BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039392
(285 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 144/284 (50%), Gaps = 19/284 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNI 58
FS N++GRGGFG V+K RL DG VAVK Q G + F E EM+ HRN+
Sbjct: 40 FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRNL 97
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASTLEYLHF 115
+++ C + LV YM +GS+ L S LD +R I + A L YLH
Sbjct: 98 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 157
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
++IH D+K +N+LLD+ A + DFG+AKL+ +D + TIG++APEY
Sbjct: 158 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGTIGHIAPEYLS 216
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIF---NGEMTLKHWVNDWLPISTKE-IVDPN 231
G+ S DV+ +G+ML+E T ++ D + ++ L WV L E +VD
Sbjct: 217 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV- 275
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
D+ K++ V + VA+ CT SP +R E+V L
Sbjct: 276 -----DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 142/284 (50%), Gaps = 19/284 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNI 58
F N++GRGGFG V+K RL DG VAVK Q G + F E EM+ HRN+
Sbjct: 32 FXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL--QFQTEVEMISMAVHRNL 89
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASTLEYLHF 115
+++ C + LV YM +GS+ L S LD +R I + A L YLH
Sbjct: 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
++IH D+K +N+LLD+ A + DFG+AKL+ +D + IG++APEY
Sbjct: 150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGXIGHIAPEYLS 208
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIF---NGEMTLKHWVNDWLPISTKE-IVDPN 231
G+ S DV+ +G+ML+E T ++ D + ++ L WV L E +VD
Sbjct: 209 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV- 267
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
D+ K++ V + VA+ CT SP +R E+V L
Sbjct: 268 -----DLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 143/279 (51%), Gaps = 14/279 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
F LIG G FG V+K L DG +VA+K + + + F+ E E + H +++ +
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---LDIYQRLNIMIDVASTLEYLHFGYS 118
I C L+ +YM +G+L+++L+ S+ + QRL I I A L YLH +
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---T 157
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+IH D+K N+LLD+N V ++DFGI+K T D + + T+GY+ PEY +GR
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 179 VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT-LKHW-VNDWLPISTKEIVDPNLLSRE 236
++ DVYSFG++L E + + EM L W V ++IVDPNL +
Sbjct: 218 LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK- 276
Query: 237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
+ + + + A++C S E R + +++ KL
Sbjct: 277 -----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 142/279 (50%), Gaps = 14/279 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
F LIG G FG V+K L DG +VA+K + + + F+ E E + H +++ +
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL 100
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---LDIYQRLNIMIDVASTLEYLHFGYS 118
I C L+ +YM +G+L+++L+ S+ + QRL I I A L YLH +
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---T 157
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+IH D+K N+LLD+N V ++DFGI+K T + + T+GY+ PEY +GR
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 179 VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT-LKHW-VNDWLPISTKEIVDPNLLSRE 236
++ DVYSFG++L E + + EM L W V ++IVDPNL +
Sbjct: 218 LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK- 276
Query: 237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
+ + + + A++C S E R + +++ KL
Sbjct: 277 -----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 126/289 (43%), Gaps = 51/289 (17%)
Query: 8 IGRGGFGSVFKARL------GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+G G FG VF A D M VAVK K F E E++ ++ H +I+K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYI-------------LDIYQRLNIMIDV 106
C + + +V EYM HG L K+L H + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 107 ASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATI 166
AS + YL S +H DL N L+ N++ + DFG+++ + D + T+ I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 167 GYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE 226
+M PE + + DV+SFG++L E FT K W +S E
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK----------------QPWFQLSNTE 243
Query: 227 IVD----PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEI 271
+++ +L R + C V++V + C P+QR+N KEI
Sbjct: 244 VIECITQGRVLERPRV-------CPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 130/286 (45%), Gaps = 45/286 (15%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
++GRG FG V KA+ +VA+K + R K+F VE + ++H NI+K+ +C
Sbjct: 15 VVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM---IDVASTLEYLHFGYSAQVIH 123
N LV+EY GSL LH + L Y + M + + + YLH +IH
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 124 CDLKPSNVLL-DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSAN 182
DLKP N+LL V + DFG A DI T T + +MAPE + S
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 183 GDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWV--NDWLPISTKEIVDP--NLLSREDI 238
DV+S+GI+L E TR+KP DEI G W N P K + P +L++R
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEI-GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR--- 239
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLR 284
C + P QR + +EI VKI L+R
Sbjct: 240 ------------------CWSKDPSQRPSMEEI----VKIMTHLMR 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 130/286 (45%), Gaps = 45/286 (15%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
++GRG FG V KA+ +VA+K + R K+F VE + ++H NI+K+ +C
Sbjct: 16 VVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM---IDVASTLEYLHFGYSAQVIH 123
N LV+EY GSL LH + L Y + M + + + YLH +IH
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 124 CDLKPSNVLL-DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSAN 182
DLKP N+LL V + DFG A DI T T + +MAPE + S
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 183 GDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWV--NDWLPISTKEIVDP--NLLSREDI 238
DV+S+GI+L E TR+KP DEI G W N P K + P +L++R
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEI-GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR--- 240
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLR 284
C + P QR + +EI VKI L+R
Sbjct: 241 ------------------CWSKDPSQRPSMEEI----VKIMTHLMR 264
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 245
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 246 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 140
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 201 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 251
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 252 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 248
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 249 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 133
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 194 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 244
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 245 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 139
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 200 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 250
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 251 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 138
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 199 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 249
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 250 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL + +D + L + +EYL + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 248
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 249 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 245
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 246 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 165
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 226 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 276
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD +
Sbjct: 277 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 263
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 264 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 141
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 202 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 252
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 253 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 132
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 193 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 243
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD +
Sbjct: 244 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 263
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 264 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 245
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 246 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++E++P+GSL +YL +D + L + +EYL + +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH DL N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 248
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 249 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 6 NLIGRGGFGSVFKARLGDGMEVAVK----VFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
N +G GGFG V+K + + VAVK + ++ + + FD E ++M H N++++
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S+ + LV YMP+GSL L L + R I A+ + +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
IH D+K +N+LLD+ A +SDFG+A+ + + + ++ + T YMAPE G +
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEI 211
Query: 180 SANGDVYSFGIMLIETFTRKKPTDE 204
+ D+YSFG++L+E T DE
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 6 NLIGRGGFGSVFKARLGDGMEVAVK----VFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
N +G GGFG V+K + + VAVK + ++ + + FD E ++M H N++++
Sbjct: 37 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S+ + LV YMP+GSL L L + R I A+ + +LH +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
IH D+K +N+LLD+ A +SDFG+A+ + + + + + T YMAPE G +
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEI 211
Query: 180 SANGDVYSFGIMLIETFTRKKPTDE 204
+ D+YSFG++L+E T DE
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G FG+V +A G +VAVK+ Q + F E +MK + H NI+ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ ++V EY+ GSL + LH S LD +RL++ DVA + YLH + ++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+L+D + DFG+++L + + T +MAPE ++ +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 184 DVYSFGIMLIETFTRKKP 201
DVYSFG++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKVISSC 65
IGRG FG VF RL D VAVK K+ F E ++K H NI+++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
+ ++ +V+E + G +L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT----LATIGYMAPEYGKEGRVSA 181
L N L+ + V +SDFG ++RE+ + + + + APE GR S+
Sbjct: 239 LAARNCLVTEKNVLKISDFG----MSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 182 NGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+SFGI+L ETF+ P + N + T+E V+ +
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQ--------------TREFVE------KGGRL 334
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIR 279
E C VF + +C P QR + I +L IR
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G FG+V +A G +VAVK+ Q + F E +MK + H NI+ + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ ++V EY+ GSL + LH S LD +RL++ DVA + YLH + ++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
+LK N+L+D + DFG+++L +S+ T +MAPE ++ +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 184 DVYSFGIMLIETFTRKKP 201
DVYSFG++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 139/295 (47%), Gaps = 39/295 (13%)
Query: 8 IGRGGFGSVFKAR---LGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+G FGSV R L D G VAVK + F+ E E++KS+ H NI+K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 63 SSCSNEEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
C + + L++EY+P+GSL YL +D + L + +EYL + +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 135
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGRV 179
IH +L N+L+++ + DFG+ K+L ++ + ++ + I + APE E +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 180 SANGDVYSFGIMLIETFT----RKKPTDEIF-------NGEMTLKHWVNDWLPISTKEIV 228
S DV+SFG++L E FT K P E G+M + H + E++
Sbjct: 196 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI---------ELL 246
Query: 229 DPN-LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
N L R D C ++ + EC + QR + +++ ++ +IRD++
Sbjct: 247 KNNGRLPRPD-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKVISSC 65
IGRG FG VF RL D VAVK K+ F E ++K H NI+++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
+ ++ +V+E + G +L + L + L ++ D A+ +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT----LATIGYMAPEYGKEGRVSA 181
L N L+ + V +SDFG ++RE+ + + + + APE GR S+
Sbjct: 239 LAARNCLVTEKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 182 NGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+SFGI+L ETF+ P + N + T+E V+ +
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQ--------------TREFVE------KGGRL 334
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIR 279
E C VF + +C P QR + I +L IR
Sbjct: 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 11/205 (5%)
Query: 6 NLIGRGGFGSVFKARLGDGMEVAVK----VFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
N +G GGFG V+K + + VAVK + ++ + + FD E ++M H N++++
Sbjct: 31 NKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S+ + LV YMP+GSL L L + R I A+ + +LH +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
IH D+K +N+LLD+ A +SDFG+A+ + + + + T YMAPE G +
Sbjct: 149 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEI 205
Query: 180 SANGDVYSFGIMLIETFTRKKPTDE 204
+ D+YSFG++L+E T DE
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 48/291 (16%)
Query: 8 IGRGGFGSVFKARL------GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+G G FG VF A D M VAVK + F E E++ + H++I++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHS--------------SNYILDIYQRLNIMIDVA 107
C+ +V EYM HG L ++L S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 108 STLEYL---HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA 164
+ + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 165 TIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 224
I +M PE + + DV+SFG++L E FT K W +S
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------------QPWYQLSN 243
Query: 225 KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
E +D RE C V+ + C P+QR + K++ +L
Sbjct: 244 TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 48/291 (16%)
Query: 8 IGRGGFGSVFKARL------GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+G G FG VF A D M VAVK + F E E++ + H++I++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHS--------------SNYILDIYQRLNIMIDVA 107
C+ +V EYM HG L ++L S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 108 STLEYL---HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA 164
+ + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 165 TIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 224
I +M PE + + DV+SFG++L E FT K W +S
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------------QPWYQLSN 237
Query: 225 KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
E +D RE C V+ + C P+QR + K++ +L
Sbjct: 238 TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 120/291 (41%), Gaps = 48/291 (16%)
Query: 8 IGRGGFGSVFKARL------GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+G G FG VF A D M VAVK + F E E++ + H++I++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHS--------------SNYILDIYQRLNIMIDVA 107
C+ +V EYM HG L ++L S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 108 STLEYL---HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA 164
+ + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 165 TIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 224
I +M PE + + DV+SFG++L E FT K W +S
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK----------------QPWYQLSN 266
Query: 225 KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
E +D RE C V+ + C P+QR + K++ +L
Sbjct: 267 TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 250
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 251 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLK 127
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 133
Query: 128 PSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 187
N L+ +N V +SDFG+ + + +D T T T + + +PE R S+ DV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 188 FGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDIHFVAKEQ 245
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 233
Query: 246 CVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 234 --THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 34/291 (11%)
Query: 3 SENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYGRVFKS---FDVECEMMKSIHHR 56
+ +IG G FG V+K L EV V + L+ G K F E +M H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
NII++ S + ++ EYM +G+L+K+L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA-- 164
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGK 175
+ +H DL N+L++ N+V +SDFG++++L + +T T I + APE
Sbjct: 165 -NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 176 EGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+SFGI++ E T ++P E+ N E+ +ND + T
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA--INDGFRLPT---------- 271
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT---KLVKIRDSL 282
C S ++ + M+C + +R +IV+ KL++ DSL
Sbjct: 272 --------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 88
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 246
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 247 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 249
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 250 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 90
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 147
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 248
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 249 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 8 IGRGGFGSVFKARL------GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+G G FG VF A D + VAVK K F E E++ ++ H +I+K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYIL----------DIYQRLNIMIDVAST 109
C + +V EYM HG L K+L H + +L Q L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYM 169
+ YL S +H DL N L+ +N++ + DFG+++ + D + T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 170 APEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 229
PE + + DV+S G++L E FT K W +S E+++
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGK----------------QPWYQLSNNEVIE 241
Query: 230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
R C V+ + + C P R N K I T L
Sbjct: 242 CITQGRV---LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLL 284
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 92
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 250
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 251 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLK 127
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 128
Query: 128 PSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 187
N L+ +N V +SDFG+ + + +D T T T + + +PE R S+ DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 188 FGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDIHFVAKEQ 245
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 228
Query: 246 CVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 229 --THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLK 127
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 130
Query: 128 PSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 187
N L+ +N V +SDFG+ + + +D T T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 188 FGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDIHFVAKEQ 245
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 230
Query: 246 CVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 231 --THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 85
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA--- 142
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 243
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 244 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 252
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 253 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 111
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 168
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 269
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 270 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 112
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA ++YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 169
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 270
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ + E C ++ V ++C E R + E+V+++ I
Sbjct: 271 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 28/278 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLK 127
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 131
Query: 128 PSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 187
N L+ +N V +SDFG+ + + +D T T T + + +PE R S+ DV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 188 FGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDIHFVAKEQ 245
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 231
Query: 246 CVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 232 --THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 93
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 251
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 94
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 252
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 253 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 98
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 155
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 256
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 257 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 91
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 148
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 249
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 250 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 30/279 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKVISSCS 66
IG G FG V + +VA+K ++ G + + F E E+M + H ++++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIK--TIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDL 149
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
N L+ +N V +SDFG+ + + +D T T T + + +PE R S+ DV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 187 SFGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDIHFVAKE 244
SFG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS---------- 250
Query: 245 QCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ V+ + C E PE R ++ +L +I +S L
Sbjct: 251 ---THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 28/278 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG V + +VA+K + + F E E+M + H ++++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLK 127
+ LV E+M HG L YL + + L + +DV + YL A VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 128 PSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYS 187
N L+ +N V +SDFG+ + + +D T T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 188 FGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSREDIHFVAKEQ 245
FG+++ E F+ K P + N E+ V D IST + P L S
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEV-----VED---ISTGFRLYKPRLAS----------- 230
Query: 246 CVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ V+ + C E PE R ++ +L I S L
Sbjct: 231 --THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 32/288 (11%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFN--LQYGRVFKSFDVECEMMKSIHHRNI 58
N +IGRG FG V+ L G + AVK N G V F E +MK H N+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-SQFLTEGIIMKDFSHPNV 152
Query: 59 IKVISSCSNEEFKALV-LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ ++ C E LV L YM HG L ++ + + + + + VA +++L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 209
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGK 175
S + +H DL N +LD+ ++DFG+A+ + ++ ++ +T A + +MA E +
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ + DV+SFG++L E TR P P D +
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLL 310
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
+ + E C ++ V ++C E R + E+V+++ I + +
Sbjct: 311 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 11/205 (5%)
Query: 6 NLIGRGGFGSVFKARLGDGMEVAVK----VFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
N G GGFG V+K + + VAVK + ++ + + FD E ++ H N++++
Sbjct: 28 NKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S+ + LV Y P+GSL L L + R I A+ + +LH +
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH- 145
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
IH D+K +N+LLD+ A +SDFG+A+ + ++ + T Y APE G +
Sbjct: 146 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEI 202
Query: 180 SANGDVYSFGIMLIETFTRKKPTDE 204
+ D+YSFG++L+E T DE
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ + F++F E +++ H NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL K+LH ++Q ++I A ++YLH + +IH
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
D+K +N+ L + + + DFG+A + +R S Q ++ +MAPE + S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVYS+GI+L E T + P I N
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 74 EEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 129
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 188
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 189 WSFGILLTELTTKGRVPYPGMVNREV 214
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V+EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 199 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 239
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 30/276 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VAVK+ ++ G + + F E + M + H ++K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKM--IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
E +V EY+ +G L YL S L+ Q L + DV + +L S Q IH DL
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDL 130
Query: 127 KPSNVLLDDNMVAHLSDFGIAK-LLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
N L+D ++ +SDFG+ + +L + +S++ T+ + + APE + S+ DV
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKWSAPEVFHYFKYSSKSDV 188
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKE 244
++FGI++ E F+ K P D N E+ LK + P+L S
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVLK-------VSQGHRLYRPHLAS---------- 231
Query: 245 QCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD 280
++ + C E PE+R +++++ + +R+
Sbjct: 232 ---DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 132
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 191
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 192 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 232
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 233 CPESLHDLMCQCWRKEPEER 252
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V+EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK I H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 199 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 239
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 388
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 447
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 448 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 488
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 489 CPESLHDLMCQCWRKEPEER 508
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDV 195
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 189
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 190 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 230
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 231 CPESLHDLMCQCWRKDPEER 250
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 73 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 187
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 188 WSFGILLTELTTKGRVPYPGMVNREV 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVCEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 199 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 239
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 199 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 239
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 240 CPESLHDLMCQCWRKDPEER 259
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 28/211 (13%)
Query: 5 NNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYGRV--FKSFDVECEMMKSI-HHRNI 58
++IG G FG V KAR+ G M+ A+K +Y + F E E++ + HH NI
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---------------LDIYQRLNIM 103
I ++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 104 IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL 163
DVA ++YL Q IH DL N+L+ +N VA ++DFG+++ +++ +T
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
+ +MA E + N DV+S+G++L E
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 195
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 28/211 (13%)
Query: 5 NNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYGRV--FKSFDVECEMMKSI-HHRNI 58
++IG G FG V KAR+ G M+ A+K +Y + F E E++ + HH NI
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---------------LDIYQRLNIM 103
I ++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 104 IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL 163
DVA ++YL Q IH DL N+L+ +N VA ++DFG+++ +++ +T
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
+ +MA E + N DV+S+G++L E
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 67 NEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L + L + Q +++ +AS + Y+ +H D
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V+EYM G L +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVMEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 8 IGRGGFGSVFKARLGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG+G FG V LGD G +VAVK ++ ++F E +M + H N+++++
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 66 SNEEFKA-LVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ +V EYM GSL YL S +L L +DV +EYL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 125
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E + S
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS 180
Query: 184 DVYSFGIMLIETFT 197
DV+SFGI+L E ++
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 8 IGRGGFGSVFKARLGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG+G FG V LGD G +VAVK ++ ++F E +M + H N+++++
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 66 SNEEFKA-LVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ +V EYM GSL YL S +L L +DV +EYL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 312
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E + S
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS 367
Query: 184 DVYSFGIMLIETFT 197
DV+SFGI+L E ++
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 8 IGRGGFGSVFKARLGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG+G FG V LGD G +VAVK ++ ++F E +M + H N+++++
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 66 SNEEFKA-LVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ +V EYM GSL YL S +L L +DV +EYL +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 140
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E + S
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKL-PVKWTAPEALREKKFSTKS 195
Query: 184 DVYSFGIMLIETFT 197
DV+SFGI+L E ++
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM GSL +L + Y RL ++D+A+ + + + +H D
Sbjct: 251 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+ +L+ + + Q I + APE GR + DV
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 365
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
+SFGI+L E T+ G + VN +E++D +
Sbjct: 366 WSFGILLTELTTK---------GRVPYPGMVN-------REVLD---QVERGYRMPCPPE 406
Query: 246 CVSFVFNVAMECTVESPEQR 265
C + ++ +C + PE+R
Sbjct: 407 CPESLHDLMCQCWRKDPEER 426
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 3 SENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRN 57
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FG 116
II++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGK 175
Y +H DL N+L++ N+V +SDFG+A++L + + T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 176 EGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD----- 264
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 8 IGRGGFGSVFKARLGD--GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG+G FG V LGD G +VAVK ++ ++F E +M + H N+++++
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 66 SNEEFKA-LVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ +V EYM GSL YL S +L L +DV +EYL +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 131
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DL NVL+ ++ VA +SDFG LT+E ST T L + + APE +E S
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKL-PVKWTAPEALREAAFSTKS 186
Query: 184 DVYSFGIMLIETFT 197
DV+SFGI+L E ++
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G+G FG V+ VA+K L+ G + ++F E ++MK + H ++++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHFGYSAQVIHCD 125
E +V EYM G L +L + Y RL ++D+A+ + + + +H D
Sbjct: 84 EEPI-YIVTEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 186 YSFGIMLIETFTRKK-PTDEIFNGEM 210
+SFGI+L E T+ + P + N E+
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH+S ++ + ++I A ++YLH + +IH
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 132
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L ++ + DFG+A + +R S Q +I +MAPE + S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINN 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 28/210 (13%)
Query: 6 NLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYGRV--FKSFDVECEMMKSI-HHRNII 59
++IG G FG V KAR+ G M+ A+K +Y + F E E++ + HH NII
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYI---------------LDIYQRLNIMI 104
++ +C + + L +EY PHG+L +L S + L Q L+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA 164
DVA ++YL Q IH +L N+L+ +N VA ++DFG+++ +++ +T
Sbjct: 147 DVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 165 TIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
+ +MA E + N DV+S+G++L E
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 2 FSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHR 56
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-F 115
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYG 174
GY +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 155 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 175 KEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 233
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 252
Query: 234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 253 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 298
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 2 FSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHR 56
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-F 115
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ-TLATIGYMAPEYG 174
GY +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 175 KEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 233
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 235
Query: 234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 236 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 281
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 40/286 (13%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL-------QYGRVFKSFDVECEMMKSIHHRNII 59
IG+GGFG V K RL D VA+K L + F+ F E +M +++H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K+ N +V+E++P G L L + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 120 QVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY- 173
++H DL+ N+ LD+N + A ++DFG L+++ + ++ + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFG----LSQQSVHSV-SGLLGNFQWMAPETI 198
Query: 174 -GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
+E + D YSF ++L T + P DE G++ N+
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-----------------NM 241
Query: 233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ E + E C + NV C P++R + IV +L ++
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVF----NLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+IG GGFG V++A +GD EVAVK + + ++ E ++ + H NII +
Sbjct: 14 IIGIGGFGKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
C E LV+E+ G L + L DI +N + +A + YLH +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPI 129
Query: 122 IHCDLKPSNVLLDD--------NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY 173
IH DLK SN+L+ N + ++DFG+A RE T + +MAPE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAWMAPEV 185
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKP 201
+ S DV+S+G++L E T + P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 2 FSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHR 56
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-F 115
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYG 174
GY +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 165 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 175 KEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 233
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 262
Query: 234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 263 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 3 SENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRN 57
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FG 116
II++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGK 175
Y +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 176 EGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD----- 264
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 3 SENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRN 57
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FG 116
II++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGK 175
Y +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 176 EGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD----- 264
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 3 SENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRN 57
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FG 116
II++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGK 175
Y +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 176 EGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD----- 264
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 2 FSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHR 56
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-F 115
NII++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYG 174
GY +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 175 KEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 233
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 264
Query: 234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 8 IGRGGFGSVFKARL---GD--GMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKV 61
+G G FG V R GD G +VAVK + G E E++++++H NI+K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 62 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 145
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTLATIGYMAPEYGKEGR 178
Q +H DL NVL++ + DFG+ K + T ++ T++ + + + APE + +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 179 VSANGDVYSFGIMLIETFT 197
DV+SFG+ L E T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 3 SENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRN 57
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FG 116
II++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGK 175
Y +H DL N+L++ N+V +SDFG+ ++L + + T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD----- 264
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 2 FSENNL-----IGRGGFGSVFKAR---LGDGMEVAVKVFNLQYGRV--FKSFDVECEMMK 51
F E +L +G+G FGSV R LGD V V LQ+ + F E +++K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 52 SIHHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAST 109
++H I+K +S LV+EY+P G L +L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGY 168
+EYL S + +H DL N+L++ ++DFG+AKLL + D ++ + I +
Sbjct: 124 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 169 MAPEYGKEGRVSANGDVYSFGIMLIETFT 197
APE + S DV+SFG++L E FT
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 2 FSENNL-----IGRGGFGSVFKAR---LGDGMEVAVKVFNLQYGRV--FKSFDVECEMMK 51
F E +L +G+G FGSV R LGD V V LQ+ + F E +++K
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 52 SIHHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAST 109
++H I+K +S + LV+EY+P G L +L LD + L +
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-REDISTIQTQTLATIGY 168
+EYL S + +H DL N+L++ ++DFG+AKLL +D ++ + I +
Sbjct: 127 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 169 MAPEYGKEGRVSANGDVYSFGIMLIETFT 197
APE + S DV+SFG++L E FT
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 2 FSENNL-----IGRGGFGSVFKAR---LGDGMEVAVKVFNLQYGRV--FKSFDVECEMMK 51
F E +L +G+G FGSV R LGD V V LQ+ + F E +++K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 52 SIHHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAST 109
++H I+K +S + LV+EY+P G L +L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGY 168
+EYL S + +H DL N+L++ ++DFG+AKLL + D ++ + I +
Sbjct: 128 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 169 MAPEYGKEGRVSANGDVYSFGIMLIETFT 197
APE + S DV+SFG++L E FT
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 8 IGRGGFGSVFKARL---GD--GMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKV 61
+G G FG V R GD G +VAVK + G E E++++++H NI+K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 62 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTLATIGYMAPEYGKEGR 178
Q +H DL NVL++ + DFG+ K + T ++ T++ + + + APE + +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 179 VSANGDVYSFGIMLIETFT 197
DV+SFG+ L E T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 6 NLIGRGGFGSVFKARL----GDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+IG G G V RL + VA+K Y R + F E +M H NII+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FGYSA 119
+ + +V EYM +GSL+ +L + + I Q + ++ V + + YL GY
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-- 172
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGR 178
+H DL NVL+D N+V +SDFG++++L + D + T I + APE
Sbjct: 173 --VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 179 VSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S+ DV+SFG+++ E ++P + N ++ IS+ E E
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----------ISSVE---------EG 270
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
A C + + ++C + QR +IV+ L D+L+R+
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 2 FSENNL-----IGRGGFGSVFKAR---LGDGMEVAVKVFNLQYGRV--FKSFDVECEMMK 51
F E +L +G+G FGSV R LGD V V LQ+ + F E +++K
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 52 SIHHRNIIKV--ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAST 109
++H I+K +S + LV+EY+P G L +L LD + L +
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGY 168
+EYL S + +H DL N+L++ ++DFG+AKLL + D ++ + I +
Sbjct: 140 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 169 MAPEYGKEGRVSANGDVYSFGIMLIETFT 197
APE + S DV+SFG++L E FT
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH+S ++ + ++I A ++YLH + +IH
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L ++ + DFG+A +R S Q +I +MAPE + S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 6 NLIGRGGFGSVFKARL----GDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+IG G G V RL + VA+K Y R + F E +M H NII+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FGYSA 119
+ + +V EYM +GSL+ +L + + I Q + ++ V + + YL GY
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-- 172
