1.2E-13 4.2E-18 109.5 1.2 51 60-110 15-74 (88)
15 3asl_A E3 ubiquitin-protein li 99.3 3.3E-13 1.1E-17 102.9 3.6 46 63-108 20-69 (70)
16 2e6s_A E3 ubiquitin-protein li 99.3 4.4E-13 1.5E-17 104.1 4.2 46 62-107 27-76 (77)
17 2l43_A N-teminal domain from h 99.3 5.5E-13 1.9E-17 105.9 1.5 49 60-110 24-77 (88)
18 2ku3_A Bromodomain-containing 99.3 7.8E-13 2.7E-17 101.2 1.4 51 57-109 12-67 (71)
19 3shb_A E3 ubiquitin-protein li 99.3 2.2E-12 7.4E-17 100.3 3.5 45 63-107 28-76 (77)
20 4gne_A Histone-lysine N-methyl 99.2 5.6E-12 1.9E-16 103.7 4.4 55 55-111 9-65 (107)
21 3v43_A Histone acetyltransfera 99.2 6.5E-12 2.2E-16 103.2 4.0 47 61-107 61-111 (112)
22 3ask_A E3 ubiquitin-protein li 99.2 6.5E-12 2.2E-16 115.3 3.1 47 62-108 175-225 (226)
23 2lbm_A Transcriptional regulat 99.2 4.3E-12 1.5E-16 109.1 1.2 56 53-108 55-117 (142)
24 2ysm_A Myeloid/lymphoid or mix 99.2 1.7E-11 5.9E-16 100.0 4.5 49 62-110 55-106 (111)
25 2kwj_A Zinc finger protein DPF 99.2 9.5E-12 3.2E-16 102.6 2.6 47 62-108 59-108 (114)
26 2k16_A Transcription initiatio 99.1 2.6E-11 8.9E-16 92.7 2.6 54 57-110 14-70 (75)
27 1wen_A Inhibitor of growth fam 99.0 4.3E-10 1.5E-14 85.9 4.6 49 60-111 15-68 (71)
28 3ql9_A Transcriptional regulat 99.0 4.7E-11 1.6E-15 101.2 -1.2 56 53-108 49-111 (129)
29 3c6w_A P28ING5, inhibitor of g 98.9 2.3E-10 7.8E-15 84.5 1.6 46 60-108 8-58 (59)
30 2ysm_A Myeloid/lymphoid or mix 98.9 6.3E-10 2.1E-14 90.7 4.2 49 58-106 4-55 (111)
31 2vnf_A ING 4, P29ING4, inhibit 98.9 2.8E-10 9.7E-15 84.1 1.5 45 61-108 10-59 (60)
32 1weu_A Inhibitor of growth fam 98.9 4.8E-09 1.6E-13 83.9 7.4 49 60-111 35-88 (91)
33 2g6q_A Inhibitor of growth pro 98.9 5.2E-10 1.8E-14 83.3 1.7 45 61-108 11-60 (62)
34 2lv9_A Histone-lysine N-methyl 98.8 2.2E-09 7.6E-14 86.5 4.2 45 64-109 33-77 (98)
35 2jmi_A Protein YNG1, ING1 homo 98.7 5.6E-09 1.9E-13 83.3 2.6 45 60-107 25-75 (90)
36 1x4i_A Inhibitor of growth pro 98.4 4.8E-08 1.6E-12 74.3 1.2 45 61-108 6-55 (70)
37 2ri7_A Nucleosome-remodeling f 98.3 3E-08 1E-12 86.2 -1.8 96 59-158 6-106 (174)
38 2kwj_A Zinc finger protein DPF 98.3 4.6E-08 1.6E-12 80.5 -0.8 46 62-107 2-60 (114)
39 1we9_A PHD finger family prote 98.2 3.8E-07 1.3E-11 67.3 1.8 51 60-110 5-60 (64)
40 3o70_A PHD finger protein 13; 98.1 8.8E-07 3E-11 66.9 2.7 49 57-107 15-66 (68)
41 1wil_A KIAA1045 protein; ring 98.1 7E-07 2.4E-11 70.4 1.8 55 59-113 13-81 (89)
42 2xb1_A Pygopus homolog 2, B-ce 98.1 4.4E-07 1.5E-11 73.9 0.5 48 61-110 3-63 (105)
43 3v43_A Histone acetyltransfera 98.1 2.4E-07 8.2E-12 75.9 -1.2 47 61-107 5-63 (112)
44 1wee_A PHD finger family prote 98.1 1.3E-06 4.6E-11 66.1 2.1 51 60-111 15-69 (72)
45 1wem_A Death associated transc 98.0 6.8E-07 2.3E-11 68.3 -0.8 51 60-111 15-73 (76)
46 1wew_A DNA-binding family prot 97.9 2.4E-06 8.1E-11 65.8 1.2 48 60-110 15-74 (78)
47 2vpb_A Hpygo1, pygopus homolog 97.9 1.3E-06 4.5E-11 65.5 -0.9 45 60-106 7-64 (65)
48 1wep_A PHF8; structural genomi 97.8 4.2E-06 1.4E-10 64.4 0.8 49 62-111 13-66 (79)
49 2rsd_A E3 SUMO-protein ligase 97.7 9.5E-06 3.3E-10 60.8 2.0 44 62-108 11-65 (68)
50 2kgg_A Histone demethylase jar 97.6 6.2E-06 2.1E-10 58.8 -0.4 43 64-106 5-52 (52)
51 3o7a_A PHD finger protein 13 v 97.5 2.2E-05 7.6E-10 55.8 1.3 41 66-107 8-51 (52)
52 3kqi_A GRC5, PHD finger protei 97.4 2.2E-05 7.6E-10 59.8 0.3 47 64-110 12-63 (75)
53 3lqh_A Histone-lysine N-methyl 97.0 0.00018 6.3E-09 63.9 1.4 49 63-111 4-66 (183)
54 3kv5_D JMJC domain-containing 96.7 0.00016 5.3E-09 73.0 -1.7 45 62-109 38-89 (488)
55 3a1b_A DNA (cytosine-5)-methyl 96.4 0.00096 3.3E-08 58.2 1.7 58 53-110 71-136 (159)
56 4gne_A Histone-lysine N-methyl 96.3 0.0031 1.1E-07 51.5 4.1 38 64-102 61-98 (107)
57 4bbq_A Lysine-specific demethy 96.3 0.0013 4.6E-08 53.3 1.9 38 72-109 74-115 (117)
58 3kv4_A PHD finger protein 8; e 96.2 0.00025 8.5E-09 70.9 -3.4 48 63-110 6-58 (447)
59 3pur_A Lysine-specific demethy 96.1 0.0014 4.8E-08 66.6 1.1 40 71-110 56-96 (528)
60 3rsn_A SET1/ASH2 histone methy 95.4 0.023 7.9E-07 50.2 6.2 94 67-161 10-113 (177)
61 2pv0_B DNA (cytosine-5)-methyl 95.2 0.0032 1.1E-07 61.8 -0.2 71 54-124 86-165 (386)
62 2ku7_A MLL1 PHD3-CYP33 RRM chi 94.7 0.0076 2.6E-07 48.6 0.9 39 72-110 1-46 (140)
63 2ct0_A Non-SMC element 1 homol 83.7 0.41 1.4E-05 36.3 1.6 49 60-110 14-63 (74)
64 1iym_A EL5; ring-H2 finger, ub 79.2 0.85 2.9E-05 30.9 1.8 44 61-108 5-52 (55)
65 4bbq_A Lysine-specific demethy 76.9 0.5 1.7E-05 37.8 0.0 39 61-110 7-45 (117)
66 2lq6_A Bromodomain-containing 73.1 1.4 4.7E-05 34.3 1.6 30 60-89 16-49 (87)
67 2kiz_A E3 ubiquitin-protein li 72.7 0.63 2.2E-05 33.1 -0.3 48 60-111 13-63 (69)
68 3nw0_A Non-structural maintena 71.6 1.3 4.6E-05 40.2 1.5 48 61-110 180-228 (238)
69 1vyx_A ORF K3, K3RING; zinc-bi 69.1 0.4 1.4E-05 34.6 -2.1 48 60-109 5-57 (60)
70 1x4j_A Ring finger protein 38; 69.0 0.81 2.8E-05 33.3 -0.5 47 60-110 22-71 (75)
71 1weq_A PHD finger protein 7; s 68.8 4.1 0.00014 31.8 3.5 36 72-110 45-81 (85)
72 2ect_A Ring finger protein 126 68.8 2.7 9.3E-05 30.4 2.4 47 61-111 15-64 (78)
73 2l0b_A E3 ubiquitin-protein li 67.9 1.3 4.3E-05 33.8 0.4 46 60-109 39-87 (91)
74 2ecl_A Ring-box protein 2; RNF 67.6 1.4 4.9E-05 32.8 0.7 29 77-109 46-74 (81)
75 1v87_A Deltex protein 2; ring- 63.7 1.1 3.8E-05 35.1 -0.7 35 76-110 58-93 (114)
76 2ecm_A Ring finger and CHY zin 62.8 1 3.5E-05 30.4 -0.9 44 61-108 5-52 (55)
77 2d8s_A Cellular modulator of i 58.6 2.1 7.2E-05 32.4 0.1 49 60-110 14-69 (80)
78 4a0k_B E3 ubiquitin-protein li 58.2 2.3 8E-05 34.7 0.3 27 78-108 83-109 (117)
79 3k1l_B Fancl; UBC, ring, RWD, 57.6 3.8 0.00013 39.9 1.7 48 61-108 308-370 (381)
80 2ep4_A Ring finger protein 24; 55.2 2 6.8E-05 30.9 -0.6 47 61-111 15-64 (74)
81 3dpl_R Ring-box protein 1; ubi 54.5 2.5 8.6E-05 33.7 -0.1 28 77-108 71-98 (106)
82 2d8t_A Dactylidin, ring finger 52.3 4.7 0.00016 28.8 1.1 45 60-109 14-59 (71)
83 1bor_A Transcription factor PM 51.7 16 0.00053 25.0 3.7 44 60-110 5-48 (56)
84 2kn9_A Rubredoxin; metalloprot 49.8 11 0.00038 29.1 2.9 19 91-110 53-71 (81)
85 2ckl_B Ubiquitin ligase protei 49.4 2.4 8.1E-05 35.5 -1.1 48 60-110 53-101 (165)
86 2k1p_A Zinc finger RAN-binding 49.2 6.3 0.00021 25.2 1.2 15 96-110 3-17 (33)
87 3lrq_A E3 ubiquitin-protein li 48.2 3.1 0.0001 32.1 -0.5 48 60-110 21-69 (100)
88 2lk0_A RNA-binding protein 5; 47.2 4.8 0.00016 25.5 0.4 14 97-110 3-16 (32)
89 3l11_A E3 ubiquitin-protein li 46.7 7.8 0.00027 30.2 1.6 46 60-110 14-61 (115)
90 2ysl_A Tripartite motif-contai 46.3 7.1 0.00024 27.6 1.2 49 60-110 19-68 (73)
91 2ecy_A TNF receptor-associated 45.5 5 0.00017 28.1 0.3 45 61-110 15-61 (66)
92 2egp_A Tripartite motif-contai 45.4 14 0.00049 26.3 2.8 48 61-110 12-64 (79)
93 2ecn_A Ring finger protein 141 45.1 2.8 9.7E-05 29.7 -1.1 45 61-110 15-59 (70)
94 3ng2_A RNF4, snurf, ring finge 44.7 2.8 9.7E-05 29.5 -1.1 47 60-110 9-62 (71)
95 1e8j_A Rubredoxin; iron-sulfur 44.7 22 0.00076 24.9 3.6 18 92-110 30-47 (52)
96 2ecj_A Tripartite motif-contai 44.6 8.2 0.00028 25.9 1.3 42 61-105 15-58 (58)
97 4ayc_A E3 ubiquitin-protein li 44.5 4.1 0.00014 33.2 -0.3 45 61-110 53-98 (138)
98 4b2u_A S67; toxin, ICK; NMR {S 43.7 4.7 0.00016 26.0 -0.1 15 96-110 15-29 (36)
99 2xeu_A Ring finger protein 4; 40.1 3.1 0.00011 28.6 -1.5 46 61-110 3-55 (64)
100 1chc_A Equine herpes virus-1 r 40.0 3.7 0.00013 28.8 -1.1 46 61-110 5-51 (68)
101 1dx8_A Rubredoxin; electron tr 39.7 16 0.00054 27.3 2.3 18 92-110 34-51 (70)
102 2v3b_B Rubredoxin 2, rubredoxi 39.1 15 0.00053 26.0 2.1 17 93-110 31-47 (55)
103 1s24_A Rubredoxin 2; electron 37.9 14 0.00046 29.0 1.7 19 91-110 61-79 (87)
104 2yur_A Retinoblastoma-binding 37.7 5.8 0.0002 28.6 -0.4 47 60-108 14-61 (74)
105 3fl2_A E3 ubiquitin-protein li 37.7 4.3 0.00015 32.2 -1.2 47 60-111 51-99 (124)
106 2ecw_A Tripartite motif-contai 37.6 5.6 0.00019 28.7 -0.5 49 61-110 19-70 (85)
107 1yk4_A Rubredoxin, RD; electro 37.5 17 0.0006 25.5 2.1 16 93-109 30-45 (52)
108 2djb_A Polycomb group ring fin 36.6 7.6 0.00026 27.7 0.1 48 60-111 14-62 (72)
109 2ct2_A Tripartite motif protei 36.4 5.4 0.00018 29.2 -0.8 49 61-110 15-67 (88)
110 2csy_A Zinc finger protein 183 35.3 5.2 0.00018 29.2 -1.0 45 61-110 15-60 (81)
111 1jm7_A BRCA1, breast cancer ty 34.9 6.4 0.00022 30.2 -0.6 49 61-110 21-69 (112)
112 2ea6_A Ring finger protein 4; 34.3 2.7 9.2E-05 29.3 -2.7 45 61-109 15-66 (69)
113 1jm7_B BARD1, BRCA1-associated 33.7 23 0.00079 27.7 2.5 45 60-110 21-66 (117)
114 4ap4_A E3 ubiquitin ligase RNF 33.6 5 0.00017 31.4 -1.5 47 60-110 71-124 (133)
115 2ckl_A Polycomb group ring fin 30.8 11 0.00037 29.1 0.1 48 60-111 14-62 (108)
116 2ysj_A Tripartite motif-contai 30.7 6.7 0.00023 27.1 -1.1 43 60-105 19-63 (63)
117 6rxn_A Rubredoxin; electron tr 30.7 27 0.00094 24.0 2.1 17 92-109 24-40 (46)
118 1t1h_A Gspef-atpub14, armadill 30.6 10 0.00034 27.3 -0.1 46 60-110 7-54 (78)
119 1e4u_A Transcriptional repress 29.8 23 0.0008 26.2 1.8 47 61-111 11-62 (78)
120 2d8v_A Zinc finger FYVE domain 29.1 22 0.00075 26.6 1.5 33 60-110 7-39 (67)
121 2ecv_A Tripartite motif-contai 28.9 9.7 0.00033 27.4 -0.5 49 61-110 19-70 (85)
122 2y43_A E3 ubiquitin-protein li 26.3 11 0.00038 28.5 -0.6 47 60-110 21-68 (99)
123 4rxn_A Rubredoxin; electron tr 26.2 28 0.00097 24.7 1.6 17 93-110 31-47 (54)
124 1v5n_A PDI-like hypothetical p 25.5 25 0.00087 27.0 1.4 30 62-91 48-79 (89)
125 1z6u_A NP95-like ring finger p 23.9 11 0.00036 31.5 -1.2 48 61-111 78-125 (150)
126 4b2v_A S64; toxin, ICK; NMR {S 23.3 28 0.00095 21.8 1.0 19 86-108 9-27 (32)
127 1n0z_A ZNF265; zinc finger, RN 22.9 27 0.00093 23.7 0.9 16 95-110 10-27 (45)
No 1
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.60 E-value=5.9e-16 Score=115.02 Aligned_cols=54 Identities=52% Similarity=1.288 Sum_probs=49.6
Q ss_pred CccccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 57 ~~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
.+.++.+|.+|+.+|+||+||.|+++||++||+|||..+|.|+|+|+.|.....
