Query         039392
Match_columns 285
No_of_seqs    135 out of 1732
Neff          10.7
Searched_HMMs 29240
Date          Mon Mar 25 15:35:32 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039392.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039392hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-60 3.6E-65  392.1  17.4  258    1-281    14-290 (299)
  2 4aoj_A High affinity nerve gro 100.0 9.2E-60 3.2E-64  391.5  20.7  257    2-281    43-320 (329)
  3 3omv_A RAF proto-oncogene seri 100.0 2.1E-59 7.1E-64  384.5  21.3  260    2-282    38-302 (307)
  4 4fih_A Serine/threonine-protei 100.0 4.5E-60 1.5E-64  393.2  17.0  248    2-274    76-324 (346)
  5 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.7E-60 1.3E-64  388.1  14.1  249    1-274    33-285 (311)
  6 4b9d_A Serine/threonine-protei 100.0   8E-60 2.7E-64  392.2  15.5  249    1-274    25-277 (350)
  7 4g3f_A NF-kappa-beta-inducing  100.0 5.5E-59 1.9E-63  385.5  18.6  254    2-282    60-318 (336)
  8 4fie_A Serine/threonine-protei 100.0 8.2E-59 2.8E-63  394.6  17.3  248    2-274   153-401 (423)
  9 4gt4_A Tyrosine-protein kinase 100.0 5.9E-59   2E-63  383.2  15.3  254    2-278    28-304 (308)
 10 3fpq_A Serine/threonine-protei 100.0 4.5E-58 1.6E-62  373.9  19.6  245    3-274    29-283 (290)
 11 3hyh_A Carbon catabolite-derep 100.0 4.5E-58 1.6E-62  370.9  18.1  245    1-274    14-263 (275)
 12 3ubd_A Ribosomal protein S6 ki 100.0 4.6E-58 1.6E-62  375.6  10.8  247    1-274    25-282 (304)
 13 4ase_A Vascular endothelial gr 100.0 3.3E-56 1.1E-60  373.0  17.8  258    2-281    66-348 (353)
 14 3hmm_A TGF-beta receptor type- 100.0 1.1E-55 3.8E-60  364.4  18.6  270    2-281     5-298 (303)
 15 4g31_A Eukaryotic translation  100.0 4.3E-55 1.5E-59  359.3  18.0  249    1-274     6-280 (299)
 16 4f9c_A Cell division cycle 7-r 100.0 2.3E-53   8E-58  357.8  19.0  264    2-274    23-353 (361)
 17 4b99_A Mitogen-activated prote 100.0 3.4E-53 1.2E-57  360.5  17.9  267    2-274    56-345 (398)
 18 3uto_A Twitchin; kinase, muscl 100.0 6.5E-53 2.2E-57  375.0  18.4  251    1-274   158-411 (573)
 19 3v5w_A G-protein coupled recep 100.0   7E-52 2.4E-56  367.3  20.3  248    1-274   190-450 (689)
 20 2qkw_B Protein kinase; three-h 100.0 1.2E-49 4.2E-54  332.2  24.8  271    1-280    40-315 (321)
 21 3s95_A LIMK-1, LIM domain kina 100.0   3E-50   1E-54  334.4  20.2  261    1-282    11-284 (310)
 22 3fxz_A Serine/threonine-protei 100.0 5.1E-50 1.8E-54  330.9  20.2  249    1-274    21-270 (297)
 23 2psq_A Fibroblast growth facto 100.0 3.1E-49 1.1E-53  335.6  21.1  260    1-283    82-367 (370)
 24 3kul_A Ephrin type-A receptor  100.0 2.4E-49 8.2E-54  330.9  19.6  257    2-281    51-314 (325)
 25 3soc_A Activin receptor type-2 100.0 2.5E-49 8.6E-54  330.4  19.6  272    1-281    25-319 (322)
 26 3p86_A Serine/threonine-protei 100.0 1.5E-49   5E-54  329.8  17.9  257    1-282    38-300 (309)
 27 4hcu_A Tyrosine-protein kinase 100.0 1.6E-49 5.5E-54  323.5  17.6  257    1-282    11-268 (269)
 28 3cbl_A C-FES, proto-oncogene t 100.0 9.7E-50 3.3E-54  339.7  16.4  257    2-281   116-375 (377)
 29 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-49 5.3E-54  323.4  16.7  256    1-281     9-265 (268)
 30 3fe3_A MAP/microtubule affinit 100.0   2E-49 6.9E-54  331.3  17.2  246    1-274    16-265 (328)
 31 3ugc_A Tyrosine-protein kinase 100.0 1.2E-49 4.1E-54  328.4  14.4  273    1-282    11-293 (295)
 32 3uim_A Brassinosteroid insensi 100.0 2.3E-48 7.9E-53  325.2  21.9  267    1-277    31-308 (326)
 33 3tki_A Serine/threonine-protei 100.0 4.5E-49 1.5E-53  328.9  17.2  252    1-274     8-262 (323)
 34 3gen_A Tyrosine-protein kinase 100.0 7.6E-49 2.6E-53  321.8  18.0  256    1-281    25-281 (283)
 35 3lb7_A RAF proto-oncogene seri 100.0 3.2E-48 1.1E-52  321.6  21.0  261    1-282    37-302 (307)
 36 2yab_A Death-associated protei 100.0 1.2E-48   4E-53  330.3  18.5  250    1-274    13-273 (361)
 37 1tki_A Titin; serine kinase, m 100.0   9E-49 3.1E-53  326.7  17.3  250    1-274     6-258 (321)
 38 3zgw_A Maternal embryonic leuc 100.0 5.5E-49 1.9E-53  330.5  16.1  248    1-274    11-261 (347)
 39 3niz_A Rhodanese family protei 100.0 4.1E-48 1.4E-52  321.5  21.1  267    1-274    22-301 (311)
 40 2ivs_A Proto-oncogene tyrosine 100.0 3.6E-48 1.2E-52  322.3  19.4  258    1-281    24-312 (314)
 41 1o6l_A RAC-beta serine/threoni 100.0 3.1E-48 1.1E-52  325.0  18.9  247    1-274     6-261 (337)
 42 3vhe_A Vascular endothelial gr 100.0 1.6E-48 5.5E-53  330.3  17.4  260    1-282    23-357 (359)
 43 2qol_A Ephrin receptor; recept 100.0 2.4E-48 8.1E-53  330.4  18.3  258    1-281    46-310 (373)
 44 1luf_A Muscle-specific tyrosin 100.0 1.3E-48 4.5E-53  328.8  16.4  259    1-282    48-337 (343)
 45 3o0g_A Cell division protein k 100.0 8.7E-48   3E-52  316.9  20.5  268    1-274     3-283 (292)
 46 4eqm_A Protein kinase; transfe 100.0 2.2E-48 7.5E-53  320.7  16.5  259    1-280    12-275 (294)
 47 2c30_A Serine/threonine-protei 100.0 7.8E-48 2.7E-52  321.2  20.0  248    2-274    47-295 (321)
 48 1kob_A Twitchin; kinase, intra 100.0   7E-48 2.4E-52  328.4  20.1  251    1-274    52-305 (387)
 49 4euu_A Serine/threonine-protei 100.0 1.5E-47   5E-52  319.4  21.5  271    2-278    11-307 (319)
 50 3l9p_A Anaplastic lymphoma kin 100.0   1E-48 3.4E-53  332.2  14.7  258    1-281    72-346 (367)
 51 3qup_A Tyrosine-protein kinase 100.0 4.8E-48 1.6E-52  322.9  18.5  258    1-281    24-299 (323)
 52 1t46_A HOMO sapiens V-KIT hard 100.0 5.4E-48 1.9E-52  321.1  18.7  262    1-284    24-311 (313)
 53 3t9t_A Tyrosine-protein kinase 100.0 3.9E-48 1.3E-52  314.8  16.8  256    1-281     9-265 (267)
 54 3tt0_A Basic fibroblast growth 100.0 6.6E-48 2.3E-52  329.0  19.0  257    2-281    71-353 (382)
 55 2nru_A Interleukin-1 receptor- 100.0 5.7E-47   2E-51  314.1  23.9  267    3-281    34-307 (307)
 56 2y0a_A Death-associated protei 100.0 7.1E-48 2.4E-52  322.1  18.1  249    2-274    13-272 (326)
 57 3soa_A Calcium/calmodulin-depe 100.0 1.3E-47 4.4E-52  332.0  20.3  251    1-274    12-268 (444)
 58 1ob3_A PFPK5, cell division co 100.0   6E-48   2E-52  317.3  17.3  267    1-274     3-281 (288)
 59 3og7_A AKAP9-BRAF fusion prote 100.0 6.8E-48 2.3E-52  317.1  17.4  259    1-280    25-288 (289)
 60 1mp8_A Focal adhesion kinase 1 100.0 8.4E-48 2.9E-52  315.3  17.7  257    1-282    16-278 (281)
 61 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.2E-48 1.8E-52  323.4  16.6  245    1-274    10-259 (336)
 62 1rjb_A FL cytokine receptor; k 100.0 7.9E-48 2.7E-52  324.3  17.6  260    1-282    46-336 (344)
 63 4f0f_A Serine/threonine-protei 100.0 3.3E-47 1.1E-51  312.7  20.6  251    1-278    20-287 (287)
 64 3g2f_A Bone morphogenetic prot 100.0 1.2E-47 4.1E-52  322.1  18.3  276    1-285    14-323 (336)
 65 2bdw_A Hypothetical protein K1 100.0 1.3E-47 4.4E-52  324.6  18.4  250    1-274    30-285 (362)
 66 4fr4_A YANK1, serine/threonine 100.0 2.7E-47 9.2E-52  323.9  20.0  247    1-273    16-271 (384)
 67 3poz_A Epidermal growth factor 100.0 5.5E-48 1.9E-52  323.0  15.2  257    1-281    16-279 (327)
 68 4e5w_A Tyrosine-protein kinase 100.0 2.9E-48   1E-52  321.1  13.3  269    2-279    23-301 (302)
 69 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-47 7.6E-52  317.6  18.7  244    1-274     7-259 (318)
 70 2pvf_A Fibroblast growth facto 100.0 2.7E-47 9.4E-52  319.7  19.2  259    1-282    36-320 (334)
 71 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.1E-48 1.4E-52  326.2  14.2  246    1-273    24-280 (353)
 72 1csn_A Casein kinase-1; phosph 100.0 2.6E-47 8.9E-52  314.8  18.7  262    1-283    11-286 (298)
 73 3kmu_A ILK, integrin-linked ki 100.0 1.2E-47   4E-52  312.6  16.4  250    1-280    11-270 (271)
 74 3q4u_A Activin receptor type-1 100.0 8.9E-47   3E-51  312.1  21.8  263    1-278     9-300 (301)
 75 4dc2_A Protein kinase C IOTA t 100.0 4.6E-48 1.6E-52  329.7  14.2  251    1-273    53-318 (396)
 76 1u59_A Tyrosine-protein kinase 100.0 4.4E-47 1.5E-51  312.0  19.5  258    2-283    11-275 (287)
 77 2yex_A Serine/threonine-protei 100.0 4.4E-47 1.5E-51  310.1  19.4  252    1-274     8-262 (276)
 78 3c0i_A Peripheral plasma membr 100.0 9.7E-48 3.3E-52  324.3  15.7  250    2-274    26-287 (351)
 79 2izr_A Casein kinase I isoform 100.0 1.7E-47 5.9E-52  320.4  17.1  260    1-282    10-283 (330)
 80 3lxl_A Tyrosine-protein kinase 100.0 6.5E-48 2.2E-52  322.6  14.5  273    1-281    24-304 (327)
 81 2x4f_A Myosin light chain kina 100.0 3.3E-47 1.1E-51  323.3  19.0  247    5-274    94-343 (373)
 82 3f66_A Hepatocyte growth facto 100.0 6.1E-47 2.1E-51  312.7  20.1  259    2-283    27-294 (298)
 83 3dtc_A Mitogen-activated prote 100.0   9E-48 3.1E-52  313.4  14.6  249    1-278     8-271 (271)
 84 3brb_A Proto-oncogene tyrosine 100.0 5.4E-47 1.9E-51  315.1  19.4  259    1-282    35-310 (313)
 85 1k9a_A Carboxyl-terminal SRC k 100.0 4.8E-47 1.6E-51  330.0  19.8  250    2-282   195-447 (450)
 86 2w1i_A JAK2; chromosomal rearr 100.0   3E-47   1E-51  318.4  17.9  272    2-282    43-324 (326)
 87 3lzb_A Epidermal growth factor 100.0 1.9E-47 6.4E-52  319.7  16.4  257    1-281    16-279 (327)
 88 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-47 5.3E-52  316.3  15.7  248    1-274    14-293 (298)
 89 3kex_A Receptor tyrosine-prote 100.0 9.6E-48 3.3E-52  321.3  14.5  256    1-280    14-276 (325)
 90 3mdy_A Bone morphogenetic prot 100.0 4.7E-46 1.6E-50  312.5  24.6  264    1-282    38-333 (337)
 91 3gni_B Strad alpha; kinase fol 100.0 5.1E-47 1.8E-51  324.4  19.0  271    1-274    26-334 (389)
 92 3kfa_A Tyrosine-protein kinase 100.0 3.3E-47 1.1E-51  312.8  17.0  257    1-282    14-273 (288)
 93 3pls_A Macrophage-stimulating  100.0 1.9E-46 6.7E-51  309.6  21.3  260    2-283    23-290 (298)
 94 3a8x_A Protein kinase C IOTA t 100.0 5.5E-47 1.9E-51  318.6  18.3  251    1-273    10-275 (345)
 95 2buj_A Serine/threonine-protei 100.0 6.7E-47 2.3E-51  315.1  18.6  258    1-279    30-305 (317)
 96 3cc6_A Protein tyrosine kinase 100.0 5.7E-47 1.9E-51  310.3  17.8  256    1-281    13-274 (281)
 97 4fvq_A Tyrosine-protein kinase 100.0 1.1E-47 3.6E-52  315.8  13.3  250    1-280     9-275 (289)
 98 2wqm_A Serine/threonine-protei 100.0 1.7E-46 5.9E-51  311.7  20.7  259    1-281    33-298 (310)
 99 3op5_A Serine/threonine-protei 100.0 3.5E-47 1.2E-51  322.6  16.9  268    1-282    36-331 (364)
100 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-46 4.2E-51  312.1  19.6  254    1-282     9-265 (307)
101 2xir_A Vascular endothelial gr 100.0 6.7E-47 2.3E-51  314.9  18.0  261    1-283    28-313 (316)