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEGR 178
+H DL NVL+D N+V +SDFG++++L + D + T I + APE
Sbjct: 173 --VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 179 VSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S+ DV+SFG+++ E ++P + N ++ IS+ E E
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----------ISSVE---------EG 270
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
A C + + ++C + QR +IV+ L D+L+R+
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNL---QYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G GG +V+ A ++VA+K + + K F+ E + H+NI+ +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
++ LV+EY+ +L +Y+ S L + +N + +++ H +++H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHAH---DMRIVH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+L+D N + DFGIAK L+ + T L T+ Y +PE K
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECT 193
Query: 184 DVYSFGIMLIETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTKEI 227
D+YS GI+L E + P FNGE + +KH + D +P T ++
Sbjct: 194 DIYSIGIVLYEMLVGEPP----FNGETAVSIAIKH-IQDSVPNVTTDV 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVF-KSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VA+K L+ G + +SF E ++MK + H ++++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 67 NEEFKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYM GSL +L L + +++ VA+ + Y+ IH D
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ + ++ ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 189
Query: 186 YSFGIMLIETFTRKK 200
+SFGI+L E T+ +
Sbjct: 190 WSFGILLTELVTKGR 204
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 75 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 130
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH+S ++ + ++I A ++YLH + +IH
Sbjct: 89 STAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L ++ + DFG+A +R S Q +I +MAPE + S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 78 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 100 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 155
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 73 STAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A + +R S Q +I +MAPE + + S
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 36/291 (12%)
Query: 3 SENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRN 57
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FG 116
II++ + + +V EYM +GSL+ +L + + Q + ++ +AS ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGK 175
+ +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 168 F----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 176 EGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD----- 264
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL-------QYGRVFKSFDVECEMMKSIHHRNII 59
IG+GGFG V K RL D VA+K L + F+ F E +M +++H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K+ N +V+E++P G L L + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 120 QVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY- 173
++H DL+ N+ LD+N + A ++DFG +++ + ++ + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGT----SQQSVHSV-SGLLGNFQWMAPETI 198
Query: 174 -GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
+E + D YSF ++L T + P DE G++ N+
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-----------------NM 241
Query: 233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ E + E C + NV C P++R + IV +L ++
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ ++ EYM +G L YL + Q L + DV +EYL S Q +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 127 KPSNVLLDDNMVAHLSDFGIAK-LLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
N L++D V +SDFG+++ +L E+ S++ ++ + + PE + S+ D+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEVLMYSKFSSKSDI 204
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
++FG+++ E ++ K E F T +H + P+L S +
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK--------- 249
Query: 246 CVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD 280
V+ + C E ++R K +++ ++ + D
Sbjct: 250 ----VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 8 IGRGGFGSVF-----KARLGDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKV 61
+G G FG V G G VAVK G +S + E +++++++H +IIK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 62 ISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
C ++ K+L V+EY+P GSL YL + + + Q L + + YLH S
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEGR 178
IH +L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 179 VSANGDVYSFGIMLIETFT-----RKKPTD-----EIFNGEMTL 212
DV+SFG+ L E T + PT I G+MT+
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 240
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 81 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ ++ T + I + APE G + DV
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 196 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 234
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 235 DNCPEELYQLMRLCWKERPEDR 256
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVI 62
++G GG V AR L D +VAVKV R + F E + +++H I+ V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 63 SSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ E +V+EY+ +L +H+ + + I + +A + L+F +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYGK 175
+IH D+KP+N+++ + DFGIA+ + D TQT A IG Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTK 225
V A DVYS G +L E T + P F G+ + +H D +P S +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSAR 242
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ ++ T + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 194 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 233 DNCPEELYQLMRLCWKERPEDR 254
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 17/230 (7%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVI 62
++G GG V AR L D +VAVKV R + F E + +++H I+ V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 63 SSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ E +V+EY+ +L +H+ + + I + +A + L+F +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYGK 175
+IH D+KP+N+++ + DFGIA+ + D TQT A IG Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
V A DVYS G +L E T + P + +H D +P S +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSAR 242
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 80 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ ++ T + I + APE G + DV
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 195 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 233
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 234 DNCPEELYQLMRLCWKERPEDR 255
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 85 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ ++ T + I + APE G + DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 200 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 238
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 239 DNCPEELYQLMRLCWKERPEDR 260
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ ++ T + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 194 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 233 DNCPEELYQLMRLCWKERPEDR 254
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 88 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ ++ T + I + APE G + DV
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 203 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 241
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 242 DNCPEELYQLMRLCWKERPEDR 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 87 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ ++ T + I + APE G + DV
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 202 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 240
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 241 DNCPEELYQLMRLCWKERPEDR 262
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 40/286 (13%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL-------QYGRVFKSFDVECEMMKSIHHRNII 59
IG+GGFG V K RL D VA+K L + F+ F E +M +++H NI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K+ N +V+E++P G L L + + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 120 QVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY- 173
++H DL+ N+ LD+N + A ++DF L+++ + ++ + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFS----LSQQSVHSV-SGLLGNFQWMAPETI 198
Query: 174 -GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
+E + D YSF ++L T + P DE G++ N+
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI-----------------NM 241
Query: 233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
+ E + E C + NV C P++R + IV +L ++
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 73 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A +R S Q +I +MAPE + + S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 193
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 194 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 233 DNCPEELYQLMRLCWKERPEDR 254
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 21/232 (9%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVI 62
++G GG V AR L D +VAVKV R + F E + +++H I+ V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 63 SSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ E +V+EY+ +L +H+ + + I + +A + L+F +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT-LATIGYMAPEYGKEG 177
+IH D+KP+N+L+ + DFGIA+ + S QT + T Y++PE +
Sbjct: 135 NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTK 225
V A DVYS G +L E T + P F G+ + +H D +P S +
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSAR 242
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 85 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 199
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 200 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 238
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 239 DNCPEELYQLMRLCWKERPEDR 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 84 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 198
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 199 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 237
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 238 DNCPEELYQLMRLCWKERPEDR 259
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 89 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 203
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 204 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 242
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 243 DNCPEELYQLMRLCWKERPEDR 264
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 93 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 148
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A +R S Q +I +MAPE + + S
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 126/274 (45%), Gaps = 26/274 (9%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ ++ EYM +G L YL + Q L + DV +EYL S Q +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
N L++D V +SDFG+++ + ++ ++ + + + PE + S+ D++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFP-VRWSPPEVLMYSKFSSKSDIW 190
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQC 246
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK---------- 234
Query: 247 VSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD 280
V+ + C E ++R K +++ ++ + D
Sbjct: 235 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 74 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 188
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 189 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 227
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 228 DNCPEELYQLMRLCWKERPEDR 249
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG+V+K + GD VAVK+ N+ + ++F E +++ H NI+ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + A+V ++ SL +LH ++ + ++I A ++YLH + +IH
Sbjct: 101 STKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK---EGRVSA 181
DLK +N+ L +++ + DFG+A +R S Q +I +MAPE + + S
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFN 207
DVY+FGI+L E T + P I N
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVF-----KARLGDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKV 61
+G G FG V G G VAVK G +S + E E++++++H +I+K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 62 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
C ++ K+ LV+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 130
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEGR 178
IH L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 179 VSANGDVYSFGIMLIETFT 197
DV+SFG+ L E T
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVF-----KARLGDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKV 61
+G G FG V G G VAVK G +S + E E++++++H +I+K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 62 ISSCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
C ++ K+ LV+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQICEGMAYLH---AQ 131
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEGR 178
IH L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 179 VSANGDVYSFGIMLIETFT 197
DV+SFG+ L E T
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 2 FSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHR 56
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-F 115
NII++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ-TLATIGYMAPEYG 174
GY +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 175 KEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 233
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 235
Query: 234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 236 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 281
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
+G G FG V+ A +VAVK V ++F E +MK++ H ++K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCDL 126
E ++ E+M GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
+ +N+L+ ++V ++DFG+A+++ + + + I + APE G + DV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVW 196
Query: 187 SFGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
SFGI+L+E T + P + N E+ L R E
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVI-------------------RALER-GYRMPRPEN 236
Query: 246 CVSFVFNVAMECTVESPEQR 265
C ++N+ M C PE+R
Sbjct: 237 CPEELYNIMMRCWKNRPEER 256
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 7/208 (3%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ ++ EYM +G L YL + Q L + DV +EYL S Q +H DL
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
N L++D V +SDFG+++ + +D T + + + PE + S+ D++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLKH 214
+FG+++ E ++ K E F T +H
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETAEH 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ ++ EYM +G L YL + Q L + DV +EYL S Q +H DL
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
N L++D V +SDFG+++ + +D T + + + PE + S+ D++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQC 246
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK---------- 240
Query: 247 VSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD 280
V+ + C E ++R K +++ ++ + D
Sbjct: 241 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 8 IGRGGFGSVF-----KARLGDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKV 61
+G G FG V G G VAVK G +S + E +++++++H +IIK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 62 ISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
C ++ K+L V+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEGR 178
IH +L NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 179 VSANGDVYSFGIMLIETFT-----RKKPTD-----EIFNGEMTL 212
DV+SFG+ L E T + PT I G+MT+
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 240
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ ++ EYM +G L YL + Q L + DV +EYL S Q +H DL
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
N L++D V +SDFG+++ + +D T + + + PE + S+ D++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQC 246
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK---------- 229
Query: 247 VSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD 280
V+ + C E ++R K +++ ++ + D
Sbjct: 230 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ ++ EYM +G L YL + Q L + DV +EYL S Q +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
N L++D V +SDFG+++ + +D T + + + PE + S+ D++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQC 246
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK---------- 234
Query: 247 VSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD 280
V+ + C E ++R K +++ ++ + D
Sbjct: 235 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 2 FSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHR 56
S + ++G G FG V RL E++V + L+ G + + F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-F 115
NII++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYG 174
GY +H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 175 KEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 233
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD---- 264
Query: 234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + +VA+K+ ++ G + + F E ++M ++ H ++++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ ++ EYM +G L YL + Q L + DV +EYL S Q +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
N L++D V +SDFG+++ + +D T + + + PE + S+ D++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQC 246
+FG+++ E ++ K E F T +H + P+L S +
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQG------LRLYRPHLASEK---------- 249
Query: 247 VSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD 280
V+ + C E ++R K +++ ++ + D
Sbjct: 250 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 24/224 (10%)
Query: 8 IGRGGFGSVF-----KARLGDGMEVAVKVFNLQYGRVFKS-FDVECEMMKSIHHRNIIKV 61
+G G FG V G G VAVK G +S + E +++++++H +IIK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 62 ISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
C + +L V+EY+P GSL YL + + + Q L + + YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEGR 178
IH DL NVLLD++ + + DFG+AK + + ++ + + + APE KE +
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 179 VSANGDVYSFGIMLIETFT-----RKKPTD-----EIFNGEMTL 212
DV+SFG+ L E T + PT I G+MT+
Sbjct: 214 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 257
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
+G G FG V+ A +VAVK V ++F E +MK++ H ++K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCDL 126
E ++ E+M GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
+ +N+L+ ++V ++DFG+A+++ + + + I + APE G + DV+
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVW 369
Query: 187 SFGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
SFGI+L+E T + P + N E+ L R E
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPEVI-------------------RALER-GYRMPRPEN 409
Query: 246 CVSFVFNVAMECTVESPEQR 265
C ++N+ M C PE+R
Sbjct: 410 CPEELYNIMMRCWKNRPEER 429
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 7 LIGRGGFGSVFKARL-GDGME---VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKV 61
+IG G FG V + RL G + VA+K Y R + F E +M H NII++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+N ++ E+M +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 139
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA---TIGYMAPEYGKEGR 178
+H DL N+L++ N+V +SDFG+++ L +T +L I + APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 179 VSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
++ D +S+GI++ E + ++P +W +S +++++ +D
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERP------------YW-----DMSNQDVIN---AIEQD 239
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
C + + + ++C ++ NA+ ++V D ++RN
Sbjct: 240 YRLPPPPDCPTSLHQLMLDCW----QKDRNARPRFPQVVSALDKMIRN 283
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G FG V + A G + VAVK L F E M S+ HRN+I+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEG 177
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 231
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
E C ++NV ++C PE R V +RD LL
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR-------PTFVALRDFLL 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G FG V + A G + VAVK L F E M S+ HRN+I+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEG 177
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 241
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
E C ++NV ++C PE R V +RD LL
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDR-------PTFVALRDFLL 280
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E +++E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 3 SENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRN 57
S + ++G G FG V RL E++V + L+ G + + F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
II++ + + +V E M +GSL+ +L + + Q + ++ +AS ++YL
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS--- 164
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGKE 176
+H DL N+L++ N+V +SDFG++++L + + T+ I + +PE
Sbjct: 165 DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 177 GRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ ++ DV+S+GI+L E + ++P E+ N ++ + VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI--------------KAVD------ 264
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
E C + ++ + ++C + R ++IV+ I D L+RN
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS----ILDKLIRN 310
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V+ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +V EYMP+G+L YL N + L + ++S +EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N V ++DFG+++L+T D T I + APE S DV
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 32/269 (11%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL---LSREDIHFVA 242
++FG++L E T +S +DP+ L +D
Sbjct: 194 WAFGVLLWEIATYG----------------------MSPYPGIDPSQVYELLEKDYRMER 231
Query: 243 KEQCVSFVFNVAMECTVESPEQRINAKEI 271
E C V+ + C +P R + EI
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 7 LIGRGGFGSVFKARLG----DGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKV 61
+IG G FG V RL + VA+K + Y + + F E +M H NII +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FGYSAQ 120
+ + +V EYM +GSL+ +L ++ + Q + ++ +++ ++YL GY
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY--- 145
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGKEGRV 179
+H DL N+L++ N+V +SDFG++++L + + T+ I + APE +
Sbjct: 146 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 180 SANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 238
++ DV+S+GI++ E + ++P E+ N ++ I E E
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWEMTNQDV-----------IKAVE---------EGY 244
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
+ C + ++ + ++C + R EIV L D L+RN
Sbjct: 245 RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML----DKLIRN 287
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH +
Sbjct: 75 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDV 189
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 190 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 228
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 229 DNCPEELYQLMRLCWKERPEDR 250
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G FG V + A G + VAVK L F E M S+ HRN+I+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEG 177
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 231
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
E C ++NV ++C PE R V +RD LL
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR-------PTFVALRDFLL 270
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G FG V + A G + VAVK L F E M S+ HRN+I+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEG 177
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 235
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
E C ++NV ++C PE R V +RD LL
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDR-------PTFVALRDFLL 274
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 32/269 (11%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +++E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL---LSREDIHFVA 242
++FG++L E T +S +DP+ L +D
Sbjct: 194 WAFGVLLWEIATYG----------------------MSPYPGIDPSQVYELLEKDYRMER 231
Query: 243 KEQCVSFVFNVAMECTVESPEQRINAKEI 271
E C V+ + C +P R + EI
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G FG V + A G + VAVK L F E M S+ HRN+I+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEG 177
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 235
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
E C ++NV ++C PE R V +RD LL
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDR-------PTFVALRDFLL 274
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G FG V + A G + VAVK L F E M S+ HRN+I+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEG 177
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 241
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
E C ++NV ++C PE R V +RD LL
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDR-------PTFVALRDFLL 280
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 41/286 (14%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G FG V + A G + VAVK L F E M S+ HRN+I+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ K +V E P GSL L H +++L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTIQTQTLATIGYMAPEYGKEG 177
+ IH DL N+LL + + DFG+ + L + +D +Q + APE K
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
S D + FG+ L E FT + W+ ++ +I+ + + +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ----------------EPWIGLNGSQIL--HKIDKEG 231
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
E C ++NV ++C PE R V +RD LL
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR-------PTFVALRDFLL 270
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 44/294 (14%)
Query: 5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRV-----FKSFDVECEMMKSIHHRNII 59
+ +IG+G FG V+ D + ++ R+ ++F E +M+ ++H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 60 KVIS-SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+I E ++L YM HG L +++ S + ++ + VA +EYL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA--TIGYMAPEYGKE 176
+ +H DL N +LD++ ++DFG+A+ + + ++Q A + + A E +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 177 GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 236
R + DV+SFG++L E TR P +H +DP L+
Sbjct: 203 YRFTTKSDVWSFGVLLWELLTRGAP---------PYRH-------------IDPFDLT-- 238
Query: 237 DIHFVAK-------EQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL 283
HF+A+ E C ++ V +C P R + +V ++ +I +LL
Sbjct: 239 --HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E +++E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 7 LIGRGGFGSVFKARL-GDGME---VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKV 61
+IG G FG V + RL G + VA+K Y R + F E +M H NII++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+N ++ E+M +G+L+ +L ++ + Q + ++ +AS + YL
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSY 137
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA---TIGYMAPEYGKEGR 178
+H DL N+L++ N+V +SDFG+++ L T +L I + APE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 179 VSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED 237
++ D +S+GI++ E + ++P +W +S +++++ +D
Sbjct: 198 FTSASDAWSYGIVMWEVMSFGERP------------YW-----DMSNQDVIN---AIEQD 237
Query: 238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
C + + + ++C ++ NA+ ++V D ++RN
Sbjct: 238 YRLPPPPDCPTSLHQLMLDCW----QKDRNARPRFPQVVSALDKMIRN 281
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVI 62
++G GG V AR L +VAVKV R + F E + +++H I+ V
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 63 SSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
++ E +V+EY+ +L +H+ + + I + +A + L+F +
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYGK 175
+IH D+KP+N+++ + DFGIA+ + D TQT A IG Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTK 225
V A DVYS G +L E T + P F G+ + +H D +P S +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSAR 242
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N ++ L + ++S +EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 44/290 (15%)
Query: 8 IGRGGFGSVFKARL-----GDGME-VAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G FG V+K L G+ + VA+K + G + + F E + + H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL-----HSS----------NYILDIYQRLNIMID 105
++ + ++ +++ Y HG L ++L HS L+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
+A+ +EYL S V+H DL NVL+ D + +SD G+ + + D + +L
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
I +MAPE G+ S + D++S+G++L E F+ + + + S +
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS----------------YGLQPYCGYSNQ 237
Query: 226 EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++V+ + R + C ++V+ + +EC E P +R K+I ++L
Sbjct: 238 DVVE---MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +++E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 32/262 (12%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIKVISSCS 66
+G G G V+ +VAVK +L+ G + +F E +MK + H+ ++++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCD 125
E ++ EYM +GSL +L + + I +N ++D+A+ + E + F IH D
Sbjct: 79 QEPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDV 193
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS--REDIHFVAK 243
+SFGI+L E T + I + +P ++ V
Sbjct: 194 WSFGILLTEIVTHGR---------------------IPYPGMTNPEVIQNLERGYRMVRP 232
Query: 244 EQCVSFVFNVAMECTVESPEQR 265
+ C ++ + C E PE R
Sbjct: 233 DNCPEELYQLMRLCWKERPEDR 254
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 44/290 (15%)
Query: 8 IGRGGFGSVFKARL-----GDGME-VAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G FG V+K L G+ + VA+K + G + + F E + + H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYL-----HSS----------NYILDIYQRLNIMID 105
++ + ++ +++ Y HG L ++L HS L+ ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
+A+ +EYL S V+H DL NVL+ D + +SD G+ + + D + +L
Sbjct: 154 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
I +MAPE G+ S + D++S+G++L E F+ + + + S +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS----------------YGLQPYCGYSNQ 254
Query: 226 EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++V+ + R + C ++V+ + +EC E P +R K+I ++L
Sbjct: 255 DVVE---MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E +++E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N ++ L + ++S +EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N ++ L + ++S +EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E ++ E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E ++ E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N ++ L + ++S +EYL IH D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 140
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 200 WAFGVLLWEIAT 211
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E ++ E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 144
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 204 IKSDVWAFGVLLWEIAT 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N ++ L + ++S +EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E ++ E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E ++ E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI------DVASTLEYLHFGYSAQ 120
E ++ E+M +G+L YL N Q +N ++ ++S +EYL
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN-----RQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
IH DL N L+ +N + ++DFG+++L+T D T I + APE + S
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 181 ANGDVYSFGIMLIETFT 197
DV++FG++L E T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVI 62
++G GG V AR L +VAVKV R + F E + +++H I+ V
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 63 SSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ E +V+EY+ +L +H+ + + I + +A + L+F +
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 134
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYGK 175
+IH D+KP+N+++ + DFGIA+ + D TQT A IG Y++PE +
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTK 225
V A DVYS G +L E T + P F G+ + +H D +P S +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSAR 242
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 47/285 (16%)
Query: 2 FSENNLIGRGGFGSVFKARL----GDGMEVAVKVFNLQYGRVFKSFDVE-----CEMMKS 52
F+ ++G+G FGSV +A+L G ++VAVK+ + S D+E MK
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK---ADIIASSDIEEFLREAACMKE 81
Query: 53 IHHRNIIKVISSCSNEEFKA------LVLEYMPHGSLEKYLHSSN-----YILDIYQRLN 101
H ++ K++ K ++L +M HG L +L +S + L + +
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
M+D+A +EYL S IH DL N +L ++M ++DFG+++ + D
Sbjct: 142 FMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWL 220
+ + ++A E + + + DV++FG+ + E TR + P I N E + ++L
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL 252
Query: 221 PISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQR 265
I + P +C+ V+++ +C P+QR
Sbjct: 253 -IGGNRLKQP-------------PECMEEVYDLMYQCWSADPKQR 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRV-FKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ + +VAVK L+ G + ++F E +MK++ H ++++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASTLEYLHFGYSAQVIHCD 125
EE ++ EYM GSL +L S + +L + +A + Y+ IH D
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 135
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +NVL+ ++++ ++DFG+A+++ + + + I + APE G + DV
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSDV 194
Query: 186 YSFGIMLIETFTRKK 200
+SFGI+L E T K
Sbjct: 195 WSFGILLYEIVTYGK 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVI 62
++G GG V AR L +VAVKV R + F E + +++H I+ V
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 63 SSCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ E +V+EY+ +L +H+ + + I + +A + L+F +
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEV-IADACQALNFSHQ 151
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYGK 175
+IH D+KP+N+++ + DFGIA+ + D TQT A IG Y++PE +
Sbjct: 152 NGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGE----MTLKHWVNDWLPISTK 225
V A DVYS G +L E T + P F G+ + +H D +P S +
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSAR 259
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 32/269 (11%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL---LSREDIHFVA 242
++FG++L E T +S +DP+ L +D
Sbjct: 194 WAFGVLLWEIATYG----------------------MSPYPGIDPSQVYELLEKDYRMER 231
Query: 243 KEQCVSFVFNVAMECTVESPEQRINAKEI 271
E C V+ + C +P R + EI
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 6 NLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIK 60
+IG G FG V RL +VAV + L+ G + + F E +M H N++
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYL-HFGYSA 119
+ + + +V+E+M +G+L+ +L + + Q + ++ +A+ + YL GY
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY-- 166
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG--YMAPEYGKEG 177
+H DL N+L++ N+V +SDFG+++++ +D + T T I + APE +
Sbjct: 167 --VHRDLAARNILVNSNLVCKVSDFGLSRVI-EDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 178 RVSANGDVYSFGIMLIETFT 197
+ ++ DV+S+GI++ E +
Sbjct: 224 KFTSASDVWSYGIVMWEVMS 243
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N + L + ++S +EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 32/284 (11%)
Query: 6 NLIGRGGFGSVFKA-RLGDG----MEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNII 59
++G G FG+V+K + +G + VA+K+ N G + F E +M S+ H +++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+++ C + + LV + MPHG L +Y+H + LN + +A + YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ER 159
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+++H DL NVL+ ++DFG+A+LL ++ I +MA E +
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 180 SANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 238
+ DV+S+G+ + E T KP D I T+EI P+LL + +
Sbjct: 220 THQSDVWSYGVTIWELMTFGGKPYDG-----------------IPTREI--PDLLEKGE- 259
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI-RDS 281
C V+ V ++C + + R KE+ + ++ RD
Sbjct: 260 RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 303
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 32/284 (11%)
Query: 6 NLIGRGGFGSVFKA-RLGDG----MEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNII 59
++G G FG+V+K + +G + VA+K+ N G + F E +M S+ H +++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+++ C + + LV + MPHG L +Y+H + LN + +A + YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ER 136
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+++H DL NVL+ ++DFG+A+LL ++ I +MA E +
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 180 SANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 238
+ DV+S+G+ + E T KP D I T+EI P+LL + +
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYDG-----------------IPTREI--PDLLEKGE- 236
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI-RDS 281
C V+ V ++C + + R KE+ + ++ RD
Sbjct: 237 RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 176 EGRVSANGDVYSFGIMLIE 194
E S + D+++ G ++ +
Sbjct: 208 EKSASKSSDLWALGCIIYQ 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 43/282 (15%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVK---VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IGRG F V++A L DG+ VA+K +F+L + E +++K ++H N+IK +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 64 SCSNEEFKALVLEYMPHGSLE---KYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
S + +VLE G L K+ ++ + + S LE++H S +
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRR 156
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
V+H D+KP+NV + V L D G+ + + + +T + T YM+PE E +
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPERIHENGYN 214
Query: 181 ANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN-----DWLPISTKE--------- 226
D++S G +L E + P + +M L D+ P+ +
Sbjct: 215 FKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 271
Query: 227 --IVDPNLLSREDIHFVAKEQCVSFVFNVAME---CTVESPE 263
++P+ R D V++V++VA CT S E
Sbjct: 272 NMCINPDPEKRPD---------VTYVYDVAKRMHACTASSLE 304
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKV---- 61
+G GGFG V + D G +VA+K + + + + +E ++MK ++H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 62 --ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR--LNIMIDVASTLEYLHFGY 117
+ + + L +EY G L KYL+ + + ++ D++S L YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 139
Query: 118 SAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
++IH DLKP N++L ++ + D G AK L D + T+ + T+ Y+APE
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELL 196
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKP 201
++ + + D +SFG + E T +P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
+G G FG V+ A +VAVK V ++F E +MK++ H ++K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTL-EYLHFGYSAQVIHCDL 126
E ++ E+M GSL +L S Q L +ID ++ + E + F IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
+ +N+L+ ++V ++DFG+A++ + I + APE G + DV+
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIKSDVW 353
Query: 187 SFGIMLIETFTRKK-PTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
SFGI+L+E T + P + N E+ L R E
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVI-------------------RALER-GYRMPRPEN 393
Query: 246 CVSFVFNVAMECTVESPEQR 265
C ++N+ M C PE+R
Sbjct: 394 CPEELYNIMMRCWKNRPEER 413
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKV---- 61
+G GGFG V + D G +VA+K + + + + +E ++MK ++H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 62 --ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR--LNIMIDVASTLEYLHFGY 117
+ + + L +EY G L KYL+ + + ++ D++S L YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 138
Query: 118 SAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
++IH DLKP N++L ++ + D G AK L D + T+ + T+ Y+APE
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELL 195
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKP 201
++ + + D +SFG + E T +P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYGRV-FKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 257
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 258 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
Query: 277 KI 278
+I
Sbjct: 302 RI 303
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 262
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 263 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
Query: 277 KI 278
+I
Sbjct: 307 RI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 259
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 260 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
Query: 277 KI 278
+I
Sbjct: 304 RI 305
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++EY G+L +YL + Y DI + ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 316
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 317 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360
Query: 277 KI 278
+I
Sbjct: 361 RI 362
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 2 FSENNL-----IGRGGFGSVFKAR-LGDGME-----VAVKVF-NLQYGRVFKSFDVECEM 49
F NNL +G G FG V +A G G E VAVK+ + + ++ E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 108
M + H NI+ ++ +C++ ++ EY +G L +L + +L+ I AS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 109 TLEYLHFG----------YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI 158
T + LHF S IH D+ NVLL + VA + DFG+A+ + + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ + +MAPE + + DV+S+GI+L E F+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 277 KI 278
+I
Sbjct: 308 RI 309
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSS-----------NYILDIYQRLNIMI-- 104
II ++ +C+ + +++EY G+L +YL + N + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 105 --DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
++G+G +G V+ R L + + +A+K + R + E + K + H+NI++ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
S F + +E +P GSL L S L ++ I LE L + + Q++H D
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 126 LKPSNVLLDD-NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE---YGKEGRVSA 181
+K NVL++ + V +SDFG +K L I+ T+ YMAPE G G A
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 182 NGDVYSFGIMLIETFTRKKPTDEI 205
D++S G +IE T K P E+
Sbjct: 206 -ADIWSLGCTIIEMATGKPPFYEL 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
++G+G +G V+ R L + + +A+K + R + E + K + H+NI++ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
S F + +E +P GSL L S L ++ I LE L + + Q++H D
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 126 LKPSNVLLDD-NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY---GKEGRVSA 181
+K NVL++ + V +SDFG +K L I+ T+ YMAPE G G A
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 182 NGDVYSFGIMLIETFTRKKPTDEI 205
D++S G +IE T K P E+
Sbjct: 192 -ADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 34/272 (12%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGR-VFKSFDVECEMMKSIHHRNIIKVISSC 65
++G+G FG K + EV V +++ ++F E ++M+ + H N++K I
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
++ + EY+ G+L + S + QR++ D+AS + YLH S +IH D
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRD 133
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL---------ATIG---YMAPEY 173
L N L+ +N ++DFG+A+L+ E ++L +G +MAPE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL 233
DV+SFGI+L E R N + D+LP +D L
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEIIGR-------VNAD-------PDYLP----RTMDFGLN 235
Query: 234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQR 265
R + C F + + C PE+R
Sbjct: 236 VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKR 267
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 7 LIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIKV 61
+IG G FG V RL E+ V + L+ G + + F E +M H NII +
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+ + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSA 152
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGKEGRVS 180
+H DL N+L++ N+V +SDFG++++L + + T+ I + APE + +
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 212
Query: 181 ANGDVYSFGIMLIETFT 197
+ DV+S+GI++ E +
Sbjct: 213 SASDVWSYGIVMWEVMS 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 127
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 128 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 186 EKSACKSSDLWALGCIIYQ 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 126