T Consensus 5 ~d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 5 SDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp SCSSCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred ccCCCCcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchh
Confidence 456778899999999999999999999999999999999999999999987544
No 2
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.57 E-value=1.8e-15 Score=120.52 Aligned_cols=58 Identities=34% Similarity=0.768 Sum_probs=51.6
Q ss_pred cccCCccccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 53 YTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 53 ~~~~~~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
.....+.+..+|.+|+.+|+||+||.|+++||++||+|||..+|+|+|+|+.|.....
T Consensus 17 ~~~~~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~~ 74 (88)
T 1fp0_A 17 EFGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 74 (88)
T ss_dssp CCCSSSSSSSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred cccccCCCCCcCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCCc
Confidence 3444566788999999999999999999999999999999999999999999986543
No 3
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.56 E-value=9e-16 Score=115.53 Aligned_cols=54 Identities=46% Similarity=1.257 Sum_probs=49.5
Q ss_pred ccccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 58 DGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 58 ~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
+.++++|.+|+.+|+||+||.|+++||++||+|||..+|.|+|+|+.|......
T Consensus 5 ~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~ 58 (66)
T 1xwh_A 5 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQ 58 (66)
T ss_dssp CSCCCSBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCCC
T ss_pred CCCCCCCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCcccc
Confidence 456788999999999999999999999999999999999999999999876554
No 4
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.56 E-value=1.1e-15 Score=113.53 Aligned_cols=54 Identities=44% Similarity=1.114 Sum_probs=49.1
Q ss_pred CccccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 57 ~~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
+..+..+|.+|+.+|+||+||.|+++||++||+||+..+|+|+|+|+.|..++.
T Consensus 7 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~g~ 60 (61)
T 2l5u_A 7 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGI 60 (61)
T ss_dssp SSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGGSC
T ss_pred cCCCCCCCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccccc
Confidence 445677899999999999999999999999999999999999999999987643
No 5
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.55 E-value=2.1e-15 Score=114.08 Aligned_cols=52 Identities=27% Similarity=0.616 Sum_probs=47.7
Q ss_pred ccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
+...|.+|+.+|+||+||.|+++||++||+|||..+|.|+|+|+.|.....+
T Consensus 11 ~~~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~p 62 (66)
T 2lri_C 11 PGARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDVTP 62 (66)
T ss_dssp TTCCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCCCC
T ss_pred CCCCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCCcc
Confidence 4457999999999999999999999999999999999999999999876554
No 6
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.6e-15 Score=110.66 Aligned_cols=52 Identities=50% Similarity=1.249 Sum_probs=47.8
Q ss_pred CCccccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCcc
Q 039387 56 GEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107 (322)
Q Consensus 56 ~~~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~ 107 (322)
+.+.++.+|.+|+.+|+||+||.|+++||++||+|||..+|.|+|+|+.|..
T Consensus 4 g~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 4 GSSGHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCCSSCCSCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CcCCCCCCCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 3456778899999999999999999999999999999999999999999964
No 7
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.54 E-value=5.6e-15 Score=132.96 Aligned_cols=56 Identities=41% Similarity=1.077 Sum_probs=51.4
Q ss_pred CccccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccCCC
Q 039387 57 EDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112 (322)
Q Consensus 57 ~~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~~ 112 (322)
++.++++|.+|+.+|+||+||+|+++||++||+|||..+|.|+|+|+.|...+...
T Consensus 3 ~d~~~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~~~ 58 (207)
T 3u5n_A 3 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPE 58 (207)
T ss_dssp CCSSCSSBTTTCCCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSCS
T ss_pred CCCCCCCCCCCCCCCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccccc
Confidence 45678899999999999999999999999999999999999999999999876644
No 8
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.52 E-value=6.5e-15 Score=130.06 Aligned_cols=54 Identities=44% Similarity=1.117 Sum_probs=49.8
Q ss_pred cccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccCCC
Q 039387 59 GHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDLE 112 (322)
Q Consensus 59 ~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~~ 112 (322)
.|+++|.+|+.+|+||+||.|+++||++|++|||..+|.|+|+|+.|.....+.
T Consensus 2 ~~~~~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~~~ 55 (184)
T 3o36_A 2 PNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKPE 55 (184)
T ss_dssp CSCSSCTTTCCCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSCS
T ss_pred CCCCccccCCCCCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccccc
Confidence 467889999999999999999999999999999999999999999998776543
No 9
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.52 E-value=2.8e-15 Score=110.67 Aligned_cols=52 Identities=46% Similarity=1.089 Sum_probs=47.9
Q ss_pred ccccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 58 DGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 58 ~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
+.++..|.+|+.+|+||+||.|+++||++|++|||..+|.|+|+|+.|....
T Consensus 2 d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 2 MIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCCCSSCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 4567889999999999999999999999999999999999999999997543
No 10
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.43 E-value=3.5e-14 Score=101.24 Aligned_cols=46 Identities=43% Similarity=1.200 Sum_probs=42.0
Q ss_pred cccccccCC---ceeecccCCCcccccccCCCCCCCCCCCccCccCccc
Q 039387 63 ECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 63 ~C~vC~~gG---~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
.|.+|+.+| +||+||.|+++||++|++|||..+|+|+|+|+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 589999765 6999999999999999999999999999999999753
No 11
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.40 E-value=3.8e-14 Score=105.93 Aligned_cols=54 Identities=30% Similarity=0.750 Sum_probs=47.1
Q ss_pred CccccccccccccC-----CceeecccCCCcccccccCCCCCC--C-CCCCccCccCccccC
Q 039387 57 EDGHYYECLICCNG-----GELLCCDTCPNTYHLQCLTPPLED--V-PPGSWKCPSCSELED 110 (322)
Q Consensus 57 ~~~~~~~C~vC~~g-----G~Ll~CD~C~~~fH~~CL~PPL~~--~-P~g~W~Cp~C~~~~~ 110 (322)
++.++..|.+|+.+ ++||+||.|+++||++|++||+.. + |+|.|+|+.|.....
T Consensus 2 ~~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 2 SSGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 45567889999987 789999999999999999999986 3 899999999986544
No 12
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=9.1e-14 Score=111.17 Aligned_cols=52 Identities=44% Similarity=1.106 Sum_probs=46.4
Q ss_pred ccccccccccccCC---ceeecccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 58 DGHYYECLICCNGG---ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 58 ~~~~~~C~vC~~gG---~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
..++..|.+|+.++ .||+||.|+++||++||+|||..+|.|+|+|+.|....
T Consensus 13 ~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~ 67 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAE 67 (92)
T ss_dssp CCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHH
T ss_pred ccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCcc
Confidence 34566899999876 49999999999999999999999999999999998654
No 13
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.35 E-value=2.9e-13 Score=120.79 Aligned_cols=50 Identities=38% Similarity=0.948 Sum_probs=46.4
Q ss_pred cccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
+++|.+|+.+|+||+||+|+++||++|+.||+..+|.|+|+|+.|.....
T Consensus 2 ~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 2 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp CCCBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSCC
T ss_pred CCcCccCCCCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCCC
Confidence 45799999999999999999999999999999999999999999987643
No 14
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.35 E-value=1.2e-13 Score=109.52 Aligned_cols=51 Identities=29% Similarity=0.763 Sum_probs=45.1
Q ss_pred ccccccccccC-----CceeecccCCCcccccccCCCCCC----CCCCCccCccCccccC
Q 039387 60 HYYECLICCNG-----GELLCCDTCPNTYHLQCLTPPLED----VPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g-----G~Ll~CD~C~~~fH~~CL~PPL~~----~P~g~W~Cp~C~~~~~ 110 (322)
+..+|.+|+.+ +.||+||.|+++||++||+|||.. +|+|.|+|+.|.....
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 45689999986 679999999999999999999985 8999999999976544
No 15
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.35 E-value=3.3e-13 Score=102.89 Aligned_cols=46 Identities=39% Similarity=1.063 Sum_probs=41.5
Q ss_pred ccccccc---CCceeecccCCCcccccccCCCCCCCCCC-CccCccCccc
Q 039387 63 ECLICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPG-SWKCPSCSEL 108 (322)
Q Consensus 63 ~C~vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g-~W~Cp~C~~~ 108 (322)
.|.+|+. +|+||+||.|+++||++||+|||..+|+| +|+|+.|..+
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 4677884 57899999999999999999999999999 9999999854
No 16
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=4.4e-13 Score=104.13 Aligned_cols=46 Identities=43% Similarity=1.091 Sum_probs=42.3
Q ss_pred cccccccc---CCceeecccCCCcccccccCCCCCCCCCC-CccCccCcc
Q 039387 62 YECLICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPG-SWKCPSCSE 107 (322)
Q Consensus 62 ~~C~vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g-~W~Cp~C~~ 107 (322)
..|.+|+. +++||+||.|+++||++||+|||..+|+| +|+|+.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 36889985 67899999999999999999999999999 999999974
No 17
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.28 E-value=5.5e-13 Score=105.90 Aligned_cols=49 Identities=33% Similarity=0.838 Sum_probs=43.7
Q ss_pred ccccccccccCC-----ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGG-----ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG-----~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
++..|.+|+.++ +||+||.|+++||++|++|++ +|+|+|||+.|.....