102 1qcf_A Haematopoetic cell kina 100.0 1.7E-47   6E-52  333.2  15.1  253    2-280   190-444 (454)
103 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.1E-47 1.8E-51  319.3  17.4  244    1-274    42-294 (350)
104 2pmi_A Negative RE, cyclin-dep 100.0 7.3E-47 2.5E-51  314.9  18.0  267    1-274     6-294 (317)
105 3lxp_A Non-receptor tyrosine-p 100.0 2.6E-47   9E-52  317.7  15.4  271    2-283    33-313 (318)
106 2y94_A 5'-AMP-activated protei 100.0   1E-46 3.5E-51  328.4  19.3  246    1-274    17-267 (476)
107 3a62_A Ribosomal protein S6 ki 100.0 5.7E-47   2E-51  316.7  17.0  247    1-274    18-277 (327)
108 1xjd_A Protein kinase C, theta 100.0 1.6E-47 5.4E-52  321.6  13.7  246    1-273    18-269 (345)
109 3f3z_A Calcium/calmodulin-depe 100.0 8.8E-47   3E-51  308.6  17.7  248    2-274    11-262 (277)
110 3c1x_A Hepatocyte growth facto 100.0 6.1E-47 2.1E-51  321.5  17.3  259    2-283    91-358 (373)
111 1qpc_A LCK kinase; alpha beta  100.0 9.1E-47 3.1E-51  308.8  17.7  256    1-282    14-271 (279)
112 3dbq_A Dual specificity protei 100.0   3E-47   1E-51  320.6  15.2  249    2-274    11-274 (343)
113 3kk8_A Calcium/calmodulin depe 100.0 1.7E-46 5.8E-51  307.9  19.2  250    1-274     7-262 (284)
114 3v8s_A RHO-associated protein  100.0   7E-48 2.4E-52  330.2  11.4  251    1-274    70-330 (410)
115 2a2a_A Death-associated protei 100.0   1E-46 3.5E-51  314.6  18.1  249    2-274    14-273 (321)
116 3cok_A Serine/threonine-protei 100.0 1.2E-46   4E-51  308.0  18.0  248    1-274    12-263 (278)
117 4eut_A Serine/threonine-protei 100.0 8.2E-47 2.8E-51  323.7  17.9  274    2-281    11-310 (396)
118 2w4o_A Calcium/calmodulin-depe 100.0 7.8E-47 2.7E-51  318.5  17.4  248    2-274    55-306 (349)
119 2i0e_A Protein kinase C-beta I 100.0 5.9E-47   2E-51  319.0  16.3  247    1-274    21-277 (353)
120 2i1m_A Macrophage colony-stimu 100.0 9.5E-47 3.3E-51  316.3  17.3  260    1-282    47-328 (333)
121 3ork_A Serine/threonine protei 100.0 1.4E-47 4.7E-52  318.5  12.0  257    1-278    13-279 (311)
122 1p4o_A Insulin-like growth fac 100.0 4.8E-47 1.6E-51  316.6  15.3  257    1-280    26-299 (322)
123 2zmd_A Dual specificity protei 100.0 9.8E-47 3.3E-51  322.3  17.5  249    2-274    58-321 (390)
124 1mqb_A Ephrin type-A receptor  100.0 2.1E-46 7.1E-51  314.1  18.9  257    2-281    46-310 (333)
125 2h34_A Serine/threonine-protei 100.0 1.3E-46 4.3E-51  312.4  17.4  258    1-281    35-297 (309)
126 3uc3_A Serine/threonine-protei 100.0   8E-47 2.7E-51  319.8  16.4  251    1-274    21-275 (361)
127 4aw2_A Serine/threonine-protei 100.0 2.9E-47 9.9E-52  328.7  13.3  254    1-274    75-339 (437)
128 3mtl_A Cell division protein k 100.0 6.6E-47 2.3E-51  316.1  15.0  267    1-274     3-282 (324)
129 2eue_A Carbon catabolite derep 100.0 1.1E-46 3.6E-51  307.8  15.9  245    1-274    14-263 (275)
130 1opk_A P150, C-ABL, proto-onco 100.0 8.6E-47 2.9E-51  331.9  16.4  253    2-279   222-477 (495)
131 3qd2_B Eukaryotic translation  100.0 3.5E-46 1.2E-50  312.5  19.1  249    1-274     7-326 (332)
132 2jii_A Serine/threonine-protei 100.0 8.2E-47 2.8E-51  319.0  15.4  264    1-283    43-339 (352)
133 4agu_A Cyclin-dependent kinase 100.0 3.5E-46 1.2E-50  309.9  18.7  267    1-274     4-285 (311)
134 2yfx_A Tyrosine-protein kinase 100.0 1.1E-46 3.8E-51  315.1  15.7  258    1-281    31-305 (327)
135 3fdn_A Serine/threonine-protei 100.0 3.2E-46 1.1E-50  305.6  18.1  245    1-274    10-258 (279)
136 3hko_A Calcium/calmodulin-depe 100.0 2.7E-46 9.3E-51  315.0  18.0  253    2-274    28-331 (345)
137 3ttj_A Mitogen-activated prote 100.0 4.8E-46 1.6E-50  324.4  20.0  263    1-274    63-356 (464)
138 3bhy_A Death-associated protei 100.0 6.1E-46 2.1E-50  304.5  19.2  256    1-280     6-274 (283)
139 3kn6_A Ribosomal protein S6 ki 100.0 1.6E-46 5.3E-51  313.8  15.8  249    5-274    16-271 (325)
140 1xbb_A Tyrosine-protein kinase 100.0 3.1E-46   1E-50  307.5  17.3  256    2-282    18-281 (291)
141 1byg_A CSK, protein (C-termina 100.0 1.4E-46 4.8E-51  307.5  15.2  251    1-282    22-275 (278)
142 1fvr_A Tyrosine-protein kinase 100.0 2.7E-46 9.1E-51  312.8  17.1  256    1-282    26-302 (327)
143 2vd5_A DMPK protein; serine/th 100.0 1.6E-46 5.6E-51  321.9  16.1  253    1-274    62-328 (412)
144 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.1E-47 2.8E-51  328.8  14.4  253    2-280   186-440 (452)
145 3mwu_A Calmodulin-domain prote 100.0 2.3E-46 7.7E-51  329.1  17.0  248    2-274    24-277 (486)
146 4ejn_A RAC-alpha serine/threon 100.0 6.8E-47 2.3E-51  329.0  13.6  247    1-274   149-405 (446)
147 1t4h_A Serine/threonine-protei 100.0 1.1E-45 3.8E-50  304.0  20.1  246    2-274    28-283 (290)
148 1u5q_A Serine/threonine protei 100.0 3.6E-46 1.2E-50  314.1  17.3  245    2-275    56-307 (348)
149 4hgt_A Casein kinase I isoform 100.0 4.8E-46 1.6E-50  306.9  17.6  262    1-283    10-283 (296)
150 3dls_A PAS domain-containing s 100.0 1.2E-46 4.1E-51  315.7  14.1  239    2-274    26-275 (335)
151 3oz6_A Mitogen-activated prote 100.0 1.9E-46 6.5E-51  320.8  15.4  267    1-274    10-329 (388)
152 2jam_A Calcium/calmodulin-depe 100.0 3.9E-46 1.3E-50  308.7  16.8  249    1-274    10-262 (304)
153 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.5E-46 8.5E-51  313.2  15.6  266    1-274    35-319 (329)
154 3p1a_A MYT1 kinase, membrane-a 100.0 4.2E-46 1.4E-50  309.4  16.8  243    2-274    59-305 (311)
155 2j7t_A Serine/threonine-protei 100.0 1.3E-46 4.6E-51  311.2  13.7  250    1-273    20-275 (302)
156 3uzp_A CKI-delta, CKID, casein 100.0 5.7E-46 1.9E-50  306.5  17.3  262    1-283    10-283 (296)
157 3n9x_A Phosphotransferase; mal 100.0 4.7E-46 1.6E-50  322.3  17.5  269    1-274    27-362 (432)
158 3nyv_A Calmodulin-domain prote 100.0 1.4E-46 4.8E-51  330.4  14.3  248    2-274    28-282 (484)
159 3com_A Serine/threonine-protei 100.0   9E-46 3.1E-50  307.9  18.4  249    1-274    30-279 (314)
160 2v62_A Serine/threonine-protei 100.0 1.5E-46 5.3E-51  316.5  13.9  263    1-278    38-326 (345)
161 3q5i_A Protein kinase; CDPK, m 100.0 4.5E-46 1.5E-50  328.5  17.5  249    1-274    37-302 (504)
162 3is5_A Calcium-dependent prote 100.0 4.3E-46 1.5E-50  305.7  16.2  248    2-274    24-279 (285)
163 1u46_A ACK-1, activated CDC42  100.0 1.2E-46 4.3E-51  309.7  12.8  260    1-283    19-287 (291)
164 2pml_X PFPK7, Ser/Thr protein  100.0 9.2E-46 3.2E-50  312.1  18.3  263    1-274    32-323 (348)
165 2vgo_A Serine/threonine-protei 100.0 8.6E-46 2.9E-50  303.8  17.6  245    1-274    15-263 (284)
166 1ua2_A CAK, cell division prot 100.0   5E-46 1.7E-50  313.4  16.4  266    1-274    11-292 (346)
167 1b6c_B TGF-B superfamily recep 100.0   4E-45 1.4E-49  307.4  21.9  267    1-282    43-338 (342)
168 3lij_A Calcium/calmodulin depe 100.0 8.8E-46   3E-50  325.9  18.5  248    2-274    39-292 (494)
169 2acx_A G protein-coupled recep 100.0 7.2E-46 2.5E-50  327.6  17.8  249    1-274   185-445 (576)
170 3g33_A Cell division protein k 100.0 1.8E-45 6.1E-50  305.3  19.2  266    1-274    10-297 (308)
171 2r5t_A Serine/threonine-protei 100.0 2.6E-46 8.7E-51  317.3  14.3  242    1-269    39-285 (373)
172 2y7j_A Phosphorylase B kinase  100.0 6.7E-46 2.3E-50  314.6  16.8  249    2-274    96-360 (365)
173 3ll6_A Cyclin G-associated kin 100.0   1E-45 3.5E-50  310.3  17.7  254    2-282    30-310 (337)
174 2ac3_A MAP kinase-interacting  100.0 1.9E-46 6.3E-51  312.3  13.1  266    2-274    14-296 (316)
175 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-45 3.8E-50  313.6  17.9  249    2-281    67-340 (365)
176 3rp9_A Mitogen-activated prote 100.0 1.6E-45 5.5E-50  321.5  19.4  269    1-274    54-397 (458)
177 2qr7_A Ribosomal protein S6 ki 100.0 8.1E-47 2.8E-51  317.3  10.7  248    1-274    23-278 (342)
178 3i6u_A CDS1, serine/threonine- 100.0 1.3E-45 4.6E-50  318.1  18.3  250    1-274   136-400 (419)
179 2rku_A Serine/threonine-protei 100.0 1.2E-45   4E-50  304.5  17.0  247    1-274    16-266 (294)
180 1cm8_A Phosphorylated MAP kina 100.0 2.9E-45   1E-49  310.8  19.5  261    1-274    26-308 (367)
181 4aaa_A Cyclin-dependent kinase 100.0 5.8E-46   2E-50  311.3  15.0  266    1-274    26-307 (331)
182 2ozo_A Tyrosine-protein kinase 100.0 1.2E-45 4.1E-50  331.8  18.1  252    7-282   343-600 (613)
183 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-45 5.5E-50  324.5  18.3  251    1-273   186-448 (543)
184 1nxk_A MAP kinase-activated pr 100.0 3.2E-45 1.1E-49  313.8  19.7  246    2-274    63-322 (400)
185 2h6d_A 5'-AMP-activated protei 100.0 1.9E-45 6.4E-50  300.5  17.3  246    1-274    12-262 (276)
186 2owb_A Serine/threonine-protei 100.0 1.1E-45 3.8E-50  310.0  16.4  247    1-274    42-292 (335)
187 3fme_A Dual specificity mitoge 100.0 1.1E-45 3.6E-50  304.0  15.9  249    1-274     8-267 (290)
188 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-45 5.7E-50  304.8  17.2  247    2-275    24-272 (303)
189 2clq_A Mitogen-activated prote 100.0 2.9E-45 9.8E-50  302.1  18.4  249    3-274    25-279 (295)
190 3eqc_A Dual specificity mitoge 100.0 7.2E-46 2.5E-50  314.2  15.0  266    1-274    34-325 (360)
191 2a19_B Interferon-induced, dou 100.0   4E-46 1.4E-50  305.6  13.0  247    1-282    12-276 (284)
192 3llt_A Serine/threonine kinase 100.0   7E-45 2.4E-49  308.1  21.0  263    1-274    36-356 (360)
193 3nsz_A CK II alpha, casein kin 100.0 1.8E-45 6.2E-50  308.1  16.8  261    1-274    37-320 (330)
194 2xrw_A Mitogen-activated prote 100.0 5.5E-45 1.9E-49  309.8  19.9  260    1-274    26-319 (371)
195 3byv_A Rhoptry kinase; malaria 100.0 3.5E-46 1.2E-50  317.9  12.3  245    2-281    75-369 (377)
196 4fl3_A Tyrosine-protein kinase 100.0   2E-45   7E-50  331.2  17.7  253    6-283   375-634 (635)
197 3mi9_A Cell division protein k 100.0 3.1E-45 1.1E-49  309.3  17.7  269    1-274    18-312 (351)
198 2h8h_A Proto-oncogene tyrosine 100.0 4.2E-46 1.4E-50  330.3  12.9  253    2-280   269-523 (535)
199 1phk_A Phosphorylase kinase; g 100.0 4.6E-45 1.6E-49  301.4  18.3  249    1-273    18-283 (298)
200 1vzo_A Ribosomal protein S6 ki 100.0   7E-46 2.4E-50  313.5  13.6  253    1-275    55-323 (355)
201 3pg1_A Mitogen-activated prote 100.0 3.6E-45 1.2E-49  310.1  18.0  266    1-274    23-317 (362)
202 2w5a_A Serine/threonine-protei 100.0 3.9E-46 1.3E-50  305.0  11.2  251    1-276     7-270 (279)
203 3gxj_A TGF-beta receptor type- 100.0 9.4E-47 3.2E-51  312.1   7.5  266    1-281     4-298 (303)
204 3an0_A Dual specificity mitoge 100.0 3.4E-45 1.1E-49  307.8  16.5  249    1-274    52-311 (340)
205 2wtk_C Serine/threonine-protei 100.0 1.2E-44 4.2E-49  299.8  19.6  249    1-274     6-264 (305)