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 127 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 185 EKSACKSSDLWALGCIIYQ 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 2 FSENNL-----IGRGGFGSVFKARLGDGME------VAVKVFNLQYGRVFKS-FDVECEM 49
+ NN+ IG G FG VF+AR + VAVK+ + ++ F E +
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 50 MKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS-------------------- 89
M + NI+K++ C+ + L+ EYM +G L ++L S
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 90 ---SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 146
L ++L I VA+ + YL + +H DL N L+ +NMV ++DFG+
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 147 AKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
++ + D I +M PE R + DV+++G++L E F+
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 125
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 126 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 184 EKSACKSSDLWALGCIIYQ 202
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 124
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 125 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 183 EKSACKSSDLWALGCIIYQ 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 113/266 (42%), Gaps = 26/266 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +GSV+KA G VA+K ++ + E +M+ +++K S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+V+EY GS+ + N L + I+ LEYLHF + IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDI 151
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K N+LL+ A L+DFG+A LT D + + T +MAPE +E + D++
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQC 246
S GI IE K P +I N P T P L S FV
Sbjct: 210 SLGITAIEMAEGKPPYADIHPMRAIFMIPTN---PPPT--FRKPELWSDNFTDFVK---- 260
Query: 247 VSFVFNVAMECTVESPEQRINAKEIV 272
+C V+SPEQR A +++
Sbjct: 261 ---------QCLVKSPEQRATATQLL 277
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 141 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 248
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 249 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
Query: 277 KI 278
+I
Sbjct: 293 RI 294
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++ Y G+L +YL + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 277 KI 278
+I
Sbjct: 308 RI 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 148 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 255
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 256 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 277 KI 278
+I
Sbjct: 300 RI 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 149 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 256
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 257 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
Query: 277 KI 278
+I
Sbjct: 301 RI 302
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 145 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 252
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 253 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 277 KI 278
+I
Sbjct: 297 RI 298
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 277 KI 278
+I
Sbjct: 308 RI 309
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N ++ L + ++S +EYL IH +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 340
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 400 WAFGVLLWEIAT 411
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 263
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 264 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 277 KI 278
+I
Sbjct: 308 RI 309
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 131
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 132 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 190 EKSACKSSDLWALGCIIYQ 208
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + +VAVK+ + E EMMK I H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYILDIYQRLNI 102
II ++ +C+ + +++EY G+L +YL H+ L ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
VA +EYL S + IH DL NVL+ ++ V ++DFG+A+ + D T
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG++L E FT P +E+F
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--------- 304
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 305 ----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
Query: 277 KI 278
+I
Sbjct: 349 RI 350
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 205 EKSACKSSDLWALGCIIYQ 223
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N ++ L + ++S +EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 442 WAFGVLLWEIAT 453
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 38/290 (13%)
Query: 6 NLIGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIK 60
+IG G FG V +L E+ V + L+ G + + F E +M H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ + ++ E+M +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMN 155
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-----TIGYMAPEYGK 175
+H DL N+L++ N+V +SDFG+++ L ED ++ T T A I + APE +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR 235
+ ++ DV+S+GI++ E + GE +W ++ +++++
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSY---------GER--PYW-----DMTNQDVIN---AIE 254
Query: 236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
+D C S + + ++C + R +IV L D ++RN
Sbjct: 255 QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 300
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 205 EKSACKSSDLWALGCIIYQ 223
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 209 EKSACKSSDLWALGCIIYQ 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 8 IGRGGFGSVF--------KARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSI-HHRN 57
+G G FG V K + + + VAVK+ + + E EMMK I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-----YILDIYQ----------RLNI 102
II ++ +C+ + +++ Y G+L +YL + Y DI + ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 103 MIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT 162
+A +EYL S + IH DL NVL+ +N V ++DFG+A+ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 163 LATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PTDEIFNGEMTLKHWV 216
+ +MAPE + + DV+SFG+++ E FT P +E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV 276
L +E C + ++ + +C P QR K++V L
Sbjct: 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 277 KI 278
+I
Sbjct: 315 RI 316
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 209 EKSACKSSDLWALGCIIYQ 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 110/234 (47%), Gaps = 45/234 (19%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
LIGRG +G+V+K L D VAVKVF+ + F + + + + H NI + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFI--VG 75
Query: 67 NEEFKA-------LVLEYMPHGSLEKYL--HSSNYILDIYQRLNIMIDVASTLEYLHFG- 116
+E A LV+EY P+GSL KYL H+S+++ + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWV----SSCRLAHSVTRGLAYLHTEL 131
Query: 117 -----YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT--------REDISTIQTQTL 163
Y + H DL NVL+ ++ +SDFG++ LT ED + I +
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI--SEV 189
Query: 164 ATIGYMAPEYGKEGRVSANG--------DVYSFGIMLIETFTRKKPTDEIFNGE 209
TI YMAPE EG V+ D+Y+ G++ E F R ++F GE
Sbjct: 190 GTIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGE 239
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G +G V++ + VAVK V + F E +MK I H N+++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
E ++ E+M +G+L YL N + L + ++S +EYL IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRN 343
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L N L+ +N + ++DFG+++L+T D T I + APE + S DV
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 186 YSFGIMLIETFT 197
++FG++L E T
Sbjct: 403 WAFGVLLWEIAT 414
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 7 LIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIKV 61
+IG G FG V RL E+ V + L+ G + + F E +M H NII +
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+ + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSY 137
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGKEGRVS 180
+H DL N+L++ N+V +SDFG++++L + + T+ I + APE + +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 181 ANGDVYSFGIMLIETFT 197
+ DV+S+GI++ E +
Sbjct: 198 SASDVWSYGIVMWEVMS 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 208 EKSAXKSSDLWALGCIIYQ 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 6 NLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIK 60
+IG G FG V RL E+ V + L+ G + + F E +M H NII
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ + + ++ EYM +GSL+ +L ++ + Q + ++ + S ++YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 130
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGKEGRV 179
+H DL N+L++ N+V +SDFG++++L + + T+ I + APE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 180 SANGDVYSFGIMLIETFT 197
++ DV+S+GI++ E +
Sbjct: 191 TSASDVWSYGIVMWEVMS 208
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 152
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 153 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 211 EKSACKSSDLWALGCIIYQ 229
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRV-FKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+ + +VAVK L+ G + ++F E +MK++ H ++++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL-NIMIDVASTLEYLHFGYSAQVIHCD 125
EE ++ E+M GSL +L S + +L + +A + Y+ IH D
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRD 134
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
L+ +NVL+ ++++ ++DFG+A+++ + + + I + APE G + +V
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSNV 193
Query: 186 YSFGIMLIETFTRKK 200
+SFGI+L E T K
Sbjct: 194 WSFGILLYEIVTYGK 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F +V AR L E A+K+ L+ + K V E ++M + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 154
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 213 EKSACKSSDLWALGCIIYQ 231
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 124/295 (42%), Gaps = 40/295 (13%)
Query: 5 NNLIGRGGFGSVFKARL----GDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNI 58
++G G FGSV + L G ++VAVK L R + F E MK H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 59 IKVISSCSNEEFKAL-----VLEYMPHGSLEKYLHSSNYI-----LDIYQRLNIMIDVAS 108
I+++ C + + +L +M +G L YL S + + L M+D+A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 109 TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGY 168
+EYL + +H DL N +L D+M ++DFG++K + D + +
Sbjct: 159 GMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 169 MAPEYGKEGRVSANGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEI 227
+A E + ++ DV++FG+ + E TR P + N EM D+L + +
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY------DYL-LHGHRL 268
Query: 228 VDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL 282
P E C+ ++ + C P R + +L K+ +SL
Sbjct: 269 KQP-------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 14 GSVFKARLGDGMEVAVKVFNLQYGRVFKS--FDVECEMMKSIHHRNIIKVISSCSNEE-- 69
G ++K R G ++ VKV ++ KS F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 70 FKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKP 128
L+ +MP+GSL LH +N+++D Q + +D+A + +LH H L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNS 141
Query: 129 SNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSAN---GDV 185
+V++D++M A +S + S + ++APE ++ N D+
Sbjct: 142 RSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLK 213
+SF ++L E TR+ P ++ N E+ +K
Sbjct: 195 WSFAVLLWELVTREVPFADLSNMEIGMK 222
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 23/219 (10%)
Query: 2 FSENNL-----IGRGGFGSVFKAR-LGDGME-----VAVKVF-NLQYGRVFKSFDVECEM 49
F NNL +G G FG V +A G G E VAVK+ + + ++ E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 108
M + H NI+ ++ +C++ ++ EY +G L +L + +L+ I S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 109 TLEYLHFG----------YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI 158
T + LHF S IH D+ NVLL + VA + DFG+A+ + + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ + +MAPE + + DV+S+GI+L E F+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-----ECEMMKSIHH 55
F ++G G F + AR L E A+K+ L+ + K V E ++M + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+K+ + ++E L Y +G L KY+ + R ++ S LEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+IH DLKP N+LL+++M ++DFG AK+L+ E + T Y++PE
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 176 EGRVSANGDVYSFGIMLIE 194
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG+G G+V+ A + G EVA++ NLQ + E +M+ + NI+ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+EY+ GSL + + +D Q + + LE+LH S QVIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K N+LL + L+DFG +T E + +++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 187 SFGIMLIETFTRKKP 201
S GIM IE + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 29/208 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+++ +IG G FG V++A+L D E+ V + + G+ FK + E ++M+ + H NI+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVRL 78
Query: 62 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 113 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIGY 168
+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++ Y
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----Y 188
Query: 169 MAPE--YGKEGRVSANGDVYSFGIMLIE 194
APE +G S+ DV+S G +L E
Sbjct: 189 RAPELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG+G G+V+ A + G EVA++ NLQ + E +M+ + NI+ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+EY+ GSL + + +D Q + + LE+LH S QVIH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K N+LL + L+DFG +T E + ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 187 SFGIMLIETFTRKKP 201
S GIM IE + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG+G G+V+ A + G EVA++ NLQ + E +M+ + NI+ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+EY+ GSL + + +D Q + + LE+LH S QVIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K N+LL + L+DFG +T E + ++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 187 SFGIMLIETFTRKKP 201
S GIM IE + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG+G G+V+ A + G EVA++ NLQ + E +M+ + NI+ + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+EY+ GSL + + +D Q + + LE+LH S QVIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K N+LL + L+DFG +T E + ++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 187 SFGIMLIETFTRKKP 201
S GIM IE + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 6 NLIGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIK 60
+IG G FG V +L E+ V + L+ G + + F E +M H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ + ++ E+M +GSL+ +L ++ + Q + ++ +A+ ++YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMN 129
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-----TIGYMAPEYGK 175
+H L N+L++ N+V +SDFG+++ L ED ++ T T A I + APE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 176 EGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS 234
+ ++ DV+S+GI++ E + ++P ++ N ++ I+ E
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV-----------INAIE-------- 228
Query: 235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN 285
+D C S + + ++C + R +IV L D ++RN
Sbjct: 229 -QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 274
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 36/286 (12%)
Query: 6 NLIGRGGFGSVFKA-RLGDG----MEVAVKVFNLQYGRVFKSFDVECEMM---KSIHHRN 57
++G G FG+V K + +G + V +KV + GR +SF + M S+ H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAH 76
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I++++ C + LV +Y+P GSL ++ L LN + +A + YL
Sbjct: 77 IVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 132
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
++H +L NVLL ++DFG+A LL +D + ++ I +MA E G
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD-PNLLSRE 236
+ + DV+S+G+ + E T F E P + + + P+LL +
Sbjct: 193 KYTHQSDVWSYGVTVWELMT--------FGAE-----------PYAGLRLAEVPDLLEKG 233
Query: 237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI-RDS 281
+ + C V+ V ++C + R KE+ + ++ RD
Sbjct: 234 E-RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 29/208 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+++ +IG G FG V++A+L D E+ V + + G+ FK + E ++M+ + H NI+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVRL 78
Query: 62 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 113 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIGY 168
+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++ Y
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 169 MAPE--YGKEGRVSANGDVYSFGIMLIE 194
APE +G S+ DV+S G +L E
Sbjct: 189 RAPELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+KA+ + G A KV + + + VE E++ + H I+K++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
++ +++E+ P G+++ + + L Q I + LE L+F +S ++IH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAPEY-----GKEGRV 179
K NVL+ L+DFG+ + +++ T+Q + + T +MAPE K+
Sbjct: 136 KAGNVLMTLEGDIRLADFGV----SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
D++S GI LIE + P E+ + LK
Sbjct: 192 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 108/208 (51%), Gaps = 29/208 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+++ +IG G FG V++A+L D E+ V + + G+ FK + E ++M+ + H NI+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGEL-VAIKKVLQGKAFK--NRELQIMRKLDHCNIVRL 78
Query: 62 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 137
Query: 113 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIGY 168
+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++ Y
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 169 MAPE--YGKEGRVSANGDVYSFGIMLIE 194
APE +G S+ DV+S G +L E
Sbjct: 189 RAPELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 6 NLIGRGGFGSVFKA-RLGDG----MEVAVKVFNLQYGRVFKSFDVECEMM---KSIHHRN 57
++G G FG+V K + +G + V +KV + GR +SF + M S+ H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAH 94
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I++++ C + LV +Y+P GSL ++ L LN + +A + YL
Sbjct: 95 IVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 150
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
++H +L NVLL ++DFG+A LL +D + ++ I +MA E G
Sbjct: 151 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 178 RVSANGDVYSFGIMLIETFT 197
+ + DV+S+G+ + E T
Sbjct: 211 KYTHQSDVWSYGVTVWELMT 230
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+KA+ + G A KV + + + VE E++ + H I+K++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
++ +++E+ P G+++ + + L Q I + LE L+F +S ++IH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAPEY-----GKEGRV 179
K NVL+ L+DFG++ +++ T+Q + + T +MAPE K+
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSA----KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
D++S GI LIE + P E+ + LK
Sbjct: 200 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 15/214 (7%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
E +++E+ G+++ + L Q I + TL+ L++ + ++IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAPEY-----GKEGRV 179
K N+L + L+DFG++ TR TIQ + + T +MAPE K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTR----TIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
DV+S GI LIE + P E+ + LK
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 12 GFGSVFKARLGD----GMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVISS 64
G G+ K ++G+ G +VAVK+ N Q R V E + +K H +IIK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S +V+EY+ G L Y+ + ++ R + + S ++Y H V+H
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHR 135
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG- 183
DLKP NVLLD +M A ++DFG++ +++ D ++T + + Y APE GR+ A
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRT-SCGSPNYAAPEV-ISGRLYAGPE 191
Query: 184 -DVYSFGIMLIETFTRKKPTDE 204
D++S G++L P D+
Sbjct: 192 VDIWSCGVILYALLCGTLPFDD 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG+G G+V+ A + G EVA++ NLQ + E +M+ + NI+ + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+EY+ GSL + + +D Q + + LE+LH S QVIH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K N+LL + L+DFG +T E + ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 187 SFGIMLIETFTRKKP 201
S GIM IE + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSF-DVECEMMKSIHHRNII 59
F++ IG+G FG VFK +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SE 123
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+ IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE K+
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEI 205
+ D++S GI IE + P E+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 251
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 252 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSF-DVECEMMKSIHHRNII 59
F++ IG+G FG VFK +V A+K+ +L+ E ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SE 123
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+ IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE K+
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEI 205
+ D++S GI IE + P E+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSF-DVECEMMKSIHHRNII 59
F++ IG+G FG VFK +V A+K+ +L+ E ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SE 138
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+ IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE K+
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEI 205
+ D++S GI IE + P E+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSEL 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + + D++SFG++L E + + + + E LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
L + D C V ++ C +P+ R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + + D++SFG++L E + + + + E LK ++D
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 246
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
L + D C V ++ C +P+ R EIV L
Sbjct: 247 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 24/206 (11%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVFNLQ-------YGRVFKSFDVECEMMKSIHHRNII 59
IG+G FG V + D ++ A+K N Q VFK E ++M+ + H ++
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK----ELQIMQGLEHPFLV 78
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S +EE +V++ + G L +L + + + +L + ++ L+YL +
Sbjct: 79 NLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICELVMALDYLQ---NQ 134
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEY---GK 175
++IH D+KP N+LLD++ H++DF IA +L RE Q T+A T YMAPE K
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRK 190
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKP 201
S D +S G+ E ++P
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK Y + F +E ++ +H+NI++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 170 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 264
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 265 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSF-DVECEMMKSIHHRNII 59
F++ IG+G FG VFK +V A+K+ +L+ E ++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K S + +++EY+ GS L LD Q I+ ++ L+YLH S
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SE 143
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+ IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE K+
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEI 205
+ D++S GI IE + P E+
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSEL 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 12 GFGSVFKARLGD----GMEVAVKVFNLQYGR---VFKSFDVECEMMKSIHHRNIIKVISS 64
G G+ K ++G+ G +VAVK+ N Q R V E + +K H +IIK+
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S +V+EY+ G L Y+ + ++ R + + S ++Y H V+H
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHR 135
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG- 183
DLKP NVLLD +M A ++DFG++ +++ + + + Y APE GR+ A
Sbjct: 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEV-ISGRLYAGPE 191
Query: 184 -DVYSFGIMLIETFTRKKPTDE 204
D++S G++L P D+
Sbjct: 192 VDIWSCGVILYALLCGTLPFDD 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQ-------YGRVFKSFDVECEMMKSI 53
F NL+G+G F V++A + G+EVA+K+ + + RV + C++
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL---- 68
Query: 54 HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYL 113
H +I+++ + + + LVLE +G + +YL + + + M + + + YL
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPE 172
H S ++H DL SN+LL NM ++DFG+A T+ + + TL T Y++PE
Sbjct: 129 H---SHGILHRDLTLSNLLLTRNMNIKIADFGLA---TQLKMPHEKHYTLCGTPNYISPE 182
Query: 173 YGKEGRVSANGDVYSFGIMLIETFTRKKPTD 203
DV+S G M + P D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
E K+G + + D++SFG++L E + + + + E LK
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 221
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 222 YRAPELIFGATDYTSSI-DVWSAGCVLAE 249
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 85
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 144
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 145 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 195
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 196 YRAPELIFGATDYTSSI-DVWSAGCVLAE 223
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 96
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 155
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 156 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 206
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 207 YRAPELIFGATDYTSSI-DVWSAGCVLAE 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 29/208 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 90
Query: 62 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 149
Query: 113 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIGY 168
+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++ Y
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----Y 200
Query: 169 MAPE--YGKEGRVSANGDVYSFGIMLIE 194
APE +G S+ DV+S G +L E
Sbjct: 201 RAPELIFGATDYTSSI-DVWSAGCVLAE 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 187
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 188 YRAPELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 78
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 137
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 138 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 188
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 189 YRAPELIFGATDYTSSI-DVWSAGCVLAE 216
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 89
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 148
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 149 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 199
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 200 YRAPELIFGATDYTSSI-DVWSAGCVLAE 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 244
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 245 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 187
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 188 YRAPELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVF-NLQYGRVFKSFDV-ECEMMKSIHHRNIIKVISS 64
IG G +G VFK R D G VA+K F + V K + E M+K + H N++ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS----TLEYLHFGYSAQ 120
+ LV EY H L + LD YQR V S TL+ ++F +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE-------Y 173
IH D+KP N+L+ + V L DFG A+LLT S +AT Y +PE Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPELLVGDTQY 180
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTL 212
G V A G V++ + + + K D+++ TL
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL 219
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 175 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 279
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 280 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGR-----VFKSFDVECEMMKSIHH 55
+ + + +G G F +V+KAR + + VA+K L + + ++ E ++++ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
NII ++ + ++ +LV ++M LE + ++ +L M+ LEYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+ ++H DLKP+N+LLD+N V L+DFG+AK + + + T Y APE
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA--YXHQVVTRWYRAPELLF 185
Query: 176 EGRVSANG-DVYSFGIMLIETFTR 198
R+ G D+++ G +L E R
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLR 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 248
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 249 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 250
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 251 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 12 GFGSVFKARLGD----GMEVAVKVFNLQYGRVFKSFDV------ECEMMKSIHHRNIIKV 61
G G+ K ++G G +VAVK+ N Q +S DV E + +K H +IIK+
Sbjct: 25 GVGTFGKVKVGKHELTGHKVAVKILNRQK---IRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
S +V+EY+ G L Y+ N LD + + + S ++Y H V
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCH---RHMV 137
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
+H DLKP NVLLD +M A ++DFG++ +++ + + Y APE GR+ A
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRXSCGSPNYAAPEV-ISGRLYA 193
Query: 182 NG--DVYSFGIMLIETFTRKKPTDE 204
D++S G++L P D+
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
E +++E+ G+++ + L Q I + TL+ L++ + ++IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAPEY-----GKEGRV 179
K N+L + L+DFG++ TR IQ + + T +MAPE K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTR----XIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
DV+S GI LIE + P E+ + LK
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 7 LIGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSI-HHRNI 58
++G G FG V A + G ++VAVK+ + + + E +MM + H NI
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHS-------------SNYILDIYQRLNIMI- 104
+ ++ +C+ L+ EY +G L YL S + L+ + LN++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 105 --------DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS 156
VA +E+L F +H DL NVL+ V + DFG+A+ + +
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
++ + +MAPE EG + DV+S+GI+L E F+
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 247
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 248 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 251
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 252 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 257
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 258 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 29/208 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVRL 82
Query: 62 ------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+E + LVL+Y+P + Y + + IY +L M + +L Y
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAY 141
Query: 113 LH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIGY 168
+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++ Y
Sbjct: 142 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----Y 192
Query: 169 MAPE--YGKEGRVSANGDVYSFGIMLIE 194
APE +G S+ DV+S G +L E
Sbjct: 193 RAPELIFGATDYTSSI-DVWSAGCVLAE 219
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
E +++E+ G+++ + L Q I + TL+ L++ + ++IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAPEY-----GKEGRV 179
K N+L + L+DFG++ TR IQ + + T +MAPE K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTR----XIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
DV+S GI LIE + P E+ + LK
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 250
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 251 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 111
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 170
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 171 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 221
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 222 YRAPELIFGATDYTSSI-DVWSAGCVLAE 249
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 115
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 174
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 175 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 225
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 226 YRAPELIFGATDYTSSI-DVWSAGCVLAE 253
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 105
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 164
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 165 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 215
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 216 YRAPELIFGATDYTSSI-DVWSAGCVLAE 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 113
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 172
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 173 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 223
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 224 YRAPELIFGATDYTSSI-DVWSAGCVLAE 251
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 90
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 149
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 150 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 200
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 201 YRAPELIFGATDYTSSI-DVWSAGCVLAE 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 188 YRAPELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 82
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 141
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 142 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 192
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 193 YRAPELIFGATDYTSSI-DVWSAGCVLAE 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 257
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C +F + C +P+ R + EI++ +
Sbjct: 258 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 29/209 (13%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E+ LQ R FK + E ++M+ + H NI++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-FK--NRELQIMRKLDHCNIVR 77
Query: 61 V----ISSCSNEE--FKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ SS ++ + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 187
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 188 YRAPELIFGATDYTSSI-DVWSAGCVLAE 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + + D++SFG++L E + + + + E LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
L + D C V ++ C +P+ R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+++ +IG G FG V++A+L D E VA+K LQ R FK + E ++M+ + H NI++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKR-FK--NRELQIMRKLDHCNIVR 156
Query: 61 V------ISSCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ +E + LVL+Y+P + Y + + IY +L M + +L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 215
Query: 112 YLH-FGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIG 167
Y+H FG + H D+KP N+LLD D V L DFG AK L R ++S I ++
Sbjct: 216 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 266
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIE 194
Y APE +G S+ DV+S G +L E
Sbjct: 267 YRAPELIFGATDYTSSI-DVWSAGCVLAE 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGXK 179
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 237 D 237
D
Sbjct: 236 D 236
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSF-DVECEMMKSIHHRNII 59
F++ IG+G FG VFK +V A+K+ +L+ E ++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K S +++EY+ GS L + + D +Q ++ ++ L+YLH S
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH---SE 139
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+ IH D+K +NVLL + L+DFG+A LT D + + T +MAPE ++
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEI 205
+ D++S GI IE + P ++
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 128
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGXK 186
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 237 D 237
D
Sbjct: 243 D 243
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLSFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 179
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 237 D 237
D
Sbjct: 236 D 236
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 179
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 237 D 237
D
Sbjct: 236 D 236
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 178
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 237 D 237
D
Sbjct: 235 D 235
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 128
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 186
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 242
Query: 237 D 237
D
Sbjct: 243 D 243
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G + K L + D + + ++A+ L Y H S +VIH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 191
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 112
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 113 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 170 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ + + DFG+ + + D + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + + D++SFG++L E + + + + E LK ++D
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 248
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
L + D C V ++ C +P+ R EIV L
Sbjct: 249 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 179
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 237 D 237
D
Sbjct: 236 D 236
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 125
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 183
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 239
Query: 237 D 237
D
Sbjct: 240 D 240
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 178
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 237 D 237
D
Sbjct: 235 D 235
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 180
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 237 D 237
D
Sbjct: 237 D 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 7 LIGR-GGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
+IG G FG V+KA+ + + A KV + + + + VE +++ S H NI+K++ +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
E +++E+ G+++ + L Q I + TL+ L++ + ++IH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQ---IQVVCKQTLDALNYLHDNKIIHR 132
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY-----GKEGRV 179
DLK N+L + L+DFG++ TR I + + T +MAPE K+
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQR-RDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
DV+S GI LIE + P E+ + LK
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 124
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 182 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 114
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 127/284 (44%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ ++ + DFG+ + + D + L + +M+P
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 242
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C + + C +P+ R + EI++ +
Sbjct: 243 LLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 131
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T+ T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEM-IEGRMHDEK 186
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 8 IGRGGFGSVFKAR--LGDGMEVAVKVFNLQYGRVFKSFDVECEM-----MKSIHHRNIIK 60
IG G +G VFKAR G VA+K +Q G E+ +++ H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 61 VISSCS----NEEFK-ALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLH 114
+ C+ + E K LV E++ L YL + ++M + L++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
S +V+H DLKP N+L+ + L+DFG+A++ + T + T+ Y APE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVL 191
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW--VNDWLPISTKEIVDPNL 232
+ + D++S G + E F R+KP +F G + + D + + +E ++
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 233 -LSREDIHFVAKEQCVSFVFNV-------AMECTVESPEQRINA 268
L R+ H + + FV ++ ++C +P +RI+A
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 132/308 (42%), Gaps = 60/308 (19%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ H NI+ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH---FGYS 118
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 119 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE--DISTIQTQTLATIGYMAPE-- 172
+ + H DLK N+L+ N ++D G+A + ++ + + T YMAPE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 173 --------YGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 224
+ RV D+++FG++L E R + NG V D+ P
Sbjct: 190 DETIQVDCFDSYKRV----DIWAFGLVLWEVARRM-----VSNGI------VEDYKPPFY 234
Query: 225 KEIVDPNLLSREDIHFVA--------------KEQCVSFVFNVAMECTVESPEQRINAKE 270
V PN S ED+ V + ++ + + EC ++P R+ A
Sbjct: 235 D--VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR 292
Query: 271 IVTKLVKI 278
I L KI
Sbjct: 293 IKKTLTKI 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 8 IGRGGFGSVFKAR--LGDGMEVAVKVFNLQYGRVFKSFDVECEM-----MKSIHHRNIIK 60
IG G +G VFKAR G VA+K +Q G E+ +++ H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 61 VISSCS----NEEFK-ALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLH 114
+ C+ + E K LV E++ L YL + ++M + L++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
S +V+H DLKP N+L+ + L+DFG+A++ + T + T+ Y APE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVL 191
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW--VNDWLPISTKEIVDPNL 232
+ + D++S G + E F R+KP +F G + + D + + +E ++
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 233 -LSREDIHFVAKEQCVSFVFNV-------AMECTVESPEQRINA 268
L R+ H + + FV ++ ++C +P +RI+A
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 132
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 133 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 190 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 132/308 (42%), Gaps = 60/308 (19%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ H NI+ I+S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH---FGYS 118
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 119 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE--DISTIQTQTLATIGYMAPEYG 174
+ + H DLK N+L+ N ++D G+A + ++ + + T YMAPE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 175 KEG----------RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 224
E RV D+++FG++L E R + NG V D+ P
Sbjct: 219 DETIQVDCFDSYKRV----DIWAFGLVLWEVARRM-----VSNGI------VEDYKPPFY 263
Query: 225 KEIVDPNLLSREDIHFVA--------------KEQCVSFVFNVAMECTVESPEQRINAKE 270
V PN S ED+ V + ++ + + EC ++P R+ A
Sbjct: 264 D--VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR 321
Query: 271 IVTKLVKI 278
I L KI
Sbjct: 322 IKKTLTKI 329
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 132/308 (42%), Gaps = 60/308 (19%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
+G+G +G V++ G VAVK+F+ R KS+ E E+ ++ H NI+ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH---FGYS 118
+ L+ Y GSL YL + LD L I++ +AS L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 119 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE--DISTIQTQTLATIGYMAPE-- 172
+ + H DLK N+L+ N ++D G+A + ++ + + T YMAPE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 173 --------YGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST 224
+ RV D+++FG++L E R + NG V D+ P
Sbjct: 190 DETIQVDCFDSYKRV----DIWAFGLVLWEVARRM-----VSNGI------VEDYKPPFY 234
Query: 225 KEIVDPNLLSREDIHFVA--------------KEQCVSFVFNVAMECTVESPEQRINAKE 270
V PN S ED+ V + ++ + + EC ++P R+ A
Sbjct: 235 D--VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALR 292
Query: 271 IVTKLVKI 278
I L KI
Sbjct: 293 IKKTLTKI 300
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 8 IGRGGFGSVFKAR--LGDGMEVAVKVFNLQYGRVFKSFDVECEM-----MKSIHHRNIIK 60
IG G +G VFKAR G VA+K +Q G E+ +++ H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 61 VISSCS----NEEFK-ALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLH 114
+ C+ + E K LV E++ L YL + ++M + L++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
S +V+H DLKP N+L+ + L+DFG+A++ + T + T+ Y APE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVL 191
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW--VNDWLPISTKEIVDPNL 232
+ + D++S G + E F R+KP +F G + + D + + +E ++
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 233 -LSREDIHFVAKEQCVSFVFNV-------AMECTVESPEQRINA 268
L R+ H + + FV ++ ++C +P +RI+A
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 35/222 (15%)
Query: 2 FSENNLIGRGGFGSVFKA-RLGDGMEVAVKVFNL--------QYGRVFKSFDVECEMMKS 52
+ ++IGRG V + G E AVK+ + Q V ++ E +++
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 53 IH-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