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHTT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCccc
Confidence 456899999987 899999999999999999985 8999999999986544
No 18
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.26 E-value=7.8e-13 Score=101.24 Aligned_cols=51 Identities=31% Similarity=0.746 Sum_probs=44.0
Q ss_pred CccccccccccccCC-----ceeecccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 57 EDGHYYECLICCNGG-----ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 57 ~~~~~~~C~vC~~gG-----~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
...+...|.+|+.++ +||+||.|+++||++|++|+ .+|+|+|+|+.|....
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~--~vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP--YIPEGQWLCRHCLQSR 67 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS--SCCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCC--cCCCCCcCCccCcCcC
Confidence 345567899999875 89999999999999999988 4899999999997643
No 19
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.26 E-value=2.2e-12 Score=100.31 Aligned_cols=45 Identities=40% Similarity=1.122 Sum_probs=39.5
Q ss_pred cccccccC---CceeecccCCCcccccccCCCCCCCCCCC-ccCccCcc
Q 039387 63 ECLICCNG---GELLCCDTCPNTYHLQCLTPPLEDVPPGS-WKCPSCSE 107 (322)
Q Consensus 63 ~C~vC~~g---G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~-W~Cp~C~~ 107 (322)
.|.+|+.. +.||+||.|+++||++||+|||..+|+|+ |+|+.|..
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 36667665 46999999999999999999999999999 99999975
No 20
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.22 E-value=5.6e-12 Score=103.66 Aligned_cols=55 Identities=42% Similarity=0.858 Sum_probs=47.7
Q ss_pred cCCccccccccccccCCceeecc--cCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 55 IGEDGHYYECLICCNGGELLCCD--TCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 55 ~~~~~~~~~C~vC~~gG~Ll~CD--~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
...+.++++|.+|+.+|+||+|| .|+++||++||+ |..+|+|+|+||.|......
T Consensus 9 ~~~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~ 65 (107)
T 4gne_A 9 EPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECS 65 (107)
T ss_dssp -CCCSSCSSCTTTCCCSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTC
T ss_pred CCcCCCCCCCCcCCCCCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCC
Confidence 34556778999999999999999 899999999999 99999999999998755443
No 21
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.20 E-value=6.5e-12 Score=103.23 Aligned_cols=47 Identities=34% Similarity=0.997 Sum_probs=41.7
Q ss_pred cccccccccC----CceeecccCCCcccccccCCCCCCCCCCCccCccCcc
Q 039387 61 YYECLICCNG----GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107 (322)
Q Consensus 61 ~~~C~vC~~g----G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~ 107 (322)
...|.+|+.+ ++||+||.|+++||++||+|||..+|+|+|+|+.|..
T Consensus 61 C~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 61 CKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TCCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CCccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 3457778765 3799999999999999999999999999999999975
No 22
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.18 E-value=6.5e-12 Score=115.33 Aligned_cols=47 Identities=38% Similarity=1.037 Sum_probs=38.6
Q ss_pred cccccccc---CCceeecccCCCcccccccCCCCCCCCCC-CccCccCccc
Q 039387 62 YECLICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPG-SWKCPSCSEL 108 (322)
Q Consensus 62 ~~C~vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g-~W~Cp~C~~~ 108 (322)
..|.+|+. ++.||+||.|+++||++||+|||..+|.| +|+|+.|...
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 36899987 57899999999999999999999999999 9999999753
No 23
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=99.16 E-value=4.3e-12 Score=109.14 Aligned_cols=56 Identities=30% Similarity=0.755 Sum_probs=49.8
Q ss_pred cccCCccccccccccccCCceeecccCCCcccccccCCCCCC-------CCCCCccCccCccc
Q 039387 53 YTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLED-------VPPGSWKCPSCSEL 108 (322)
Q Consensus 53 ~~~~~~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~-------~P~g~W~Cp~C~~~ 108 (322)
...+++.++++|.+|+.||+|++||.|+++||+.|++|++.. .|.|+|+|+.|...
T Consensus 55 ~~~d~Dg~~d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 55 ISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp CCBCTTSCBCSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred ceecCCCCCCeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 345668889999999999999999999999999999999862 58999999999864
No 24
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.16 E-value=1.7e-11 Score=100.04 Aligned_cols=49 Identities=41% Similarity=0.957 Sum_probs=43.4
Q ss_pred ccccccccCCc---eeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 62 YECLICCNGGE---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 62 ~~C~vC~~gG~---Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
..|.+|+.+++ ||+||.|+++||++||+|||..+|+|+|+|+.|.....
T Consensus 55 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~~ 106 (111)
T 2ysm_A 55 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICIS 106 (111)
T ss_dssp CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCSC
T ss_pred CcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcCC
Confidence 46788888765 99999999999999999999999999999999976543
No 25
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.15 E-value=9.5e-12 Score=102.65 Aligned_cols=47 Identities=45% Similarity=1.159 Sum_probs=41.8
Q ss_pred cccccccc---CCceeecccCCCcccccccCCCCCCCCCCCccCccCccc
Q 039387 62 YECLICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 62 ~~C~vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
..|.+|+. +++||+||.|+++||++||+|||..+|+|+|+|+.|...
T Consensus 59 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 59 KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 35777776 468999999999999999999999999999999999653
No 26
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.09 E-value=2.6e-11 Score=92.66 Aligned_cols=54 Identities=22% Similarity=0.570 Sum_probs=46.3
Q ss_pred CccccccccccccC---CceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 57 EDGHYYECLICCNG---GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 57 ~~~~~~~C~vC~~g---G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...+..+|.+|+.+ +.||+||.|+.+||+.|+++++...|.++|+|+.|.....
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34556789999985 3699999999999999999999888889999999986544
No 27
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.96 E-value=4.3e-10 Score=85.90 Aligned_cols=49 Identities=35% Similarity=0.916 Sum_probs=41.6
Q ss_pred cccccccccc--CCceeeccc--CC-CcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCN--GGELLCCDT--CP-NTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~--gG~Ll~CD~--C~-~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
...+| +|++ .|.||.||. |+ .+||+.|++ |...|.|.|||+.|......
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~~k 68 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESGP 68 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCSSS
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccccc
Confidence 34567 7998 589999999 88 699999999 88899999999999876543
No 28
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.95 E-value=4.7e-11 Score=101.18 Aligned_cols=56 Identities=30% Similarity=0.792 Sum_probs=48.7
Q ss_pred cccCCccccccccccccCCceeecccCCCcccccccCCCCC-----CC--CCCCccCccCccc
Q 039387 53 YTIGEDGHYYECLICCNGGELLCCDTCPNTYHLQCLTPPLE-----DV--PPGSWKCPSCSEL 108 (322)
Q Consensus 53 ~~~~~~~~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~-----~~--P~g~W~Cp~C~~~ 108 (322)
...+++.++++|.+|+.||+|++||.|+++||..|+.|++. ++ |.+.|+|..|...
T Consensus 49 ~~~d~Dg~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 49 ISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp CCBCTTSCBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred cccCCCCCCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 34567889999999999999999999999999999999853 43 7899999999664
No 29
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.92 E-value=2.3e-10 Score=84.46 Aligned_cols=46 Identities=37% Similarity=1.029 Sum_probs=39.7
Q ss_pred cccccccccc--CCceeeccc--CC-CcccccccCCCCCCCCCCCccCccCccc
Q 039387 60 HYYECLICCN--GGELLCCDT--CP-NTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 60 ~~~~C~vC~~--gG~Ll~CD~--C~-~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
+..+| +|++ .|+||.||. |+ .+||+.|++ |...|.|.|+|+.|..+
T Consensus 8 e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 8 EPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 34567 8998 689999999 88 699999999 88899999999999754
No 30
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.91 E-value=6.3e-10 Score=90.75 Aligned_cols=49 Identities=31% Similarity=0.851 Sum_probs=44.4
Q ss_pred ccccccccccccCCce---eecccCCCcccccccCCCCCCCCCCCccCccCc
Q 039387 58 DGHYYECLICCNGGEL---LCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106 (322)
Q Consensus 58 ~~~~~~C~vC~~gG~L---l~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~ 106 (322)
+.++++|.+|+.+|++ |+|+.|+++||++||++++..++.+.|+|+.|.
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 3467889999999876 999999999999999999888889999999986
No 31
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.90 E-value=2.8e-10 Score=84.08 Aligned_cols=45 Identities=38% Similarity=1.009 Sum_probs=38.6
Q ss_pred ccccccccc--CCceeeccc--CC-CcccccccCCCCCCCCCCCccCccCccc
Q 039387 61 YYECLICCN--GGELLCCDT--CP-NTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 61 ~~~C~vC~~--gG~Ll~CD~--C~-~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
..+| +|++ .|.||.||. |+ .+||+.|++ |..+|.|.|+|+.|..+
T Consensus 10 ~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 10 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred CCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 4566 8987 688999999 77 799999999 88999999999999753
No 32
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.86 E-value=4.8e-09 Score=83.89 Aligned_cols=49 Identities=35% Similarity=0.916 Sum_probs=41.6
Q ss_pred cccccccccc--CCceeeccc--CC-CcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCN--GGELLCCDT--CP-NTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~--gG~Ll~CD~--C~-~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
...+| +|++ .|.||.||. |+ .+||+.|++ |...|.+.|||+.|.....+
T Consensus 35 e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~k 88 (91)
T 1weu_A 35 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESGP 88 (91)
T ss_dssp CCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCSS
T ss_pred CCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCCc
Confidence 34567 9998 588999999 87 799999999 78889999999999876553
No 33
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.86 E-value=5.2e-10 Score=83.32 Aligned_cols=45 Identities=38% Similarity=1.029 Sum_probs=39.0
Q ss_pred ccccccccc--CCceeeccc--CC-CcccccccCCCCCCCCCCCccCccCccc
Q 039387 61 YYECLICCN--GGELLCCDT--CP-NTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 61 ~~~C~vC~~--gG~Ll~CD~--C~-~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
..+| +|++ .|.||.||. |+ .+||+.|++ |...|.|.|+||.|...
T Consensus 11 ~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 11 PTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred CcEE-ECCCCCCCCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 3567 8998 689999999 66 999999999 77889999999999764
No 34
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.82 E-value=2.2e-09 Score=86.46 Aligned_cols=45 Identities=24% Similarity=0.771 Sum_probs=37.7
Q ss_pred ccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 64 C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
|..+..+|.||+||.|+.+||+.|++|++..+|+ .|+|+.|....
T Consensus 33 C~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 33 CGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp TSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred CCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 4444456789999999999999999999988884 89999997543
No 35
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.68 E-value=5.6e-09 Score=83.34 Aligned_cols=45 Identities=33% Similarity=0.885 Sum_probs=38.1
Q ss_pred cccccccccc--CCceeecccCC---CcccccccCCCCCCCCCCCccCcc-Ccc
Q 039387 60 HYYECLICCN--GGELLCCDTCP---NTYHLQCLTPPLEDVPPGSWKCPS-CSE 107 (322)
Q Consensus 60 ~~~~C~vC~~--gG~Ll~CD~C~---~~fH~~CL~PPL~~~P~g~W~Cp~-C~~ 107 (322)
...+| +|+. .|+||.||.|. .+||+.|++ |...|.|.|||+. |..
T Consensus 25 ~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 25 EEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCcEE-EeCCCCCCCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 34567 8986 47899999955 899999999 7888999999999 863
No 36
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=4.8e-08 Score=74.31 Aligned_cols=45 Identities=33% Similarity=0.902 Sum_probs=36.9
Q ss_pred ccccccccc--CCceeecccCC---CcccccccCCCCCCCCCCCccCccCccc
Q 039387 61 YYECLICCN--GGELLCCDTCP---NTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 61 ~~~C~vC~~--gG~Ll~CD~C~---~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
..+|. |+. .|.||.||.|+ .+||+.|+. |...|.+.|+|+.|...