206 2r3i_A Cell division protein k 100.0 8.2E-45 2.8E-49  300.0  18.3  267    1-274     4-284 (299)
207 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-45 4.5E-50  313.7  13.8  257    2-280    64-361 (371)
208 3lm5_A Serine/threonine-protei 100.0 4.5E-45 1.5E-49  305.3  16.8  250    2-274    30-288 (327)
209 3pfq_A PKC-B, PKC-beta, protei 100.0 4.5E-45 1.5E-49  331.0  17.9  246    1-273   342-597 (674)
210 3qyz_A Mitogen-activated prote 100.0 7.2E-45 2.5E-49  308.4  17.8  267    1-274    28-314 (364)
211 2vwi_A Serine/threonine-protei 100.0 1.6E-45 5.4E-50  304.8  13.3  259    1-273    16-287 (303)
212 3cek_A Dual specificity protei 100.0 3.6E-45 1.2E-49  304.1  15.3  250    1-274    29-293 (313)
213 3sv0_A Casein kinase I-like; t 100.0 1.4E-44 4.7E-49  315.5  18.7  261    1-282     8-280 (483)
214 2fst_X Mitogen-activated prote 100.0 2.6E-45 8.8E-50  311.0  13.6  261    1-274    30-312 (367)
215 3eb0_A Putative uncharacterize 100.0 1.5E-44 5.1E-49  308.5  17.9  267    1-280     8-330 (383)
216 2j0j_A Focal adhesion kinase 1 100.0   1E-44 3.4E-49  327.8  17.8  255    2-281   392-652 (656)
217 2ycf_A Serine/threonine-protei 100.0   8E-45 2.7E-49  303.2  15.9  249    1-273    11-274 (322)
218 1x8b_A WEE1HU, WEE1-like prote 100.0 8.6E-45 2.9E-49  298.2  15.4  242    1-274    12-280 (289)
219 3rgf_A Cyclin-dependent kinase 100.0 7.6E-45 2.6E-49  312.5  15.7  264    5-274    26-334 (405)
220 1wak_A Serine/threonine-protei 100.0 9.6E-45 3.3E-49  311.0  15.9  264    1-274    38-392 (397)
221 2i6l_A Mitogen-activated prote 100.0 1.4E-44 4.9E-49  301.2  15.9  267    1-274    12-306 (320)
222 2wei_A Calmodulin-domain prote 100.0 1.1E-44 3.7E-49  297.7  14.9  249    1-274    23-277 (287)
223 1zy4_A Serine/threonine-protei 100.0 2.5E-44 8.4E-49  297.5  17.2  251    1-274     7-284 (303)
224 3kvw_A DYRK2, dual specificity 100.0 2.5E-44 8.6E-49  311.0  17.2  262    2-274    99-409 (429)
225 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.7E-45 1.6E-49  304.2  11.9  257    1-282    34-304 (319)
226 4exu_A Mitogen-activated prote 100.0   2E-44 6.9E-49  306.4  15.9  260    1-274    43-324 (371)
227 2x7f_A TRAF2 and NCK-interacti 100.0 2.5E-44 8.4E-49  300.7  15.8  249    1-274    25-287 (326)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 7.7E-44 2.6E-48  300.9  19.0  267    1-274    12-306 (353)
229 4e7w_A Glycogen synthase kinas 100.0 2.7E-44 9.2E-49  307.7  16.0  261    2-274    42-322 (394)
230 1blx_A Cyclin-dependent kinase 100.0 6.3E-44 2.1E-48  298.2  17.4  266    1-274    12-297 (326)
231 1z57_A Dual specificity protei 100.0 7.6E-44 2.6E-48  299.0  16.2  263    1-274    15-329 (339)
232 1j1b_A Glycogen synthase kinas 100.0 1.4E-43 4.9E-48  305.6  17.6  260    2-274    56-337 (420)
233 3aln_A Dual specificity mitoge 100.0 1.2E-43   4E-48  296.8  16.6  252    1-274    23-286 (327)
234 2dyl_A Dual specificity mitoge 100.0   8E-44 2.7E-48  296.6  14.9  250    1-274    26-284 (318)
235 3fhr_A MAP kinase-activated pr 100.0 1.2E-43   4E-48  297.8  15.6  250    1-274    29-288 (336)
236 3coi_A Mitogen-activated prote 100.0   1E-43 3.5E-48  300.2  15.3  261    1-274    25-306 (353)
237 1q8y_A SR protein kinase; tran 100.0 1.2E-43 4.2E-48  301.8  14.6  264    1-274    20-334 (373)
238 2eu9_A Dual specificity protei 100.0 2.7E-43 9.1E-48  297.6  15.7  263    1-274    20-334 (355)
239 3e3p_A Protein kinase, putativ 100.0 2.4E-43 8.1E-48  298.7  15.1  267    1-274    24-315 (360)
240 3p23_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48  306.0  14.1  247    2-273    26-283 (432)
241 2rio_A Serine/threonine-protei 100.0   4E-43 1.4E-47  304.0  16.4  248    3-273    18-295 (434)
242 2vx3_A Dual specificity tyrosi 100.0 7.8E-43 2.7E-47  297.8  17.5  198    1-206    55-262 (382)
243 3a99_A Proto-oncogene serine/t 100.0   4E-44 1.4E-48  298.7   8.6  239    1-274    44-294 (320)
244 3qa8_A MGC80376 protein; kinas 100.0 4.2E-43 1.4E-47  313.1  15.4  273    1-279    15-308 (676)
245 2iwi_A Serine/threonine-protei 100.0 7.4E-44 2.5E-48  296.1   9.6  239    1-274    32-284 (312)
246 3uqc_A Probable conserved tran 100.0 8.1E-42 2.8E-46  280.1  18.8  231    1-281    32-266 (286)
247 3m2w_A MAP kinase-activated pr 100.0   3E-41   1E-45  278.8  18.3  229    1-274    18-257 (299)
248 2pzi_A Probable serine/threoni 100.0 1.5E-41   5E-46  309.5  17.6  241    1-282    81-330 (681)
249 3dzo_A Rhoptry kinase domain;  100.0 6.1E-42 2.1E-46  294.7  12.6  244    2-280    80-372 (413)
250 2vuw_A Serine/threonine-protei 100.0 8.3E-41 2.8E-45  280.5   8.6  240    2-272    22-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.8E-33 6.1E-38  250.2   3.4  183    9-201   243-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 1.2E-28   4E-33  218.1   7.2  183    5-202   341-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 1.3E-25 4.5E-30  183.0   9.4  133    2-150    92-242 (282)
254 1zth_A RIO1 serine protein kin  99.8 7.7E-22 2.6E-26  158.9   6.5  138    2-151    49-220 (258)
255 4gyi_A RIO2 kinase; protein ki  99.8 1.1E-19 3.6E-24  152.3   7.7  138    2-151    97-266 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.5 1.5E-14 5.2E-19  116.5   8.7  141    1-148    15-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.4 5.8E-13   2E-17  107.0   9.3  128    9-148    29-213 (264)
258 3dxp_A Putative acyl-COA dehyd  99.2 3.1E-11   1E-15  101.6  10.3  142    5-150    43-249 (359)
259 3sg8_A APH(2'')-ID; antibiotic  99.1 4.4E-11 1.5E-15   98.3   4.4  187    5-203    25-288 (304)
260 3r70_A Aminoglycoside phosphot  98.9 5.9E-09   2E-13   86.2  10.8  134    4-150    41-238 (320)
261 4gkh_A Aminoglycoside 3'-phosp  98.8 4.5E-08 1.5E-12   78.8  11.8  133    8-148    32-222 (272)
262 3tdw_A Gentamicin resistance p  98.8 7.3E-08 2.5E-12   79.1  11.9  136    5-149    24-224 (306)
263 3d1u_A Putative fructosamine-3  98.8 5.6E-08 1.9E-12   79.0  10.4   75    5-83     20-97  (288)
264 3ovc_A Hygromycin-B 4-O-kinase  98.6 1.5E-07 5.1E-12   79.0  10.1   74    5-84     46-122 (362)
265 3ats_A Putative uncharacterize  98.6 6.5E-08 2.2E-12   81.1   7.5   79    6-84     26-121 (357)
266 2yle_A Protein spire homolog 1  98.5 1.4E-06 4.8E-11   66.4  10.7  141   81-277    33-198 (229)
267 2q83_A YTAA protein; 2635576,   98.3 3.8E-06 1.3E-10   69.8  10.3   31  118-148   221-251 (346)
268 2olc_A MTR kinase, methylthior  98.3 3.3E-06 1.1E-10   71.8   9.7   75    5-81     35-120 (397)
269 3jr1_A Putative fructosamine-3  98.1 3.5E-05 1.2E-09   63.0  12.3   75    5-83     41-118 (312)
270 3f7w_A Putative fructosamine-3  98.1 1.3E-05 4.5E-10   64.9   9.6   74    5-82     20-96  (288)
271 3dxq_A Choline/ethanolamine ki  98.0 1.8E-05   6E-10   64.6   7.7   71    5-83     23-95  (301)
272 3csv_A Aminoglycoside phosphot  97.8  0.0002 6.9E-09   59.1  11.7   33  118-150   182-218 (333)
273 2ppq_A HSK, HK, homoserine kin  97.8 3.3E-05 1.1E-09   63.5   6.8  139    6-148    28-216 (322)
274 2pyw_A Uncharacterized protein  97.8 0.00012 4.2E-09   62.6  10.0   33  118-151   231-263 (420)
275 3feg_A Choline/ethanolamine ki  97.8 7.2E-05 2.5E-09   62.9   7.8  140    5-149    55-254 (379)
276 2qg7_A Ethanolamine kinase PV0  97.7 9.1E-05 3.1E-09   63.9   8.4   74    5-83    113-188 (458)
277 1nw1_A Choline kinase (49.2 KD  97.7 7.4E-05 2.5E-09   64.1   7.3   71    6-82     79-158 (429)
278 1zyl_A Hypothetical protein YI  97.7 0.00063 2.1E-08   55.9  12.4  140    6-149    32-223 (328)
279 3c5i_A Choline kinase; choline  97.6 0.00014 4.7E-09   61.1   6.7   74    5-83     38-121 (369)
280 3i1a_A Spectinomycin phosphotr  97.5  0.0023 7.8E-08   53.0  13.1   32  118-149   205-236 (339)
281 3f2s_A CK, chetk-alpha, cholin  97.4  0.0006 2.1E-08   57.6   8.2  139    6-148    58-279 (401)
282 3mes_A Choline kinase; malaria  96.8  0.0048 1.6E-07   52.6   8.4   74    5-83     75-157 (424)
283 3g15_A CK, chetk-alpha, cholin  96.4  0.0029 9.8E-08   53.7   4.7   30  120-149   245-280 (401)
284 4ann_A ESSB; membrane protein,  92.7    0.51 1.7E-05   35.8   7.6  128   46-209    36-164 (215)
285 4ano_A ESSB; membrane protein,  88.5     1.8 6.3E-05   32.9   7.4  122   46-204    41-164 (219)
286 3cxl_A N-chimerin; SH2, RHO-GA  82.8    0.15 5.1E-06   44.0  -1.3   59    4-65    146-213 (463)
287 3eps_A Isocitrate dehydrogenas  80.3      28 0.00096   30.3  11.5  136    7-153   313-485 (578)
288 3pk1_B Apoptosis regulator BAX  46.7      17 0.00057   18.2   2.2   21  265-285     6-26  (34)
289 3oja_A Leucine-rich immune mol  40.4     2.6 8.8E-05   36.4  -2.3   30   40-69    323-352 (487)
290 4gqc_A Thiol peroxidase, perox  37.0      25 0.00084   25.0   2.9   26  258-283   138-163 (164)
291 1cja_A Protein (actin-fragmin   35.7 1.8E+02  0.0061   23.7   8.2   78   69-150   155-238 (342)
292 2x6h_A GH13170P, VPS34, phosph  33.6      26  0.0009   31.7   3.0   26  123-148   550-575 (696)
293 3bpy_A FORK head domain, forkh  33.1      22 0.00074   22.4   1.8   29  250-278    10-38  (85)
294 1kq8_A HFH-1, hepatocyte nucle  30.3      33  0.0011   22.3   2.3   29  250-278     7-35  (100)
295 3q5w_A Protein CUT8; proteasom  27.8      47  0.0016   25.5   3.1   37  248-284    65-110 (245)
296 1vtn_C HNF-3/FORK head DNA-rec  27.4      36  0.0012   22.2   2.1   29  250-278     8-36  (102)
297 2hdc_A Protein (transcription   27.1      38  0.0013   21.9   2.2   29  250-278     7-35  (97)
298 3l2c_A Forkhead box protein O4  26.0      38  0.0013   22.5   2.1   29  250-278    29-57  (110)
299 2fq3_A Transcription regulator  25.6      42  0.0014   22.0   2.2   32  244-275    46-77  (104)
300 2a07_F Forkhead box protein P2  24.7      37  0.0013   21.8   1.8   30  250-279     8-37  (93)
301 3coa_C Forkhead box protein O1  24.7      42  0.0014   22.5   2.1   29  250-278    16-44  (117)
302 2hfh_A Genesis, HFH-2; HNF-3 h  23.4      38  0.0013   22.4   1.7   28  250-277     8-35  (109)
303 2y3a_A Phosphatidylinositol-4,  22.5      52  0.0018   31.6   3.0   26  123-148   939-964 (1092)
304 1k4u_P Phagocyte NADPH oxidase  22.1      49  0.0017   16.3   1.5   15  264-278     9-23  (32)
305 3ls8_A Phosphatidylinositol 3-  21.6      60   0.002   28.9   3.0   25  124-148   477-501 (614)
306 1gzs_B SOPE; toxin/cell cycle,  20.8   2E+02  0.0068   19.8   4.7   36  250-285   126-163 (165)
307 1vry_A Glycine receptor alpha-  20.2      31  0.0011   21.1   0.7   19  178-196    30-48  (76)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.1e-60  Score=392.05  Aligned_cols=258  Identities=29%  Similarity=0.468  Sum_probs=215.8