+ H +II +I S + F LV + M G L YL + L + +IM S LE
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIM---RSLLE 211
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ F ++ ++H DLKP N+LLDDNM LSDFG + L + + T GY+AP
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL---EPGEKLRELCGTPGYLAP 268
Query: 172 E------------YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E YGKE D+++ G++L P
Sbjct: 269 EILKCSMDETHPGYGKE------VDLWACGVILFTLLAGSPP 304
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 9 GRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISS---C 65
RG FG V+KA+L + VAVK+F LQ + ++S + E + H N+++ I++
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 66 SNEEFK-ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF--------G 116
SN E + L+ + GSL YL + I+ + ++ ++ L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ + H D K NVLL ++ A L+DFG+A + T YMAPE E
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV-LE 198
Query: 177 GRVSANG------DVYSFGIMLIETFTRKKPTD 203
G ++ D+Y+ G++L E +R K D
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 54/308 (17%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
+G+G +G V++ L G VAVK+F+ R +S+ E E+ ++ H NI+ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH---FGYS 118
+ L+ Y HGSL +L L+ + L + + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 119 AQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR--EDISTIQTQTLATIGYMAPEYG 174
+ + H D K NVL+ N+ ++D G+A + ++ + + + T YMAPE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 175 KEGRVSAN-------GDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI 227
E ++ + D+++FG++L E R I NG V D+ P
Sbjct: 190 DE-QIRTDCFESYKWTDIWAFGLVLWEIARRT-----IVNGI------VEDYRPPFYD-- 235
Query: 228 VDPNLLSREDIHFV--------------AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
V PN S ED+ V A + +S + + EC +P R+ A I
Sbjct: 236 VVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKK 295
Query: 274 KLVKIRDS 281
L KI +S
Sbjct: 296 TLQKISNS 303
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 477
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 478 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 535 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKAR---LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G+ + + + + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 179
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 237 D 237
D
Sbjct: 236 D 236
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKAR---LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G+ + + + + V + E ++K ++H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 178
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 237 D 237
D
Sbjct: 235 D 235
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ ++H+NI++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 170 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 264
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 265 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 45 VECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E +M+ + + I+++I C E + LV+E G L KYL + ++ D + ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 476
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDISTIQTQTL 163
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 164 ATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMT 211
+ + APE + S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 131
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEK 186
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ ++H+NI++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 156 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 250
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 251 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 132
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 133 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEK 187
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + L+LEY P G++ + L + D + + ++A+ L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH--- 125
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE EG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEM-IEG 180
Query: 178 RVSANG-DVYSFGIMLIETFTRKKP 201
R+ D++S G++ E K P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 131
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEK 186
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM-IEGRMHDEK 191
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 148
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 149 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 203
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 204 VDLWSLGVLCYEFLVGKPP 222
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + L+LEY P G++ + L + D + + ++A+ L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH--- 129
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE EG
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEG 184
Query: 178 RVSANG-DVYSFGIMLIETFTRKKP 201
R+ D++S G++ E K P
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
+G G +G V+KA+ G VA+K L + + + E ++K +HH NI+ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
+E LV E+M L+K L + L Q I I + L + + +++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE-YGKEGRVSANGD 184
LKP N+L++ + L+DFG+A+ S T + T+ Y AP+ + S + D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 185 VYSFGIMLIETFTRK 199
++S G + E T K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + L+LEY P G++ + L + D + + ++A+ L Y H
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH--- 124
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE EG
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEG 179
Query: 178 RVSANG-DVYSFGIMLIETFTRKKP 201
R+ D++S G++ E K P
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL N ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 190
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E P
Sbjct: 191 VDLWSLGVLCYEFLVGMPP 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 189
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 131
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 186
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 191
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVISSC 65
+G G +G V+KA+ G VA+K L + + E ++K +HH NI+ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
+E LV E+M L+K L + L Q I I + L + + +++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE-YGKEGRVSANGD 184
LKP N+L++ + L+DFG+A+ S T + T+ Y AP+ + S + D
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 185 VYSFGIMLIETFTRK 199
++S G + E T K
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 189
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 28/217 (12%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNL---QYGRVFKSFDVECEMMKSIHHRN 57
FS+ IG G FG+V+ AR + + VA+K + Q ++ E ++ + H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS----TLEYL 113
I+ E LV+EY L S++ +L+++++ +++A+ L+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY 173
+ +S +IH D+K N+LL + + L DFG A ++ + + T +MAPE
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 221
Query: 174 ---GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFN 207
EG+ DV+S GI IE RK P +FN
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 255
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 28/217 (12%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNL---QYGRVFKSFDVECEMMKSIHHRN 57
FS+ IG G FG+V+ AR + + VA+K + Q ++ E ++ + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS----TLEYL 113
I+ E LV+EY L S++ +L+++++ +++A+ L+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY 173
+ +S +IH D+K N+LL + + L DFG A ++ + + T +MAPE
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEV 182
Query: 174 ---GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFN 207
EG+ DV+S GI IE RK P +FN
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 157
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 158 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 212
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 30/296 (10%)
Query: 8 IGRGGFGSV-FKARLGDGMEVAVKVFNLQ-YGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG GGF V + G VA+K+ + G E E +K++ H++I ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
+VLEY P G L Y+ S + + + R+ + + S + Y+H S H D
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRD 133
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK-EGRVSANGD 184
LKP N+L D+ L DFG+ +QT ++ Y APE + + + + D
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEAD 192
Query: 185 VYSFGIMLIETFTRKKPTDE-----IFNGEMTLKHWVNDWLPISTKEI------VDP--- 230
V+S GI+L P D+ ++ M K+ V WL S+ + VDP
Sbjct: 193 VWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKR 252
Query: 231 ----NLLSR----EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
NLL+ +D ++ + Q + ++ +C E N ++ + L+ +
Sbjct: 253 ISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTMEDLISL 308
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 38/233 (16%)
Query: 1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
++ +IG G FG VF+A+L + EVA+K LQ R FK + E ++M+ + H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQDKR-FK--NRELQIMRIVKHPNVVD 96
Query: 61 VIS------SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI------MIDVAS 108
+ + +E F LVLEY+P E +S + + Q + + M +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 109 TLEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLT--REDISTIQTQTLAT 165
+L Y+H S + H D+KP N+LLD + V L DFG AK+L ++S I ++
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--- 206
Query: 166 IGYMAPE--YGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWV 216
Y APE +G + N D++S G ++ E + +F GE + V
Sbjct: 207 --YRAPELIFGATN-YTTNIDIWSTGCVMAELMQGQP----LFPGESGIDQLV 252
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H +L N ++ + + DFG+ + + D + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + + D++SFG++L E + + + + E LK ++D
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 250
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
L + D C V ++ C +P R EIV L
Sbjct: 251 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 176
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 235 RED 237
D
Sbjct: 233 MPD 235
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 162 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 215
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 256
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 257 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 176
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 232
Query: 235 RED 237
D
Sbjct: 233 MPD 235
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 155 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 249
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 250 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 147 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 200
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 241
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 242 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 180
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 235 RED 237
D
Sbjct: 237 MPD 239
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 123
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 179
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 235 RED 237
D
Sbjct: 236 MPD 238
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 172 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 225
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 266
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 267 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 180
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 235 RED 237
D
Sbjct: 237 MPD 239
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 123
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 179
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 235 RED 237
D
Sbjct: 236 MPD 238
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 177
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 235 RED 237
D
Sbjct: 234 MPD 236
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 177
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 235 RED 237
D
Sbjct: 234 MPD 236
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYL--- 113
++ ++ +C+ +V+ E+ G+L YL S Y+ ++ D TLE+L
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL-TLEHLIXY 153
Query: 114 --------HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
F S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 154 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 177
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 235 RED 237
D
Sbjct: 234 MPD 236
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 178
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 235 RED 237
D
Sbjct: 235 MPD 237
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 156 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 250
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 251 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G + K L + D + + ++A+ L Y H S +VIH
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEM-IEGRMHDEK 191
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR
Sbjct: 137 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEX-IEGRXHDEK 191
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 125
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 181
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 237
Query: 235 RED 237
D
Sbjct: 238 MPD 240
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H +L N ++ + + DFG+ + + D + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + + D++SFG++L E + + + + E LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
L + D C V ++ C +P R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 2 FSENNL-----IGRGGFGSVFKAR-LGDGME-----VAVKVF-NLQYGRVFKSFDVECEM 49
F NNL +G G FG V +A G G E VAVK+ + + ++ E ++
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQR 99
M + H NI+ ++ +C++ ++ EY +G L +L L++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + + ++
Sbjct: 155 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 182 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 235
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 276
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 277 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR +A+KV L+ V E E+ + H N
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + L+LEY P G++ + L + D + + ++A+ L Y H
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH--- 122
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +VIH D+KP N+LL ++DFG + S+ +T T+ Y+ PE EG
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEG 177
Query: 178 RVSANG-DVYSFGIMLIETFTRKKP 201
R+ D++S G++ E K P
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 177
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 235 RED 237
D
Sbjct: 234 MPD 236
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 178
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 235 RED 237
D
Sbjct: 235 MPD 237
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 123
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 179
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 235 RED 237
D
Sbjct: 236 MPD 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ H NI+ I++
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF------ 115
+ + LV +Y HGSL YL + Y + + + + + AS L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST-----IQTQTLATIGYMA 170
G A + H DLK N+L+ N ++D G+A R D +T + T YMA
Sbjct: 126 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 171 PEY------GKEGRVSANGDVYSFGIMLIETFTR 198
PE K D+Y+ G++ E R
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 196 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 290
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 291 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L Y LD+ + +++ L YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 236
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 237 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+K++ +S + I L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 178
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 235 RED 237
D
Sbjct: 235 MPD 237
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 156 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP 209
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 250
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 251 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 25/218 (11%)
Query: 2 FSENNL-----IGRGGFGSVFKAR-LGDGME-----VAVKVF-NLQYGRVFKSFDVECEM 49
F NNL +G G FG V +A G G E VAVK+ + + ++ E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQR 99
M + H NI+ ++ +C++ ++ EY +G L +L L++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + + ++
Sbjct: 163 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ H NI+ I++
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF------ 115
+ + LV +Y HGSL YL + Y + + + + + AS L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST-----IQTQTLATIGYMA 170
G A + H DLK N+L+ N ++D G+A R D +T + T YMA
Sbjct: 125 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 171 PEY------GKEGRVSANGDVYSFGIMLIETFTR 198
PE K D+Y+ G++ E R
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 135
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ H NI+ I++
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF------ 115
+ + LV +Y HGSL YL + Y + + + + + AS L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST-----IQTQTLATIGYMA 170
G A + H DLK N+L+ N ++D G+A R D +T + T YMA
Sbjct: 128 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 171 PEY------GKEGRVSANGDVYSFGIMLIETFTR 198
PE K D+Y+ G++ E R
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ H NI+ I++
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF------ 115
+ + LV +Y HGSL YL + Y + + + + + AS L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST-----IQTQTLATIGYMA 170
G A + H DLK N+L+ N ++D G+A R D +T + T YMA
Sbjct: 131 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 171 PEY------GKEGRVSANGDVYSFGIMLIETFTR 198
PE K D+Y+ G++ E R
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + ++LE M G L+ +L SS +LD+ L++ D+A +
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 172
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 173 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 267
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 268 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 132
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ +T T+ Y+ PE EGR+
Sbjct: 133 RDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEM-IEGRMHDEK 187
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 135
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ H NI+ I++
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF------ 115
+ + LV +Y HGSL YL + Y + + + + + AS L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST-----IQTQTLATIGYMA 170
G A + H DLK N+L+ N ++D G+A R D +T + T YMA
Sbjct: 151 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 171 PEY------GKEGRVSANGDVYSFGIMLIETFTR 198
PE K D+Y+ G++ E R
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVF----KARLGDGME--VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V+ K + D E VA+K N R F E +MK + ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS------SNYIL---DIYQRLNIMIDVASTLE 111
++ S + +++E M G L+ YL S +N +L + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N + ++ + DFG+ + + D + L + +M+P
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + DV+SFG++L E T + + + E L+ +++
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 244
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
LL + D C + + C +P+ R + EI++ +
Sbjct: 245 LLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYL--- 113
++ ++ +C+ +V+ E+ G+L YL S Y+ + TLE+L
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 114 --------HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
F S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 38/284 (13%)
Query: 8 IGRGGFGSVFKARLGDGME------VAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIK 60
+G+G FG V++ D ++ VAVK N R F E +MK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS---------SNYILDIYQRLNIMIDVASTLE 111
++ S + +V+E M HG L+ YL S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
YL+ + + +H DL N ++ + + DFG+ + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN 231
E K+G + + D++SFG++L E + + + + E LK ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
L + D C V ++ C +P+ R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + + A+KV L+ V E E+ + H NI+++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKKVIH 131
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 132 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM-IEGRMHDEK 186
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSC 65
IG+G FG V++ + G EVAVK+F+ R +S+ E E+ +++ H NI+ I++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 66 SNEEFKA----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF------ 115
+ + LV +Y HGSL YL+ Y + + + + + AS L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST-----IQTQTLATIGYMA 170
G A + H DLK N+L+ N ++D G+A R D +T + T YMA
Sbjct: 164 GKPA-IAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 171 PEY------GKEGRVSANGDVYSFGIMLIETFTR 198
PE K D+Y+ G++ E R
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 138
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 168
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 169 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + +++E M G L+ +L SS +LD+ L++ D+A +
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 170 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 264
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 265 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAVK+ + L + K F E +MK ++H NI+K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV+EY G + YL + ++ + R + S ++Y H + ++H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVH 129
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + Y APE + +
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPE 186
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 187 VDVWSLGVILYTLVSGSLPFD 207
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 64/297 (21%)
Query: 8 IGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNIIK 60
+G G FG V++ ++ ++VAVK + F +E ++ +H+NI++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLH---------SSNYILDIYQRLNIMIDVASTLE 111
I + +++E M G L+ +L SS +LD+ L++ D+A +
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 112 YL---HFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
YL HF IH D+ N LL VA + DFG+A+ + R +
Sbjct: 155 YLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +M PE EG ++ D +SFG++L E F+ ++P +K
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL-------------------GYMPYPSK 249
Query: 226 EIVDPNLLSREDIHFV-------AKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++E + FV + C V+ + +C PE R N I+ ++
Sbjct: 250 S-------NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAVK+ + L + K F E +MK ++H NI+K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV+EY G + YL + + + R + S ++Y H Y ++H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVH 137
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + + Y APE + +
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFT---VGNKLDTFCGSPPYAAPELFQGKKYDGPE 194
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 35/221 (15%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDV---------ECEMMKSIHHRN 57
IG G +G V AR G +VA+K ++ +FDV E +++K H N
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 58 IIKVI----SSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
II + + EFK++ VL+ M L + +HSS + + R + + L+
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLK 173
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TREDISTIQTQTLATIGYM 169
Y+H SAQVIH DLKPSN+L+++N + DFG+A+ L + + T+ +AT Y
Sbjct: 174 YMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 170 APEYGKEGRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGE 209
APE D++S G + E R+ ++F G+
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGK 267
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 14 GSVFKARLGDGMEVAVKVFNLQYGRVFKS--FDVECEMMKSIHHRNIIKVISSCSNE--E 69
G ++K R G ++ VKV ++ KS F+ EC ++ H N++ V+ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 70 FKALVLEYMPHGSLEKYLH-SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKP 128
L+ + P+GSL LH +N+++D Q + +D A +LH H L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNS 141
Query: 129 SNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSAN---GDV 185
+V +D++ A +S + S ++APE ++ N D
Sbjct: 142 RSVXIDEDXTARISXADVK-------FSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADX 194
Query: 186 YSFGIMLIETFTRKKPTDEIFNGEMTLK 213
+SF ++L E TR+ P ++ N E+ K
Sbjct: 195 WSFAVLLWELVTREVPFADLSNXEIGXK 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G G FG V A G +VA+K+ N L + + E ++ + H +IIK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+EY + L Y+ + + + R + S +EY H +++H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 192
Query: 184 --DVYSFGIMLIETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 232
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 252
Query: 233 LSREDIHFVAKE 244
L+R IH + ++
Sbjct: 253 LNRISIHEIMQD 264
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G G FG V A G +VA+K+ N L + + E ++ + H +IIK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+EY + L Y+ + + + R + S +EY H +++H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 135
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 191
Query: 184 --DVYSFGIMLIETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 232
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 251
Query: 233 LSREDIHFVAKE 244
L+R IH + ++
Sbjct: 252 LNRISIHEIMQD 263
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L + LD+ + +++ L YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 236
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 237 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 35/221 (15%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDV---------ECEMMKSIHHRN 57
IG G +G V AR G +VA+K ++ +FDV E +++K H N
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 58 IIKVI----SSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
II + + EFK++ VL+ M L + +HSS + + R + + L+
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRY-FLYQLLRGLK 172
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TREDISTIQTQTLATIGYM 169
Y+H SAQVIH DLKPSN+L+++N + DFG+A+ L + + T+ +AT Y
Sbjct: 173 YMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 170 APEYGKEGRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGE 209
APE D++S G + E R+ ++F G+
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGK 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + L+LEY P G++ + L + D + + ++A+ L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH--- 125
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE EG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM-IEG 180
Query: 178 RVSANG-DVYSFGIMLIETFTRKKP 201
R+ D++S G++ E K P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G G FG V A G +VA+K+ N L + + E ++ + H +IIK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+EY + L Y+ + + + R + S +EY H +++H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 130
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 186
Query: 184 --DVYSFGIMLIETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 232
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 246
Query: 233 LSREDIHFVAKE 244
L+R IH + ++
Sbjct: 247 LNRISIHEIMQD 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL +++FG + S+ +T T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 189
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G G FG V A G +VA+K+ N L + + E ++ + H +IIK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+EY + L Y+ + + + R + S +EY H +++H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVH 126
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLKP N+LLD+++ ++DFG++ ++T D + ++T + + Y APE G++ A
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGP 182
Query: 184 --DVYSFGIMLIETFTRKKPTDE---------IFNGEMTLKHWVNDWLPISTKEIVDPNL 232
DV+S G++L R+ P D+ I NG TL +++ K ++ N
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 242
Query: 233 LSREDIHFVAKE 244
L+R IH + ++
Sbjct: 243 LNRISIHEIMQD 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM-IEGRMHDEK 189
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 133
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL +++FG + S+ +T T+ Y+ PE EGR+
Sbjct: 134 RDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM-IEGRMHDEK 188
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 14/241 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+ ++ +S + I L I + L+ L F +S
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 120
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+V+H DLKP N+L++ L+DFG+A+ T + T+ Y APE +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCK 178
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLSRE 236
+ D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 237 D 237
D
Sbjct: 235 D 235
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 135 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM-IEGRMHDEK 189
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 35/222 (15%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHH----- 55
F E ++G+G FG V KAR D A+K ++ + E ++ S++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVVR 66
Query: 56 --------RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMID 105
RN +K +++ + + +EY +G+L +HS N D Y RL I
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI- 125
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTL- 163
LE L + +S +IH DLKP N+ +D++ + DFG+AK + R DI + +Q L
Sbjct: 126 ----LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 164 ----------ATIGYMAPE-YGKEGRVSANGDVYSFGIMLIE 194
T Y+A E G + D+YS GI+ E
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + L+LEY P G++ + L + D + + ++A+ L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH--- 125
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +VIH D+KP N+LL ++DFG + S+ + T+ Y+ PE EG
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM-IEG 180
Query: 178 RVSANG-DVYSFGIMLIETFTRKKP 201
R+ D++S G++ E K P
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 133
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 134 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM-IEGRMHDEK 188
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 24/202 (11%)
Query: 6 NLIGRGGFGSVFKARLGD-GMEVAVKVF-NLQYGRVFKSFDV-ECEMMKSIHHRNIIKVI 62
L+G G +G V K R D G VA+K F ++ K + E +++K + H N++ ++
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 63 SSCSNEEFKALVLEYMPHGSLEKY-LHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
C ++ LV E++ H L+ L + + Q+ I + + F +S +
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----INGIGFCHSHNI 145
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE-------YG 174
IH D+KP N+L+ + V L DFG A+ L + +AT Y APE YG
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAP--GEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 175 KEGRVSANGDVYSFGIMLIETF 196
K DV++ G ++ E F
Sbjct: 204 KA------VDVWAIGCLVTEMF 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L Y LD+ + +++ L YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 236
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 237 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L Y LD+ + +++ L YL S + +
Sbjct: 106 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 220 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 264
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 265 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L Y LD+ + +++ L YL S + +
Sbjct: 83 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 241
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 242 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DG--------------MEVAVKVFN-------LQYGRV 39
F E LIG GGFG VFKA+ DG E VK + Y
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 40 FKSFDVECEM----MKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-YIL 94
+ FD + E ++S + SS S + + +E+ G+LE+++ L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 95 DIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 154
D L + + ++Y+H S ++IH DLKPSN+ L D + DFG+ L +
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND- 189
Query: 155 ISTIQTQTLATIGYMAPE------YGKEGRVSANGDVYSFGIMLIE 194
+T++ T+ YM+PE YGKE D+Y+ G++L E
Sbjct: 190 --GKRTRSKGTLRYMSPEQISSQDYGKE------VDLYALGLILAE 227
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 157
Query: 124 CDLKPSNVLLDDNMVAHLSDFGI---AKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
D+KP N+LL ++DFG A R+D+ T+ Y+ PE EGR+
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-------GTLDYLPPEM-IEGRMH 209
Query: 181 ANG-DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L Y LD+ + +++ L YL S + +
Sbjct: 80 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 194 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 238
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 239 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLGDG-MEVAVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR VA+KV ++ V E E+ +HH N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + + L+LEY P G L K L S D + IM ++A L Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC-TFDEQRTATIMEELADALMYCH--- 140
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
+VIH D+KP N+LL ++DFG + +++ +T+ T+ Y+ PE E
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSV-----HAPSLRRKTMCGTLDYLPPEM-IE 194
Query: 177 GRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGE 209
GR+ + D++ G++ E P + + E
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 5 NNLIGRGGFGSVFKA----RLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNII 59
N ++G G FG V++ G+ + VAVK K F E +MK++ H +I+
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K+I EE +++E P+G L YL + L + + + + + YL S
Sbjct: 73 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 128
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+H D+ N+L+ L DFG+++ + ED L I +M+PE R
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 187
Query: 180 SANGDVYSFGIMLIETFTRKK 200
+ DV+ F + + E + K
Sbjct: 188 TTASDVWMFAVCMWEILSFGK 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + L+LEY P G++ + L + D + + ++A+ L Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH--- 128
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGI---AKLLTREDISTIQTQTLATIGYMAPEYG 174
S +VIH D+KP N+LL ++DFG A R+D+ T+ Y+ PE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-------GTLDYLPPEM- 180
Query: 175 KEGRVSANG-DVYSFGIMLIETFTRKKP 201
EGR+ D++S G++ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 144
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 145 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L Y LD+ + +++ L YL S + +
Sbjct: 75 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 189 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 233
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 234 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 5 NNLIGRGGFGSVFKA----RLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNII 59
N ++G G FG V++ G+ + VAVK K F E +MK++ H +I+
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K+I EE +++E P+G L YL + L + + + + + YL S
Sbjct: 77 KLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 132
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+H D+ N+L+ L DFG+++ + ED L I +M+PE R
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 191
Query: 180 SANGDVYSFGIMLIETFTRKK 200
+ DV+ F + + E + K
Sbjct: 192 TTASDVWMFAVCMWEILSFGK 212
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 2 FSENNLI-----GRGGFGSVFKA-------RLGDGMEVAVKVFNLQYGRV-FKSFDVECE 48
F NL+ G G FG V KA R G VAVK+ + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 49 MMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----------- 97
++K ++H ++IK+ +CS + L++EY +GSL +L S + Y
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 98 -----QRLNIMIDVASTLEYLHFG--YSAQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAK 148
+R M D+ S + G Y A+ ++H DL N+L+ + +SDFG+++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 149 LLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PT 202
+ ED ++Q + +MA E + + DV+SFG++L E T P
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 203 DEIFN 207
+ +FN
Sbjct: 259 ERLFN 263
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 2 FSENNLI-----GRGGFGSVFKA-------RLGDGMEVAVKVFNLQYGRV-FKSFDVECE 48
F NL+ G G FG V KA R G VAVK+ + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 49 MMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----------- 97
++K ++H ++IK+ +CS + L++EY +GSL +L S + Y
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 98 -----QRLNIMIDVASTLEYLHFG--YSAQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAK 148
+R M D+ S + G Y A+ ++H DL N+L+ + +SDFG+++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 149 LLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PT 202
+ ED ++Q + +MA E + + DV+SFG++L E T P
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 203 DEIFN 207
+ +FN
Sbjct: 259 ERLFN 263
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + + VA+K N V + F E M+ H +I+K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L Y LD+ + +++ L YL S + +
Sbjct: 81 GVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 195 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 239
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 240 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 128
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 129 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIH 132
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 133 RDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM-IEGRMHDEK 187
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E K P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 5 NNLIGRGGFGSVFKA----RLGDGMEVAVKVFNLQYGRVFK-SFDVECEMMKSIHHRNII 59
N ++G G FG V++ G+ + VAVK K F E +MK++ H +I+
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
K+I EE +++E P+G L YL + L + + + + + YL S
Sbjct: 89 KLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+H D+ N+L+ L DFG+++ + ED L I +M+PE R
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 203
Query: 180 SANGDVYSFGIMLIETFTRKK 200
+ DV+ F + + E + K
Sbjct: 204 TTASDVWMFAVCMWEILSFGK 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 141
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE- 131
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 132 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L + LD+ + +++ L YL S + +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ N L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 616
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 617 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L+LEY P G++ + L + D + + ++A+ L Y H S +VIH
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIH 135
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LL N ++DFG + S+ + T+ Y+ PE EGR+
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEM-IEGRMHDEK 190
Query: 184 -DVYSFGIMLIETFTRKKP 201
D++S G++ E P
Sbjct: 191 VDLWSLGVLCYEFLVGMPP 209
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 159
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 160 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 140
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 141 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG AKLL E+ I +MA E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 40/217 (18%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNII- 59
F E LIG GGFG VFKA+ DG +K ++Y + + E + + + H NI+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIK--RVKYNN--EKAEREVKALAKLDHVNIVH 68
Query: 60 ---------------KVISSCSNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIM 103
SS S + + +E+ G+LE+++ LD L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 104 IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL 163
+ ++Y+H S ++I+ DLKPSN+ L D + DFG+ L + + ++
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSK 182
Query: 164 ATIGYMAPE------YGKEGRVSANGDVYSFGIMLIE 194
T+ YM+PE YGKE D+Y+ G++L E
Sbjct: 183 GTLRYMSPEQISSQDYGKE------VDLYALGLILAE 213
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL----DIYQRLNIM-------ID 105
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 31/280 (11%)
Query: 6 NLIGRGGFGSVFKA-RLGDG----MEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNII 59
++G G FG+V+K + DG + VA+KV + K E +M + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+++ C + LV + MP+G L ++ + L LN + +A + YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+++H DL NVL+ ++DFG+A+LL ++ I +MA E R
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 180 SANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 238
+ DV+S+G+ + E T KP D I +EI P+LL + +
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYDG-----------------IPAREI--PDLLEKGE- 238
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C V+ + ++C + E R +E+V++ ++
Sbjct: 239 RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL----DIYQRLNIM-------ID 105
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 138
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG AKLL E+ I +MA E
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG AKLL E+ I +MA E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+ ++ +S + I L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 180
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 235 RED 237
D
Sbjct: 237 MPD 239
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ H L+ ++ +S + I L I + L+ L F +S
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 121
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 177
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 233
Query: 235 RED 237
D
Sbjct: 234 MPD 236
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 2 FSENNLI-----GRGGFGSVFKA-------RLGDGMEVAVKVFNLQYGRV-FKSFDVECE 48
F NL+ G G FG V KA R G VAVK+ + E
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGY-TTVAVKMLKENASPSELRDLLSEFN 78
Query: 49 MMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----------- 97
++K ++H ++IK+ +CS + L++EY +GSL +L S + Y
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 98 -----QRLNIMIDVASTLEYLHFG--YSAQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAK 148
+R M D+ S + G Y A+ ++H DL N+L+ + +SDFG+++
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 149 LLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKK------PT 202
+ ED ++Q + +MA E + + DV+SFG++L E T P
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 203 DEIFN 207
+ +FN
Sbjct: 259 ERLFN 263
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 2 FSENNL-----IGRGGFGSVFKAR-LGDGME-----VAVKVF-NLQYGRVFKSFDVECEM 49
F NNL +G G FG V +A G G E VAVK+ + + ++ E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYL---------------HSSNYI 93
M + H NI+ ++ +C++ ++ EY +G L +L H+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 94 LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE 153
L L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 154 DISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 33/284 (11%)
Query: 5 NNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFD---VECEMMKSIHHRNIIK 60
+IG G V A E VA+K NL+ + S D E + M HH NI+
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLE--KCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 61 VISSCSNEEFKALVLEYMPHGSL--------EKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+S ++ LV++ + GS+ K H S +LD I+ +V LEY
Sbjct: 73 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVLEGLEY 131