T Consensus 6 ~~yC~-C~~~~~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 6 SGYCI-CNQVSYGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CCCST-TSCCCCSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHH
T ss_pred CeEEE-cCCCCCCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCcc
Confidence 34564 876 46899999964 899999999 77788999999999754
No 37
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.34 E-value=3e-08 Score=86.17 Aligned_cols=96 Identities=20% Similarity=0.348 Sum_probs=55.7
Q ss_pred cccccccccccC----CceeecccCCCcccccccCCCCCC-CCCCCccCccCccccCCCCccchhhhhhhhhhHHhhhhh
Q 039387 59 GHYYECLICCNG----GELLCCDTCPNTYHLQCLTPPLED-VPPGSWKCPSCSELEDLEKPISHLWKSSFKKSILASKLV 133 (322)
Q Consensus 59 ~~~~~C~vC~~g----G~Ll~CD~C~~~fH~~CL~PPL~~-~P~g~W~Cp~C~~~~~~~~~~~~~~~~~f~~~~l~~~L~ 133 (322)
.+..+| +|+.+ |.||+||.|+.+||..|++..... ...+.|+|+.|................. ......++
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~l~~~~---~~~l~~il 81 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTPLTEKD---YEGLKRVL 81 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHHHHTTTSBCCHHH---HHHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhccccccccCCHHH---HHHHHHHH
Confidence 345678 99875 459999999999999999843221 2357999999986543211111111111 11122334
Q ss_pred hhhhcccccccccccchhhhhhhhh
Q 039387 134 MQVRHKESSQSFFEKDDVECLAEKQ 158 (322)
Q Consensus 134 ~q~~~~~~~q~ff~~~d~e~l~Ekq 158 (322)
..+..+.....|...++...+.++-
T Consensus 82 ~~l~~~~~~~~F~~pv~~~~~pdY~ 106 (174)
T 2ri7_A 82 RSLQAHKMAWPFLEPVDPNDAPDYY 106 (174)
T ss_dssp HHHHTSGGGTTTSSCCCTTTCHHHH
T ss_pred HHHHhhhhhhhhhcCCCcccCCchH
Confidence 4444444555566666665555553
No 38
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.33 E-value=4.6e-08 Score=80.48 Aligned_cols=46 Identities=33% Similarity=0.755 Sum_probs=37.4
Q ss_pred ccccccccC----------CceeecccCCCcccccccCCCCC---CCCCCCccCccCcc
Q 039387 62 YECLICCNG----------GELLCCDTCPNTYHLQCLTPPLE---DVPPGSWKCPSCSE 107 (322)
Q Consensus 62 ~~C~vC~~g----------G~Ll~CD~C~~~fH~~CL~PPL~---~~P~g~W~Cp~C~~ 107 (322)
+.|.+|..+ ++||+|+.|+++||+.||.+++. .++.+.|+|+.|..
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~ 60 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKS 60 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccCc
Confidence 357777654 48999999999999999997642 56789999999853
No 39
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.20 E-value=3.8e-07 Score=67.32 Aligned_cols=51 Identities=27% Similarity=0.627 Sum_probs=38.9
Q ss_pred ccccccccccC----CceeecccCCCcccccccCCCCCCCC-CCCccCccCccccC
Q 039387 60 HYYECLICCNG----GELLCCDTCPNTYHLQCLTPPLEDVP-PGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g----G~Ll~CD~C~~~fH~~CL~PPL~~~P-~g~W~Cp~C~~~~~ 110 (322)
+..+|.+|+.. +.||.||.|..+||..|++....... ...|+|+.|..+..
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 44578899864 56999999999999999995433222 26899999986543
No 40
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.14 E-value=8.8e-07 Score=66.88 Aligned_cols=49 Identities=22% Similarity=0.591 Sum_probs=38.2
Q ss_pred CccccccccccccC---CceeecccCCCcccccccCCCCCCCCCCCccCccCcc
Q 039387 57 EDGHYYECLICCNG---GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107 (322)
Q Consensus 57 ~~~~~~~C~vC~~g---G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~ 107 (322)
.+....+| +|+.. +.||.||.|..+||..|++.....+| +.|+|+.|..
T Consensus 15 ~~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~ 66 (68)
T 3o70_A 15 YFQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 66 (68)
T ss_dssp TTTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHT
T ss_pred CCCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCC
Confidence 33344567 89874 35999999999999999997655455 7999999975
No 41
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=98.12 E-value=7e-07 Score=70.39 Aligned_cols=55 Identities=22% Similarity=0.501 Sum_probs=45.5
Q ss_pred cccccccccc--cCCceeecccCCCcccccccCCC------------CCCCCCCCccCccCccccCCCC
Q 039387 59 GHYYECLICC--NGGELLCCDTCPNTYHLQCLTPP------------LEDVPPGSWKCPSCSELEDLEK 113 (322)
Q Consensus 59 ~~~~~C~vC~--~gG~Ll~CD~C~~~fH~~CL~PP------------L~~~P~g~W~Cp~C~~~~~~~~ 113 (322)
.+++.|.||. ..++++.|..|.++||..||.++ +...+...|.|+.|.....-..
T Consensus 13 ~~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~lLLt 81 (89)
T 1wil_A 13 VNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNINLLLT 81 (89)
T ss_dssp CCSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCCSSSC
T ss_pred CCCcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhhhhcc
Confidence 3677899999 46789999999999999999876 4566778999999987666444
No 42
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.11 E-value=4.4e-07 Score=73.93 Aligned_cols=48 Identities=21% Similarity=0.744 Sum_probs=39.4
Q ss_pred cccccccccC----Cceeecc-cCCCcccccccCCCCCC--------CCCCCccCccCccccC
Q 039387 61 YYECLICCNG----GELLCCD-TCPNTYHLQCLTPPLED--------VPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~g----G~Ll~CD-~C~~~fH~~CL~PPL~~--------~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|+++ ++++.|| .|..+||..|++ |.. .|.+.|+|+.|.....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVg--lt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTG--MTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTT--CCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCC--cCHHHHHhhccCCCCCEECccccCcCC
Confidence 3569999886 5799998 999999999999 443 4668999999987654
No 43
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.10 E-value=2.4e-07 Score=75.87 Aligned_cols=47 Identities=32% Similarity=0.685 Sum_probs=36.8
Q ss_pred ccccccccc---------CCceeecccCCCcccccccCC--CC-CCCCCCCccCccCcc
Q 039387 61 YYECLICCN---------GGELLCCDTCPNTYHLQCLTP--PL-EDVPPGSWKCPSCSE 107 (322)
Q Consensus 61 ~~~C~vC~~---------gG~Ll~CD~C~~~fH~~CL~P--PL-~~~P~g~W~Cp~C~~ 107 (322)
..+|.+|.. +++||.|+.|+++||++||+. ++ ..++.+.|+|+.|..
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~ 63 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKT 63 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCc
Confidence 346888854 357999999999999999974 22 356789999999963
No 44
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.05 E-value=1.3e-06 Score=66.10 Aligned_cols=51 Identities=29% Similarity=0.629 Sum_probs=38.8
Q ss_pred ccccccccccC---C-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCNG---G-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~g---G-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
...+| +|+.. | .||.||.|..+||..|++..........|+|+.|.....+
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~p 69 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSGP 69 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCSS
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCCCC
Confidence 44568 69864 4 5999999999999999996533233479999999876554
No 45
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.97 E-value=6.8e-07 Score=68.28 Aligned_cols=51 Identities=25% Similarity=0.651 Sum_probs=38.1
Q ss_pred ccccccccccC---CceeecccCCCcccccccCCCCCCC-----CCCCccCccCccccCC
Q 039387 60 HYYECLICCNG---GELLCCDTCPNTYHLQCLTPPLEDV-----PPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~g---G~Ll~CD~C~~~fH~~CL~PPL~~~-----P~g~W~Cp~C~~~~~~ 111 (322)
+..+| +|+.. +.||.||.|..+||..|++...... +...|+|+.|.....+
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 34567 78874 5799999999999999999432110 2478999999876554
No 46
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.91 E-value=2.4e-06 Score=65.84 Aligned_cols=48 Identities=27% Similarity=0.683 Sum_probs=37.3
Q ss_pred ccccccccccC---Cceeecc--cCCCcccccccCCCCCCCC-------CCCccCccCccccC
Q 039387 60 HYYECLICCNG---GELLCCD--TCPNTYHLQCLTPPLEDVP-------PGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g---G~Ll~CD--~C~~~fH~~CL~PPL~~~P-------~g~W~Cp~C~~~~~ 110 (322)
...+| +|+.. |.||.|| .|..+||..|++. ...+ ...|+|+.|.....
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi--~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVIL--PDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSC--CCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEcc--ccccccccccCCCCEECCCCCcccC
Confidence 34567 79875 6799999 9999999999994 3333 26899999986554
No 47
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.87 E-value=1.3e-06 Score=65.47 Aligned_cols=45 Identities=27% Similarity=0.826 Sum_probs=36.2
Q ss_pred ccccccccccC----Cceeecc-cCCCcccccccCCCCCC--------CCCCCccCccCc
Q 039387 60 HYYECLICCNG----GELLCCD-TCPNTYHLQCLTPPLED--------VPPGSWKCPSCS 106 (322)
Q Consensus 60 ~~~~C~vC~~g----G~Ll~CD-~C~~~fH~~CL~PPL~~--------~P~g~W~Cp~C~ 106 (322)
....|.+|+++ ..+|.|| .|..+||..|++ |+. .|.+.|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg--lt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG--MTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT--CCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccC--CCHHHHHHhhccCCCcEECcCcc
Confidence 34579999975 2599999 999999999999 543 377899999985
No 48
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.79 E-value=4.2e-06 Score=64.43 Aligned_cols=49 Identities=20% Similarity=0.560 Sum_probs=36.2
Q ss_pred ccccccccC----CceeecccCCCcccccccCCCCCCC-CCCCccCccCccccCC
Q 039387 62 YECLICCNG----GELLCCDTCPNTYHLQCLTPPLEDV-PPGSWKCPSCSELEDL 111 (322)
Q Consensus 62 ~~C~vC~~g----G~Ll~CD~C~~~fH~~CL~PPL~~~-P~g~W~Cp~C~~~~~~ 111 (322)
.+| +|+.. +.||.||.|..+||..|++-..... ....|+|+.|.....+
T Consensus 13 ~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~ 66 (79)
T 1wep_A 13 VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGP 66 (79)
T ss_dssp CCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCS
T ss_pred cEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccCC
Confidence 345 78764 5699999999999999998432211 1368999999876543
No 49
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.74 E-value=9.5e-06 Score=60.85 Aligned_cols=44 Identities=30% Similarity=0.767 Sum_probs=32.6
Q ss_pred cccccccc---CCceeeccc--CCCcccccccCCCCCCCC------CCCccCccCccc
Q 039387 62 YECLICCN---GGELLCCDT--CPNTYHLQCLTPPLEDVP------PGSWKCPSCSEL 108 (322)
Q Consensus 62 ~~C~vC~~---gG~Ll~CD~--C~~~fH~~CL~PPL~~~P------~g~W~Cp~C~~~ 108 (322)
..| +|+. .|.||.||. |..+||..|++- ...| ...|+|+.|+..
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi--~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLI--PDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCC--CSSTTSCCCCCSSCCCHHHHHH
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCC--CcccccccCCCCcEECcCccCc
Confidence 446 6865 467999995 999999999983 2222 147999999753
No 50
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.63 E-value=6.2e-06 Score=58.82 Aligned_cols=43 Identities=21% Similarity=0.506 Sum_probs=31.4
Q ss_pred ccccccC----Cceeecc-cCCCcccccccCCCCCCCCCCCccCccCc
Q 039387 64 CLICCNG----GELLCCD-TCPNTYHLQCLTPPLEDVPPGSWKCPSCS 106 (322)
Q Consensus 64 C~vC~~g----G~Ll~CD-~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~ 106 (322)
|.+|+.+ +.||.|| .|..+||..|++-.......+.|+|+.|.
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 5667653 3599999 89999999999932222123789999994
No 51
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.52 E-value=2.2e-05 Score=55.84 Aligned_cols=41 Identities=27% Similarity=0.767 Sum_probs=32.7
Q ss_pred cccc---CCceeecccCCCcccccccCCCCCCCCCCCccCccCcc
Q 039387 66 ICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSE 107 (322)
Q Consensus 66 vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~ 107 (322)
+|+. ++.||.||.|..+||..|++.....+| +.|+|+.|..
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 4665 457999999999999999996544444 6999999963
No 52
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.43 E-value=2.2e-05 Score=59.83 Aligned_cols=47 Identities=23% Similarity=0.655 Sum_probs=35.1
Q ss_pred ccccccC----CceeecccCCCcccccccCCCCCCCCC-CCccCccCccccC
Q 039387 64 CLICCNG----GELLCCDTCPNTYHLQCLTPPLEDVPP-GSWKCPSCSELED 110 (322)
Q Consensus 64 C~vC~~g----G~Ll~CD~C~~~fH~~CL~PPL~~~P~-g~W~Cp~C~~~~~ 110 (322)
..+|+.. +.||.||.|..+||..|++......+. ..|+|+.|.....