Q ss_pred             CCCCCceecccCceEEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +|.+.+.||+|+||+||+|.+.      +++.||||+++..+....+.+.+|++++++++||||+++++++.+++.+++|
T Consensus        14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV   93 (299)
T 4asz_A           14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV   93 (299)
T ss_dssp             GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            3667899999999999999742      4788999999877777778899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCC------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEe
Q 039392           75 LEYMPHGSLEKYLHSSN------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS  142 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~  142 (285)
                      |||+++|+|.+++.+.+            ..+++..++.++.|++.||+|||   +++++||||||+|||+++++.+||+
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki~  170 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIG  170 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEEC
Confidence            99999999999996542            34899999999999999999999   9999999999999999999999999


Q ss_pred             eeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcC
Q 039392          143 DFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLP  221 (285)
Q Consensus       143 df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~  221 (285)
                      |||+++...............+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....+.. .......  
T Consensus       171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~-~~i~~~~--  247 (299)
T 4asz_A          171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI-ECITQGR--  247 (299)
T ss_dssp             CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHHTC--
T ss_pred             CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHcCC--
Confidence            9999987655443333344568999999999999999999999999999999998 89999775433221 1111100  


Q ss_pred             CCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          222 ISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                                       ....+..+++++.+|+.+||+.||++|||++++++.|+++.+.
T Consensus       248 -----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          248 -----------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             -----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence                             0111345678899999999999999999999999999998764