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDIS--TIQTQTLATIGYM 169
LH IH D+K N+LL ++ ++DFG++ L T DI+ ++ + T +M
Sbjct: 132 LHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 170 APEYGKEGR-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 228
APE ++ R D++SFGI IE T P + ++ + ND + T +
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG-VQ 247
Query: 229 DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 272
D +L + F + +S C + PE+R A E++
Sbjct: 248 DKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELL 281
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAV++ + L + K F E +MK ++H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV+EY G + YL + + + R + S ++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 8 IGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRV-FKSFDVECEMMKSIHHRNIIKVISSC 65
+G G FG V G+E +K N +V + + E E++KS+ H NIIK+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNY---ILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ +V+E G L + + S+ L +M + + L Y H S V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146
Query: 123 HCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
H DLKP N+L D + + DFG+A+L ++ S T T YMAPE K V
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFKRD-V 202
Query: 180 SANGDVYSFGIML 192
+ D++S G+++
Sbjct: 203 TFKCDIWSAGVVM 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 33/284 (11%)
Query: 5 NNLIGRGGFGSVFKARLGDGME-VAVKVFNLQYGRVFKSFD---VECEMMKSIHHRNIIK 60
+IG G V A E VA+K NL+ + S D E + M HH NI+
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLE--KCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 61 VISSCSNEEFKALVLEYMPHGSL--------EKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+S ++ LV++ + GS+ K H S +LD I+ +V LEY
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG-VLDESTIATILREVLEGLEY 136
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TREDIS--TIQTQTLATIGYM 169
LH IH D+K N+LL ++ ++DFG++ L T DI+ ++ + T +M
Sbjct: 137 LHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 170 APEYGKEGR-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV 228
APE ++ R D++SFGI IE T P + ++ + ND + T +
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG-VQ 252
Query: 229 DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 272
D +L + F + +S C + PE+R A E++
Sbjct: 253 DKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELL 286
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 9 GRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISS---- 64
RG FG V+KA+L + VAVK+F +Q + +++ + E + + H NI++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF-------GY 117
S + L+ + GSL +L ++ ++ + +I +A L YLH G+
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
+ H D+K NVLL +N+ A ++DFG+A + + T YMAPE EG
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV-LEG 207
Query: 178 RVSANG------DVYSFGIMLIETFTRKKPTD 203
++ D+Y+ G++L E +R D
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRV--------FKSFDVECEMMKSI 53
F + ++GRGGFG VF + M+ K++ + ++ VE +++ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 54 HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVASTL 110
H R I+ + + + LV+ M G + ++++ + +Q + + S L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 111 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT---LATIG 167
E+LH +I+ DLKP NVLLDD+ +SD G+A ++ QT+T T G
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV-----ELKAGQTKTKGYAGTPG 354
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
+MAPE G+E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRV--------FKSFDVECEMMKSI 53
F + ++GRGGFG VF + M+ K++ + ++ VE +++ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 54 HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVASTL 110
H R I+ + + + LV+ M G + ++++ + +Q + + S L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 111 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT---LATIG 167
E+LH +I+ DLKP NVLLDD+ +SD G+A ++ QT+T T G
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV-----ELKAGQTKTKGYAGTPG 354
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
+MAPE G+E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAVK+ + L + K F E +MK ++H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV+EY G + YL + + + R + S ++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRV--------FKSFDVECEMMKSI 53
F + ++GRGGFG VF + M+ K++ + ++ VE +++ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 54 HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVASTL 110
H R I+ + + + LV+ M G + ++++ + +Q + + S L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 111 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT---LATIG 167
E+LH +I+ DLKP NVLLDD+ +SD G+A ++ QT+T T G
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV-----ELKAGQTKTKGYAGTPG 354
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
+MAPE G+E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAVK+ + L + K F E +MK ++H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV+EY G + YL + + + R + S ++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRV--------FKSFDVECEMMKSI 53
F + ++GRGGFG VF + M+ K++ + ++ VE +++ +
Sbjct: 187 FLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 54 HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI---DVASTL 110
H R I+ + + + LV+ M G + ++++ + +Q + + S L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 111 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT---LATIG 167
E+LH +I+ DLKP NVLLDD+ +SD G+A ++ QT+T T G
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV-----ELKAGQTKTKGYAGTPG 354
Query: 168 YMAPE--YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
+MAPE G+E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAVK+ + L + K F E +MK ++H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV+EY G + YL + + + R + S ++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 9/206 (4%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSF-DVECEMMKSIHHRNII 59
F++ + IG+G FG V+K EV A+K+ +L+ E ++ I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S +++EY+ GS L L+ I+ ++ L+YLH S
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLH---SE 135
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+ IH D+K +NVLL + L+DFG+A LT D + + T +MAPE K+
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEI 205
D++S GI IE + P ++
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++ G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+++ MP G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 141
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFDVECEMMK------SIH 54
F + ++G+G FG VF A + A+K L+ V DVEC M++ +
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH 114
H + + + +E V+EY+ G L ++ S + D+ + ++ L++LH
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH 136
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
S +++ DLK N+LLD + ++DFG+ K D T + T Y+APE
Sbjct: 137 ---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGTPDYIAPEIL 191
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKP-----TDEIFNGEMTLKHWVNDWLPISTKEIV 228
+ + + D +SFG++L E + P +E+F+ + WL K+++
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLL 250
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVA+K+ + L + K F E +MK ++H NI+K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ L++EY G + YL + + + R + S ++Y H +++H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + + Y APE + +
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFSNEFT---VGGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 192 VDVWSLGVILYTLVSGSLPFD 212
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 153 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG AKLL E+ I +MA E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG AKLL E+ I +MA E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + G+E A K+ N + R F+ + E + + + H NI+++ S
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
E F LV + + G L + + + + Y + + LE + + +S ++H
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHR 128
Query: 125 DLKPSNVLLDDN---MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
+LKP N+LL L+DFG+A + S T GY++PE K+ S
Sbjct: 129 NLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 186 PVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + G+E A K+ N + R F+ + E + + + H NI+++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
E F LV + + G L + + + + Y + + LE + + +S ++H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHR 129
Query: 125 DLKPSNVLLDDN---MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
+LKP N+LL L+DFG+A + S T GY++PE K+ S
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 187 PVDIWACGVIL 197
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVA+K+ + L + K F E +MK ++H NI+K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ L++EY G + YL + + + R + S ++Y H +++H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVH 137
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + Y APE + +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFSNEFT---VGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++G G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 141
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG AKLL E+ I +MA E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + G+E A K+ N + R F+ + E + + + H NI+++ S
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
E F LV + + G L + + + + Y + + LE + + +S ++H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHR 129
Query: 125 DLKPSNVLLDDN---MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
+LKP N+LL L+DFG+A + S T GY++PE K+ S
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 187 PVDIWACGVIL 197
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAV++ + L + K F E +MK ++H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV+EY G + YL + + + R + S ++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD +M ++DFG + T + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFT---FGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 144 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRNIIKVIS 63
+G G FG V R +G A+KV + K + E M+ + H II++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ + + ++++Y+ G L L S + + +V LEYLH S +I+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLKP N+LLD N ++DFG AK + + T Y+APE + +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 184 DVYSFGIMLIETFTRKKP---------TDEIFNGEMTLKHWVND 218
D +SFGI++ E P ++I N E+ + N+
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNE 228
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 190 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSSNYIL--------DIYQRLNIM----- 103
++ ++ +C+ +V+ E+ G+L YL S D+Y+ +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 104 --IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
VA +E+L S + IH DL N+LL + V + DFG+A+ + ++ +
Sbjct: 155 YSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
+ +MAPE + + DV+SFG++L E F+
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVI 62
LIG+G FG V+ R EVA+++ +++ K+F E + H N++ +
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+C + A++ +L + + +LD+ + I ++ + YLH + ++
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 123 HCDLKPSNVLLDDNMVAHLSDFG---IAKLLT---REDISTIQTQTLATIGYMAPEY--- 173
H DLK NV D+ V ++DFG I+ +L RED IQ L ++APE
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLC---HLAPEIIRQ 208
Query: 174 ----GKEGRV--SANGDVYSFGIMLIETFTRKKP 201
+E ++ S + DV++ G + E R+ P
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ L+K++ +S + I L I + L+ L F +S
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 122
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 178
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 234
Query: 235 RED 237
D
Sbjct: 235 MPD 237
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ L+K++ +S + I L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 180
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 235 RED 237
D
Sbjct: 237 MPD 239
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++ G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + G+E A K+ N + R F+ + E + + + H NI+++ S
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
E F LV + + G L + + + + Y + + LE + + +S ++H
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSNGIVHR 152
Query: 125 DLKPSNVLLDDN---MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
+LKP N+LL L+DFG+A + S T GY++PE K+ S
Sbjct: 153 NLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 210 PVDIWACGVIL 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 135/298 (45%), Gaps = 34/298 (11%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISS- 64
IG+G +G V+ + G +VAVKVF + S+ E E+ +++ H NI+ I++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 65 ---CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG-YSAQ 120
+ L+ +Y +GSL YL S+ LD L + S L +LH +S Q
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 121 ----VIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTREDISTIQTQT-LATIGYMAPEYG 174
+ H DLK N+L+ N ++D G+A K ++ + I T + T YM PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 175 KEG------RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST---- 224
E + D+YSFG++L E R+ + I E L + +D +P
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEV-ARRCVSGGIVE-EYQLPY--HDLVPSDPSYED 274
Query: 225 -KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS 281
+EIV L + + ++C+ + + EC +P R+ A + L K+ +S
Sbjct: 275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 2 FSENNLIGRGGFGSVFKARL---GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH 55
F + ++ G FG+V+K G+ +++ V + L+ + K E +M S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++ +++ C + L+ + MP G L Y+ + LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 141
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+++H DL NVL+ ++DFG+AKLL E+ I +MA E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 176 EGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMT 211
+ DV+S+G+ + E T KP D I E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 28/267 (10%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V A G +VAVK +L+ + + E +M+ HH N++ + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+E++ G+L + + ++ Q + + V L YLH + VIH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 187 SFGIMLIETFTRKKPTDEIFN-GEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ 245
S GIM+IE + P FN + + D LP K D+H V+
Sbjct: 226 SLGIMVIEMIDGEPP---YFNEPPLQAMRRIRDSLPPRVK-----------DLHKVS--- 268
Query: 246 CVSFVFNVAMECTVESPEQRINAKEIV 272
S + V P QR A+E++
Sbjct: 269 --SVLRGFLDLMLVREPSQRATAQELL 293
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L + LD+ + +++ L YL S + +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 236
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 237 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 33/278 (11%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVF-NLQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
IG G FG V + + M VA+K N V + F E M+ H +I+K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ E +++E G L +L + LD+ + +++ L YL S + +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGRVSA 181
H D+ NVL+ L DFG+++ + ED + + ++ I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 182 NGDVYSFGIMLIETFTRK-KPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF 240
DV+ FG+ + E KP + N ++ + + LP+ PN
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP------PN--------- 616
Query: 241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI 278
C ++++ +C P +R E+ +L I
Sbjct: 617 -----CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHH----- 55
F E ++G+G FG V KAR D A+K ++ + E ++ S++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVVR 66
Query: 56 --------RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMID 105
RN +K +++ + + +EY + +L +HS N D Y RL I
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI- 125
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTL- 163
LE L + +S +IH DLKP N+ +D++ + DFG+AK + R DI + +Q L
Sbjct: 126 ----LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 164 ----------ATIGYMAPE-YGKEGRVSANGDVYSFGIMLIE 194
T Y+A E G + D+YS GI+ E
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ L+K++ +S + I L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 180
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 235 RED 237
D
Sbjct: 237 MPD 239
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 41/282 (14%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 134
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 135 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H I+DPN
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLH-----------AIIDPN- 240
Query: 233 LSREDIHFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+I F E+ + V C P+QRI+ E++
Sbjct: 241 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 276
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
FS + +IGRGGFG V+ R D G A+K + + ++ + + +++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIMLS 244
Query: 61 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 108
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 109 TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGY 168
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 356
Query: 169 MAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKP 201
MAPE ++G ++ D +S G ML + P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
FS + +IGRGGFG V+ R D G A+K + + ++ + + +++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIMLS 244
Query: 61 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 108
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 109 TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGY 168
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 356
Query: 169 MAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKP 201
MAPE ++G ++ D +S G ML + P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
FS + +IGRGGFG V+ R D G A+K + K ++ +++ R ++
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIMLS 243
Query: 61 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 108
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 302
Query: 109 TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGY 168
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 355
Query: 169 MAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKP 201
MAPE ++G ++ D +S G ML + P
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 150
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 151 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H + D EI P+
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID----PNHEIEFPD- 263
Query: 233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+ +D+ V K C C P+QRI+ E++
Sbjct: 264 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 292
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 28/214 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
FS + +IGRGGFG V+ R D G A+K + + ++ + + +++ R ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL------ALNERIMLS 244
Query: 61 VISS-------CSNEEFK-----ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 108
++S+ C + F + +L+ M G L +L + R ++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIIL 303
Query: 109 TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGY 168
LE++H + V++ DLKP+N+LLD++ +SD G+A +++ ++ T GY
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGY 356
Query: 169 MAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKP 201
MAPE ++G ++ D +S G ML + P
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 130
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 131 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H + D EI P+
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID----PNHEIEFPD- 243
Query: 233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+ +D+ V K C C P+QRI+ E++
Sbjct: 244 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 272
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 5 NNLIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFDVECEMMK------SIHHRN 57
+ ++G+G FG VF A + A+K L+ V DVEC M++ + H
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ + + +E V+EY+ G L ++ S + D+ + ++ L++LH
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH--- 135
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +++ DLK N+LLD + ++DFG+ K D T T Y+APE
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGTPDYIAPEILLGQ 193
Query: 178 RVSANGDVYSFGIMLIETFTRKKP-----TDEIFNGEMTLKHWVNDWLPISTKEIV 228
+ + + D +SFG++L E + P +E+F+ + WL K+++
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLL 249
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 2 FSENNL-----IGRGGFGSVFKAR-LGDGME-----VAVKVF-NLQYGRVFKSFDVECEM 49
F NNL +G G FG V +A G G E VAVK+ + + ++ E ++
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH-------------------- 88
M + H NI+ ++ +C++ ++ EY +G L +L
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 89 --SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI 146
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 147 AKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT 197
A+ + + ++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 41/282 (14%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 178
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H I+DPN
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLH-----------AIIDPN- 284
Query: 233 LSREDIHFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+I F E+ + V C P+QRI+ E++
Sbjct: 285 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 320
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI 62
+IGRG FG V R +V ++ + +S F E ++M + ++++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+ ++ + +V+EYMP G L + SNY + + + R +V L+ +H S
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 189
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE----YGKEG 177
IH D+KP N+LLD + L+DFG + +E + T + T Y++PE G +G
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 248
Query: 178 RVSANGDVYSFGIMLIETFTRKKP 201
D +S G+ L E P
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI 62
+IGRG FG V R +V ++ + +S F E ++M + ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+ ++ + +V+EYMP G L + SNY + + + R +V L+ +H S
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE----YGKEG 177
IH D+KP N+LLD + L+DFG + +E + T + T Y++PE G +G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 178 RVSANGDVYSFGIMLIETFTRKKP 201
D +S G+ L E P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + ++ LE +H + ++H
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 131
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 132 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H I+DPN
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLH-----------AIIDPN- 237
Query: 233 LSREDIHFV-AKEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+I F E+ + V C P+QRI+ E++
Sbjct: 238 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI 62
+IGRG FG V R +V ++ + +S F E ++M + ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+ ++ + +V+EYMP G L + SNY + + + R +V L+ +H S
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGF 194
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE----YGKEG 177
IH D+KP N+LLD + L+DFG + +E + T + T Y++PE G +G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 178 RVSANGDVYSFGIMLIETFTRKKP 201
D +S G+ L E P
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFNLQYGRV-FKSFDVECEMMKSIHHRNIIKVI 62
+G G FGSV ++ R ++VA+KV + + E ++M + + I+++I
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
C E LV+E G L K+L + + ++ V+ ++YL +
Sbjct: 77 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED-ISTIQTQTLATIGYMAPEYGKEGRVSA 181
H DL NVLL + A +SDFG++K L +D T ++ + + APE + S+
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 182 NGDVYSFGIMLIETFTR-KKPTDEIFNGEM 210
DV+S+G+ + E + +KP ++ E+
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 134/292 (45%), Gaps = 37/292 (12%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 179
Query: 179 VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 238
S D++S G+ L+E + P P KE P + E +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIP-----------------PPDAKEDSRPPMAIFELL 222
Query: 239 HFVAKE---QCVSFVFNVAME-----CTVESPEQRINAKEI-VTKLVKIRDS 281
++ E + S VF++ + C +++P +R + K++ V +K D+
Sbjct: 223 DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 274
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + ++ LE +H + ++H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 178
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + S ++ + T+ YM PE K+ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H I+DPN
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLH-----------AIIDPN- 284
Query: 233 LSREDIHFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+I F E+ + V C P+QRI+ E++
Sbjct: 285 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 320
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ L+ ++ +S + I L I + L+ L F +S
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 123
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 179
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRA----LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 235
Query: 235 RED 237
D
Sbjct: 236 MPD 238
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 18/243 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNL--QYGRVFKSFDVECEMMKSIHHRNI 58
F + IG G +G V+KAR G VA+K L + V + E ++K ++H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+K++ E LV E++ L+ ++ +S + I L I + L+ L F +S
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDASA-LTGIPLPL-IKSYLFQLLQGLAFCHS 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGYMAPEYGKE 176
+V+H DLKP N+L++ L+DFG+A+ ++T + T+ Y APE
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG----VPVRTYXHEVVTLWYRAPEILLG 180
Query: 177 GRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-EIVDPNLLS 234
+ + D++S G + E TR+ +F G+ + + + T E+V P + S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS 236
Query: 235 RED 237
D
Sbjct: 237 MPD 239
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 23/246 (9%)
Query: 7 LIGRGGFGSVFKARLGDG--------MEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI 58
++G+GG+G VF+ R G M+V K ++ + E +++ + H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ +I + L+LEY+ G L L ++ + +++ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---Q 139
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+I+ DLKP N++L+ L+DFG+ K + T+ TI YMAPE
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHXFCGTIEYMAPEILMRSG 197
Query: 179 VSANGDVYSFGIMLIETFT---------RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 229
+ D +S G ++ + T RKK D+I ++ L ++ K+++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 230 PNLLSR 235
N SR
Sbjct: 258 RNAASR 263
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 8 IGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRVFKSFDV------ECEMMKSIHHRNIIK 60
+G G FG V +VA+K + Q + K D+ E +K + H +IIK
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQ---LLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ + +V+EY G L Y+ + + R + +EY H +
Sbjct: 74 LYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH---RHK 128
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
++H DLKP N+LLDDN+ ++DFG++ ++T D + ++T + + Y APE G++
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-INGKLY 184
Query: 181 ANG--DVYSFGIMLIETFTRKKPTDEIF 206
A DV+S GI+L + P D+ F
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 6 NLIGRGGFGSVFKARLGDGMEV----AVKVFNLQYGRVFKSF--DVECEMMKSIHHRNII 59
++G+G FG VF + G + A+KV +V +E +++ ++H I+
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASTLEYLHFGYS 118
K+ + E L+L+++ G L + S ++ + + + ++A L++LH S
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH---S 145
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
+ + D +SFG+++ E T P
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 23/246 (9%)
Query: 7 LIGRGGFGSVFKARLGDG--------MEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI 58
++G+GG+G VF+ R G M+V K ++ + E +++ + H I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ +I + L+LEY+ G L L ++ + +++ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---Q 139
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+I+ DLKP N++L+ L+DFG+ K + T+ TI YMAPE
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHTFCGTIEYMAPEILMRSG 197
Query: 179 VSANGDVYSFGIMLIETFT---------RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD 229
+ D +S G ++ + T RKK D+I ++ L ++ K+++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 230 PNLLSR 235
N SR
Sbjct: 258 RNAASR 263
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 2 FSENNLIGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
++ N IGRG +G V + G + A K + F E E+MKS+ H NII+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 61 VISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + + LV+E G L E+ +H + R IM DV S + Y H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KL 125
Query: 120 QVIHCDLKPSNVL-LDDNMVAHLS--DFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
V H DLKP N L L D+ + L DFG+A R + + T Y++P+ E
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQV-LE 181
Query: 177 GRVSANGDVYSFGIML------IETFTRKKPTD-----EIFNGEMTLKHWVNDWLPISTK 225
G D +S G+M+ F+ PTD +I G T DWL +S +
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFS--APTDXEVMLKIREGTFTFPE--KDWLNVSPQ 237
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 6 NLIGRGGFGSVFKARLGDGMEV----AVKVFNLQYGRVFKSF--DVECEMMKSIHHRNII 59
++G+G FG VF + G + A+KV +V +E +++ ++H I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASTLEYLHFGYS 118
K+ + E L+L+++ G L + S ++ + + + ++A L++LH S
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
+ + D +SFG+++ E T P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 6 NLIGRGGFGSVFKARLGDGMEV----AVKVFNLQYGRVFKSF--DVECEMMKSIHHRNII 59
++G+G FG VF + G + A+KV +V +E +++ ++H I+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASTLEYLHFGYS 118
K+ + E L+L+++ G L + S ++ + + + ++A L++LH S
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
+ + D +SFG+++ E T P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V AR G +VAVK+ +L+ + + E +M+ H N++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
E +++E++ G+L + S L+ Q + V L YLH + VIH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++ D+ + + T +MAPE + D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISK-DVPK-RKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 187 SFGIMLIETFTRKKP 201
S GIM+IE + P
Sbjct: 226 SLGIMVIEMVDGEPP 240
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Query: 6 NLIGRGGFGSVFK----ARLGDGMEVAVKVFNLQYGRVFKSF--DVECEMMKSIHHRNII 59
++G+G FG VF R G A+KV +V +E +++ ++H ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNI-MIDVASTLEYLHFGYS 118
K+ + E L+L+++ G L + S ++ + + + ++A L++LH S
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALGLDHLH---S 148
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+I+ DLKP N+LLD+ L+DFG++K D T+ YMAPE
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
S + D +S+G+++ E T P
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 2 FSENNLIGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
++ N IGRG +G V + G + A K + F E E+MKS+ H NII+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 61 VISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + + LV+E G L E+ +H + R IM DV S + Y H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KL 142
Query: 120 QVIHCDLKPSNVL-LDDNMVAHLS--DFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
V H DLKP N L L D+ + L DFG+A R + + T Y++P+ E
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGKMMRTKVGTPYYVSPQV-LE 198
Query: 177 GRVSANGDVYSFGIML------IETFTRKKPTD-----EIFNGEMTLKHWVNDWLPISTK 225
G D +S G+M+ F+ PTD +I G T DWL +S +
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFS--APTDXEVMLKIREGTFTFPE--KDWLNVSPQ 254
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 39/281 (13%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + + LE +H + ++H
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYW---KNMLEAVHTIHQHGIVH 150
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + ++ + T+ YM PE K+ S N
Sbjct: 151 SDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H + D EI P+
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID----PNHEIEFPD- 263
Query: 233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+ +D+ V K C C P+QRI+ E++
Sbjct: 264 IPEKDLQDVLK--C----------CLKRDPKQRISIPELLA 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 10/198 (5%)
Query: 8 IGRGGFGSVFKARLGDGME-VAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVISS 64
IG G +G+VFKA+ + E VA+K L V S E ++K + H+NI+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+++ LV E+ L+KY S N LD + + + L+ L F +S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV-SANG 183
DLKP N+L++ N L+DFG+A+ + + T+ Y P+ ++ S +
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 184 DVYSFGIMLIETFTRKKP 201
D++S G + E +P
Sbjct: 184 DMWSAGCIFAELANAARP 201
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 17/234 (7%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI- 62
IGRG F +V+K L V V LQ ++ KS F E E +K + H NI++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 63 ---SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
S+ ++ LV E G+L+ YL + I + + L++LH +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLH-TRTP 150
Query: 120 QVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+IH DLK N+ + + + D G+A L ++ + T + APE +E +
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFXAPEXYEE-K 205
Query: 179 VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
+ DVY+FG +E T + P E N + + P S ++ P +
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDV---ECEMMKSIHHRN 57
F + ++G+GGFG V ++ G A K + + K + E ++++ ++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL-HSSNYILDIYQRLNIMIDVASTLEYLHFG 116
++ + + ++ LVL M G L+ ++ H + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL----ATIGYMAPE 172
++++ DLKP N+LLDD+ +SD G+A + + QT+ T+GYMAPE
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLA-------VHVPEGQTIKGRVGTVGYMAPE 355
Query: 173 YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
K R + + D ++ G +L E + P
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEM-----MKSIHHRNIIKV 61
IG G +G+V+KAR G VA+K + G E+ +++ H N++++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 62 ISSCS----NEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHF 115
+ C+ + E K LV E++ L YL + L ++M L++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+ ++H DLKP N+L+ L+DFG+A++ + + + T+ Y APE
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYRAPEVLL 184
Query: 176 EGRVSANGDVYSFGIMLIETFTRKK 200
+ + D++S G + E F RK
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G G FG V + G K N Y + E +M +HH +I + +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
++ L+LE++ G L + + +Y + + +N M L+++H ++H D+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDI 175
Query: 127 KPSNVLLDDNMVAHLS--DFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGD 184
KP N++ + + + DFG+A L ++I + T AT + APE V D
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKV---TTATAEFAAPEIVDREPVGFYTD 232
Query: 185 VYSFGIM 191
+++ G++
Sbjct: 233 MWAIGVL 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDV---ECEMMKSIHHRN 57
F + ++G+GGFG V ++ G A K + + K + E ++++ ++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYL-HSSNYILDIYQRLNIMIDVASTLEYLHFG 116
++ + + ++ LVL M G L+ ++ H + + ++ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH-- 303
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL----ATIGYMAPE 172
++++ DLKP N+LLDD+ +SD G+A + + QT+ T+GYMAPE
Sbjct: 304 -RERIVYRDLKPENILLDDHGHIRISDLGLA-------VHVPEGQTIKGRVGTVGYMAPE 355
Query: 173 YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
K R + + D ++ G +L E + P
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHH----- 55
F E ++G+G FG V KAR D A+K ++ + E ++ S++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVXLLASLNHQYVVR 66
Query: 56 --------RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMID 105
RN +K ++ + + EY + +L +HS N D Y RL I
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI- 125
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTL- 163
LE L + +S +IH +LKP N+ +D++ + DFG+AK + R DI + +Q L
Sbjct: 126 ----LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 164 ----------ATIGYMAPE-YGKEGRVSANGDVYSFGIMLIE 194
T Y+A E G + D YS GI+ E
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 127
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I + + + T YM+PE +
Sbjct: 128 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMANEFVGTRSYMSPERLQGTH 182
Query: 179 VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 238
S D++S G+ L+E + P + E+ L + VN+ P + S E
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPPKLPSAV-----FSLEFQ 236
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEI-VTKLVKIRDS 281
FV K C +++P +R + K++ V +K D+
Sbjct: 237 DFVNK-------------CLIKNPAERADLKQLMVHAFIKRSDA 267
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEM-----MKSIHHRNIIKV 61
IG G +G+V+KAR G VA+K + G E+ +++ H N++++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 62 ISSCS----NEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHF 115
+ C+ + E K LV E++ L YL + L ++M L++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+ ++H DLKP N+L+ L+DFG+A++ + + + T+ Y APE
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRAPEVLL 184
Query: 176 EGRVSANGDVYSFGIMLIETFTRKK 200
+ + D++S G + E F RK
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 41/282 (14%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSI--HHRNIIKVIS 63
IG GG VF+ A+K NL+ + S+ E + + H II++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+++ +V+E + L +L I D ++R + ++ LE +H + ++H
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 178
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS-AN 182
DLKP+N L+ D M+ L DFGIA + + S ++ + + YM PE K+ S N
Sbjct: 179 SDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSREN 237
Query: 183 G----------DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
G DV+S G +L K P +I N +++ H I+DPN
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLH-----------AIIDPN- 284
Query: 233 LSREDIHFVA-KEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
+I F E+ + V C P+QRI+ E++
Sbjct: 285 ---HEIEFPDIPEKDLQDVLKC---CLKRDPKQRISIPELLA 320
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI 62
+IGRG FG V R +V ++ + +S F E ++M + ++++
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ ++++ +V+EYMP G L + SNY + +V L+ +H S +I
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGLI 196
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE----YGKEGR 178
H D+KP N+LLD + L+DFG + + T + T Y++PE G +G
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AVGTPDYISPEVLKSQGGDGY 255
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
D +S G+ L E P
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 2 FSENNLIGRGGFGSVFKA-RLGDGMEVAVK--------VFNLQYGRVFKSFDVECEMMKS 52
F +L+G G +G V A G VA+K +F L+ R E +++K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKILKH 65
Query: 53 IHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---SSNYILDIYQRLNIMIDVAST 109
H NII + + + F+ Y+ ++ LH S+ + D + I + T
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH----IQYFIYQT 121
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ--------TQ 161
L + + + VIH DLKPSN+L++ N + DFG+A+++ + T+
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 162 TLATIGYMAPEYG-KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG 208
+AT Y APE + S DV+S G +L E F R+ IF G
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP----IFPG 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 24/228 (10%)
Query: 7 LIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMK------SIHHRNII 59
++G+G FG V AR+ + G AVKV L+ + + DVEC M + + +H +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
++ + V+E++ G L ++ S + R ++ S L +LH
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH---DK 143
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+I+ DLK NVLLD L+DFG+ K ++T T Y+APE +E
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT--ATFCGTPDYIAPEILQEMLY 201
Query: 180 SANGDVYSFGIMLIETFTRKKP-----TDEIF----NGEMTLKHWVND 218
D ++ G++L E P D++F N E+ W+++
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG+G F V + +L G E A K+ N + R + + E + + + H NI+++ S
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S E F LV + + G L + + + Y Y + + LE + + V+H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 127
Query: 125 DLKPSNVLLDDN---MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
DLKP N+LL L+DFG+A + + T GY++PE ++
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 186 PVDIWACGVIL 196
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEM-----MKSIHHRNIIKV 61
IG G +G+V+KAR G VA+K + G E+ +++ H N++++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 62 ISSC----SNEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEYLHF 115
+ C ++ E K LV E++ L YL + L ++M L++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+ ++H DLKP N+L+ L+DFG+A++ + + + T+ Y APE
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVTLWYRAPEVLL 184
Query: 176 EGRVSANGDVYSFGIMLIETFTRKK 200
+ + D++S G + E F RK
Sbjct: 185 QSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 128/275 (46%), Gaps = 26/275 (9%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 143
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 144 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 198
Query: 179 VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI 238
S D++S G+ L+E + P +G M + + D++ + + S E
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGS-GSGSMAIFELL-DYIVNEPPPKLPSGVFSLEFQ 256
Query: 239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT 273
FV K C +++P +R + K+++
Sbjct: 257 DFVNK-------------CLIKNPAERADLKQLMV 278
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 95/224 (42%), Gaps = 26/224 (11%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEM------MKSIHHRNIIK 60
+IG+G FG V AR EV V LQ + K + + M +K++ H ++
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ S + VL+Y+ G L +L L+ R ++AS L YLH S
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLN 159
Query: 121 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL--ATIGYMAPEYGKEGR 178
+++ DLKP N+LLD L+DFG+ K E+I T + T Y+APE +
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 179 VSANGDVYSFGIMLIETFTRKKP---------TDEIFNGEMTLK 213
D + G +L E P D I N + LK
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 2 FSENNLIGRGGFGSVFKA-RLGDGMEVAVK--------VFNLQYGRVFKSFDVECEMMKS 52
F +L+G G +G V A G VA+K +F L+ R E +++K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKILKH 65
Query: 53 IHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---SSNYILDIYQRLNIMIDVAST 109
H NII + + + F+ Y+ ++ LH S+ + D + I + T
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH----IQYFIYQT 121
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ--------TQ 161
L + + + VIH DLKPSN+L++ N + DFG+A+++ + T+
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 162 TLATIGYMAPEYG-KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG 208
+AT Y APE + S DV+S G +L E F R+ IF G
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP----IFPG 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 8 IGRGGFGSV----FKARLGDGMEVAVKVFNLQYGRV-FKSFDVECEMMKSIHHRNIIKVI 62
+G G FGSV ++ R ++VA+KV + + E ++M + + I+++I
Sbjct: 344 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
C E LV+E G L K+L + + ++ V+ ++YL +
Sbjct: 403 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 458
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED-ISTIQTQTLATIGYMAPEYGKEGRVSA 181
H +L NVLL + A +SDFG++K L +D T ++ + + APE + S+
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 182 NGDVYSFGIMLIETFTR-KKPTDEIFNGEM 210
DV+S+G+ + E + +KP ++ E+
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 11/218 (5%)
Query: 2 FSENNLIGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + +G G + +V+K G+ VA+K L S + E +MK + H NI+
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMID---VASTLEYLHFG 116