T Consensus 12 yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~ 63 (75)
T 3kqi_A 12 YCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHG 63 (75)
T ss_dssp ETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHC
T ss_pred EEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCC
Confidence 3478763 469999999999999999944333332 5799999986544
No 53
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=96.98 E-value=0.00018 Score=63.88 Aligned_cols=49 Identities=22% Similarity=0.591 Sum_probs=35.7
Q ss_pred cccccccC---C----ceeecccCCCcccccccCCCCC------CCCC-CCccCccCccccCC
Q 039387 63 ECLICCNG---G----ELLCCDTCPNTYHLQCLTPPLE------DVPP-GSWKCPSCSELEDL 111 (322)
Q Consensus 63 ~C~vC~~g---G----~Ll~CD~C~~~fH~~CL~PPL~------~~P~-g~W~Cp~C~~~~~~ 111 (322)
+|.+|+.. + .||.||.|..+||..|++..-. ..|+ ..|+|+.|......
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 47777753 3 3999999999999999984310 1232 37999999876553
No 54
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.68 E-value=0.00016 Score=72.99 Aligned_cols=45 Identities=27% Similarity=0.787 Sum_probs=34.6
Q ss_pred cccccccc----CCceeecccCCCcccccccCCCCCCCCC---CCccCccCcccc
Q 039387 62 YECLICCN----GGELLCCDTCPNTYHLQCLTPPLEDVPP---GSWKCPSCSELE 109 (322)
Q Consensus 62 ~~C~vC~~----gG~Ll~CD~C~~~fH~~CL~PPL~~~P~---g~W~Cp~C~~~~ 109 (322)
.+| +|+. +|.||.||.|..+||..|++ +...+. +.|+|+.|....
T Consensus 38 ~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvg--l~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 38 VYC-VCRQPYDVNRFMIECDICKDWFHGSCVG--VEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp EET-TTTEECCTTSCEEEBTTTCCEEEHHHHT--CCGGGGGGEEEBCCHHHHHHH
T ss_pred eEE-eCCCcCCCCCCeEEccCCCCceeeeecC--cCcccccCCCEEECCCCcCCc
Confidence 345 8886 35699999999999999998 443332 579999997543
No 55
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=96.41 E-value=0.00096 Score=58.17 Aligned_cols=58 Identities=28% Similarity=0.775 Sum_probs=46.8
Q ss_pred cccCCccccccccccccCCceeecc--cCCCcccccccCCCCCC------CCCCCccCccCccccC
Q 039387 53 YTIGEDGHYYECLICCNGGELLCCD--TCPNTYHLQCLTPPLED------VPPGSWKCPSCSELED 110 (322)
Q Consensus 53 ~~~~~~~~~~~C~vC~~gG~Ll~CD--~C~~~fH~~CL~PPL~~------~P~g~W~Cp~C~~~~~ 110 (322)
-..+++..+.+|.+|+.||+|++|| .|+++|=..|+.--+.. .....|.|--|.....
T Consensus 71 f~~DeDG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~l 136 (159)
T 3a1b_A 71 YQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGT 136 (159)
T ss_dssp TCBCTTSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSCE
T ss_pred cccCCCCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCccH
Confidence 4567788889999999999999999 89999999998632221 3456899999987653
No 56
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=96.31 E-value=0.0031 Score=51.49 Aligned_cols=38 Identities=18% Similarity=0.443 Sum_probs=32.6
Q ss_pred ccccccCCceeecccCCCcccccccCCCCCCCCCCCccC
Q 039387 64 CLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKC 102 (322)
Q Consensus 64 C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~C 102 (322)
|.+|+.... +.|..||++||..|+++.|...+.+.|+|
T Consensus 61 C~~C~k~~~-~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 61 CDECSSAAV-SFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp CTTTCSBCC-EECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCcCCCCCC-cCcCCCCcchhhhccCCcceecCCCCcee
Confidence 556665554 78999999999999999999889999997
No 57
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.30 E-value=0.0013 Score=53.25 Aligned_cols=38 Identities=29% Similarity=0.707 Sum_probs=29.1
Q ss_pred ceeecccCCCcccccccCCCCCCCCCC----CccCccCcccc
Q 039387 72 ELLCCDTCPNTYHLQCLTPPLEDVPPG----SWKCPSCSELE 109 (322)
Q Consensus 72 ~Ll~CD~C~~~fH~~CL~PPL~~~P~g----~W~Cp~C~~~~ 109 (322)
.|+.|+.|..+||..|+.++...++.+ .|+|+.|....
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 388999999999999999876544433 49999998653
No 58
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=96.23 E-value=0.00025 Score=70.87 Aligned_cols=48 Identities=23% Similarity=0.558 Sum_probs=35.1
Q ss_pred ccccccc----CCceeecccCCCcccccccCCCCCCCC-CCCccCccCccccC
Q 039387 63 ECLICCN----GGELLCCDTCPNTYHLQCLTPPLEDVP-PGSWKCPSCSELED 110 (322)
Q Consensus 63 ~C~vC~~----gG~Ll~CD~C~~~fH~~CL~PPL~~~P-~g~W~Cp~C~~~~~ 110 (322)
.+.+|+. +|.||.||.|..+||..|++-.-...+ .+.|+|+.|.....
T Consensus 6 ~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp EETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHC
T ss_pred eEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccC
Confidence 3457776 367999999999999999983322111 26799999976544
No 59
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=96.07 E-value=0.0014 Score=66.62 Aligned_cols=40 Identities=23% Similarity=0.500 Sum_probs=30.3
Q ss_pred CceeecccCCCcccccccCCCCCC-CCCCCccCccCccccC
Q 039387 71 GELLCCDTCPNTYHLQCLTPPLED-VPPGSWKCPSCSELED 110 (322)
Q Consensus 71 G~Ll~CD~C~~~fH~~CL~PPL~~-~P~g~W~Cp~C~~~~~ 110 (322)
..||.||.|..+||..|++-.-.. ...+.|+||.|.....
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~g 96 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTG 96 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHHC
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCCC
Confidence 469999999999999999943222 2236899999976433
No 60
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.43 E-value=0.023 Score=50.24 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=51.8
Q ss_pred cccCCc----eeecccCCCcccccccCCCCCC-CC---CCCccCccCccccC-CCCccchhhhhhhhhhHHhhhhhhhhh
Q 039387 67 CCNGGE----LLCCDTCPNTYHLQCLTPPLED-VP---PGSWKCPSCSELED-LEKPISHLWKSSFKKSILASKLVMQVR 137 (322)
Q Consensus 67 C~~gG~----Ll~CD~C~~~fH~~CL~PPL~~-~P---~g~W~Cp~C~~~~~-~~~~~~~~~~~~f~~~~l~~~L~~q~~ 137 (322)
|+++|+ +|.|+.|.++||..|+..+... +| -..+.|..|...+. ..+.....| .++..+-|.+-......
T Consensus 10 CG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g~E~f~R~~~~w-~~v~~laLyNL~~~~~~ 88 (177)
T 3rsn_A 10 EENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNTYFLRKQANL-KEMCLSALANLTWQSRT 88 (177)
T ss_dssp -CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTSSCEEEECCCCH-HHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCCcceeEeccCCH-HHHHHHHHHhhhhhhhh
Confidence 777664 9999999999999999854432 22 22567999976542 111111112 12222222221101111
Q ss_pred cccccccccccc-hhhhhhhhhhhh
Q 039387 138 HKESSQSFFEKD-DVECLAEKQTVS 161 (322)
Q Consensus 138 ~~~~~q~ff~~~-d~e~l~Ekq~~~ 161 (322)
.....+.||+-. +.-+++|+.=-.
T Consensus 89 ~~~~~k~yF~~~~dIipfI~~nWe~ 113 (177)
T 3rsn_A 89 QDEHPKTMFSKDKDIIPFIDKYWEC 113 (177)
T ss_dssp HCSSCCSCEETTTTHHHHHHHTGGG
T ss_pred cccCccccccccchHHHHHHHHHHH
Confidence 223457788854 888898885333
No 61
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=95.17 E-value=0.0032 Score=61.83 Aligned_cols=71 Identities=27% Similarity=0.610 Sum_probs=50.4
Q ss_pred ccCCccccccccccccCCceeecc--cCCCcccccccCCCCC------CCCCCCccCccCccccC-CCCccchhhhhhhh
Q 039387 54 TIGEDGHYYECLICCNGGELLCCD--TCPNTYHLQCLTPPLE------DVPPGSWKCPSCSELED-LEKPISHLWKSSFK 124 (322)
Q Consensus 54 ~~~~~~~~~~C~vC~~gG~Ll~CD--~C~~~fH~~CL~PPL~------~~P~g~W~Cp~C~~~~~-~~~~~~~~~~~~f~ 124 (322)
..+++..+.+|..|+.||+|++|| .|+++|=..|+.--+. ......|.|--|..... ..-.....|...++
T Consensus 86 ~~D~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p~~~ll~~r~~w~~~~~ 165 (386)
T 2pv0_B 86 LYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLK 165 (386)
T ss_dssp CBCSSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCCEETTEEBCSSHHHHHH
T ss_pred ccCCCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcchHhhhhhhhhHHHHHH
Confidence 456778889999999999999999 9999999999973321 12235799999987653 22223344544433
No 62
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=94.70 E-value=0.0076 Score=48.57 Aligned_cols=39 Identities=21% Similarity=0.566 Sum_probs=29.4
Q ss_pred ceeecccCCCcccccccCCCC------CCCCC-CCccCccCccccC
Q 039387 72 ELLCCDTCPNTYHLQCLTPPL------EDVPP-GSWKCPSCSELED 110 (322)
Q Consensus 72 ~Ll~CD~C~~~fH~~CL~PPL------~~~P~-g~W~Cp~C~~~~~ 110 (322)
.|+.||.|..+||..|+.-.- ..+|+ -.|.|+.|.....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~ 46 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHV 46 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSC
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccccc
Confidence 378999999999999997331 34453 4799999976533
No 63
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.72 E-value=0.41 Score=36.26 Aligned_cols=49 Identities=24% Similarity=0.521 Sum_probs=34.8
Q ss_pred ccccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|...- .-+.|..|...||..|+.--|.... .=.||.|.....
T Consensus 14 ~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDYWP 63 (74)
T ss_dssp SSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSCCC
T ss_pred CCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCcCC
Confidence 345699998642 2346889999999999997665442 236999986533
No 64
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=79.18 E-value=0.85 Score=30.86 Aligned_cols=44 Identities=27% Similarity=0.579 Sum_probs=30.7
Q ss_pred cccccccccC---Cc-eeecccCCCcccccccCCCCCCCCCCCccCccCccc
Q 039387 61 YYECLICCNG---GE-LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 61 ~~~C~vC~~g---G~-Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
...|.+|... ++ ......|...||..|+...+.. ...||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 3468898763 22 3444469999999999876543 3479999754
No 65
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=76.90 E-value=0.5 Score=37.82 Aligned_cols=39 Identities=21% Similarity=0.456 Sum_probs=29.6
Q ss_pred cccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
..+|.+|++.. |+.|...||++|++++ .|.|..|...+.
T Consensus 7 C~~C~~C~~~~----C~~C~~c~~~~~~~~~-------~~~~~~c~~~~~ 45 (117)
T 4bbq_A 7 CRKCKACVQGE----CGVCHYCRDMKKFGGP-------GRMKQSCVLRQC 45 (117)
T ss_dssp CSCSHHHHSCC----CSCSHHHHHSGGGTSC-------CCSCCCCGGGCC
T ss_pred CCcCcCcCCcC----CCCCCCCcCCcccCCC-------Cccccchhheee
Confidence 34677777653 9999999999999865 478888865544
No 66
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=73.07 E-value=1.4 Score=34.27 Aligned_cols=30 Identities=23% Similarity=0.749 Sum_probs=24.0
Q ss_pred cccccccccc--CCceeecc--cCCCcccccccC
Q 039387 60 HYYECLICCN--GGELLCCD--TCPNTYHLQCLT 89 (322)
Q Consensus 60 ~~~~C~vC~~--gG~Ll~CD--~C~~~fH~~CL~ 89 (322)
....|.+|.. .|-.|.|. .|..+||..|..