No 2  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=9.2e-60  Score=391.48  Aligned_cols=257  Identities=28%  Similarity=0.464  Sum_probs=207.9

Q ss_pred             CCCCceecccCceEEEEEEeC------CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLG------DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +.+.++||+|+||+||+|++.      +++.||||+++..+....+.|.+|++++++++||||+++++++.+.+.+++||
T Consensus        43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~  122 (329)
T 4aoj_A           43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF  122 (329)
T ss_dssp             EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            445688999999999999753      47889999998777777788999999999999999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCC--------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEE
Q 039392           76 EYMPHGSLEKYLHSSN--------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHL  141 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~--------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i  141 (285)
                      ||+++|+|.+++.+..              .++++..++.++.|++.||+|||   +++++||||||+|||++.++.+||
T Consensus       123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~Ki  199 (329)
T 4aoj_A          123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKI  199 (329)
T ss_dssp             ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEE
T ss_pred             EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcEEE
Confidence            9999999999986532              34889999999999999999999   999999999999999999999999


Q ss_pred             eeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhc
Q 039392          142 SDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWL  220 (285)
Q Consensus       142 ~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~  220 (285)
                      +|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+....+.. ......  
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~-~~i~~g--  276 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQG--  276 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH-HHHHHT--
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH-HHHHcC--
Confidence            99999987655433334445678999999999999999999999999999999999 89999765432221 111110  


Q ss_pred             CCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          221 PISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                                       .+...+..+++++.+++.+||+.||++|||++|++++|+.+.+.
T Consensus       277 -----------------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          277 -----------------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             -----------------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -----------------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence                             01112345778899999999999999999999999999998763


No 3  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.1e-59  Score=384.48  Aligned_cols=260  Identities=26%  Similarity=0.418  Sum_probs=207.5

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +++.+.||+|+||+||+|++.+  .||||+++..  +....+.+.+|++++++++||||+++++++.+ +.+++||||++
T Consensus        38 l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~  114 (307)
T 3omv_A           38 VMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCE  114 (307)
T ss_dssp             CCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCS
T ss_pred             eEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCC
Confidence            5678899999999999998643  5999998643  34556789999999999999999999998865 46889999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      +|+|.+++......+++..+..++.|++.||+|||   +++++||||||+|||+++++.+||+|||+++...........
T Consensus       115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~  191 (307)
T 3omv_A          115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV  191 (307)
T ss_dssp             SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence            99999999776667999999999999999999999   999999999999999999999999999999876544333334


Q ss_pred             ccccccccccCCcccCCC---ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          160 TQTLATIGYMAPEYGKEG---RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~---~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      ....||+.|+|||++.+.   .++.++|||||||++|||+||+.||.+..+.................            
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~------------  259 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL------------  259 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS------------
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc------------
Confidence            556799999999988643   58999999999999999999999997654433222222111111110            


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                         ...+..+++++.+++.+||+.||++|||++|+++.|+.|+.++
T Consensus       260 ---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          260 ---SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             ---TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             ---ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence               0113456788999999999999999999999999999988654


No 4  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=4.5e-60  Score=393.15  Aligned_cols=248  Identities=24%  Similarity=0.299  Sum_probs=210.3

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |++.++||+|+||+||+|.. .+|+.||||++........+.+.+|+++++.++||||+++++++...+.+|+|||||+|
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  155 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  155 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            77889999999999999975 47999999999876655556788999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      |+|.+++.+.  .+++..++.++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||++.......  ....
T Consensus       156 g~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~  228 (346)
T 4fih_A          156 GALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRK  228 (346)
T ss_dssp             EEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBC
T ss_pred             CcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cccc
Confidence            9999999764  3999999999999999999999   9999999999999999999999999999998775432  2234


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchh
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF  240 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+ ..........                 ..+
T Consensus       229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~-----------------~~~  290 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLP-----------------PRL  290 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSSC-----------------CCC
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCC-----------------CCC
Confidence            5679999999999999999999999999999999999999997643222 1111111110                 011


Q ss_pred             hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .....+++++.+||.+||..||++|||++|++++
T Consensus       291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1134567889999999999999999999999874


No 5  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=3.7e-60  Score=388.09  Aligned_cols=249  Identities=23%  Similarity=0.357  Sum_probs=210.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++++.||+|+||+||+|+. .+|+.||+|++....   ....+.+.+|+++++.++||||+++++++++.+.+|+|||
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE  112 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS  112 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            488999999999999999975 579999999997542   3345678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |++||+|.+++.+.+. +++..++.++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||++..+......
T Consensus       113 y~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          113 YAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             cCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence            9999999999977654 999999999999999999999   999999999999999999999999999999987654434


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+. ..........               
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~~~---------------  252 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI-FAKIIKLEYD---------------  252 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC---------------
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCCC---------------
Confidence            444567899999999999999999999999999999999999999976432221 1111111110               


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                           .+..+++++.+||.+||..||++|||++|++.+
T Consensus       253 -----~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~  285 (311)
T 4aw0_A          253 -----FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  285 (311)
T ss_dssp             -----CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred             -----CCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence                 122456779999999999999999999987543


No 6  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=8e-60  Score=392.23  Aligned_cols=249  Identities=20%  Similarity=0.339  Sum_probs=203.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++++.||+|+||+||+|+. .+|+.||||++....  ....+.+.+|++++++++||||+++++++.+.+.+|+||||
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy  104 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY  104 (350)
T ss_dssp             CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            478899999999999999975 579999999997542  34567789999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           78 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        78 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |+||+|.+++.... ..+++..++.++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||+++......  
T Consensus       105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--  179 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--  179 (350)
T ss_dssp             CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--
T ss_pred             CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--
Confidence            99999999996543 34789999999999999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....+.. ........+               
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~-~~i~~~~~~---------------  243 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV-LKIISGSFP---------------  243 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHTCCC---------------
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH-HHHHcCCCC---------------
Confidence            1223457999999999999999999999999999999999999999764332221 111111110               