++ E LV E+M L+KY+ S + + + L + + L+ L F
Sbjct: 67 RLYDVIHTENKLTLVFEFM-DNDLKKYMDSRT-VGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ +++H DLKP N+L++ L DFG+A+ ++T ++ + T+ Y AP+
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSE-VVTLWYRAPDVLMG 182
Query: 177 GRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
R S + D++S G +L E T KP N E LK
Sbjct: 183 SRTYSTSIDIWSCGCILAEMIT-GKPLFPGTNDEEQLK 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVA---VKVFNLQYGRVFKSFDVECEM-----MKSIHHRNI 58
IG G +G+V+KAR G VA V+V N G E+ +++ H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 59 IKVISSC----SNEEFK-ALVLEYMPHGSLEKYLHSSNYI-LDIYQRLNIMIDVASTLEY 112
++++ C ++ E K LV E++ L YL + L ++M L++
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE 172
LH + ++H DLKP N+L+ L+DFG+A++ + + T + T+ Y APE
Sbjct: 136 LH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTLWYRAPE 189
Query: 173 YGKEGRVSANGDVYSFGIMLIETFTRKK 200
+ + D++S G + E F RK
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 11/193 (5%)
Query: 3 SENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
S+ ++G G FG V K G+++A K+ + + + E +M + H N+I++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
+ ++ LV+EY+ G L + +Y L + M + + ++H Y +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---I 208
Query: 122 IHCDLKPSNVLL--DDNMVAHLSDFGIAKLL-TREDISTIQTQTLATIGYMAPEYGKEGR 178
+H DLKP N+L D + DFG+A+ RE + T ++APE
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV----NFGTPEFLAPEVVNYDF 264
Query: 179 VSANGDVYSFGIM 191
VS D++S G++
Sbjct: 265 VSFPTDMWSVGVI 277
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + + + L+LE+ P G L K L D + M ++A L Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH--- 132
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
+VIH D+KP N+L+ ++DFG + S + T+ Y+ PE +
Sbjct: 133 ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTD 203
D++ G++ E P D
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 12/200 (6%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
+G+G FG+V+ AR + A+KV L+ V E E+ + H NI+++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ + L+LE+ P G L K L D + M ++A L Y H +VIH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH---ERKVIH 137
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+L+ ++DFG + S + T+ Y+ PE +
Sbjct: 138 RDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 184 DVYSFGIMLIETFTRKKPTD 203
D++ G++ E P D
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 42/229 (18%)
Query: 1 GFSEN----NLIGRGGFGSVFKARLGDGM--EVAVKVFNLQYGRVFKSFDV--------- 45
GF EN ++GRG SV + + E AVK+ ++ G F + +V
Sbjct: 1 GFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 46 ECEMMKSIH-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E ++++ + H NII++ + F LV + M G L YL + L + IM
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 118
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA 164
+ + LH ++H DLKP N+LLDD+M L+DFG + L D +
Sbjct: 119 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCG 172
Query: 165 TIGYMAPE------------YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
T Y+APE YGKE D++S G+++ P
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 42/229 (18%)
Query: 1 GFSEN----NLIGRGGFGSVFKARLGDGM--EVAVKVFNLQYGRVFKSFDV--------- 45
GF EN ++GRG SV + + E AVK+ ++ G F + +V
Sbjct: 14 GFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72
Query: 46 ECEMMKSIH-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E ++++ + H NII++ + F LV + M G L YL + L + IM
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 131
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA 164
+ + LH ++H DLKP N+LLDD+M L+DFG + L D +
Sbjct: 132 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCG 185
Query: 165 TIGYMAPE------------YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
T Y+APE YGKE D++S G+++ P
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 10/198 (5%)
Query: 8 IGRGGFGSVFKARLGDGME-VAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVISS 64
IG G +G+VFKA+ + E VA+K L V S E ++K + H+NI+++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+++ LV E+ L+KY S N LD + + + L+ L F +S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV-SANG 183
DLKP N+L++ N L++FG+A+ + + T+ Y P+ ++ S +
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 184 DVYSFGIMLIETFTRKKP 201
D++S G + E +P
Sbjct: 184 DMWSAGCIFAELANAGRP 201
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVF---NLQYGRVFKSFDVECEMMKSIHHRN 57
F +G+G FG+V+ AR + A+KV L+ V E E+ + H N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+++ + + + L+LE+ P G L K L D + M ++A L Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH--- 131
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
+VIH D+KP N+L+ ++DFG + S + T+ Y+ PE +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 178 RVSANGDVYSFGIMLIETFTRKKPTD 203
D++ G++ E P D
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 28/217 (12%)
Query: 5 NNLIGRGGFGSVFKARLGD-GMEVAVKVFN-LQYGRVFKSFDVECEMMKSIHHRNIIKV- 61
++++G+G +VF+ R G A+KVFN + + R E E++K ++H+NI+K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 62 -ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
I + K L++E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 119 AQVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLTRED--ISTIQTQTLATIGYMAPE 172
++H ++KP N++ D V L+DFG A+ L ++ +S T+ Y+ P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE-----YLHPD 185
Query: 173 Y--------GKEGRVSANGDVYSFGIMLIETFTRKKP 201
+ + A D++S G+ T P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 4 ENNLIGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKV 61
+ +++G G V L E AVK+ Q G + E EM+ HRN++++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
I E+ LV E M GS+ ++H + ++ + ++ DVAS L++LH + +
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGI 132
Query: 122 IHCDLKPSNVLLD-DNMVA--HLSDFGIAK-LLTREDISTIQTQTLAT----IGYMAPE- 172
H DLKP N+L + N V+ + DFG+ + D S I T L T YMAPE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 173 ---YGKEGRV-SANGDVYSFGIML 192
+ +E + D++S G++L
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 151
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 152 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 206
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
S D++S G+ L+E + P
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 5 NNLIGRGGFGSVFKAR-LGDGMEVAVKVFN-LQYGRVFKSFDVECEMMKSIHHRNIIKV- 61
++++G+G +VF+ R G A+KVFN + + R E E++K ++H+NI+K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 62 -ISSCSNEEFKALVLEYMPHGSLEKYLH--SSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
I + K L++E+ P GSL L S+ Y L + L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 119 AQVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY- 173
++H ++KP N++ D V L+DFG A+ L ED T Y+ P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQF-VXLYGTEEYLHPDMY 187
Query: 174 -------GKEGRVSANGDVYSFGIMLIETFTRKKP 201
+ + A D++S G+ T P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 179
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
S D++S G+ L+E + P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 186
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 187 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 241
Query: 179 VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTL 212
S D++S G+ L+E + P E+ L
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 275
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 179
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
S D++S G+ L+E + P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 179
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
S D++S G+ L+E + P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 2 FSENNLIGRGGFGSVFK-ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + + +G G G VFK + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN-IMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + Q L + I V L YL +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE--QILGKVSIAVIKGLTYLREKH- 124
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+++H D+KPSN+L++ L DFG++ L I ++ + T YM+PE +
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPERLQGTH 179
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
S D++S G+ L+E + P
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 42/229 (18%)
Query: 1 GFSEN----NLIGRGGFGSVFKARLGDGM--EVAVKVFNLQYGRVFKSFDV--------- 45
GF EN ++GRG SV + + E AVK+ ++ G F + +V
Sbjct: 14 GFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72
Query: 46 ECEMMKSIH-HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI 104
E ++++ + H NII++ + F LV + M G L YL + L + IM
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMR 131
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA 164
+ + LH ++H DLKP N+LLDD+M L+DFG + L D
Sbjct: 132 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLRSVCG 185
Query: 165 TIGYMAPE------------YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
T Y+APE YGKE D++S G+++ P
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 8 IGRGGFG-SVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
IG G FG ++ DG + +K N+ + + E ++ ++ H NI++ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYIL-DIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+V++Y G L K +++ +L Q L+ + + L+++H +++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILH 148
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ--TQTLATIGYMAPEYGKEGRVSA 181
D+K N+ L + L DFGIA++L ST++ + T Y++PE + +
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLN----STVELARACIGTPYYLSPEICENKPYNN 204
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS 223
D+++ G +L E T K + + LK + P+S
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS 246
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 36/228 (15%)
Query: 2 FSENNLIGRGGFGSVFKA-RLGDGMEVAVK--------VFNLQYGRVFKSFDVECEMMKS 52
F +L+G G +G V A G VA+K +F L+ R E +++K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKILKH 65
Query: 53 IHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH---SSNYILDIYQRLNIMIDVAST 109
H NII + + + F+ Y+ ++ LH S+ + D + I + T
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH----IQYFIYQT 121
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TREDISTIQTQT----- 162
L + + + VIH DLKPSN+L++ N + DFG+A+++ + D S Q
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 163 -LATIGYMAPEYG-KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG 208
+AT Y APE + S DV+S G +L E F R+ IF G
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP----IFPG 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLAT 165
VA +E+L S + IH DL N+LL +N V + DFG+A+ + + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 166 IGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK 225
+ +MAPE + S DV+S+G++L E F+ G P
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGGS-----------PYPGV 305
Query: 226 EIVDPNLLS--REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
++ D + S RE + A E ++ + ++C P++R E+V KL
Sbjct: 306 QM-DEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRV---FKSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G +K+ E +++ I HH N
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKM--LKEGATASEYKALMTELKILTHIGHHLN 92
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHS 89
++ ++ +C+ + +V+ EY +G+L YL S
Sbjct: 93 VVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKS 125
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVIS 63
IG+G F V AR + G EVAVK+ + L + K F E + K ++H NI+K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
E+ LV EY G + YL + + R + S ++Y H + ++H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
DLK N+LLD + ++DFG + T Y APE + +
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFT---FGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 184 -DVYSFGIMLIETFTRKKPTD 203
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 125
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + ++ G E A K+ N + R + + E + + + H NI+++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S E F LV + + G L + + + Y Y + + LE ++ + ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 125 DLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
DLKP N+LL L+DFG+A + + + T GY++PE ++
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGK 185
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 186 PVDMWACGVIL 196
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 26/240 (10%)
Query: 8 IGRGGFGSVFK--ARLGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNIIKVISS 64
+G G + +V+K ++L D + VA+K L++ + E ++K + H NI+ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
E+ LV EY+ L++YL I++++ N+ + + L L + + +V+H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH---NVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT----LATIGYMAPE-YGKEGRV 179
DLKP N+L+++ L+DFG+A+ +I T+T + T+ Y P+
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR------AKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEIVDPNLLSRED 237
S D++ G + E T + +F G + H++ L T+E P +LS E+
Sbjct: 179 STQIDMWGVGCIFYEMATGRP----LFPGSTVEEQLHFIFRILGTPTEETW-PGILSNEE 233
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 125
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 125
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + ++ G E A K+ N + R + + E + + + H NI+++ S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S E F LV + + G L + + + Y Y + + LE ++ + ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 125 DLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
DLKP N+LL L+DFG+A + + + T GY++PE ++
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGK 185
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 186 PVDMWACGVIL 196
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 128
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F IG G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EYMP G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F IG G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EYMP G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 144
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
S +I+ DLKP N+L+D ++DFG AK + +T TL T Y+APE
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILS 198
Query: 177 GRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 199 KGYNKAVDWWALGVLIYE 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F + +G G G V K + G+ +A K+ +L+ ++ + E +++ + I+
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD-IYQRLNIMIDVASTLEYLHFGYS 118
+ ++ ++ +E+M GSL++ L + I + I +++I V L YL +
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKH- 134
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
Q++H D+KPSN+L++ L DFG++ L I ++ + T YMAPE +
Sbjct: 135 -QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMAPERLQGTH 189
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
S D++S G+ L+E + P
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI 62
IG G +G K R DG + K L YG + ++ E +++ + H NI++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 63 SSCSNEEFKAL--VLEYMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASTLEYLHFGY 117
+ L V+EY G L + LD L +M + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 118 SA--QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
V+H DLKP+NV LD L DFG+A++L + ++ + T YM+PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKAFVGTPYYMSPEQMN 189
Query: 176 EGRVSANGDVYSFGIMLIE 194
+ D++S G +L E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI 62
IG G +G K R DG + K L YG + ++ E +++ + H NI++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 63 SSCSNEEFKAL--VLEYMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASTLEYLHFGY 117
+ L V+EY G L + LD L +M + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 118 SA--QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
V+H DLKP+NV LD L DFG+A++L D S +T + T YM+PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKT-FVGTPYYMSPEQMN 189
Query: 176 EGRVSANGDVYSFGIMLIE 194
+ D++S G +L E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMK-SIHHRNIIK 60
F +++G G G++ + D +VAVK F D E ++++ S H N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIR 82
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ + +F+ + +E + +L++Y+ ++ + + ++ S L +LH S
Sbjct: 83 YFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 121 VIHCDLKPSNVLLD-----DNMVAHLSDFGIAKLLT--REDISTIQTQTLATIGYMAPE 172
++H DLKP N+L+ + A +SDFG+ K L R S ++ T G++APE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-RSGVPGTEGWIAPE 196
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKS----FDVECEMMKSIHHRNIIKVI 62
IG G +G K R DG + K L YG + ++ E +++ + H NI++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 63 SSCSNEEFKAL--VLEYMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASTLEYLHFGY 117
+ L V+EY G L + LD L +M + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 118 SA--QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
V+H DLKP+NV LD L DFG+A++L ++ + + T YM+PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKEFVGTPYYMSPEQMN 189
Query: 176 EGRVSANGDVYSFGIMLIE 194
+ D++S G +L E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 8 IGRGGFGSVFK-ARLGDGMEVAVK-----VFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
IGRG +GSV K G +AVK V + ++ DV +M+S I++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV---VMRSSDCPYIVQF 86
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILD--IYQRLNIMIDVASTLEYLHFGYSA 119
+ E + +E M S +K+ +LD I + + I +A+ H +
Sbjct: 87 YGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY-----G 174
++IH D+KPSN+LLD + L DFGI+ L S +T+ YMAPE
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD---SIAKTRDAGCRPYMAPERIDPSAS 202
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKP 201
++G DV+S GI L E T + P
Sbjct: 203 RQG-YDVRSDVWSLGITLYELATGRFP 228
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 127
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 27/203 (13%)
Query: 8 IGRGGFGSVFKARLGDG-MEVAVKVF-------------NLQYGRVFKSFDVECEMMKSI 53
+G G +G V + +G E A+KV N + + E ++KS+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 54 HHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMIDVASTLEY 112
H NIIK+ ++++ LV E+ G L E+ ++ + D NIM + S + Y
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF--DECDAANIMKQILSGICY 161
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDISTIQTQTLATIGYM 169
LH ++H D+KP N+LL++ + + DFG++ +++ L T Y+
Sbjct: 162 LH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLGTAYYI 215
Query: 170 APEYGKEGRVSANGDVYSFGIML 192
APE K+ + + DV+S G+++
Sbjct: 216 APEVLKK-KYNEKCDVWSCGVIM 237
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 128
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 125
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 124
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 128
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 127
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 127
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 127
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ L LEY G L + + + QR + + + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 127
Query: 124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANG 183
D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 184 -DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
S +I+ DLKP N+L+D ++DFG AK + +T TL T Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEIILS 213
Query: 177 GRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 214 KGYNKAVDWWALGVLIYE 231
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 125
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 126
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 126
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 126
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 126
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 125
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V A + G VAVK +L+ + + E +M+ H N++++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+E++ G+L + + ++ Q + + V L LH + VIH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI--VDPNL 232
S GIM+IE + P FN E LK + D LP K + V P+L
Sbjct: 201 SLGIMVIEMVDGEPP---YFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 246
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V A + G VAVK +L+ + + E +M+ H N++++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+E++ G+L + + ++ Q + + V L LH + VIH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI--VDPNL 232
S GIM+IE + P FN E LK + D LP K + V P+L
Sbjct: 210 SLGIMVIEMVDGEPP---YFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 255
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVK-----VFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+GRG +G V K R + G +AVK V + + R+ D+ M+++ +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 115
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL------NIMIDVASTLEYLHF 115
+ E + +E M SL+K+ ++D Q + I + + LE+LH
Sbjct: 116 YGALFREGDVWICMELM-DTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMA----- 170
S VIH D+KPSNVL++ + DFGI+ L TI YMA
Sbjct: 172 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA---GCKPYMAPERIN 226
Query: 171 PEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLP 221
PE ++G S D++S GI +IE + P D LK V + P
Sbjct: 227 PELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 5 NNLIGRGGFGSVFKA-RLGDGMEVAVKVF--NLQYGRVFKSFDVECEMMKSI-------- 53
L+G+GGFG+VF RL D ++VA+KV N G S V C + ++
Sbjct: 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG 95
Query: 54 HHRNIIKVISSCSNEEFKALVLEY-MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
H +I+++ +E LVLE +P L Y+ + + R V + +++
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQH 154
Query: 113 LHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
H S V+H D+K N+L+D A L DFG LL E + T Y P
Sbjct: 155 CH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----GTRVYSPP 207
Query: 172 EYGKEGRVSA-NGDVYSFGIMLIETFTRKKPTD---EIFNGEM 210
E+ + A V+S GI+L + P + EI E+
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V A + G VAVK +L+ + + E +M+ H N++++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+E++ G+L + + ++ Q + + V L LH + VIH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI--VDPNL 232
S GIM+IE + P FN E LK + D LP K + V P+L
Sbjct: 205 SLGIMVIEMVDGEPP---YFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 250
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V A + G VAVK +L+ + + E +M+ H N++++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+E++ G+L + + ++ Q + + V L LH + VIH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI--VDPNL 232
S GIM+IE + P FN E LK + D LP K + V P+L
Sbjct: 212 SLGIMVIEMVDGEPP---YFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 257
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F IG G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 4 ENNLIGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKV 61
+ +++G G V L E AVK+ Q G + E EM+ HRN++++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
I E+ LV E M GS+ ++H + ++ + ++ DVAS L++LH + +
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGI 132
Query: 122 IHCDLKPSNVLLD-DNMVA--HLSDFGIAK-LLTREDISTIQTQTLAT----IGYMAPE- 172
H DLKP N+L + N V+ + DF + + D S I T L T YMAPE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 173 ---YGKEGRV-SANGDVYSFGIML 192
+ +E + D++S G++L
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 46 ECEMMKSIHHRNIIKVISSC--SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM 103
E ++K + H N++K++ NE+ +V E + G + + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 104 IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL 163
D+ +EYLH+ ++IH D+KPSN+L+ ++ ++DFG++ D + + T+
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTV 198
Query: 164 ATIGYMAPEYGKEGRVSANG---DVYSFGIML 192
T +MAPE E R +G DV++ G+ L
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 7 LIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNI------ 58
L+G G +G V+K R + G A+KV ++ G + E M+K HHRNI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 59 -IKVISSCSNEEFKALVLEYMPHGSLEKYL-HSSNYILDIYQRLNIMIDVASTLEYLHFG 116
IK +++ LV+E+ GS+ + ++ L I ++ L +LH
Sbjct: 90 FIKKNPPGMDDQL-WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH-- 146
Query: 117 YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAPEY- 173
+VIH D+K NVLL +N L DFG++ L R T+ + + T +MAPE
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR----TVGRRNTFIGTPYWMAPEVI 201
Query: 174 ----GKEGRVSANGDVYSFGIMLIETFTRKKP 201
+ D++S GI IE P
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + + E A K+ N + R + + E + + + H NI+++ S
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S E F LV + + G L + + + Y Y + + LE ++ + ++H
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREY----YSEADASHCIHQILESVNHIHQHDIVHR 154
Query: 125 DLKPSNVLLDDN---MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
DLKP N+LL L+DFG+A + E + T GY++PE ++
Sbjct: 155 DLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 212
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 213 PVDIWACGVIL 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 16/230 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V A + G VAVK +L+ + + E +M+ H N++++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+E++ G+L + + ++ Q + + V L LH + VIH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI--VDPNL 232
S GIM+IE + P FN E LK + D LP K + V P+L
Sbjct: 255 SLGIMVIEMVDGEPP---YFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 300
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 151
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 203
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 204 LSKGYNKAVDWWALGVLIYE 223
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 27/237 (11%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI------HHRNII 59
+G G +G V A R+ + VAVK+ +++ ++ D + K I +H N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINAMLNHENVV 68
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRLNIMIDVASTLEYLHFGYS 118
K + L LEY G L + + + QR + + + YLH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---G 123
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
+ H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 179 VSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
A DV+S GI+L + P D+ + W +N W I + +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M L +L ++ Y L Q L+ + + L+Y+H S
Sbjct: 107 -NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 162
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 163 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 255
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 21/234 (8%)
Query: 8 IGRGGFGSVFKA--RLGDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G G V A R+ + VAVK+ +++ ++ E + K ++H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDI-YQRL--NIMIDVASTLEYLHFGYSAQV 121
+ L LEY G L + + + QR +M V YLH +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH---GIGI 125
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
H D+KP N+LLD+ +SDFG+A + + + + T+ Y+APE K A
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 182 NG-DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW------VNDWLPISTKEIV 228
DV+S GI+L + P D+ + W +N W I + +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
IG G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + ++ G E A K+ N + R + + E + + + H NI+++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S E L+ + + G L + + + Y Y + + LE + + V+H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 125 DLKPSNVLLDDNM---VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
DLKP N+LL + L+DFG+A + E + T GY++PE ++
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 203
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 204 PVDLWACGVIL 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNAMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVE-----CEMMKSIHH 55
F +G G FG V + + G A+K+ + Q +V K ++E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAVNF 100
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPE 172
S +I+ DLKP N+++D ++DFG+AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 173 YGKEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 151
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 203
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 204 LSKGYNKAVDWWALGVLIYE 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
IG G G V A + G VAVK +L+ + + E +M+ H N++++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDL 126
+ +V+E++ G+L + ++ ++ Q + + V L LH + VIH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 127 KPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVY 186
K ++LL + LSDFG +++E + + T +MAPE D++
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 187 SFGIMLIETFTRKKPTDEIFNGEMTLK--HWVNDWLPISTKEI--VDPNL 232
S GIM+IE + P FN E LK + D LP K + V P+L
Sbjct: 332 SLGIMVIEMVDGEPP---YFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSL 377
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 141
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 196
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 197 YNQTVDIWSVGCIMAELLT 215
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 143
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 198
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 199 YNQTVDIWSVGCIMAELLT 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 141
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 196
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 197 YNQTVDIWSVGCIMAELLT 215
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 23/202 (11%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDVE-----CEMMKSIHH 55
F +G G FG V + + G A+K+ + Q +V K ++E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAVNF 100
Query: 56 RNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
++K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPE 172
S +I+ DLKP N+++D ++DFG+AK ++ +T G Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLAPE 208
Query: 173 YGKEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 155
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 210
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 211 YNQTVDIWSVGCIMAELLT 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 151
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 206
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 207 YNQTVDIWSVGCIMAELLT 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+P G + +L + + R + T EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 179
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 231
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V+KA+ G A+K L+ + + E ++K + H NI+K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
++ LV E++ L+K L L+ + ++ + + + Y H +V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPE-YGKEGRVSANG 183
LKP N+L++ ++DFG+A+ I + T + T+ Y AP+ + S
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 184 DVYSFGIMLIE 194
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 149
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 204
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 205 YNQTVDIWSVGCIMAELLT 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 142
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 197
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 198 YNQTVDIWSVGCIMAELLT 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 155
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 210
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 211 YNQTVDIWSVGCIMAELLT 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV + + G+++AVK + + + K E ++K + H N+I ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 173
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 228
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 229 YNMTVDIWSVGCIMAELLT 247
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + S D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+ + E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ + H NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 237
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 219
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 146
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 201
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 202 YNQTVDIWSVGCIMAELLT 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 218
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 219 YNQTVDIWSVGCIMAELLT 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVK-----VFNLQYGRVFKSFDVECEMMKSIHHRNIIKV 61
+GRG +G V K R + G +AVK V + + R+ D+ M+++ +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS---MRTVDCPFTVTF 71
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL------NIMIDVASTLEYLHF 115
+ E + +E M SL+K+ ++D Q + I + + LE+LH
Sbjct: 72 YGALFREGDVWICMELM-DTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMA----- 170
S VIH D+KPSNVL++ + DFGI+ L + I YMA
Sbjct: 128 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERIN 182
Query: 171 PEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLP 221
PE ++G S D++S GI +IE + P D LK V + P
Sbjct: 183 PELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 232
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V+KA+ G A+K L+ + + E ++K + H NI+K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
++ LV E++ L+K L L+ + ++ + + + Y H +V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPE-YGKEGRVSANG 183
LKP N+L++ ++DFG+A+ I + T + T+ Y AP+ + S
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 184 DVYSFGIMLIE 194
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 156
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 211
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 212 YNQTVDIWSVGCIMAELLT 230
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 111/283 (39%), Gaps = 52/283 (18%)
Query: 8 IGRGGFGSVFKARLGD---GMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNIIKVIS 63
+GRG FG V R+ D G + AVK L+ VF++ ++ C + S I+ +
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSP---RIVPLYG 152
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ + + +E + GSL + + L + L + LEYLH S +++H
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQG-CLPEDRALYYLGQALEGLEYLH---SRRILH 208
Query: 124 CDLKPSNVLL-DDNMVAHLSDFGIA----------KLLTREDISTIQTQTLATIGYMAPE 172
D+K NVLL D A L DFG A LLT + I +T +MAPE
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET-------HMAPE 261
Query: 173 YGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL 232
A DV+S M++ P + F G + LK P +EI
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASE---PPPVREI----- 313
Query: 233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
C E + P R++A E+ K+
Sbjct: 314 ----------PPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKV 346
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV----ECEMMKSIHHRNIIKVI 62
IG+G FG VFKAR G +VA+K ++ + + F + E ++++ + H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 63 SSCSNE-----EFKA---LVLEYMPH---GSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
C + KA LV ++ H G L L + L +R+ M+ L
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQML-----LN 136
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTREDISTIQTQTLATIGYM 169
L++ + +++H D+K +NVL+ + V L+DFG+A+ L + + T+ Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 170 APE-YGKEGRVSANGDVYSFGIMLIETFTR 198
PE E D++ G ++ E +TR
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V+KA+ G A+K L+ + + E ++K + H NI+K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCD 125
++ LV E++ L+K L L+ + ++ + + + Y H +V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 126 LKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPE-YGKEGRVSANG 183
LKP N+L++ ++DFG+A+ I + T + T+ Y AP+ + S
Sbjct: 126 LKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 184 DVYSFGIMLIE 194
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 14/190 (7%)
Query: 7 LIGRGGFGSVF--KARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
++G G F VF K RL G A+K S + E ++K I H NI+ +
Sbjct: 16 VLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ LV++ + G L + + L ++ V S ++YLH ++H
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQVLSAVKYLH---ENGIVHR 130
Query: 125 DLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
DLKP N+L ++N ++DFG++K+ + + I + T GY+APE + S
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 182 NGDVYSFGIM 191
D +S G++
Sbjct: 187 AVDCWSIGVI 196
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 167
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 222
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 223 YNQTVDIWSVGCIMAELLT 241
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ + H NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 108/276 (39%), Gaps = 38/276 (13%)
Query: 8 IGRGGFGSVFKARLGD---GMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNIIKVIS 63
+GRG FG V R+ D G + AVK L+ VF++ ++ C + S I+ +
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSP---RIVPLYG 133
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ + + +E + GSL + + L + L + LEYLH S +++H
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQG-CLPEDRALYYLGQALEGLEYLH---SRRILH 189
Query: 124 CDLKPSNVLL-DDNMVAHLSDFGIAKLLTREDIST---IQTQTLATIGYMAPEYGKEGRV 179
D+K NVLL D A L DFG A L + + T +MAPE
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH 239
A DV+S M++ P + F G + LK P +EI
Sbjct: 250 DAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASE---PPPVREI------------ 294
Query: 240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL 275
C E + P R++A E+ K+
Sbjct: 295 ---PPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKV 327
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI---- 90
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDV-ECEMMKSIHHRNII 59
F +GRGGFG VF+A+ D A+K L + + + E + + + H I+
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 60 KV------------ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQR--LNIMID 105
+ + S + + + ++ +L+ +++ I + + L+I +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTI------ 158
+A +E+LH S ++H DLKPSN+ + V + DFG+ + + E+ T+
Sbjct: 127 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 159 ---QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T YM+PE S D++S G++L E
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 88
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E + ++++
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +VLEY P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 140
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAV-KVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+ K+ ++ + E +++ H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 8 IGRGGFGSVFKARLGD---GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
+GRG FG V R+ D G + AVK L+ RV + V C + S I+ + +
Sbjct: 66 VGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSP---RIVPLYGA 118
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + +E + GSL + + L + L + LEYLH + +++H
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHG 174
Query: 125 DLKPSNVLL-DDNMVAHLSDFGIA----------KLLTREDISTIQTQTLATIGYMAPEY 173
D+K NVLL D A L DFG A LLT + I +T +MAPE
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAPEV 227
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
A D++S M++ P + F G + LK
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 140
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 25/220 (11%)
Query: 8 IGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS 66
+G GGF V L DG A+K + + E +M + +H NI+++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 67 NEEFKA----LVLEYMPHGSL----EKYLHSSNYILDIYQRLNIMIDVASTLEYLHF-GY 117
E L+L + G+L E+ N++ + Q L +++ + LE +H GY
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED-QILWLLLGICRGLEAIHAKGY 155
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-------ATIGYMA 170
+ H DLKP+N+LL D L D G + Q TL TI Y A
Sbjct: 156 A----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 171 PEY---GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFN 207
PE + DV+S G +L + P D +F
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 147
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 240
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 92
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 93 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 148
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 241
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 83
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 84 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 139
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 232
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 94
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 95 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 150
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 243
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 235
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 8 IGRGGFGSVFKARLGD---GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
+GRG FG V R+ D G + AVK L+ RV + V C + S I+ + +
Sbjct: 82 VGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSP---RIVPLYGA 134
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + +E + GSL + + L + L + LEYLH + +++H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHG 190
Query: 125 DLKPSNVLL-DDNMVAHLSDFGIA----------KLLTREDISTIQTQTLATIGYMAPEY 173
D+K NVLL D A L DFG A LLT + I +T +MAPE
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAPEV 243
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
A D++S M++ P + F G + LK
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 5 NNLIGRGGFGSVFKA---RLGD-----GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHR 56
N +G+G F +FK +GD EV +KV + + +SF MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
+++ C + LV E++ GSL+ YL + ++I +L + +A+ +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 117 YSAQVIHCDLKPSNVLL---DDNMVAH-----LSDFGIAKLLTREDISTIQTQTLATIGY 168
+IH ++ N+LL +D + LSD GI+ + +DI +Q + I +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQER----IPW 183
Query: 169 MAPEYGKEGR-VSANGDVYSFGIMLIE 194
+ PE + + ++ D +SFG L E
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV----ECEMMKSIHHRNIIKVI 62
IG+G FG VFKAR G +VA+K ++ + + F + E ++++ + H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 63 SSCSNEEFKA--------LVLEYMPH---GSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
C + LV ++ H G L L + L +R+ M+ L
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQML-----LN 136
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTREDISTIQTQTLATIGYM 169
L++ + +++H D+K +NVL+ + V L+DFG+A+ L + + T+ Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 170 APE-YGKEGRVSANGDVYSFGIMLIETFTR 198
PE E D++ G ++ E +TR
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + D+G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 1 GFSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI 58
G+ IG G + SV K + ME AVK+ + + ++ +++ H NI
Sbjct: 23 GYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQHPNI 78
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
I + + ++ +V E M G L + + + + ++ + T+EYLH +
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH---A 134
Query: 119 AQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
V+H DLKPSN+L D + DFG AK L E+ + T ++APE
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVL 192
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKP 201
+ A D++S G++L T P
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 107 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 162
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + T+ +AT Y APE
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 255
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV----ECEMMKSIHHRNIIKVI 62
IG+G FG VFKAR G +VA+K ++ + + F + E ++++ + H N++ +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 82
Query: 63 SSCSNEEFKA--------LVLEYMPH---GSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
C + LV ++ H G L L + L +R+ M+ L