T Consensus 16 ~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 16 WKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHH
T ss_pred hcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHH
Confidence 3456999985 37788887 599999999964
No 67
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=72.72 E-value=0.63 Score=33.14 Aligned_cols=48 Identities=27% Similarity=0.473 Sum_probs=32.1
Q ss_pred cccccccccc---CCceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
....|.+|.. .++.+..-.|...||..|+...+.. ...||.|+.....
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVDIEA 63 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSBSCS
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCccccC
Confidence 3456999964 3343444569999999999865433 2359999876543
No 68
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=71.56 E-value=1.3 Score=40.20 Aligned_cols=48 Identities=25% Similarity=0.538 Sum_probs=35.0
Q ss_pred cccccccccC-CceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNG-GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~g-G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|..- ..-..|..|...||..|+.--+... +.=.||.|.....
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~--~~~~CP~C~~~W~ 228 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSN--AEPRCPHCNDYWP 228 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTC--SSCBCTTTCCBCC
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhC--CCCCCCCCCCCCC
Confidence 5679999873 2347799999999999997544432 3456999976543
No 69
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=69.11 E-value=0.4 Score=34.56 Aligned_cols=48 Identities=23% Similarity=0.354 Sum_probs=31.6
Q ss_pred ccccccccccCC--ce-eec--ccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 60 HYYECLICCNGG--EL-LCC--DTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 60 ~~~~C~vC~~gG--~L-l~C--D~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
....|.+|...+ ++ .-| .+.-+.||..||...+.. .+.+.|+.|....
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVVY 57 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCBC
T ss_pred CCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCee
Confidence 456799997532 23 333 233359999999976542 2568999998654
No 70
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.97 E-value=0.81 Score=33.26 Aligned_cols=47 Identities=23% Similarity=0.583 Sum_probs=32.5
Q ss_pred cccccccccc---CCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|.. .++.+..-.|...||..|+...+.. ...||.|+..-.
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcCC
Confidence 3457999984 3444444568999999999865432 247999986543
No 71
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=68.80 E-value=4.1 Score=31.79 Aligned_cols=36 Identities=28% Similarity=0.736 Sum_probs=28.5
Q ss_pred ceeecccCC-CcccccccCCCCCCCCCCCccCccCccccC
Q 039387 72 ELLCCDTCP-NTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 72 ~Ll~CD~C~-~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
+||+|..|. .+-|..|.. |.. ....|.|..|..-..
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~--l~~-~~~~weC~~C~~v~~ 81 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSS--LRP-NSKKWECNECLPASG 81 (85)
T ss_dssp BCEECSSSCCCEECSGGGT--CCT-TCSCCCCTTTSCCSS
T ss_pred EEEeCcccCCchhHHHHhC--CcC-CCCCEECCcCccccC
Confidence 599999999 689999998 532 346899999985443
No 72
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=68.78 E-value=2.7 Score=30.44 Aligned_cols=47 Identities=30% Similarity=0.584 Sum_probs=31.5
Q ss_pred cccccccccC---CceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 61 YYECLICCNG---GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 61 ~~~C~vC~~g---G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
...|.+|... +..+.--.|...||..|+...+.. ...||.|+.....
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSLTG 64 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCCCC
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCccCC
Confidence 4569999653 333222358889999999865543 2479999876543
No 73
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=67.87 E-value=1.3 Score=33.78 Aligned_cols=46 Identities=26% Similarity=0.624 Sum_probs=32.0
Q ss_pred cccccccccc---CCceeecccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 60 HYYECLICCN---GGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 60 ~~~~C~vC~~---gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
....|.+|.. .++.+..-.|.-.||..|+...+... -.||.|+...
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~----~~CP~Cr~~~ 87 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKS----GTCPVCRCMF 87 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTT----CBCTTTCCBS
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcC----CcCcCcCccC
Confidence 4567999974 24434334599999999998765432 3799998654
No 74
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.57 E-value=1.4 Score=32.82 Aligned_cols=29 Identities=21% Similarity=0.611 Sum_probs=22.7
Q ss_pred ccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 77 DTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 77 D~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
-.|.-.||..|+..-|.... .||.|+..-
T Consensus 46 ~~C~H~FH~~Ci~~Wl~~~~----~CP~CR~~~ 74 (81)
T 2ecl_A 46 GECNHSFHNCCMSLWVKQNN----RCPLCQQDW 74 (81)
T ss_dssp ETTSCEEEHHHHHHHTTTCC----BCTTTCCBC
T ss_pred CCCCCccChHHHHHHHHhCC----CCCCcCCCc
Confidence 36999999999998766432 799998653
No 75
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=63.74 E-value=1.1 Score=35.07 Aligned_cols=35 Identities=31% Similarity=0.712 Sum_probs=24.3
Q ss_pred cccCCCcccccccCCCCCCCC-CCCccCccCccccC
Q 039387 76 CDTCPNTYHLQCLTPPLEDVP-PGSWKCPSCSELED 110 (322)
Q Consensus 76 CD~C~~~fH~~CL~PPL~~~P-~g~W~Cp~C~~~~~ 110 (322)
.-.|.-.||..|+...+.... ...-.||.|+....
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 446889999999987552211 24568999986544
No 76
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=62.84 E-value=1 Score=30.38 Aligned_cols=44 Identities=25% Similarity=0.555 Sum_probs=30.6
Q ss_pred cccccccccC----CceeecccCCCcccccccCCCCCCCCCCCccCccCccc
Q 039387 61 YYECLICCNG----GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 61 ~~~C~vC~~g----G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
...|.+|... ++.+..-.|.-.||..|+...+... ..||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 4568999763 2345566789999999998644322 579999754
No 77
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.56 E-value=2.1 Score=32.41 Aligned_cols=49 Identities=20% Similarity=0.330 Sum_probs=32.2
Q ss_pred ccccccccccC----Cceee---cccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNG----GELLC---CDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g----G~Ll~---CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|... +.++. |.+.-..||..||...|..- +...||.|.....
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~--~~~~CplCr~~~~ 69 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS--DTRCCELCKYEFI 69 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH--CCSBCSSSCCBCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC--CCCCCCCCCCeee
Confidence 34569999853 23432 22334899999999765432 3468999987654
No 78
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=58.19 E-value=2.3 Score=34.70 Aligned_cols=27 Identities=22% Similarity=0.589 Sum_probs=0.0
Q ss_pred cCCCcccccccCCCCCCCCCCCccCccCccc
Q 039387 78 TCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 78 ~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
.|.-.||..|+.+-|... -.||.|+..
T Consensus 83 ~C~H~FH~~CI~~Wl~~~----~~CP~Cr~~ 109 (117)
T 4a0k_B 83 VCNHAFHFHCISRWLKTR----QVCPLDNRE 109 (117)
T ss_dssp -------------------------------
T ss_pred CcCceEcHHHHHHHHHcC----CcCCCCCCe
Confidence 688999999999876642 369999865
No 79
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=57.61 E-value=3.8 Score=39.95 Aligned_cols=48 Identities=35% Similarity=0.751 Sum_probs=32.6
Q ss_pred ccccccccc----CCc--eeecc--cCCCcccccccCCCCCCCCCC-------CccCccCccc
Q 039387 61 YYECLICCN----GGE--LLCCD--TCPNTYHLQCLTPPLEDVPPG-------SWKCPSCSEL 108 (322)
Q Consensus 61 ~~~C~vC~~----gG~--Ll~CD--~C~~~fH~~CL~PPL~~~P~g-------~W~Cp~C~~~ 108 (322)
...|.+|-. +|. -..|+ .|...||..||...+...+.+ -=.||.|...
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 457999975 243 35688 899999999998655433321 0139999864
No 80
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.20 E-value=2 Score=30.88 Aligned_cols=47 Identities=26% Similarity=0.433 Sum_probs=30.9
Q ss_pred cccccccccC---CceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 61 YYECLICCNG---GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 61 ~~~C~vC~~g---G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
...|.+|... +..+.--.|...||..|+...+... -.||.|+.....
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~----~~CP~Cr~~~~~ 64 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR----KVCPLCNMPVLQ 64 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC----SBCTTTCCBCSS
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC----CcCCCcCccccc
Confidence 4569999864 2222222588899999998654332 279999876543
No 81
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=54.49 E-value=2.5 Score=33.68 Aligned_cols=28 Identities=21% Similarity=0.591 Sum_probs=22.5
Q ss_pred ccCCCcccccccCCCCCCCCCCCccCccCccc
Q 039387 77 DTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 77 D~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
-.|.-.||..|+.+-|.. .-.||.|+..
T Consensus 71 ~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 71 GVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp ETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred cccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 469999999999986654 3479999875
No 82
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.35 E-value=4.7 Score=28.78 Aligned_cols=45 Identities=18% Similarity=0.389 Sum_probs=30.4
Q ss_pred ccccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 60 HYYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 60 ~~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
....|.+|...- +.+.. .|.-.||..|+...+.. ...||.|+...
T Consensus 14 ~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 59 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSL-PCKHVFCYLCVKGASWL----GKRCALCRQEI 59 (71)
T ss_dssp SCCBCSSSSSBCSSEEEE-TTTEEEEHHHHHHCTTC----SSBCSSSCCBC
T ss_pred CCCCCccCCcccCCCEEc-cCCCHHHHHHHHHHHHC----CCcCcCcCchh
Confidence 345699998642 22222 58888999999865443 25899998654
No 83
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=51.69 E-value=16 Score=25.01 Aligned_cols=44 Identities=20% Similarity=0.453 Sum_probs=28.1
Q ss_pred ccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|...-.-..--.|.-.|+..|+.. ..-.||.|+....
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~-------~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA-------SGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS-------SSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHcc-------CCCCCCcCCcEee
Confidence 3456999986422111225777888888874 2457999987544
No 84
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=49.84 E-value=11 Score=29.10 Aligned_cols=19 Identities=32% Similarity=1.111 Sum_probs=13.5
Q ss_pred CCCCCCCCCccCccCccccC
Q 039387 91 PLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 91 PL~~~P~g~W~Cp~C~~~~~ 110 (322)
+...+| .+|.||.|-..+.
T Consensus 53 ~fedlP-ddW~CPvCga~K~ 71 (81)
T 2kn9_A 53 RWDDIP-DDWSCPDCGAAKS 71 (81)
T ss_dssp CTTTSC-TTCCCTTTCCCGG
T ss_pred ChhHCC-CCCcCCCCCCCHH
Confidence 345565 5899999987544
No 85
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=49.37 E-value=2.4 Score=35.54 Aligned_cols=48 Identities=21% Similarity=0.562 Sum_probs=34.3
Q ss_pred ccccccccccC-CceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNG-GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g-G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|... .+-+.+..|...||..|+...+. .+...||.|...-.
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALR---SGNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH---TTCCBCTTTCCBCC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH---hCcCCCCCCCCcCC
Confidence 34579999874 33445568999999999986544 23567999987643
No 86
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=49.19 E-value=6.3 Score=25.15 Aligned_cols=15 Identities=27% Similarity=0.928 Sum_probs=11.4
Q ss_pred CCCCccCccCccccC
Q 039387 96 PPGSWKCPSCSELED 110 (322)
Q Consensus 96 P~g~W~Cp~C~~~~~ 110 (322)
..|||.|+.|.....
T Consensus 3 ~~gDW~C~~C~~~Nf 17 (33)
T 2k1p_A 3 SANDWQCKTCSNVNW 17 (33)
T ss_dssp SSSSCBCSSSCCBCC
T ss_pred CCCCcccCCCCCccc
Confidence 358999999976544
No 87
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=48.19 E-value=3.1 Score=32.12 Aligned_cols=48 Identities=21% Similarity=0.617 Sum_probs=35.1
Q ss_pred ccccccccccC-CceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNG-GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g-G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|... .+-+.|-.|+-.||..|+...+... ...||.|+....
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~---~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ---RAQCPHCRAPLQ 69 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHT---CSBCTTTCCBCC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHC---cCCCCCCCCcCC
Confidence 34679999874 3456678999999999998654332 158999987654
No 88
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=47.17 E-value=4.8 Score=25.53 Aligned_cols=14 Identities=21% Similarity=0.498 Sum_probs=10.5
Q ss_pred CCCccCccCccccC
Q 039387 97 PGSWKCPSCSELED 110 (322)
Q Consensus 97 ~g~W~Cp~C~~~~~ 110 (322)
.|+|.|+.|.....
T Consensus 3 ~gDW~C~~C~~~Nf 16 (32)
T 2lk0_A 3 FEDWLCNKCCLNNF 16 (32)
T ss_dssp CSEEECTTTCCEEE
T ss_pred CCCCCcCcCcCCcC
Confidence 48999999965433
No 89
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=46.66 E-value=7.8 Score=30.22 Aligned_cols=46 Identities=24% Similarity=0.462 Sum_probs=32.6
Q ss_pred ccccccccccCC--ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGG--ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
.+..|.+|...- ...+ .|.-.|+..|+...+. .+...||.|.....