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                          ..+..+++++.+||.+||+.||.+|||++|+|++
T Consensus       244 ----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          244 ----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                0123456779999999999999999999999874


No 7  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=5.5e-59  Score=385.52  Aligned_cols=254  Identities=24%  Similarity=0.306  Sum_probs=208.3

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |++.++||+|+||+||+|++ .+|+.||||+++....     ..+|+.+++.++||||+++++++.+++.+|+||||++|
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            45567899999999999985 4799999999975432     24699999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-cEEEeeeccceecCccccc---
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTREDIS---  156 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~-~~~i~df~~~~~~~~~~~~---  156 (285)
                      |+|.+++.+.+. +++..++.++.||+.||+|||   ++||+||||||+|||++.+| .+||+|||++.........   
T Consensus       135 g~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~  210 (336)
T 4g3f_A          135 GSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL  210 (336)
T ss_dssp             CBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---------
T ss_pred             CcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccce
Confidence            999999976654 999999999999999999999   99999999999999999887 6999999999877543221   


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+..... .....                
T Consensus       211 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i-~~~~~----------------  273 (336)
T 4g3f_A          211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKI-ASEPP----------------  273 (336)
T ss_dssp             ---CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHH-HHSCC----------------
T ss_pred             ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH-HcCCC----------------
Confidence            1223457999999999999999999999999999999999999999765443322211 11000                


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                       .....+..+++++.++|.+||+.||.+|||++|++++|...++..
T Consensus       274 -~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          274 -PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             -GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             -CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence             000123456788999999999999999999999999999887654


No 8  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=8.2e-59  Score=394.57  Aligned_cols=248  Identities=24%  Similarity=0.315  Sum_probs=210.0

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |++.+.||+|+||+||+|.. .+|+.||||++........+.+.+|+.+|+.++||||+++++++...+.+|+|||||+|
T Consensus       153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g  232 (423)
T 4fie_A          153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  232 (423)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence            77889999999999999975 47999999999876655567788999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      |+|.+++....  +++..+..++.||+.||+|||   ++||+||||||+|||++.+|.+||+|||++..+....  ....
T Consensus       233 G~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~  305 (423)
T 4fie_A          233 GALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRK  305 (423)
T ss_dssp             EEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CCBC
T ss_pred             CcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cccc
Confidence            99999997543  999999999999999999999   9999999999999999999999999999998775432  2234


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchh
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF  240 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+. ..........                 .+
T Consensus       306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-~~~i~~~~~~-----------------~~  367 (423)
T 4fie_A          306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-MKMIRDNLPP-----------------RL  367 (423)
T ss_dssp             CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCC-----------------CC
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCCC-----------------CC
Confidence            56799999999999999999999999999999999999999976432221 1111111100                 01


Q ss_pred             hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .....+++++.+||.+||..||.+|||++|+|++
T Consensus       368 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          368 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1123467789999999999999999999999874


No 9  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=5.9e-59  Score=383.24  Aligned_cols=254  Identities=25%  Similarity=0.445  Sum_probs=209.7

Q ss_pred             CCCCceecccCceEEEEEEe------CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            2 FSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +++.++||+|+||+||+|.+      .+++.||||.++... ....+.|.+|+.++++++||||+++++++..++.+++|
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            35678999999999999974      246889999986543 33457799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcE
Q 039392           75 LEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVA  139 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~  139 (285)
                      |||+++|+|.+++....               ..+++..++.++.||+.||+|||   +++++||||||+|||+++++.+
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~  184 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNV  184 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCE
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCE
Confidence            99999999999985431               24888999999999999999999   9999999999999999999999


Q ss_pred             EEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhh
Q 039392          140 HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVND  218 (285)
Q Consensus       140 ~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~  218 (285)
                      ||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |..||.+....+.. ......
T Consensus       185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~-~~i~~~  263 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV-EMIRNR  263 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH-HHHHTT
T ss_pred             EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcC
Confidence            9999999987655443334455678999999999999999999999999999999998 89999765432221 111100


Q ss_pred             hcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          219 WLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                                         ...+.+..++.++.+++.+||+.||.+|||++||++.|++.
T Consensus       264 -------------------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          264 -------------------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             -------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             -------------------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                               01112446788899999999999999999999999999864


No 10 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=4.5e-58  Score=373.94  Aligned_cols=245  Identities=25%  Similarity=0.387  Sum_probs=199.3

Q ss_pred             CCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceecc----CCceEEEE
Q 039392            3 SENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSN----EEFKALVL   75 (285)
Q Consensus         3 ~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~~v~   75 (285)
                      ++.++||+|+||+||+|.+ .++..||+|++....  ....+.+.+|++++++++||||+++++++..    ...+++||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4566899999999999975 468999999986543  3445778999999999999999999999854    45689999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeC-CCCcEEEeeeccceecCc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ--VIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~h~di~~~nili~-~~~~~~i~df~~~~~~~~  152 (285)
                      ||++||+|.+++.+... +++..++.++.||+.||+|||   +++  ++||||||+|||++ .+|.+||+|||+++....
T Consensus       109 Ey~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            99999999999976554 999999999999999999999   888  99999999999998 489999999999975433


Q ss_pred             ccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          153 EDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .    ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+..+.............+           
T Consensus       185 ~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~-----------  248 (290)
T 3fpq_A          185 S----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP-----------  248 (290)
T ss_dssp             T----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC-----------
T ss_pred             C----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC-----------
Confidence            2    2234679999999998865 69999999999999999999999997643332222221111100           


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                             ...+..+++++.+||.+||..||++|||++|++++
T Consensus       249 -------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          249 -------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             -------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                   01123456779999999999999999999999874


No 11 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=4.5e-58  Score=370.85  Aligned_cols=245  Identities=23%  Similarity=0.372  Sum_probs=192.6

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+|.. .+|+.||+|++....   ....+.+.+|+++++.++||||+++++++...+.+|+|||
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE   93 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence            589999999999999999975 579999999987542   3345678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |+ +|+|.+++.+.+. +++..++.++.||+.||+|||   ++|++||||||+||+++.+|.+||+|||+++......  
T Consensus        94 y~-~g~L~~~l~~~~~-l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--  166 (275)
T 3hyh_A           94 YA-GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--  166 (275)
T ss_dssp             CC-CEEHHHHHHHSCS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred             CC-CCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC--
Confidence            99 6699999876654 999999999999999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+..... ...........              
T Consensus       167 -~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-~~~~i~~~~~~--------------  230 (275)
T 3hyh_A          167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYT--------------  230 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC--------------
T ss_pred             -ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCC--------------
Confidence             2234679999999999988875 689999999999999999999997632221 11111111110              


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                            .+..+++++.+|+.+||+.||++|||++|++++
T Consensus       231 ------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          231 ------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             ------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             ------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                  123456779999999999999999999999874


No 12 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=4.6e-58  Score=375.64  Aligned_cols=247  Identities=24%  Similarity=0.311  Sum_probs=197.9

Q ss_pred             CCCCCceecccCceEEEEEEe----CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL----GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~----~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +|++++.||+|+||+||+|+.    .+++.||+|++....  ......+.+|++++++++||||+++++++.+++.+|+|
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            488999999999999999974    257889999987543  12234577899999999999999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      |||++||+|.+++.+... +++..++.++.||+.||+|||   ++|++||||||+|||++.+|.+||+|||+++......
T Consensus       105 mEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             ECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEcCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence            999999999999977654 999999999999999999999   9999999999999999999999999999998654332


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                        .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+. .........              
T Consensus       181 --~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~~~--------------  243 (304)
T 3ubd_A          181 --KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKAKL--------------  243 (304)
T ss_dssp             --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC--------------
T ss_pred             --ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH-HHHHHcCCC--------------
Confidence              222456799999999999999999999999999999999999999976433222 111111110              


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCH-----HHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINA-----KEIVTK  274 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~eil~~  274 (285)
                            ..+..+++++.+||++||+.||++|||+     +|++++
T Consensus       244 ------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          244 ------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             ------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence                  0123457789999999999999999984     677753


No 13 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=3.3e-56  Score=372.98  Aligned_cols=258  Identities=24%  Similarity=0.387  Sum_probs=212.2

Q ss_pred             CCCCceecccCceEEEEEEeC------CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCC-Cccccccceecc-CCceE
Q 039392            2 FSENNLIGRGGFGSVFKARLG------DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHH-RNIIKVISSCSN-EEFKA   72 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~-~~~~~   72 (285)
                      |++++.||+|+||+||+|.+.      +++.||+|.+.... ....+.+.+|++++.++.| |||+++++++.. ++.++
T Consensus        66 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~  145 (353)
T 4ase_A           66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM  145 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred             eEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEE
Confidence            567889999999999999742      24679999987544 3345678899999999965 899999999865 45689


Q ss_pred             EEEeccCCCCHHHhhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC
Q 039392           73 LVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM  137 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~  137 (285)
                      +|||||++|+|.+++....               ..+++..++.++.||+.||+|||   +++++||||||+|||+++++
T Consensus       146 iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~  222 (353)
T 4ase_A          146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKN  222 (353)
T ss_dssp             EEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCCCC
Confidence            9999999999999996532               23789999999999999999999   99999999999999999999


Q ss_pred             cEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhh
Q 039392          138 VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWV  216 (285)
Q Consensus       138 ~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~  216 (285)
                      .+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||+| |..||.+....+.......
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~  302 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  302 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence            999999999987755443444455678999999999999999999999999999999998 8999977544333222221


Q ss_pred             hhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          217 NDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      ...                   ++..+..+++++.+++.+||+.||.+|||+++++++|+++.+.
T Consensus       303 ~g~-------------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          303 EGT-------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             HTC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCC-------------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            111                   1112345677899999999999999999999999999998764


No 14 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.1e-55  Score=364.35  Aligned_cols=270  Identities=24%  Similarity=0.327  Sum_probs=198.9