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQML-----LN 135
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTREDISTIQTQTLATIGYM 169
L++ + +++H D+K +NVL+ + V L+DFG+A+ L + + T+ Y
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 170 APE-YGKEGRVSANGDVYSFGIMLIETFTR 198
PE E D++ G ++ E +TR
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+GGF F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 139
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKEGRVSA 181
H DLK N+ L++++ + DFG+A T+ + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDW 219
DV+S G ++ K P + E L+ N++
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFDV----ECEMMKSIHHRNIIKVI 62
IG+G FG VFKAR G +VA+K ++ + + F + E ++++ + H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 63 SSCSNEEFKA--------LVLEYMPH---GSLEKYLHSSNYILDIYQRLNIMIDVASTLE 111
C + LV ++ H G L L + L +R+ M+ L
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQML-----LN 136
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTREDISTIQTQTLATIGYM 169
L++ + +++H D+K +NVL+ + V L+DFG+A+ L + + T+ Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 170 APE-YGKEGRVSANGDVYSFGIMLIETFTR 198
PE E D++ G ++ E +TR
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+GGF F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 139
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKEGRVSA 181
H DLK N+ L++++ + DFG+A T+ + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDW 219
DV+S G ++ K P + E L+ N++
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 8 IGRGGFGSVFKARLGD---GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
+GRG FG V R+ D G + AVK L+ RV + V C + S I+ + +
Sbjct: 80 LGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEEL--VACAGLSSP---RIVPLYGA 132
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ + +E + GSL + + L + L + LEYLH + +++H
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHG 188
Query: 125 DLKPSNVLL-DDNMVAHLSDFGIA----------KLLTREDISTIQTQTLATIGYMAPEY 173
D+K NVLL D A L DFG A LLT + I +T +MAPE
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAPEV 241
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK 213
A D++S M++ P + F G + LK
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 154
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 209
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 210 YNQTVDIWSVGCIMAELLT 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHRN 57
+ ++G+G FG V + G E AVKV + ++ +S E +++K + H N
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
I+K+ ++ + LV E G L + S ++ I+ V S + Y+H
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMH--- 149
Query: 118 SAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
+++H DLKP N+LL+ + + DFG++ T + S + T Y+APE
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEV- 205
Query: 175 KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG 208
G DV+S G++L + P FNG
Sbjct: 206 LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 235
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 195
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+GGF F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 143
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKEGRVSA 181
H DLK N+ L++++ + DFG+A T+ + + +TL T Y+APE + S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDW 219
DV+S G ++ K P + E L+ N++
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 8 IGRGGFGSV---FKARLGDGMEVAVKVFNLQYGRVFKSFDV--ECEMMKSIHHRNIIKVI 62
+G G +GSV + ARL +VAVK + + + + E ++K + H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 63 ----SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ S E+F + L G+ + S + D + + ++ + L+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG- 177
A +IH DLKPSNV ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPEIMLNWM 204
Query: 178 RVSANGDVYSFGIMLIETFTRK 199
+ D++S G ++ E K
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNII 59
+++ IG G +G V A VA+K + ++ + E +++ H N+I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN------IMIDVASTLEYL 113
+ +A+ Y+ ++ + + Y L Q+L+ + + L+Y+
Sbjct: 105 GIRDILRASTLEAMRDVYI----VQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPE 172
H SA V+H DLKPSN+L++ + DFG+A++ E D + T+ +AT Y APE
Sbjct: 161 H---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 173 YGKEGR-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 255
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 163
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 218
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 219 YNQTVDIWSVGCIMAELLT 237
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 7 LIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDV--ECEMMKSIHHRNIIKVIS 63
++G+G FG V K + E AVKV N + + + E E++K + H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ +V E G L + + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 124 CDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
DLKP N+LL+ + + DFG++ + +T + T Y+APE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 181 ANGDVYSFGIML 192
DV+S G++L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G G E A K + + G + + E +++ I H NII
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + YLH S +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEATQFLKQILDGVHYLH---SKR 135
Query: 121 VIHCDLKPSNVLLDDNMVAH----LSDFGIA-KLLTREDISTIQTQTLATIGYMAPEYGK 175
+ H DLKP N++L D V + L DFGIA K+ + I T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI----FGTPEFVAPEIVN 191
Query: 176 EGRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 YEPLGLEADMWSIGVI 207
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 219
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 150
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 205
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 206 YNQTVDIWSVGCIMAELLT 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY------GRVFKSFDVECEMMKSIHHRNIIK 60
IG G G V A G+ VAVK + + R ++ E ++K ++H+NII
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNIIS 87
Query: 61 VISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH 114
+++ + EEF+ LV+E M +L + +H LD + ++ + +++LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLH 143
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
SA +IH DLKPSN+++ + + DFG+A+ + + T + T Y APE
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC---TNFMMTPYVVTRYYRAPEVI 197
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+AN D++S G ++ E
Sbjct: 198 LGMGYAANVDIWSVGCIMGE 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVK------VFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G G E A K + + + G + + E +++ I H NII
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + YLH S +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEATQFLKQILDGVHYLH---SKR 149
Query: 121 VIHCDLKPSNVLLDDNMVAH----LSDFGIA-KLLTREDISTIQTQTLATIGYMAPEYGK 175
+ H DLKP N++L D V + L DFGIA K+ + I T ++APE
Sbjct: 150 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI----FGTPEFVAPEIVN 205
Query: 176 EGRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 206 YEPLGLEADMWSIGVI 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 8 IGRGGFGSVFKARL-GDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G G E A K + + G + + E +++ I H NII
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + YLH S +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-DEATQFLKQILDGVHYLH---SKR 128
Query: 121 VIHCDLKPSNVLLDDNMVAH----LSDFGIA-KLLTREDISTIQTQTLATIGYMAPEYGK 175
+ H DLKP N++L D V + L DFGIA K+ + I T ++APE
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI----FGTPEFVAPEIVN 184
Query: 176 EGRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 185 YEPLGLEADMWSIGVI 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 7 LIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDV--ECEMMKSIHHRNIIKVIS 63
++G+G FG V K + E AVKV N + + + E E++K + H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ +V E G L + + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 124 CDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
DLKP N+LL+ + + DFG++ + +T + T Y+APE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 181 ANGDVYSFGIML 192
DV+S G++L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLA-TIGYMAPEYGKE 176
S +I+ DLKP N+L+D ++DFG AK + +T LA T Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAPEIILS 212
Query: 177 GRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 213 KGYNKAVDWWALGVLIYE 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 7 LIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDV--ECEMMKSIHHRNIIKVIS 63
++G+G FG V K + E AVKV N + + + E E++K + H NI+K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIH 123
+ +V E G L + + + I+ V S + Y+H ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVH 144
Query: 124 CDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVS 180
DLKP N+LL+ + + DFG++ + +T + T Y+APE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 181 ANGDVYSFGIML 192
DV+S G++L
Sbjct: 201 EKCDVWSAGVIL 212
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 167
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E + AT Y APE
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV-----ATRWYRAPEIMLNWMH 222
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 223 YNQTVDIWSVGCIMAELLT 241
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 145
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D+ ++DFG AK ++ +T G Y+APE
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 197
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 198 LSKGYNKAVDWWALGVLIYE 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 44 DVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 97
+ E E++K ++H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 98 QRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 154
Q L ++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 261 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 308
Query: 155 ISTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLIETFTRKKPTDE 204
+++ T Y+APE G G A D +S G++L + P E
Sbjct: 309 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSE 360
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 6 NLIGRGGFGSVFKARLGDG--------MEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRN 57
++G G +G VF R G M+V K +Q + + E ++++ I
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 58 IIKVISSCSNEEFKA-LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMI-DVASTLEYLHF 115
+ + E K L+L+Y+ G L + H S + I + ++ LE+LH
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIVLALEHLH- 176
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
+I+ D+K N+LLD N L+DFG++K D + TI YMAP+ +
Sbjct: 177 --KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIVR 233
Query: 176 EGRVSANG--DVYSFGIMLIETFTRKKP 201
G + D +S G+++ E T P
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 2 FSENNLIGRGGFGSVF--KARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHR 56
+ ++G+G FG V K ++ G E AVKV + ++ +S E +++K + H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
NI+K+ ++ + LV E G L + S ++ I+ V S + Y+H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMH-- 143
Query: 117 YSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY 173
+++H DLKP N+LL+ + + DFG++ T + S + T Y+APE
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEV 199
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG 208
G DV+S G++L + P FNG
Sbjct: 200 -LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 229
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
+ K+ S + +V+EY P G + +L + + R + T EYLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 5 NNLIGRGGFGSVFKA---RLGD-----GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHR 56
N +G+G F +FK +GD EV +KV + + +SF MM + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY-LHF 115
+++ C + LV E++ GSL+ YL + ++I +L +VA L + +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL----EVAKQLAWAMHF 128
Query: 116 GYSAQVIHCDLKPSNVLL---DDNMVAH-----LSDFGIAKLLTREDISTIQTQTLATIG 167
+IH ++ N+LL +D + LSD GI+ + +DI +Q + I
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQER----IP 182
Query: 168 YMAPEYGKEGR-VSANGDVYSFGIMLIE 194
++ PE + + ++ D +SFG L E
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 44 DVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 97
+ E E++K ++H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 98 QRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 154
Q L ++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 247 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 294
Query: 155 ISTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLIETFTRKKPTDE 204
+++ T Y+APE G G A D +S G++L + P E
Sbjct: 295 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSGYPPFSE 346
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 153
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 205
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 206 LSKGYNKAVDWWALGVLIYE 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 48/237 (20%)
Query: 8 IGRGGFGSVFKA---RLGDGMEVAVKVFN-----LQYGRVFKSFDVECEMMKSIHHRNII 59
+G+G +G V+K+ R G+ + V K+F+ R F+ + E+ H NI+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-KIFDAFQNSTDAQRTFREIMILTELSG---HENIV 72
Query: 60 KVIS--SCSNEEFKALVLEYMPHGSLEKYLHS--SNYILDIYQRLNIMIDVASTLEYLHF 115
+++ N+ LV +YM E LH+ IL+ + ++ + ++YLH
Sbjct: 73 NLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH- 126
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-------------------EDIS 156
S ++H D+KPSN+LL+ ++DFG+++ +D
Sbjct: 127 --SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 157 TIQTQTLATIGYMAPEYGKEGRVSANG-DVYSFGIMLIETFTRKKPTDEIFNGEMTL 212
I T +AT Y APE G D++S G +L E K IF G T+
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK----PIFPGSSTM 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGR--VFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G V+KA VA+K L++ V + E ++K + HRNII++ S
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
+ L+ EY L+KY+ + D+ R+ I + + ++F +S + +H
Sbjct: 102 IHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSFLYQLINGVNFCHSRRCLHR 156
Query: 125 DLKPSNVLL-----DDNMVAHLSDFGIAKLLTREDISTIQ-TQTLATIGYMAPEYGKEGR 178
DLKP N+LL + V + DFG+A+ I Q T + T+ Y PE R
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAF---GIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 179 -VSANGDVYSFGIMLIETFTR 198
S + D++S + E +
Sbjct: 214 HYSTSVDIWSIACIWAEMLMK 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 2 FSENNLIGRGGFGSVF--KARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHR 56
+ ++G+G FG V K ++ G E AVKV + ++ +S E +++K + H
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
NI+K+ ++ + LV E G L + S ++ I+ V S + Y+H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMH-- 166
Query: 117 YSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY 173
+++H DLKP N+LL+ + + DFG++ T + S + T Y+APE
Sbjct: 167 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEV 222
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG 208
G DV+S G++L + P FNG
Sbjct: 223 -LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 252
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 2 FSENNLIGRGGFGSVF--KARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHR 56
+ ++G+G FG V K ++ G E AVKV + ++ +S E +++K + H
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
NI+K+ ++ + LV E G L + S ++ I+ V S + Y+H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMH-- 167
Query: 117 YSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY 173
+++H DLKP N+LL+ + + DFG++ T + S + T Y+APE
Sbjct: 168 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEV 223
Query: 174 GKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG 208
G DV+S G++L + P FNG
Sbjct: 224 -LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 253
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 179
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
S +I+ DLKP N+L+D ++DFG AK + T TL T Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCGTPEYLAPEIILS 233
Query: 177 GRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 234 KGYNKAVDWWALGVLIYE 251
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + + +AT Y APE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 239
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVK-VFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC 65
IG G +G V A + + VA+K + ++ + E +++ H NII +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLN------IMIDVASTLEYLHFGYS 118
N+ +A +E M + + L ++ Y L Q L+ + + L+Y+H S
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---S 147
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE-DISTIQTQTLATIGYMAPEYGKEG 177
A V+H DLKPSN+LL+ + DFG+A++ + D + + +AT Y APE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 178 R-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + + D++S G +L E + + IF G KH+++
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLD 240
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 14/206 (6%)
Query: 1 GFSENNLIGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNII 59
G+ IG G + + ME AVKV + + ++ +++ H NII
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPNII 84
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + + LV E M G L + + + ++ + T+EYLH S
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYLH---SQ 140
Query: 120 QVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
V+H DLKPSN+L D + DFG AK L E+ + T ++APE K
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLK 198
Query: 176 EGRVSANGDVYSFGIMLIETFTRKKP 201
D++S GI+L P
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVK-VFN-LQYGRVF---------KSFDVECEMM 50
++ I G +G+V +G+ VA+K VFN + GR K E ++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 51 KSIHHRNIIKVISSCSNEEFKA-----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMID 105
HH NI+ + + E A LV E M L + +H ++ M
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI-QTQTLA 164
+ L LH A V+H DL P N+LL DN + DF +A RED + +T +
Sbjct: 143 ILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLA----REDTADANKTHYVT 195
Query: 165 TIGYMAPEYGKEGR-VSANGDVYSFGIMLIETFTRK 199
Y APE + + + D++S G ++ E F RK
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEVAVK-VFN-LQYGRVF---------KSFDVECEMM 50
++ I G +G+V +G+ VA+K VFN + GR K E ++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 51 KSIHHRNIIKVISSCSNEEFKA-----LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMID 105
HH NI+ + + E A LV E M L + +H ++ M
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 106 VASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI-QTQTLA 164
+ L LH A V+H DL P N+LL DN + DF +A RED + +T +
Sbjct: 143 ILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLA----REDTADANKTHYVT 195
Query: 165 TIGYMAPEYGKEGR-VSANGDVYSFGIMLIETFTRK 199
Y APE + + + D++S G ++ E F RK
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 42 SFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRL 100
S + E ++ I H NI+ + + L+++ + G L ++ + Y RL
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 101 NIMIDVASTLEYLHFGYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDIST 157
+ V ++YLH ++H DLKP N+L LD++ +SDFG++K+ ED +
Sbjct: 122 --IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 191
+ + T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 42 SFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRL 100
S + E ++ I H NI+ + + L+++ + G L ++ + Y RL
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 101 NIMIDVASTLEYLHFGYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDIST 157
+ V ++YLH ++H DLKP N+L LD++ +SDFG++K+ ED +
Sbjct: 122 --IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 191
+ + T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRN 57
+ +G+GGF ++ D EV A KV L + E + KS+ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++ +++F +VLE SL + LH + + M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
+ +VIH DLK N+ L+D+M + DFG+A T+ + + +TL T Y+APE +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 177 GRVSANGDVYSFGIMLIETFTRKKP 201
S D++S G +L K P
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 14/197 (7%)
Query: 1 GFSENNLIGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNII 59
G+ IG G + + ME AVKV + + S ++E +++ H NII
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVID--KSKRDPSEEIEI-LLRYGQHPNII 84
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + + LV E M G L + + + ++ + T+EYLH S
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYLH---SQ 140
Query: 120 QVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
V+H DLKPSN+L D + DFG AK L E+ + T ++APE K
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLK 198
Query: 176 EGRVSANGDVYSFGIML 192
D++S GI+L
Sbjct: 199 RQGYDEGCDIWSLGILL 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 42 SFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRL 100
S + E ++ I H NI+ + + L+++ + G L ++ + Y RL
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 101 NIMIDVASTLEYLHFGYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDIST 157
+ V ++YLH ++H DLKP N+L LD++ +SDFG++K+ ED +
Sbjct: 122 --IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 191
+ + T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 44 DVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 97
+ E E++K ++H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 98 QRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 154
Q L ++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 121 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 168
Query: 155 ISTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLIETFTRKKPTDE 204
+++ T Y+APE G G A D +S G++L + P E
Sbjct: 169 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGYPPFSE 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 44 DVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 97
+ E E++K ++H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 98 QRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 154
Q L ++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 169
Query: 155 ISTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLIETFTRKKPTDE 204
+++ T Y+APE G G A D +S G++L + P E
Sbjct: 170 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGYPPFSE 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 44 DVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 97
+ E E++K ++H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 98 QRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 154
Q L ++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 169
Query: 155 ISTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLIETFTRKKPTDE 204
+++ T Y+APE G G A D +S G++L + P E
Sbjct: 170 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGYPPFSE 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + FG+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH--- 179
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 231
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 44 DVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 97
+ E E++K ++H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 98 QRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 154
Q L ++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 169
Query: 155 ISTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLIETFTRKKPTDE 204
+++ T Y+APE G G A D +S G++L + P E
Sbjct: 170 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGYPPFSE 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPAFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKS-----IHHRNIIK 60
++G+G FG V A R G A+K+ L+ V + DVEC M++ + +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 61 VISSC-SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ SC + V+EY+ G L ++ + Q + +++ L +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP-QAVFYAAEISIGLFFLH---KR 139
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+I+ DLK NV+LD ++DFG+ K + ++T + T Y+APE
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT--REFCGTPDYIAPEIIAYQPY 197
Query: 180 SANGDVYSFGIMLIETFTRKKPTDEIFNGE 209
+ D +++G++L E + P F+GE
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPP----FDGE 223
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 44 DVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL------EKYLHSSNYILDIY 97
+ E E++K ++H IIK+ + E++ +VLE M G L K L + L Y
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 98 QRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED 154
Q L ++YLH +IH DLKP NVLL +++ + ++DFG +K+L
Sbjct: 128 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 175
Query: 155 ISTIQTQTLATIGYMAPE----YGKEGRVSANGDVYSFGIMLIETFTRKKPTDE 204
+++ T Y+APE G G A D +S G++L + P E
Sbjct: 176 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV-DCWSLGVILFICLSGYPPFSE 227
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+GGF F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 137
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKEGRVSA 181
H DLK N+ L++++ + DFG+A T+ + + + L T Y+APE + S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDW 219
DV+S G ++ K P + E L+ N++
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + D G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 42 SFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRL 100
S + E ++ I H NI+ + + L+++ + G L ++ + Y RL
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 101 NIMIDVASTLEYLHFGYSAQVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTREDIST 157
+ V ++YLH ++H DLKP N+L LD++ +SDFG++K+ ED +
Sbjct: 122 --IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGS 173
Query: 158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 191
+ + T GY+APE + S D +S G++
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 164
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E + AT Y APE
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV-----ATRWYRAPEIMLNWMH 219
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 220 YNQTVDIWSVGCIMAELLT 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+GGF F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 161
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKEGRVSA 181
H DLK N+ L++++ + DFG+A T+ + + + L T Y+APE + S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDW 219
DV+S G ++ K P + E L+ N++
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 256
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 45/298 (15%)
Query: 2 FSENNL-----IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVFK-SFDVECEM 49
F N L +G G FG V +A + M VAVK+ + + E ++
Sbjct: 43 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 102
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQ 98
+ + +H NI+ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 103 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 99 RLNIMIDVAS----TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 154
+ D+ S + + F S IH DL N+LL + + DFG+A+ + +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH 214
++ + +MAPE + DV+S+GI L E F+ + G
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL---GSSPYPG------ 273
Query: 215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 272
+P+ +K + +E ++ E + ++++ C P +R K+IV
Sbjct: 274 -----MPVDSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G+G F V + ++ G E A + N + R + + E + + + H NI+++ S
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 65 CSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC 124
S E L+ + + G L + + + Y Y + + LE + + V+H
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQMGVVHR 134
Query: 125 DLKPSNVLLDDNM---VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
+LKP N+LL + L+DFG+A + E + T GY++PE ++
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGK 192
Query: 182 NGDVYSFGIML 192
D+++ G++L
Sbjct: 193 PVDLWACGVIL 203
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 8 IGRGGFGSV---FKARLGDGMEVAVKVFNLQYGRVFKSFDV--ECEMMKSIHHRNIIKVI 62
+G G +GSV + ARL +VAVK + + + + E ++K + H N+I ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 63 ----SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ S E+F + L G+ + + D + + ++ + L+Y+H S
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---S 141
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG- 177
A +IH DLKPSNV ++++ + DFG+A+ E T +AT Y APE
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWYRAPEIMLNWM 196
Query: 178 RVSANGDVYSFGIMLIETFTRK 199
+ D++S G ++ E K
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 121
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 122 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 175
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 75/263 (28%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSS------------------NYI----L 94
++ ++ +C+ +V+ E+ G+L YL S +Y+ +
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 95 DIYQRLNI-----------------MIDVAS------------TLEYL-----------H 114
D+ +RL+ + DV TLE+L
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
F S + IH DL N+LL + V + DFG+A+ + ++ + + +MAPE
Sbjct: 208 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 267
Query: 175 KEGRVSANGDVYSFGIMLIETFT 197
+ + DV+SFG++L E F+
Sbjct: 268 FDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + D G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 12/218 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRNIIKVI 62
+G+GGF F+ D EV A K+ L + +E + +S+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
+ +F +VLE SL + LH L + + + +YLH +VI
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVI 163
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKEGRVSA 181
H DLK N+ L++++ + DFG+A T+ + + + L T Y+APE + S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 182 NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDW 219
DV+S G ++ K P + E L+ N++
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 75/263 (28%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSS------------------NYI----L 94
++ ++ +C+ +V+ E+ G+L YL S +Y+ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 152
Query: 95 DIYQRLNI-----------------MIDVAS------------TLEYL-----------H 114
D+ +RL+ + DV TLE+L
Sbjct: 153 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 212
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
F S + IH DL N+LL + V + DFG+A+ + ++ + + +MAPE
Sbjct: 213 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 272
Query: 175 KEGRVSANGDVYSFGIMLIETFT 197
+ + DV+SFG++L E F+
Sbjct: 273 FDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 45/298 (15%)
Query: 2 FSENNL-----IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVFK-SFDVECEM 49
F N L +G G FG V +A + M VAVK+ + + E ++
Sbjct: 43 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 102
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQ 98
+ + +H NI+ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 103 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 99 RLNIMIDVAS----TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 154
+ D+ S + + F S IH DL N+LL + + DFG+A+ + +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH 214
++ + +MAPE + DV+S+GI L E F+ + G
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL---GSSPYPG------ 273
Query: 215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 272
+P+ +K + +E ++ E + ++++ C P +R K+IV
Sbjct: 274 -----MPVDSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 75/263 (28%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSS------------------NYI----L 94
++ ++ +C+ +V+ E+ G+L YL S +Y+ +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 154
Query: 95 DIYQRLNI-----------------MIDVAS------------TLEYL-----------H 114
D+ +RL+ + DV TLE+L
Sbjct: 155 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 214
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
F S + IH DL N+LL + V + DFG+A+ + ++ + + +MAPE
Sbjct: 215 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 274
Query: 175 KEGRVSANGDVYSFGIMLIETFT 197
+ + DV+SFG++L E F+
Sbjct: 275 FDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 123 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSAN 182
H D+KP N+L+ + A+L DFGIA T E ++ + T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL-GNTVGTLYYXAPERFSESHATYR 215
Query: 183 GDVYSFGIMLIETFTRKKP 201
D+Y+ +L E T P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 45/298 (15%)
Query: 2 FSENNL-----IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVFK-SFDVECEM 49
F N L +G G FG V +A + M VAVK+ + + E ++
Sbjct: 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQ 98
+ + +H NI+ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 99 RLNIMIDVAS----TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 154
+ D+ S + + F S IH DL N+LL + + DFG+A+ + +
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH 214
++ + +MAPE + DV+S+GI L E F+ + G
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL---GSSPYPG------ 250
Query: 215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 272
+P+ +K + +E ++ E + ++++ C P +R K+IV
Sbjct: 251 -----MPVDSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 45/298 (15%)
Query: 2 FSENNL-----IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVFK-SFDVECEM 49
F N L +G G FG V +A + M VAVK+ + + E ++
Sbjct: 38 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 97
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQ 98
+ + +H NI+ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 98 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 99 RLNIMIDVAS----TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 154
+ D+ S + + F S IH DL N+LL + + DFG+A+ + +
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH 214
++ + +MAPE + DV+S+GI L E F+ + G
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL---GSSPYPG------ 268
Query: 215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 272
+P+ +K + +E ++ E + ++++ C P +R K+IV
Sbjct: 269 -----MPVDSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 140
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E +AT Y APE
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 195
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 196 YNQTVDIWSVGCIMAELLT 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DFG+A+ E +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 75/263 (28%)
Query: 8 IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVF---KSFDVECEMMKSI-HHRN 57
+GRG FG V +A + VAVK+ L+ G ++ E +++ I HH N
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 85
Query: 58 IIKVISSCSNEEFKALVL-EYMPHGSLEKYLHSS------------------NYI----L 94
++ ++ +C+ +V+ E+ G+L YL S +Y+ +
Sbjct: 86 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 145
Query: 95 DIYQRLNI-----------------MIDVAS------------TLEYL-----------H 114
D+ +RL+ + DV TLE+L
Sbjct: 146 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 205
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
F S + IH DL N+LL + V + DFG+A+ + ++ + + +MAPE
Sbjct: 206 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 265
Query: 175 KEGRVSANGDVYSFGIMLIETFT 197
+ + DV+SFG++L E F+
Sbjct: 266 FDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 45/298 (15%)
Query: 2 FSENNL-----IGRGGFGSVFKA------RLGDGMEVAVKVFNLQYGRVFK-SFDVECEM 49
F N L +G G FG V +A + M VAVK+ + + E ++
Sbjct: 36 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 95
Query: 50 MKSI-HHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLH----------SSNYILDIYQ 98
+ + +H NI+ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 96 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 99 RLNIMIDVAS----TLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED 154
+ D+ S + + F S IH DL N+LL + + DFG+A+ + +
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH 214
++ + +MAPE + DV+S+GI L E F+ + G
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL---GSSPYPG------ 266
Query: 215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV 272
+P+ +K + +E ++ E + ++++ C P +R K+IV
Sbjct: 267 -----MPVDSKFYK----MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 8 IGRGGFGSV---FKARLGDGMEVAVKVFNLQYGRVFKSFDV--ECEMMKSIHHRNIIKVI 62
+G G +GSV + ARL +VAVK + + + + E ++K + H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 63 ----SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ S E+F + L G+ + + D + + ++ + L+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG- 177
A +IH DLKPSNV ++++ + DFG+A+ E T +AT Y APE
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPEIMLNWM 204
Query: 178 RVSANGDVYSFGIMLIETFTRK 199
+ D++S G ++ E K
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G+ VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + D G+A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 133
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 190
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 191 EPLGLEADMWSIGVI 205
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 133
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 190
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 191 EPLGLEADMWSIGVI 205
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 17/232 (7%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKV-----FNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+IG+G F V + G + AVK+ F G + E + + H +I++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
++ + S++ +V E+M L + +Y + LE L + +
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 121 VIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
+IH D+KP NVLL +++ L DFG+A L + + + T +MAPE K
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKRE 208
Query: 178 RVSANGDVYSFGIMLIETFTRKKP----TDEIFNGEMTLKHWVN--DWLPIS 223
DV+ G++L + P + +F G + K+ +N W IS
Sbjct: 209 PYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 260
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 5 NNLIGRGGFGSVFKA-RLGDGMEVAVKVFNLQYG----RVFKSFDVECEMMKSIHHRNII 59
+ L+G G + V A L +G E AVK+ Q G RVF+ + + + ++NI+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET---LYQCQGNKNIL 74
Query: 60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
++I ++ LV E + GS+ ++ + + + ++ DVA+ L++LH +
Sbjct: 75 ELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLH---TK 130
Query: 120 QVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTREDIST-IQTQTLAT----IGYMAP 171
+ H DLKP N+L + + DF + + + T I T L T YMAP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 172 EY-----GKEGRVSANGDVYSFGIML 192
E + D++S G++L
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVL 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 17/199 (8%)
Query: 2 FSENNLIGRGGFGSVF--KARLGDGMEVAVKVFN---LQYGRVFKSFDVECEMMKSIHHR 56
+ ++G+G FG V K ++ G E AVKV + ++ +S E +++K + H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
NI K+ ++ + LV E G L + S ++ I+ V S + Y H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYXH-- 143
Query: 117 YSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY 173
+++H DLKP N+LL+ + + DFG++ T + S + T Y+APE
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIAPEV 199
Query: 174 GKEGRVSANGDVYSFGIML 192
G DV+S G++L
Sbjct: 200 -LHGTYDEKCDVWSTGVIL 217
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 35/223 (15%)
Query: 8 IGRGGFG---SVFKARLGDGMEVAVKVFNLQY------GRVFKSFDVECEMMKSIHHRNI 58
IG G G + F LG + VAVK + + R ++ E ++K ++H+NI
Sbjct: 30 IGSGAQGIVCAAFDTVLG--INVAVKKLSRPFQNQTHAKRAYR----ELVLLKCVNHKNI 83
Query: 59 IKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
I +++ + EEF+ LV+E M +L + +H LD + ++ + +++
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKH 139
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE 172
LH SA +IH DLKPSN+++ + + DFG+A+ + + + T + T Y APE
Sbjct: 140 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS---TNFMMTPYVVTRYYRAPE 193
Query: 173 YGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
N D++S G ++ E IF G + W
Sbjct: 194 VILGMGYKENVDIWSVGCIMGELVK----GSVIFQGTDHIDQW 232
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFDVEC-----EMMKSIHHRNIIK 60
+IGRG FG V +L + +V A+K+ N + K + C +++ + + I
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILN--KWEMLKRAETACFREERDVLVNGDSKWITT 138
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNI--MIDVASTLEYLHFGY 117
+ + ++ LV++Y G L L + + + R + M+ ++ LH+
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-- 196
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEY---- 173
+H D+KP N+L+D N L+DFG + L ED + + + T Y++PE
Sbjct: 197 ----VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 174 -GKEGRVSANGDVYSFGIMLIETFTRKKP 201
G +GR D +S G+ + E + P
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 28/159 (17%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
I+ V ++ Y+H + H D+KPSN+L+D N LSDFG ++ + + I
Sbjct: 156 IIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG---- 209
Query: 162 TLATIGYMAPEYGKEGRVSANG---DVYSFGIML------IETFTRKKPTDEIFNG---- 208
+ T +M PE+ S NG D++S GI L + F+ K E+FN
Sbjct: 210 SRGTYEFMPPEFF-SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268
Query: 209 ----EMTLKHWVNDWLPISTKE-IVDPNLLSREDIHFVA 242
+ H++ P++ K+ N LS EDI F+
Sbjct: 269 NIEYPLDRNHFL---YPLTNKKSTCSNNFLSNEDIDFLK 304
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 7 LIGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKS-----IHHRNIIK 60
++G+G FG V R G AVK+ L+ V + DVEC M++ +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 61 VISSC-SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ SC + V+EY+ G L ++ + ++ + + A L F S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+I+ DLK NV+LD ++DFG+ K + ++T T Y+APE
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAPEIIAYQPY 198
Query: 180 SANGDVYSFGIMLIETFTRKKP-----TDEIFNGEM 210
+ D ++FG++L E + P DE+F M
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+LE + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRN 57
+ +G+GGF ++ D EV A KV L + E + KS+ + +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++ +++F +VLE SL + LH + + M ++YLH
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH--- 143
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
+ +VIH DLK N+ L+D+M + DFG+A T+ + + + L T Y+APE +
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 177 GRVSANGDVYSFGIMLIETFTRKKP 201
S D++S G +L K P
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ +
Sbjct: 211 LSKGYNKAVDWWALGVLIYQ 230
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+++D ++DFG AK ++ +T G Y+APE
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 ISKGYNKAVDWWALGVLIYE 230
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 23/202 (11%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
S +I+ DLKP N+L+D ++DFG AK ++ +T G PEY
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG--TPEYLAPA 208
Query: 178 RVSANG-----DVYSFGIMLIE 194
+ + G D ++ G+++ E
Sbjct: 209 IILSKGYNKAVDWWALGVLIYE 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 121
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 122 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 175
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 122
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 176
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 122
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 176
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRN 57
+ +G+GGF ++ D EV A KV L + E + KS+ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++ +++F +VLE SL + LH + + M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
+ +VIH DLK N+ L+D+M + DFG+A T+ + + + L T Y+APE +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 177 GRVSANGDVYSFGIMLIETFTRKKP 201
S D++S G +L K P
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFD-VECE---MMKSIHHRNIIKV 61
+IGRG + V RL + A+KV + + D V+ E ++ +H ++ +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
S E V+EY+ G L ++ + + + R +++ L YLH +
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 142
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 200
Query: 182 NGDVYSFGIMLIETFTRKKPTD 203
+ D ++ G+++ E + P D
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFD 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 7 LIGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKS-----IHHRNIIK 60
++G+G FG V R G AVK+ L+ V + DVEC M++ +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 61 VISSC-SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ SC + V+EY+ G L ++ + ++ + + A L F S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