T Consensus 14 ~~~~C~iC~~~~~~p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 14 SECQCGICMEILVEPVTL--PCNHTLCKPCFQSTVE---KASLCCPFCRRRVS 61 (115)
T ss_dssp HHHBCTTTCSBCSSCEEC--TTSCEECHHHHCCCCC---TTTSBCTTTCCBCH
T ss_pred CCCCCccCCcccCceeEc--CCCCHHhHHHHHHHHh---HCcCCCCCCCcccC
Confidence 356799998642 2222 7999999999986554 34578999987543
No 90
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.32 E-value=7.1 Score=27.62 Aligned_cols=49 Identities=27% Similarity=0.516 Sum_probs=32.8
Q ss_pred ccccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|...- +-+.. .|.-.||..|+...+.. ..+.-.||.|.....
T Consensus 19 ~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTI-DCGHNFCLKCITQIGET-SCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHHHCSS-SCSCCCCSSSCCCCC
T ss_pred cCCEeccCCcccCCeEEc-CCCChhhHHHHHHHHHc-CCCCCCCCCCCCcCC
Confidence 345799998742 22222 79999999999865542 234568999987544
No 91
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.51 E-value=5 Score=28.15 Aligned_cols=45 Identities=24% Similarity=0.441 Sum_probs=31.1
Q ss_pred cccccccccCC--ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGG--ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...- ..+ -.|...||..|+...+. .+...||.|.....
T Consensus 15 ~~~C~IC~~~~~~p~~--~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPKQ--TECGHRFCESCMAALLS---SSSPKCTACQESIV 61 (66)
T ss_dssp CEECTTTCCEESSCCC--CSSSCCCCHHHHHHHHT---TSSCCCTTTCCCCC
T ss_pred CCCCCCCChHhcCeeE--CCCCCHHHHHHHHHHHH---hCcCCCCCCCcCCC
Confidence 45699998642 122 37899999999986553 34567999987543
No 92
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=45.45 E-value=14 Score=26.29 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=32.3
Q ss_pred cccccccccCC--ceeecccCCCcccccccCCCCCCC---CCCCccCccCccccC
Q 039387 61 YYECLICCNGG--ELLCCDTCPNTYHLQCLTPPLEDV---PPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PPL~~~---P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...- ..+ -.|.-.|+..|+...+... ..+.-.||.|.....
T Consensus 12 ~~~C~IC~~~~~~p~~--l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 12 EVTCPICLELLTEPLS--LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCEETTTTEECSSCCC--CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred CCCCcCCCcccCCeeE--CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 45699998632 222 2689999999998765432 123678999987654
No 93
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.14 E-value=2.8 Score=29.68 Aligned_cols=45 Identities=22% Similarity=0.503 Sum_probs=31.2
Q ss_pred cccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...-.- .--.|.-.||..|+...+. ....||.|+....
T Consensus 15 ~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 15 EEECCICMDGRAD-LILPCAHSFCQKCIDKWSD----RHRNCPICRLQMT 59 (70)
T ss_dssp CCCCSSSCCSCCS-EEETTTEEECHHHHHHSSC----CCSSCHHHHHCTT
T ss_pred CCCCeeCCcCccC-cccCCCCcccHHHHHHHHH----CcCcCCCcCCccc
Confidence 4569999875322 3346888899999987554 3568999976544
No 94
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=44.69 E-value=2.8 Score=29.55 Aligned_cols=47 Identities=30% Similarity=0.760 Sum_probs=32.8
Q ss_pred ccccccccccC-------CceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNG-------GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g-------G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|... ++.+..-.|.-.||..|+..-+... -.||.|+..-.
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~~~ 62 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKKIN 62 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC----SBCTTTCCBCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC----CCCCCCCCccC
Confidence 34569999753 3445666899999999998644322 37999987544
No 95
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=44.67 E-value=22 Score=24.92 Aligned_cols=18 Identities=44% Similarity=1.256 Sum_probs=12.7
Q ss_pred CCCCCCCCccCccCccccC
Q 039387 92 LEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 92 L~~~P~g~W~Cp~C~~~~~ 110 (322)
...+| .+|.||.|...+.
T Consensus 30 f~~lP-~dw~CP~Cg~~K~ 47 (52)
T 1e8j_A 30 FEDLP-DDWACPVCGASKD 47 (52)
T ss_dssp TTSSC-TTCCCSSSCCCTT
T ss_pred hHHCC-CCCcCCCCCCcHH
Confidence 44555 5899999987543
No 96
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.57 E-value=8.2 Score=25.89 Aligned_cols=42 Identities=24% Similarity=0.600 Sum_probs=27.5
Q ss_pred cccccccccCC--ceeecccCCCcccccccCCCCCCCCCCCccCccC
Q 039387 61 YYECLICCNGG--ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105 (322)
Q Consensus 61 ~~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C 105 (322)
...|.+|...- ..+ -.|.-.||..|+...+... .+.-.||.|
T Consensus 15 ~~~C~IC~~~~~~p~~--~~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 15 EASCSVCLEYLKEPVI--IECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp CCBCSSSCCBCSSCCC--CSSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred CCCCccCCcccCccEe--CCCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 45699998642 122 2688889999998654432 245678877
No 97
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=44.45 E-value=4.1 Score=33.16 Aligned_cols=45 Identities=20% Similarity=0.530 Sum_probs=30.0
Q ss_pred cccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
+..|.+|...- +.+. -.|+..||..|+...+.. .-.||.|+....
T Consensus 53 ~~~C~iC~~~~~~~~~-~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVT-LNCAHSFCSYCINEWMKR----KIECPICRKDIK 98 (138)
T ss_dssp HSBCTTTCSBCSSEEE-ETTSCEEEHHHHHHHTTT----CSBCTTTCCBCC
T ss_pred cCCCcccCcccCCceE-CCCCCCccHHHHHHHHHc----CCcCCCCCCcCC
Confidence 34699998742 2222 258889999998865443 246999986543
No 98
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=43.73 E-value=4.7 Score=25.96 Aligned_cols=15 Identities=27% Similarity=0.767 Sum_probs=12.1
Q ss_pred CCCCccCccCccccC
Q 039387 96 PPGSWKCPSCSELED 110 (322)
Q Consensus 96 P~g~W~Cp~C~~~~~ 110 (322)
-+|+|.|..|..++.
T Consensus 15 regdwcchkcvpegk 29 (36)
T 4b2u_A 15 REGDWCCHKCVPEGK 29 (36)
T ss_dssp GGCCSSSSEEEEETT
T ss_pred CccCeeeecccccCc
Confidence 368999999987654
No 99
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=40.12 E-value=3.1 Score=28.58 Aligned_cols=46 Identities=30% Similarity=0.806 Sum_probs=31.4
Q ss_pred cccccccccC-------CceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNG-------GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~g-------G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|... ++.+..-.|.-.||..|+...+.. .-.||.|+..-.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKIN 55 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH----CSBCTTTCCBCT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc----CCCCCCCCccCC
Confidence 3468888753 234455689999999999864432 347999986544
No 100
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=40.00 E-value=3.7 Score=28.81 Aligned_cols=46 Identities=20% Similarity=0.451 Sum_probs=30.9
Q ss_pred cccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...- +-...-.|.-.||..|+...+.. ...||.|+....
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQ----NPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHH----SCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhC----cCcCcCCChhhH
Confidence 35699998753 22344568888999999754322 247999986544
No 101
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=39.71 E-value=16 Score=27.28 Aligned_cols=18 Identities=28% Similarity=0.820 Sum_probs=12.8
Q ss_pred CCCCCCCCccCccCccccC
Q 039387 92 LEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 92 L~~~P~g~W~Cp~C~~~~~ 110 (322)
...+| .+|.||.|...+.
T Consensus 34 f~~lP-ddw~CP~Cga~K~ 51 (70)
T 1dx8_A 34 FVDLS-DSFMCPACRSPKN 51 (70)
T ss_dssp GGGSC-TTCBCTTTCCBGG
T ss_pred hhhCC-CCCcCCCCCCCHH
Confidence 34455 5899999987544
No 102
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=39.11 E-value=15 Score=26.04 Aligned_cols=17 Identities=41% Similarity=1.079 Sum_probs=12.2
Q ss_pred CCCCCCCccCccCccccC
Q 039387 93 EDVPPGSWKCPSCSELED 110 (322)
Q Consensus 93 ~~~P~g~W~Cp~C~~~~~ 110 (322)
..+| .+|.||.|...+.
T Consensus 31 ~~lP-~dw~CP~Cga~K~ 47 (55)
T 2v3b_B 31 EDIP-ADWVCPDCGVGKI 47 (55)
T ss_dssp GGSC-TTCCCTTTCCCGG
T ss_pred hHCC-CCCcCCCCCCCHH
Confidence 3454 5899999987543
No 103
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=37.90 E-value=14 Score=28.96 Aligned_cols=19 Identities=37% Similarity=1.160 Sum_probs=13.2
Q ss_pred CCCCCCCCCccCccCccccC
Q 039387 91 PLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 91 PL~~~P~g~W~Cp~C~~~~~ 110 (322)
+...+| .+|.||.|-..+.
T Consensus 61 ~fedlP-ddW~CPvCga~K~ 79 (87)
T 1s24_A 61 RFEDIP-DDWCCPDCGATKE 79 (87)
T ss_dssp CGGGCC-TTCCCSSSCCCGG
T ss_pred ChhHCC-CCCCCCCCCCCHH
Confidence 344555 5899999987543
No 104
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=37.71 E-value=5.8 Score=28.65 Aligned_cols=47 Identities=26% Similarity=0.605 Sum_probs=31.7
Q ss_pred ccccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccc
Q 039387 60 HYYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 60 ~~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
....|.+|...- +-+.-..|...||..|+...+... +.-.||.|+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~--~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES--DEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHS--SSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhc--CCCcCCCCCCc
Confidence 456799998642 223333489999999998655421 34579999875
No 105
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=37.67 E-value=4.3 Score=32.22 Aligned_cols=47 Identities=17% Similarity=0.497 Sum_probs=32.3
Q ss_pred ccccccccccCC--ceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCNGG--ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
....|.+|...= .+.+ .|+..||..|+...+. .+...||.|+.....
T Consensus 51 ~~~~C~IC~~~~~~p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITT--VCQHNVCKDCLDRSFR---AQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSEEEC--TTSCEEEHHHHHHHHH---TTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCcEEe--eCCCcccHHHHHHHHh---HCcCCCCCCCccCCC
Confidence 345799998742 2222 7999999999976543 234589999876553
No 106
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=37.59 E-value=5.6 Score=28.71 Aligned_cols=49 Identities=24% Similarity=0.472 Sum_probs=31.5
Q ss_pred cccccccccCC-ceeecccCCCcccccccCCCCCCC--CCCCccCccCccccC
Q 039387 61 YYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDV--PPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~--P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...- +-+. -.|...||..|+..-+... ..+...||.|.....
T Consensus 19 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 19 EVTCPICLELLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTSCTTTCSCCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred CCCCcCCChhhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 45799998742 2222 2588889999987533321 124678999987644
No 107
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=37.46 E-value=17 Score=25.47 Aligned_cols=16 Identities=44% Similarity=1.219 Sum_probs=11.7
Q ss_pred CCCCCCCccCccCcccc
Q 039387 93 EDVPPGSWKCPSCSELE 109 (322)
Q Consensus 93 ~~~P~g~W~Cp~C~~~~ 109 (322)
..+| .+|.||.|...+
T Consensus 30 ~~lP-~dw~CP~Cg~~K 45 (52)
T 1yk4_A 30 EDLP-DDWVCPLCGAPK 45 (52)
T ss_dssp GGSC-TTCBCTTTCCBG
T ss_pred hHCC-CCCcCCCCCCCH
Confidence 3454 589999998754
No 108
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.57 E-value=7.6 Score=27.70 Aligned_cols=48 Identities=23% Similarity=0.475 Sum_probs=32.6
Q ss_pred ccccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
....|.+|...- +-+.-..|...||..|+...+.. .-.||.|+..-..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY----SNRCPKCNIVVHQ 62 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH----CSSCTTTCCCCCS
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc----CCcCCCcCcccCc
Confidence 356799998743 33334578999999999754432 2469999876543
No 109
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.44 E-value=5.4 Score=29.22 Aligned_cols=49 Identities=31% Similarity=0.497 Sum_probs=31.7
Q ss_pred cccccccccCC-c---eeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGG-E---LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG-~---Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...- + ...--.|.-.||..|+...+... .+...||.|+....