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCC----ceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE----FKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e~   77 (285)
                      |.+.+.||+|+||+||+|++ +|+.||||++...... ......|+..+.+++||||+++++++..++    .+++||||
T Consensus         5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            56778999999999999987 5899999998754332 122334566667889999999999987653    57899999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCC--------CeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA--------QVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~--------~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      +++|+|.+++....  ++...+..++.|++.||+|||   ++        +++||||||+|||++.++.+||+|||+++.
T Consensus        83 ~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH---~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           83 HEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLH---MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             CTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH---HhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            99999999997654  889999999999999999999   55        999999999999999999999999999987


Q ss_pred             cCccccc--ceeccccccccccCCcccCCC------ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcC
Q 039392          150 LTREDIS--TIQTQTLATIGYMAPEYGKEG------RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLP  221 (285)
Q Consensus       150 ~~~~~~~--~~~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~  221 (285)
                      .......  .......||+.|+|||++.+.      .++.++|||||||++|||+||..||......+..........  
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~--  235 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD--  235 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS--
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc--
Confidence            6543221  122345799999999988754      478899999999999999999887754332222111110000  


Q ss_pred             CCccc----cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          222 ISTKE----IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       222 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      .....    .......+..+ .......++..+.+++.+||+.||++|||++|+++.|+++.++
T Consensus       236 ~~~~~~~~~~~~~~~rp~~p-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          236 PSVEEMRKVVCEQKLRPNIP-NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CCHHHHHHHHTTSCCCCCCC-GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             chHHHHHHHHhcccCCCCCC-ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            00000    00000000000 1111234667899999999999999999999999999998764


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=4.3e-55  Score=359.31  Aligned_cols=249  Identities=23%  Similarity=0.367  Sum_probs=189.0

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCC---------
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE---------   69 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---------   69 (285)
                      +|++++.||+|+||+||+|++ .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            478899999999999999975 479999999987544 344567889999999999999999999986543         


Q ss_pred             ---ceEEEEeccCCCCHHHhhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeee
Q 039392           70 ---FKALVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDF  144 (285)
Q Consensus        70 ---~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df  144 (285)
                         .+|+|||||++++|.+++.....  ..+...++.++.||+.||+|||   ++|++||||||+|||++.+|.+||+||
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~DF  162 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDF  162 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEccC
Confidence               37899999999999999976543  2456678899999999999999   999999999999999999999999999


Q ss_pred             ccceecCccccc----------ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhh
Q 039392          145 GIAKLLTREDIS----------TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH  214 (285)
Q Consensus       145 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~  214 (285)
                      |+++........          .......||+.|+|||++.+..++.++|||||||++|+|++   ||............
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~  239 (299)
T 4g31_A          163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTD  239 (299)
T ss_dssp             CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred             ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHH
Confidence            999876543211          11233569999999999999999999999999999999996   76542211111111


Q ss_pred             hhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ..    ...         .      .......++.+.+|+++||+.||++|||++|++++
T Consensus       240 ~~----~~~---------~------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          240 VR----NLK---------F------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HH----TTC---------C------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             Hh----cCC---------C------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            10    000         0      01123445667899999999999999999999873


No 16 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=2.3e-53  Score=357.85  Aligned_cols=264  Identities=19%  Similarity=0.266  Sum_probs=199.0

Q ss_pred             CCCCceecccCceEEEEEEe----CCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEe
Q 039392            2 FSENNLIGRGGFGSVFKARL----GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~----~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      |++.+.||+|+||+||+|+.    .+++.||+|.+.....  ...+.+|+++++.+ +||||+++++++...+.+|+|||
T Consensus        23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE  100 (361)
T 4f9c_A           23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP  100 (361)
T ss_dssp             CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred             EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence            88999999999999999964    3578899998865433  24577899999988 69999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-CcEEEeeeccceecCcccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~-~~~~i~df~~~~~~~~~~~  155 (285)
                      |+++++|.+++.    .+++..++.++.||+.||+|||   ++||+||||||+|||++.+ +.+||+|||+++.......
T Consensus       101 ~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A          101 YLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             CCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred             CCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence            999999999984    3889999999999999999999   9999999999999999876 8999999999986543221


Q ss_pred             c--------------------------ceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCcccccc
Q 039392          156 S--------------------------TIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNG  208 (285)
Q Consensus       156 ~--------------------------~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~  208 (285)
                      .                          .......||+.|+|||++.+. .++.++||||+||++|+|++|+.||....+.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~  253 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD  253 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence            1                          112234699999999988775 5899999999999999999999999654433


Q ss_pred             chhhhhhhhhhc----------------------CCCccccc------------cccccCcccchhhhhhHhHHHHHHhh
Q 039392          209 EMTLKHWVNDWL----------------------PISTKEIV------------DPNLLSREDIHFVAKEQCVSFVFNVA  254 (285)
Q Consensus       209 ~~~~~~~~~~~~----------------------~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~li  254 (285)
                      ............                      ........            .................+++++.+|+
T Consensus       254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl  333 (361)
T 4f9c_A          254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL  333 (361)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence            222222111000                      00000000            00000001111122345678899999


Q ss_pred             hcccccCcCCCCCHHHHHHH
Q 039392          255 MECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       255 ~~~l~~~p~~Rps~~eil~~  274 (285)
                      ++||..||++|||++|+|++
T Consensus       334 ~~lL~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          334 DKLLDLNPASRITAEEALLH  353 (361)
T ss_dssp             HHHTCSCTTTSCCHHHHHTS
T ss_pred             HHHCcCChhHCcCHHHHhcC
Confidence            99999999999999999864


No 17 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-53  Score=360.49  Aligned_cols=267  Identities=26%  Similarity=0.286  Sum_probs=203.1

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceecc------CCceE
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSN------EEFKA   72 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~   72 (285)
                      |++++.||+|+||+||+|.+ .+|+.||||++....  ....+.+.+|+++|+.++||||+++++++..      .+.+|
T Consensus        56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~  135 (398)
T 4b99_A           56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY  135 (398)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred             eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence            78889999999999999975 579999999986433  3344668899999999999999999998753      46789


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      +||||++ |+|.+++.+.. .+++..++.++.||+.||.|||   ++|++||||||+|||++.+|.+||+|||+++.+..
T Consensus       136 ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          136 VVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             EEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred             EEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence            9999996 57999987655 4999999999999999999999   99999999999999999999999999999987643


Q ss_pred             cc--ccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          153 ED--ISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       153 ~~--~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      ..  .........||+.|+|||++.+. .++.++||||+||++|+|++|..||.+....+ ............+......
T Consensus       211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~~~~  289 (398)
T 4b99_A          211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAVIQA  289 (398)
T ss_dssp             -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGGTC-
T ss_pred             CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHHhhh
Confidence            21  12223456899999999998775 57999999999999999999999997643322 2222222221111111000


Q ss_pred             c----------cccCcccchh-hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 P----------NLLSREDIHF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~----------~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .          ......+..+ .....+++++.+||.+||..||.+|||++|+|++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0          0000000111 0113457889999999999999999999999874


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=6.5e-53  Score=374.97  Aligned_cols=251  Identities=18%  Similarity=0.251  Sum_probs=211.3

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +|++++.||+|+||+||+|.. .+|+.||+|++........+.+.+|+++|+.++||||+++++++.....+++||||++
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~  237 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  237 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence            478899999999999999975 5799999999987666666778899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--CCcEEEeeeccceecCcccccc
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~--~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      ||+|.+++......+++..+..++.||+.||.|||   ++|++||||||+||+++.  .+.+||+|||++..+....   
T Consensus       238 gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~---  311 (573)
T 3uto_A          238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---  311 (573)
T ss_dssp             CCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS---
T ss_pred             CCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC---
Confidence            99999998766666999999999999999999999   999999999999999985  4899999999999876532   


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+. ...........               
T Consensus       312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~i~~~~~~~---------------  375 (573)
T 3uto_A          312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNM---------------  375 (573)
T ss_dssp             EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCC---------------
T ss_pred             ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHhCCCCC---------------
Confidence            22345799999999999999999999999999999999999999976433222 11111111100               


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                       .......+++++.+||++||+.||.+|||++|+|++
T Consensus       376 -~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          376 -DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             -CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             011133567789999999999999999999999874


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=7e-52  Score=367.33  Aligned_cols=248  Identities=21%  Similarity=0.278  Sum_probs=200.8

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHH---HHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFK---SFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~---~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|++++.||+|+||+||+|+. .+|+.||+|++....   .....   ....++.+++.++||||++++++|++.+.+|+
T Consensus       190 df~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lyl  269 (689)
T 3v5w_A          190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF  269 (689)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred             HeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEE
Confidence            488999999999999999975 479999999996432   11112   22345677888899999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      ||||++||+|.+++.+.+. +++..++.++.||+.||.|||   ++||+||||||+|||++.+|.+||+|||++......
T Consensus       270 VmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          270 ILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            9999999999999977654 999999999999999999999   999999999999999999999999999999876543


Q ss_pred             cccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .    ....+||+.|+|||++.. ..++.++|+|||||++|+|++|..||.+....... .........           
T Consensus       346 ~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i~~~-----------  409 (689)
T 3v5w_A          346 K----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTM-----------  409 (689)
T ss_dssp             C----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHHHHC-----------
T ss_pred             C----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcCC-----------
Confidence            2    234679999999999864 57999999999999999999999999764332221 100000000           


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCC-----HHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVTK  274 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps-----~~eil~~  274 (285)
                            ....+..+++++.+||.+||..||.+|++     ++|++++
T Consensus       410 ------~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          410 ------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             ------CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             ------CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence                  00112346778999999999999999998     6887654


No 20 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=1.2e-49  Score=332.21  Aligned_cols=271  Identities=33%  Similarity=0.529  Sum_probs=221.5