+I+ DLK NV+LD ++DFG+ K + ++T T Y+APE
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT--KXFCGTPDYIAPEIIAYQPY 519
Query: 180 SANGDVYSFGIMLIETFTRKKP-----TDEIFNGEM 210
+ D ++FG++L E + P DE+F M
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFD-VECE---MMKSIHHRNIIKV 61
+IGRG + V RL + A+KV + + D V+ E ++ +H ++ +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
S E V+EY+ G L ++ + + + R +++ L YLH +
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 127
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 185
Query: 182 NGDVYSFGIMLIETFTRKKPTD 203
+ D ++ G+++ E + P D
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFD 207
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 127
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 128 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 181
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 129
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 183
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 129
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 183
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 235
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFK------SFDVECEMMKSIHHRNIIK 60
+G G F V K R G+E A K + R + + E +++ + H NII
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N L+LE + G L +L + L + + + + + YLH + +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 121 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N+ LLD N+ + H+ DFG+A + ED + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGTPEFVAPEIVNY 192
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFD-VECE---MMKSIHHRNIIKV 61
+IGRG + V RL + A+KV + + D V+ E ++ +H ++ +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
S E V+EY+ G L ++ + + + R +++ L YLH +
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 131
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPNYIAPEILRGEDYGF 189
Query: 182 NGDVYSFGIMLIETFTRKKPTD 203
+ D ++ G+++ E + P D
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFD 211
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G+++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 166
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 167 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 220
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 2 FSENNLIGRGGFGSVFKARLGDGMEV-AVKVFN---LQYGRVFKSFDVECEMMKSIHHRN 57
+ +G+GGF ++ D EV A KV L + E + KS+ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++ +++F +VLE SL + LH + + M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLH--- 159
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL-ATIGYMAPEYGKE 176
+ +VIH DLK N+ L+D+M + DFG+A T+ + + + L T Y+APE +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA---TKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 177 GRVSANGDVYSFGIMLIETFTRKKP 201
S D++S G +L K P
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ + EEF+ LV+E M +L + + LD +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 166
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 167 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 220
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQW 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 49 MMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVAS 108
+++ H NII + + ++ +V E G L + + + + ++ +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITK 127
Query: 109 TLEYLHFGYSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTREDISTIQTQTLA 164
T+EYLH + V+H DLKPSN+L D + DFG AK L E+ +
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLXTPCY 182
Query: 165 TIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
T ++APE + A D++S G++L T P
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G+++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQYGRVF--KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G VAVK + + + K E ++K + H N+I ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 63 --SSCSNEEFKALVL-EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ S EEF + L ++ L + D Q L + + L+Y+H SA
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 144
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-R 178
+IH DLKPSN+ ++++ + DF +A+ E T +AT Y APE
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 199
Query: 179 VSANGDVYSFGIMLIETFT 197
+ D++S G ++ E T
Sbjct: 200 YNQTVDIWSVGCIMAELLT 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFK------SFDVECEMMKSIHHRNIIK 60
+G G F V K R G+E A K + R + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N L+LE + G L +L + L + + + + + YLH + +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 121 VIHCDLKPSNV-LLDDNM-VAH--LSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N+ LLD N+ + H L DFG+A + ED + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGTPEFVAPEIVNY 192
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFK------SFDVECEMMKSIHHRNIIK 60
+G G F V K R G+E A K + R + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N L+LE + G L +L + L + + + + + YLH + +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 121 VIHCDLKPSNV-LLDDNM-VAH--LSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N+ LLD N+ + H L DFG+A + ED + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGTPEFVAPEIVNY 192
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 83/199 (41%), Gaps = 16/199 (8%)
Query: 2 FSENNLIGRGGFGSVFKARLG-DGMEVAVK----VFNLQYGRVFKSFDVECEMMKSIHHR 56
F + +G G +G VFK R DG AVK F R K +V K H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHE-KVGQHP 117
Query: 57 NIIKVISSCSNEEFKALVLEYMPHG-SLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHF 115
+++ + EE L L+ G SL+++ + L Q + D L +LH
Sbjct: 118 CCVRLEQAW--EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH- 174
Query: 116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
S ++H D+KP+N+ L L DFG+ L +Q YMAPE
Sbjct: 175 --SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPEL-L 228
Query: 176 EGRVSANGDVYSFGIMLIE 194
+G DV+S G+ ++E
Sbjct: 229 QGSYGTAADVFSLGLTILE 247
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR-EDISTI 158
L+I I +A +E+LH S ++H DLKPSN+ + V + DFG+ + + E+ T+
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 159 QTQTLA---------TIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T A T YM+PE S D++S G++L E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH 114
H NI+K+ ++ LV+E + G L + + + + + IM + S + ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 115 FGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
V+H DLKP N+L +DN+ + DFG A+ L D ++T T+ Y AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCF-TLHYAAP 178
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E + + D++S G++L + + P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFK------SFDVECEMMKSIHHRNIIK 60
+G G F V K R G+E A K + R + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N L+LE + G L +L + L + + + + + YLH + +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 121 VIHCDLKPSNV-LLDDNM-VAH--LSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N+ LLD N+ + H L DFG+A + ED + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGTPEFVAPEIVNY 192
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFK------SFDVECEMMKSIHHRNIIK 60
+G G F V K R G+E A K + R + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N L+LE + G L +L + L + + + + + YLH + +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 121 VIHCDLKPSNV-LLDDNM-VAH--LSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N+ LLD N+ + H L DFG+A + ED + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGTPEFVAPEIVNY 192
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFK------SFDVECEMMKSIHHRNIIK 60
+G G F V K R G+E A K + R + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N L+LE + G L +L + L + + + + + YLH + +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLH---TKK 135
Query: 121 VIHCDLKPSNV-LLDDNM-VAH--LSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N+ LLD N+ + H L DFG+A + ED + T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKN-IFGTPEFVAPEIVNY 192
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 13/194 (6%)
Query: 2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
F + +GRG V++ + G A+KV + K E ++ + H NIIK
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ +LVLE + G L + Y Y + V LE + + +
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGY----YSERDAADAVKQILEAVAYLHENG 168
Query: 121 VIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
++H DLKP N+L + ++DFG++K++ + + T GY APE +
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGC 225
Query: 178 RVSANGDVYSFGIM 191
D++S GI+
Sbjct: 226 AYGPEVDMWSVGII 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIH 54
F L+G+G FG V R G A+K+ + V + D E ++++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASTLEYL 113
H + + + + V+EY G L + H S + +R ++ S LEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL--ATIGYMAP 171
H S V++ D+K N++LD + ++DFG+ K E IS T T Y+AP
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAP 174
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E ++ D + G+++ E + P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIH 54
F L+G+G FG V R G A+K+ + V + D E ++++
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 68
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASTLEYL 113
H + + + + V+EY G L + H S + +R ++ S LEYL
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL--ATIGYMAP 171
H S V++ D+K N++LD + ++DFG+ K E IS T T Y+AP
Sbjct: 127 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAP 179
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E ++ D + G+++ E + P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 46 ECEMMKSIHHRNIIKVISSCSNEEFKAL--VLEYMPHGSLEKYLHSSNYILDIYQRLNIM 103
E ++++ + H+N+I+++ NEE + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 104 IDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL 163
+ LEYLH S ++H D+KP N+LL +S G+A+ L +
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 164 ATIGYMAPEYGKEGRVSANG---DVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN 217
+ + PE G + +G D++S G+ L T P F G+ K + N
Sbjct: 173 GSPAFQPPEIAN-GLDTFSGFKVDIWSAGVTLYNITTGLYP----FEGDNIYKLFEN 224
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIH 54
F L+G+G FG V R G A+K+ + V + D E ++++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASTLEYL 113
H + + + + V+EY G L + H S + +R ++ S LEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAP 171
H S V++ D+K N++LD + ++DFG+ K E IS T T Y+AP
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYLAP 174
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E ++ D + G+++ E + P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFD-VECE---MMKSIHHRNIIKV 61
+IGRG + V RL + A++V + + D V+ E ++ +H ++ +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQV 121
S E V+EY+ G L ++ + + + R +++ L YLH +
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 174
Query: 122 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSA 181
I+ DLK NVLLD L+D+G+ K R +T + T Y+APE +
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--STFCGTPNYIAPEILRGEDYGF 232
Query: 182 NGDVYSFGIMLIETFTRKKPTD 203
+ D ++ G+++ E + P D
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFD 254
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIH 54
F L+G+G FG V R G A+K+ + V + D E ++++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASTLEYL 113
H + + + + V+EY G L + H S + +R ++ S LEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL--ATIGYMAP 171
H S V++ D+K N++LD + ++DFG+ K E IS T T Y+AP
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAP 174
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E ++ D + G+++ E + P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN-------LQYGRVFKSFDV----ECEMMKSIH 54
+IGRG FG V ++ + + A+K+ N + + DV +C+ + ++H
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNI--MIDVASTLE 111
+ + +E LV++Y G L L + + + R I M+ ++
Sbjct: 141 Y--------AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ-TLATIGYMA 170
LH+ +H D+KP NVLLD N L+DFG L D T+Q+ + T Y++
Sbjct: 193 QLHY------VHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYIS 244
Query: 171 PEYGKE-----GRVSANGDVYSFGIMLIETFTRKKP 201
PE + G+ D +S G+ + E + P
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIH 54
F L+G+G FG V R G A+K+ + V + D E ++++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASTLEYL 113
H + + + + V+EY G L + H S + +R ++ S LEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTL--ATIGYMAP 171
H S V++ D+K N++LD + ++DFG+ K E IS T T Y+AP
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKXFCGTPEYLAP 174
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E ++ D + G+++ E + P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 122
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 176
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 228
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIH 54
F L+G+G FG V R G A+K+ + V + D E ++++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 63
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASTLEYL 113
H + + + + V+EY G L + H S + +R ++ S LEYL
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAP 171
H S V++ D+K N++LD + ++DFG+ K E IS T T Y+AP
Sbjct: 122 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYLAP 174
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E ++ D + G+++ E + P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 78 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 133
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 134 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 187
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 188 TPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 239
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIH 54
F L+G+G FG V R G A+K+ + V + D E ++++
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKE---VIIAKDEVAHTVTESRVLQNTR 66
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIM-IDVASTLEYL 113
H + + + + V+EY G L + H S + +R ++ S LEYL
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 114 HFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQT--LATIGYMAP 171
H S V++ D+K N++LD + ++DFG+ K E IS T T Y+AP
Sbjct: 125 H---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPEYLAP 177
Query: 172 EYGKEGRVSANGDVYSFGIMLIETFTRKKP 201
E ++ D + G+++ E + P
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 7 LIGRGGFGSVFKARLGDGMEV-AVKVFN-------LQYGRVFKSFDV----ECEMMKSIH 54
+IGRG FG V ++ + + A+K+ N + + DV +C+ + ++H
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 55 HRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNI--MIDVASTLE 111
+ + +E LV++Y G L L + + + R I M+ ++
Sbjct: 157 Y--------AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 112 YLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ-TLATIGYMA 170
LH+ +H D+KP NVLLD N L+DFG L D T+Q+ + T Y++
Sbjct: 209 QLHY------VHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYIS 260
Query: 171 PEYGKE-----GRVSANGDVYSFGIMLIETFTRKKP 201
PE + G+ D +S G+ + E + P
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 8 IGRGGFGSVFKARLG-DGMEVAVKVF--NLQYGRVFKSFDVECEMMKSIHHRNIIKVISS 64
+G G +G+V A G G +VA+K Q K E ++K + H N+I ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 65 CSNEEFKA------LVLEYMPH--GSLEKY--LHSSNYILDIYQRLNIMIDVASTLEYLH 114
+ +E LV+ +M G L K+ L +YQ L L Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLK-------GLRYIH 145
Query: 115 FGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG 174
+A +IH DLKP N+ ++++ + DFG+A+ E + T+ Y APE
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVI 197
Query: 175 KEG-RVSANGDVYSFGIMLIETFTRK 199
R + D++S G ++ E T K
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 101 NIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT 160
+ + + L YL + VIH D+KPSN+LLD+ L DFGI+ L + +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD---KAKD 182
Query: 161 QTLATIGYMAPEY-----GKEGRVSANGDVYSFGIMLIETFTRKKP 201
++ YMAPE + DV+S GI L+E T + P
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFD---VECEMMKSIHHRN 57
F +G G FG V + + G A+K+ + Q K + E ++++++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 58 IIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY 117
++K+ S + +V+EY+ G + +L + + R + T EYLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH--- 158
Query: 118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIG---YMAPEYG 174
S +I+ DLKP N+L+D ++DFG AK ++ +T G +APE
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEALAPEII 210
Query: 175 KEGRVSANGDVYSFGIMLIE 194
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 18/195 (9%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVKVF------NLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+G G F V K R G++ A K + + G + + E ++K I H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
+ N+ L+ E + G L +L + + + + + + + YLH S Q
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTE-EEATEFLKQILNGVYYLH---SLQ 134
Query: 121 VIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE 176
+ H DLKP N++L D V + DFG+A + D T ++APE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNY 191
Query: 177 GRVSANGDVYSFGIM 191
+ D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMM-KSIHHRNIIKVISSC 65
++G G G+V G VAVK + + + +E +++ +S H N+I+ S
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCSE 78
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 79 TTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 120 QVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLT--REDISTIQTQTLA 164
++IH DLKP N+L+ +N+ +SDFG+ K L + T
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 165 TIGYMAPEYGKEG-------RVSANGDVYSFGIMLIETFTRKK 200
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 183 TPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 42 SFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLN 101
S + E +++ I H NI+ + + LV++ + G L + + Y +
Sbjct: 66 SIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF----YTEKD 121
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTI 158
+ L+ +++ + ++H DLKP N+L D+ +SDFG++K+ + D +
Sbjct: 122 ASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---V 178
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIM 191
+ T GY+APE + S D +S G++
Sbjct: 179 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 8 IGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV----- 61
+G GG G VF A D VA+K L + K E ++++ + H NI+KV
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 62 ---------ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEY 112
+ S + +V EYM L L +L+ + RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGP-LLEEHARL-FMYQLLRGLKY 135
Query: 113 LHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLL 150
+H SA V+H DLKP+N+ ++ +++V + DFG+A+++
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 6 NLIGRGGFGSVFKARLGD-GMEVAVKVFN----LQYGRVFKSFDVECEMMKSIHHRNIIK 60
+IGRG F V ++ G A+K+ N L+ G V F E +++ + R I +
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEV-SCFREERDVLVNGDRRWITQ 125
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH-FGYSA 119
+ + +E + LV+EY G L L + + ++ ++ +H GY
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY-- 183
Query: 120 QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPE------- 172
+H D+KP N+LLD L+DFG + L R D + + T Y++PE
Sbjct: 184 --VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGG 240
Query: 173 YGKEGRVSANGDVYSFGIMLIETFTRKKP 201
G D ++ G+ E F + P
Sbjct: 241 GPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 129
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 183
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
+ T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 40/226 (17%)
Query: 2 FSENNLIGRGGFGSVFKARLGD-GMEVAVK------------VFNLQYGRVFKSFDVECE 48
+S + +G G FG V+ A + EV VK + + + G+V +E
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV----TLEIA 81
Query: 49 MMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGS-LEKYLHSSNYILDIYQRLN------ 101
++ + H NIIKV+ N+ F LV+E HGS L+ + +D + RL+
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEK--HGSGLDLFA-----FIDRHPRLDEPLASY 134
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQ 161
I + S + YL +IH D+K N+++ ++ L DFG A L R +
Sbjct: 135 IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER---GKLFYT 188
Query: 162 TLATIGYMAPE--YGKEGRVSANGDVYSFGIMLIETFTRKKPTDEI 205
TI Y APE G R +++S G+ L + P E+
Sbjct: 189 FCGTIEYCAPEVLMGNPYR-GPELEMWSLGVTLYTLVFEENPFCEL 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECE--MMKSIHH--RN 57
L+G GGFGSV+ R+ D + VA+K +G + V E ++K +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 58 IIKVISSCSNEEFKALVLEYM-PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
+I+++ + L+LE M P L ++ + + R LE +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHC 130
Query: 117 YSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
++ V+H D+K N+L+D N L DFG LL T+ T T Y PE+ +
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 186
Query: 176 ----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 187 YHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 92/233 (39%), Gaps = 34/233 (14%)
Query: 8 IGRGGFGSVFKAR-LGDGMEVAVK-----VFNLQYGRVFKSFD-----VECEMMKSIHHR 56
+GRG +G V K R + G AVK V + + R+ D V+C + +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFY-- 99
Query: 57 NIIKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRL------NIMIDVASTL 110
E + + SL+K+ ++D Q + I + + L
Sbjct: 100 -------GALFREGDVWICXELXDTSLDKFYKQ---VIDKGQTIPEDILGKIAVSIVKAL 149
Query: 111 EYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT--QTLATIGY 168
E+LH S VIH D+KPSNVL++ DFGI+ L + I +
Sbjct: 150 EHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPER 207
Query: 169 MAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLP 221
+ PE ++G S D++S GI IE + P D LK V + P
Sbjct: 208 INPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSP 259
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 128
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 182
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHW 215
+ T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 EPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQW 234
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG R E+ + + ++ + E +S+ H NI++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 68 EEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVASTLEYLHFGYSAQVI 122
A+V+EY G L E+ ++ + D +Q+L S + Y H + QV
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQVC 137
Query: 123 HCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDISTIQTQTLATIG---YMAPE--YGK 175
H DLK N LLD + L DFG +K S + +Q +T+G Y+APE K
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 176 E--GRVSANGDVYSFGIML 192
E G+V+ DV+S G+ L
Sbjct: 192 EYDGKVA---DVWSCGVTL 207
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG R E+ + + ++ ++ E +S+ H NI++
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 68 EEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVASTLEYLHFGYSAQVI 122
A+V+EY G L E+ ++ + D +Q+L S + Y H + QV
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCH---AMQVC 136
Query: 123 HCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDISTIQTQTLATIG---YMAPE--YGK 175
H DLK N LLD + L DFG +K S + +Q +T+G Y+APE K
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEVLLKK 190
Query: 176 E--GRVSANGDVYSFGIML 192
E G+V+ DV+S G+ L
Sbjct: 191 EYDGKVA---DVWSCGVTL 206
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTI 158
IM D+ + +++LH S + H D+KP N+L + + V L+DFG AK T+ + T
Sbjct: 114 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT- 169
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T Y+APE + + D++S G+++
Sbjct: 170 ---PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTI 158
IM D+ + +++LH S + H D+KP N+L + + V L+DFG AK T+ + T
Sbjct: 133 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT- 188
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T Y+APE + + D++S G+++
Sbjct: 189 ---PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMM-KSIHHRNIIKVISSC 65
++G G G+V G VAVK + + + +E +++ +S H N+I+ S
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCSE 96
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 97 TTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 120 QVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLT--REDISTIQTQTLA 164
++IH DLKP N+L+ +N+ +SDFG+ K L +
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 165 TIGYMAPEYGKEG---RVSANGDVYSFGIMLIETFTRKK 200
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY-GRVF-KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G +VA+K + + +F K E ++K + H N+I ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 63 ----SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
SS N LV+ +M L+K + + I V L+ L + +S
Sbjct: 92 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGLK------FSEEKIQYLVYQMLKGLKYIHS 144
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG- 177
A V+H DLKP N+ ++++ + DFG+A+ E T + T Y APE
Sbjct: 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWM 199
Query: 178 RVSANGDVYSFGIMLIETFTRK 199
+ D++S G ++ E T K
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 8 IGRGGFGSVFKA-RLGDGMEVAVKVFNLQY-GRVF-KSFDVECEMMKSIHHRNIIKVI-- 62
+G G +GSV A G +VA+K + + +F K E ++K + H N+I ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 63 ----SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
SS N LV+ +M L+K + + I V L+ L + +S
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGME------FSEEKIQYLVYQMLKGLKYIHS 162
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG- 177
A V+H DLKP N+ ++++ + DFG+A+ E T + T Y APE
Sbjct: 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSWM 217
Query: 178 RVSANGDVYSFGIMLIETFTRK 199
+ D++S G ++ E T K
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMM-KSIHHRNIIKVISSC 65
++G G G+V G VAVK + + + +E +++ +S H N+I+ S
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCSE 96
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 97 TTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 120 QVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLT--REDISTIQTQTLA 164
++IH DLKP N+L+ +N+ +SDFG+ K L +
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 165 TIGYMAPEYGKEG---RVSANGDVYSFGIMLIETFTRKK 200
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
IG G FG R E+ + + ++ ++ E +S+ H NI++
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 68 EEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVASTLEYLHFGYSAQVI 122
A+V+EY G L E+ ++ + D +Q+L S + Y H + QV
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYAH---AMQVA 137
Query: 123 HCDLKPSNVLLDDNMVAHL--SDFGIAKLLTREDISTIQTQTLATIG---YMAPE--YGK 175
H DLK N LLD + L +DFG +K S + +Q + +G Y+APE K
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSKA------SVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 176 E--GRVSANGDVYSFGIML 192
E G+V+ DV+S G+ L
Sbjct: 192 EYDGKVA---DVWSCGVTL 207
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 90/237 (37%), Gaps = 56/237 (23%)
Query: 8 IGRGGFGSVFKARLGDGMEV-AVKVFNLQYGRVFKSFDVE-----CEMMKSIHHRNIIKV 61
IG+G +G V A + A+K+ N R DVE +MK +HH NI ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 62 ISSCSNEEFKALVLEYMPHG------------------------------------SLEK 85
+E++ LV+E + HG ++
Sbjct: 94 YEVYEDEQYICLVME-LCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 86 YLHSSNYILDIYQR----LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN--MVA 139
+H LD QR NIM + S L YLH + + H D+KP N L N
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEI 209
Query: 140 HLSDFGIAKLLTREDISTI--QTQTLATIGYMAPEYGKEGRVS--ANGDVYSFGIML 192
L DFG++K + + T T ++APE S D +S G++L
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 46 ECEMMKSIHHRNIIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLHSSNYILDIYQR 99
E +MK ++H+NII +++ S EEF+ +V+E M +L + + LD +
Sbjct: 75 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME---LDHERM 130
Query: 100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ 159
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S +
Sbjct: 131 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 184
Query: 160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIE 194
+ T Y APE N D++S G ++ E
Sbjct: 185 VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 219
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 36/223 (16%)
Query: 7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMM-KSIHHRNIIKVISSC 65
++G G G+V G VAVK + + + +E +++ +S H N+I+ S
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRYYCSE 78
Query: 66 SNEEFKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASTLEYLHFGYSA 119
+ + F + LE + + +L+ + S N + Y ++++ +AS + +LH S
Sbjct: 79 TTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 120 QVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLLT--REDISTIQTQTLA 164
++IH DLKP N+L+ +N+ +SDFG+ K L +
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 165 TIGYMAPEYGKEG-------RVSANGDVYSFGIMLIETFTRKK 200
T G+ APE +E R++ + D++S G + ++ K
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 27/223 (12%)
Query: 2 FSENNLIGRGGFGSV-FKARLGDGMEVAVKVFNLQYGRVFKSFDVEC-EMMKSIHHRNII 59
F + G+G FG+V GM VA+K +Q R F++ +++ + + +HH NI+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPR-FRNRELQIMQDLAVLHHPNIV 82
Query: 60 KVIS-------SCSNEEFKALVLEYMP---HGSLEKYLHSSNYILDIYQRLNIMIDVAST 109
++ S + + +V+EY+P H Y I ++ + + +
Sbjct: 83 QLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV-FLFQLIRS 141
Query: 110 LEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTREDISTIQTQTLATIGY 168
+ LH S V H D+KP NVL+++ + L DFG AK L+ S + + Y
Sbjct: 142 IGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS---PSEPNVAYICSRYY 197
Query: 169 MAPE--YGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGE 209
APE +G + +A D++S G + E + IF G+
Sbjct: 198 RAPELIFGNQHYTTA-VDIWSVGCIFAEMML----GEPIFRGD 235
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 6 NLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIHHRNI 58
L+G+G FG V + G A+K+ + V + D E ++++ H +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ S + V+EY G L +L + R ++ S L+YLH
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 270
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
V++ DLK N++LD + ++DFG+ K + D +T++T T Y+APE ++
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKT-FCGTPEYLAPEVLEDND 328
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
D + G+++ E + P
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 6 NLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYGRVFKSFD------VECEMMKSIHHRNI 58
L+G+G FG V + G A+K+ + V + D E ++++ H +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 59 IKVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS 118
+ S + V+EY G L +L + R ++ S L+YLH
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 267
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR 178
V++ DLK N++LD + ++DFG+ K + D +T++T T Y+APE ++
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKT-FCGTPEYLAPEVLEDND 325
Query: 179 VSANGDVYSFGIMLIETFTRKKP 201
D + G+++ E + P
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 21/195 (10%)
Query: 8 IGRGGFGSVF--KARLGDGMEVAVKVFNLQYGRVFKSFDV---ECEMMKSIHHRNIIKVI 62
+G G +G V K +L G E A+K+ + E ++K + H NI+K+
Sbjct: 29 LGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 63 SSCSNEEFKALVLEYMPHGSL--EKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
++ LV+E G L E L +D IM V S YLH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AVIMKQVLSGTTYLH---KHN 141
Query: 121 VIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
++H DLKP N+LL+ + + + DFG++ ++ + L T Y+APE ++
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRK- 197
Query: 178 RVSANGDVYSFGIML 192
+ DV+S G++L
Sbjct: 198 KYDEKCDVWSCGVIL 212
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 17/248 (6%)
Query: 8 IGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN 67
+GRG FG V + + + F G E ++ HRNI+ + S +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 68 EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLK 127
E ++ E++ + + +++S + L+ + ++ + V L++LH S + H D++
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIR 129
Query: 128 PSNVLLDDNMVAHLS--DFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDV 185
P N++ + + +FG A+ L D + Y APE + VS D+
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTATDM 186
Query: 186 YSFGIML------IETF---TRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE 236
+S G ++ I F T ++ + I N E T + I + VD L+
Sbjct: 187 WSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKER 246
Query: 237 DIHFVAKE 244
A E
Sbjct: 247 KSRMTASE 254
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 40/203 (19%)
Query: 8 IGRGGFG--SVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMM--KSIHHRNIIKVIS 63
IG G FG + + +L + VAVK ++ G +V+ E++ +S+ H NI++
Sbjct: 28 IGSGNFGVARLMRDKLTKEL-VAVKY--IERGAAIDE-NVQREIINHRSLRHPNIVRFKE 83
Query: 64 SCSNEEFKALVLEYMPHGSL-EKYLHSSNYILD----IYQRLNIMIDVASTLEYLHFGYS 118
A+++EY G L E+ ++ + D +Q+L S + Y H S
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCH---S 134
Query: 119 AQVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTREDISTIQTQTLATIG---YMAPE- 172
Q+ H DLK N LLD + L DFG +K S + +Q +T+G Y+APE
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS------SVLHSQPKSTVGTPAYIAPEV 188
Query: 173 ---YGKEGRVSANGDVYSFGIML 192
+G+++ DV+S G+ L
Sbjct: 189 LLRQEYDGKIA---DVWSCGVTL 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 8 IGRGGFGSVF--KARLGDGMEVAVKVFNLQYGRVFKSFDV---ECEMMKSIHHRNIIKVI 62
+G G +G V K +L G E A+K+ + E ++K + H NI+K+
Sbjct: 12 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 63 SSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVI 122
++ LV+E G L + ++ + IM V S YLH ++
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLH---KHNIV 126
Query: 123 HCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRV 179
H DLKP N+LL+ + + + DFG++ ++ + L T Y+APE ++ +
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRK-KY 182
Query: 180 SANGDVYSFGIML 192
DV+S G++L
Sbjct: 183 DEKCDVWSCGVIL 195
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTI 158
IM + ++YLH S + H D+KP N+L N + L+DFG AK T +
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 173
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T+ T Y+APE + + D++S G+++
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 84 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 142
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 198
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 199 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 17/232 (7%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKV-----FNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+IG+G F V + G + AVK+ F G + E + + H +I++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
++ + S++ +V E+M L + +Y + LE L + +
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 121 VIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
+IH D+KP VLL +++ L FG+A L + + + T +MAPE K
Sbjct: 153 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKRE 210
Query: 178 RVSANGDVYSFGIMLIETFTRKKP----TDEIFNGEMTLKHWVN--DWLPIS 223
DV+ G++L + P + +F G + K+ +N W IS
Sbjct: 211 PYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 262
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 46 ECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL-EKYLHSSNYILDIYQRLNIMI 104
E ++K + H NI+K+ ++ LV+E G L ++ +H + + I+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF--NEVDAAVIIK 143
Query: 105 DVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTIQTQ 161
V S + YLH ++H DLKP N+LL+ + + + DFG++ + + +
Sbjct: 144 QVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ---KKMKE 197
Query: 162 TLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
L T Y+APE ++ + DV+S G++L
Sbjct: 198 RLGTAYYIAPEVLRK-KYDEKCDVWSIGVIL 227
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECE--MMKSIHH--RN 57
L+G GGFGSV+ R+ D + VA+K +G + V E ++K +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 58 IIKVISSCSNEEFKALVLEYM-PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
+I+++ + L+LE P L ++ + + R LE +
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHC 129
Query: 117 YSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
++ V+H D+K N+L+D N L DFG LL T+ T T Y PE+ +
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 185
Query: 176 EGRVSA-NGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
R + V+S GI+L + P +EI G++ + V+
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 17/232 (7%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKV-----FNLQYGRVFKSFDVECEMMKSIHHRNIIK 60
+IG+G F V + G + AVK+ F G + E + + H +I++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 61 VISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ 120
++ + S++ +V E+M L + +Y + LE L + +
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 121 VIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG 177
+IH D+KP VLL +++ L FG+A L + + + T +MAPE K
Sbjct: 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--VAGGRVGTPHFMAPEVVKRE 208
Query: 178 RVSANGDVYSFGIMLIETFTRKKP----TDEIFNGEMTLKHWVN--DWLPIS 223
DV+ G++L + P + +F G + K+ +N W IS
Sbjct: 209 PYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 260
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 82
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 83 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 141
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 197
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 198 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 247
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 69 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 183
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 184 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECE--MMKSIHH--RN 57
L+G GGFGSV+ R+ D + VA+K +G + V E ++K +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 58 IIKVISSCSNEEFKALVLEYM-PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG 116
+I+++ + L+LE P L ++ + + R LE +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHC 126
Query: 117 YSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGK 175
++ V+H D+K N+L+D N L DFG LL T+ T T Y PE+ +
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIR 182
Query: 176 EGRVSA-NGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
R + V+S GI+L + P +EI G++ + V+
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 228
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 84 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 142
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 198
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 199 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 67
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 68 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 126
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 182
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 183 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 232
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTI 158
IM + ++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 128 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 184
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T Y+APE + + D++S G+++
Sbjct: 185 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 68
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 69 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 183
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 184 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 233
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 97 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 155
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 211
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 212 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 96 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 154
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 210
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 211 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 260
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 96 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 154
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 210
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 211 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTI 158
IM + ++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 126 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 182
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T Y+APE + + D++S G+++
Sbjct: 183 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTI 158
IM + ++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 121 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 177
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T Y+APE + + D++S G+++
Sbjct: 178 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 83
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 84 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 142
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 198
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 199 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 248
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTI 158
IM + ++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T Y+APE + + D++S G+++
Sbjct: 179 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 97 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 155
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 211
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 212 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 82
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 83 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 141
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 197
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 198 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS 247
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 95
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 96 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 154
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 210
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 211 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 260
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 102 IMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDISTI 158
IM + ++YLH S + H D+KP N+L N + L+DFG AK T + T
Sbjct: 127 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 183
Query: 159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIML 192
T Y+APE + + D++S G+++
Sbjct: 184 PCYTPY---YVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 7 LIGRGGFGSVFKA-RLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKV 61
L+G GGFGSV+ R+ D + VA+K +G + V E++ ++K
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKK 96
Query: 62 ISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIY----QRLNIMIDVAST-----LEY 112
+SS + + L P S L + D++ +R + ++A + LE
Sbjct: 97 VSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 155
Query: 113 LHFGYSAQVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTREDISTIQTQTLATIGYMAP 171
+ ++ V+H D+K N+L+D N L DFG LL T+ T T Y P
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 211
Query: 172 EYGK----EGRVSANGDVYSFGIMLIETFTRKKP---TDEIFNGEMTLKHWVN 217
E+ + GR +A V+S GI+L + P +EI G++ + V+
Sbjct: 212 EWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS 261
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,276,511
Number of Sequences: 62578
Number of extensions: 333850
Number of successful extensions: 3357
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 878
Number of HSP's gapped (non-prelim): 1165
length of query: 285
length of database: 14,973,337
effective HSP length: 98
effective length of query: 187
effective length of database: 8,840,693
effective search space: 1653209591
effective search space used: 1653209591
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)