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS-INGVRCPFCSKITR 67 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC-SSCBCCTTTCCCBC
T ss_pred CCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC-CCCcCCCCCCCccc
Confidence 45699998642 1 02222699999999998644322 23568999987544
No 110
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.34 E-value=5.2 Score=29.22 Aligned_cols=45 Identities=16% Similarity=0.471 Sum_probs=30.7
Q ss_pred cccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...- +-+. -.|...||..|+...+.. ...||.|.....
T Consensus 15 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~ 60 (81)
T 2csy_A 15 PFRCFICRQAFQNPVV-TKCRHYFCESCALEHFRA----TPRCYICDQPTG 60 (81)
T ss_dssp CSBCSSSCSBCCSEEE-CTTSCEEEHHHHHHHHHH----CSBCSSSCCBCC
T ss_pred CCCCcCCCchhcCeeE-ccCCCHhHHHHHHHHHHC----CCcCCCcCcccc
Confidence 45799998642 2222 478999999999764432 347999987654
No 111
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=34.95 E-value=6.4 Score=30.24 Aligned_cols=49 Identities=22% Similarity=0.453 Sum_probs=31.6
Q ss_pred cccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 61 YYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...-.-..--.|+..||..|+...+... .+...||.|.....
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQK-KGPSQCPLCKNDIT 69 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSS-SSSCCCTTTSCCCC
T ss_pred CCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhC-CCCCCCcCCCCcCC
Confidence 45699998642111112699999999987544322 34578999987544
No 112
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.26 E-value=2.7 Score=29.34 Aligned_cols=45 Identities=31% Similarity=0.795 Sum_probs=31.0
Q ss_pred cccccccccC-------CceeecccCCCcccccccCCCCCCCCCCCccCccCcccc
Q 039387 61 YYECLICCNG-------GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 61 ~~~C~vC~~g-------G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~ 109 (322)
...|.+|... +..+.--.|.-.||..|+...+.. .-.||.|+...
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~ 66 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKI 66 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH----CSSCTTTCCCC
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc----CCCCCCCCCcc
Confidence 4569999763 334455688999999999864432 23699998643
No 113
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=33.70 E-value=23 Score=27.68 Aligned_cols=45 Identities=22% Similarity=0.508 Sum_probs=30.3
Q ss_pred ccccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|...- +-+.-..|+-.|+..|+...+. -.||.|.....
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~------~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG------TGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT------TBCSSSCCBCS
T ss_pred hCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc------CCCcCCCCcCc
Confidence 345799998743 2222226888899999986543 46999987653
No 114
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=33.56 E-value=5 Score=31.38 Aligned_cols=47 Identities=30% Similarity=0.767 Sum_probs=34.1
Q ss_pred ccccccccccC-------CceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNG-------GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~g-------G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|... +..+..-.|+-.||..|+...+.. ...||.|+..-.
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKIN 124 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH----CSBCTTTCCBCC
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHc----CCCCCCCCCcCC
Confidence 45679999753 334466689999999999976643 248999986544
No 115
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=30.76 E-value=11 Score=29.08 Aligned_cols=48 Identities=21% Similarity=0.398 Sum_probs=33.5
Q ss_pred ccccccccccC-CceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 60 HYYECLICCNG-GELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 60 ~~~~C~vC~~g-G~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
....|.+|... .+-+....|+-.||..|+...+.. .-.||.|......
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET----SKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS----CSBCTTTCCBSCS
T ss_pred CcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh----CCcCcCCCccccc
Confidence 35679999874 233444589999999999765443 2579999876554
No 116
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.74 E-value=6.7 Score=27.13 Aligned_cols=43 Identities=30% Similarity=0.619 Sum_probs=27.8
Q ss_pred ccccccccccCC--ceeecccCCCcccccccCCCCCCCCCCCccCccC
Q 039387 60 HYYECLICCNGG--ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSC 105 (322)
Q Consensus 60 ~~~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C 105 (322)
....|.+|...- ..++ .|.-.||..|+...+.. ..+.-.||.|
T Consensus 19 ~~~~C~IC~~~~~~p~~~--~CgH~fC~~Ci~~~~~~-~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKPVTI--DCGHNFCLKCITQIGET-SCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSCEEC--TTSSEECHHHHHHHHHH-CSSCCCCSCC
T ss_pred cCCCCCcCCchhCCeEEe--CCCCcchHHHHHHHHHc-CCCCCcCcCC
Confidence 345799998642 2332 79989999999764432 1234568877
No 117
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=30.72 E-value=27 Score=23.97 Aligned_cols=17 Identities=29% Similarity=1.062 Sum_probs=12.1
Q ss_pred CCCCCCCCccCccCcccc
Q 039387 92 LEDVPPGSWKCPSCSELE 109 (322)
Q Consensus 92 L~~~P~g~W~Cp~C~~~~ 109 (322)
...+| .+|.||.|-..+
T Consensus 24 f~~lP-~dw~CP~Cg~~k 40 (46)
T 6rxn_A 24 FDQLP-DDWCCPVCGVSK 40 (46)
T ss_dssp GGGSC-TTCBCTTTCCBG
T ss_pred hhhCC-CCCcCcCCCCcH
Confidence 44555 579999998653
No 118
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=30.61 E-value=10 Score=27.30 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=32.1
Q ss_pred ccccccccccCC--ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGG--ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|...= .++. .|+..|+..|+...+. .+.-.||.|...-.
T Consensus 7 ~~~~C~IC~~~~~~Pv~~--~CgH~fc~~Ci~~~~~---~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIV--STGQTYERSSIQKWLD---AGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSEEEE--TTTEEEEHHHHHHHHT---TTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCCEEc--CCCCeecHHHHHHHHH---HCcCCCCCCcCCCC
Confidence 356799998742 2332 6999999999976554 24578999987544
No 119
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=29.76 E-value=23 Score=26.24 Aligned_cols=47 Identities=23% Similarity=0.453 Sum_probs=30.8
Q ss_pred cccccccccCC---c--eeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 61 YYECLICCNGG---E--LLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 61 ~~~C~vC~~gG---~--Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
+..|.+|...- + ++-| .|+-.|+..|+.--+.. +...||.|+.....
T Consensus 11 ~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~~---~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRTD---ENGLCPACRKPYPE 62 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTTS---SCSBCTTTCCBCSS
T ss_pred CCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHhc---CCCCCCCCCCccCC
Confidence 45699998732 1 1112 48888999998744332 46789999876553
No 120
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=29.10 E-value=22 Score=26.55 Aligned_cols=33 Identities=27% Similarity=0.603 Sum_probs=22.7
Q ss_pred ccccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
...+|.+|.... .|-|.+| +|+-||..|..+..
T Consensus 7 e~pWC~ICneDA-tlrC~gC-----------------dgDLYC~rC~rE~H 39 (67)
T 2d8v_A 7 GLPWCCICNEDA-TLRCAGC-----------------DGDLYCARCFREGH 39 (67)
T ss_dssp CCSSCTTTCSCC-CEEETTT-----------------TSEEECSSHHHHHT
T ss_pred CCCeeEEeCCCC-eEEecCC-----------------CCceehHHHHHHHc
Confidence 345788888764 3567777 35678888876655
No 121
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.92 E-value=9.7 Score=27.37 Aligned_cols=49 Identities=24% Similarity=0.474 Sum_probs=31.1
Q ss_pred cccccccccCC-ceeecccCCCcccccccCCCCCC--CCCCCccCccCccccC
Q 039387 61 YYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLED--VPPGSWKCPSCSELED 110 (322)
Q Consensus 61 ~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~--~P~g~W~Cp~C~~~~~ 110 (322)
...|.+|...- +.+. -.|...||..|+...+.. ...+.-.||.|.....
T Consensus 19 ~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 19 EVTCPICLELLTQPLS-LDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCTTTCSCCSSCBC-CSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCcccCCcee-CCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 45699998742 2111 268888999998753322 1123568999987654
No 122
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=26.26 E-value=11 Score=28.48 Aligned_cols=47 Identities=21% Similarity=0.448 Sum_probs=32.3
Q ss_pred ccccccccccCC-ceeecccCCCcccccccCCCCCCCCCCCccCccCccccC
Q 039387 60 HYYECLICCNGG-ELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELED 110 (322)
Q Consensus 60 ~~~~C~vC~~gG-~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~ 110 (322)
....|.+|...- +-+..-.|+..||..|+...+.. .-.||.|.....
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~ 68 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY----KTQCPTCCVTVT 68 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT----CCBCTTTCCBCC
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHC----CCCCCCCCCcCC
Confidence 346799998752 33333479999999999765442 247999987544
No 123
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=26.17 E-value=28 Score=24.70 Aligned_cols=17 Identities=41% Similarity=1.140 Sum_probs=12.2
Q ss_pred CCCCCCCccCccCccccC
Q 039387 93 EDVPPGSWKCPSCSELED 110 (322)
Q Consensus 93 ~~~P~g~W~Cp~C~~~~~ 110 (322)
..+| .+|.||.|-..+.
T Consensus 31 e~lP-~dw~CP~Cg~~K~ 47 (54)
T 4rxn_A 31 KDIP-DDWVCPLCGVGKD 47 (54)
T ss_dssp GGSC-TTCBCTTTCCBGG
T ss_pred hHCC-CCCcCcCCCCcHH
Confidence 3454 5899999987543
No 124
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=25.50 E-value=25 Score=26.97 Aligned_cols=30 Identities=30% Similarity=0.648 Sum_probs=24.5
Q ss_pred ccccccccCC--ceeecccCCCcccccccCCC
Q 039387 62 YECLICCNGG--ELLCCDTCPNTYHLQCLTPP 91 (322)
Q Consensus 62 ~~C~vC~~gG--~Ll~CD~C~~~fH~~CL~PP 91 (322)
..|.+|+..+ -.-.|..|+-..|+.|...|
T Consensus 48 ~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEEGTIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCCCSCEEECTTTCCCCCHHHHHCS
T ss_pred eEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCC
Confidence 5799998754 46779999999999998754
No 125
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=23.87 E-value=11 Score=31.48 Aligned_cols=48 Identities=17% Similarity=0.400 Sum_probs=31.9
Q ss_pred cccccccccCCceeecccCCCcccccccCCCCCCCCCCCccCccCccccCC
Q 039387 61 YYECLICCNGGELLCCDTCPNTYHLQCLTPPLEDVPPGSWKCPSCSELEDL 111 (322)
Q Consensus 61 ~~~C~vC~~gG~Ll~CD~C~~~fH~~CL~PPL~~~P~g~W~Cp~C~~~~~~ 111 (322)
...|.+|...-.-..--.|.-.|+..|+...+.. +...||.|......
T Consensus 78 ~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKA---QVFSCPACRHDLGQ 125 (150)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHT---TCCBCTTTCCBCCT
T ss_pred CCEeecCChhhcCCEEcCCCCchhHHHHHHHHHh---CCCcCCCCCccCCC
Confidence 4579999874221111378889999999765442 34579999876554
No 126
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=23.34 E-value=28 Score=21.85 Aligned_cols=19 Identities=32% Similarity=0.807 Sum_probs=13.1
Q ss_pred cccCCCCCCCCCCCccCccCccc
Q 039387 86 QCLTPPLEDVPPGSWKCPSCSEL 108 (322)
Q Consensus 86 ~CL~PPL~~~P~g~W~Cp~C~~~ 108 (322)
+|.+|- .-|+|.|-.|...
T Consensus 9 fcpdpe----kmgdwccgrcirn 27 (32)
T 4b2v_A 9 FCPDPE----KMGDWCCGRCIRN 27 (32)
T ss_dssp BCCCTT----TTCCCCSSEEETT
T ss_pred cCCChH----HhcchhhhHHHHh
Confidence 566653 2389999999753
No 127
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=22.87 E-value=27 Score=23.74 Aligned_cols=16 Identities=38% Similarity=1.093 Sum_probs=11.5
Q ss_pred CCCCCccCc--cCccccC
Q 039387 95 VPPGSWKCP--SCSELED 110 (322)
Q Consensus 95 ~P~g~W~Cp--~C~~~~~ 110 (322)
.-.|||.|+ .|.....
T Consensus 10 ~~~GDW~C~~~~C~~~Nf 27 (45)
T 1n0z_A 10 VSDGDWICPDKKCGNVNF 27 (45)
T ss_dssp SCSSSCBCSSTTTCCBCC
T ss_pred CCCCCcCCCCCCCCCEEc
Confidence 345899999 7865544
Done!