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +|++.+.||+|+||+||+|...+++.||+|.+........+.+.+|+++++.++||||+++++++...+..++|||++++
T Consensus        40 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  119 (321)
T 2qkw_B           40 NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMEN  119 (321)
T ss_dssp             CCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTT
T ss_pred             ccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCC
Confidence            58899999999999999999888999999998877666678889999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCC---CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           81 GSLEKYLHSSN---YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        81 ~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      ++|.+++....   ..++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++..........
T Consensus       120 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  196 (321)
T 2qkw_B          120 GNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH  196 (321)
T ss_dssp             CBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCC
T ss_pred             CcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence            99999986543   24889999999999999999999   9999999999999999999999999999998755433233


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccch-hhhhhhhh-hcCCCccccccccccCc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEM-TLKHWVND-WLPISTKEIVDPNLLSR  235 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~  235 (285)
                      ......+++.|+|||.+.+..++.++||||||+++|+|++|..||......+. ....+... ..........++..   
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  273 (321)
T 2qkw_B          197 LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL---  273 (321)
T ss_dssp             CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSC---
T ss_pred             cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhh---
Confidence            33445578999999999888999999999999999999999999976543322 11111111 11111111122111   


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                         .......++..+.+++.+||..||++|||+++++++|+.+++
T Consensus       274 ---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          274 ---ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             ---TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence               111245678889999999999999999999999999999875


No 21 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=3e-50  Score=334.37  Aligned_cols=261  Identities=25%  Similarity=0.389  Sum_probs=216.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +|++++.||+|+||+||+|.. .+++.||+|.+........+.+.+|+++++.++||||+++++++...+..++|||+++
T Consensus        11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   90 (310)
T 3s95_A           11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK   90 (310)
T ss_dssp             GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence            477889999999999999975 4689999999876666777889999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc--
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST--  157 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~--  157 (285)
                      +++|.+++......++...++.++.|++.||+|||   ++|++|+||||+||+++.++.++|+|||++..........  
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  167 (310)
T 3s95_A           91 GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG  167 (310)
T ss_dssp             TCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence            99999999886667999999999999999999999   9999999999999999999999999999998765432211  


Q ss_pred             ----------eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccc
Q 039392          158 ----------IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI  227 (285)
Q Consensus       158 ----------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                ......+|+.|+|||.+.+..++.++||||||+++|+|++|..|+.............            
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~------------  235 (310)
T 3s95_A          168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN------------  235 (310)
T ss_dssp             ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC------------
T ss_pred             cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh------------
Confidence                      0114568999999999999999999999999999999999999986533221111000            


Q ss_pred             ccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          228 VDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                            .........+..+++++.+++.+||..||.+|||++++++.|++++..+
T Consensus       236 ------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          236 ------VRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             ------HHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ------hhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence                  0000111113455677999999999999999999999999999998765


No 22 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=5.1e-50  Score=330.88  Aligned_cols=249  Identities=27%  Similarity=0.326  Sum_probs=209.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      .|++.+.||+|+||+||+|.. .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++|||+++
T Consensus        21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  100 (297)
T 3fxz_A           21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (297)
T ss_dssp             TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence            489999999999999999974 5799999999987666566778899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      +++|.+++....  ++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++........  ..
T Consensus       101 ~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~  173 (297)
T 3fxz_A          101 GGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KR  173 (297)
T ss_dssp             TCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--CB
T ss_pred             CCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--cc
Confidence            999999997653  899999999999999999999   99999999999999999999999999999987654322  22


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ....+++.|+|||.+.+..++.++||||||+++|+|++|..||..................                  .
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~------------------~  235 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP------------------E  235 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC------------------C
T ss_pred             CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC------------------C
Confidence            3457899999999999999999999999999999999999999764332221111111000                  0


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      +..+..++..+.+++.+||..||.+|||++|++++
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            11134567779999999999999999999999863


No 23 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=3.1e-49  Score=335.58  Aligned_cols=260  Identities=28%  Similarity=0.433  Sum_probs=213.0

Q ss_pred             CCCCCceecccCceEEEEEEe--------CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccC-CCCccccccceeccCCc
Q 039392            1 GFSENNLIGRGGFGSVFKARL--------GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEF   70 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~--------~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   70 (285)
                      +|++++.||+|+||.||+|..        .++..||+|++.... ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus        82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~  161 (370)
T 2psq_A           82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP  161 (370)
T ss_dssp             GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred             HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence            367789999999999999974        235679999987543 34457788999999999 89999999999999999


Q ss_pred             eEEEEeccCCCCHHHhhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC
Q 039392           71 KALVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD  135 (285)
Q Consensus        71 ~~~v~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~  135 (285)
                      +++||||+++++|.+++....               ..++...++.++.||+.||.|||   ++|++||||||+||+++.
T Consensus       162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~  238 (370)
T 2psq_A          162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTE  238 (370)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECT
T ss_pred             EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEECC
Confidence            999999999999999987643               23788999999999999999999   999999999999999999


Q ss_pred             CCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhh
Q 039392          136 NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKH  214 (285)
Q Consensus       136 ~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~  214 (285)
                      ++.+||+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+....+.. ..
T Consensus       239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~-~~  317 (370)
T 2psq_A          239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF-KL  317 (370)
T ss_dssp             TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HH
T ss_pred             CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HH
Confidence            99999999999987665433233334556788999999999999999999999999999999 99998764322211 11


Q ss_pred             hhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                      .....                   ....+..++.++.+++.+||..||.+|||++++++.|+++.....
T Consensus       318 ~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          318 LKEGH-------------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             HHTTC-------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HhcCC-------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            11000                   001123466779999999999999999999999999999987543


No 24 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2.4e-49  Score=330.87  Aligned_cols=257  Identities=26%  Similarity=0.416  Sum_probs=210.2

Q ss_pred             CCCCceecccCceEEEEEEeC----CCcEEEEEEeecc-chhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            2 FSENNLIGRGGFGSVFKARLG----DGMEVAVKVFNLQ-YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      |++.+.||+|+||+||+|...    .+..||+|++... .....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  130 (325)
T 3kul_A           51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE  130 (325)
T ss_dssp             EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEE
T ss_pred             eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEee
Confidence            677899999999999999753    3456999998754 34455678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++......++...++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++.........
T Consensus       131 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred             CCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence            99999999999776666999999999999999999999   999999999999999999999999999999877553222


Q ss_pred             -ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          157 -TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       157 -~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                       .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+.... .... .              
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~-~~~~-~--------------  271 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEG-Y--------------  271 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHH-HHTT-C--------------
T ss_pred             eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHH-HHcC-C--------------
Confidence             12223445778999999988899999999999999999999 9999976433222111 1110 0              


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                          ....+..++.++.+++.+||..||.+|||++++++.|+++.++
T Consensus       272 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          272 ----RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             ----CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence                0111235667799999999999999999999999999999864


No 25 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=2.5e-49  Score=330.43  Aligned_cols=272  Identities=24%  Similarity=0.313  Sum_probs=209.4

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCC----ceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE----FKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+|... ++.||+|++..... ......+|+.+++.++||||+++++++....    .+++|||
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e  102 (322)
T 3soc_A           25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA  102 (322)
T ss_dssp             EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             hchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence            4788999999999999999875 79999999875433 3344556888999999999999999987644    4689999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCC----------CeeecCCCCCCeeeCCCCcEEEeeecc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA----------QVIHCDLKPSNVLLDDNMVAHLSDFGI  146 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~----------~~~h~di~~~nili~~~~~~~i~df~~  146 (285)
                      ++++++|.+++....  ++...++.++.|++.||.|||   +.          |++|+||||+||+++.++.+||+|||+
T Consensus       103 ~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~  177 (322)
T 3soc_A          103 FHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL  177 (322)
T ss_dssp             CCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             cCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence            999999999997644  899999999999999999999   88          999999999999999999999999999


Q ss_pred             ceecCcccccceeccccccccccCCcccCC-----CccCcchhhHHHHHHHHHHhhCCCCCccccccchh-hhhhhhhhc
Q 039392          147 AKLLTREDISTIQTQTLATIGYMAPEYGKE-----GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT-LKHWVNDWL  220 (285)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~  220 (285)
                      +................+++.|+|||.+.+     ..++.++||||||+++|+|++|..||......... .......  
T Consensus       178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~--  255 (322)
T 3soc_A          178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ--  255 (322)
T ss_dssp             CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS--
T ss_pred             ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc--
Confidence            987765443333344678999999998876     35678899999999999999999999764332111 1100000  


Q ss_pred             CCCcccc---ccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          221 PISTKEI---VDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       221 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      .......   ..................++.++.+++.+||..||++|||++++++.|+++++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            0000000   000000011111122345677899999999999999999999999999999875


No 26 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.5e-49  Score=329.84  Aligned_cols=257  Identities=28%  Similarity=0.412  Sum_probs=203.3

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|.. +++.||+|++....  ....+.+.+|++++++++||||+++++++......++|||++
T Consensus        38 ~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  116 (309)
T 3p86_A           38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYL  116 (309)
T ss_dssp             GEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECC
T ss_pred             HceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecC
Confidence            477889999999999999987 58899999986543  344567889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           79 PHGSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        79 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      ++++|.+++.....  .++...++.++.|++.||+|||   ++|  ++|+||||+||+++.++.++|+|||++.......
T Consensus       117 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~  193 (309)
T 3p86_A          117 SRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF  193 (309)
T ss_dssp             TTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred             CCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence            99999999976542  3889999999999999999999   999  9999999999999999999999999997554321


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                        .......+++.|+|||.+.+..++.++||||||+++|+|++|..||......+...... ....              
T Consensus       194 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~-~~~~--------------  256 (309)
T 3p86_A          194 --LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-FKCK--------------  256 (309)
T ss_dssp             ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH-HSCC--------------
T ss_pred             --cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcCC--------------
Confidence              12234568999999999999999999999999999999999999997643322211110 0000              


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                          ....+..+++++.+++.+||..||.+|||++++++.|+.+.++.
T Consensus       257 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          257 ----RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             ----CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence                00112345677999999999999999999999999999987653


No 27 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.6e-49  Score=323.46  Aligned_cols=257  Identities=27%  Similarity=0.426  Sum_probs=213.4

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++......++|||++++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (269)
T 4hcu_A           11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   89 (269)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             hceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence            4778899999999999999988889999999875432 235688999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      ++|.+++......++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++....... .....
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~  165 (269)
T 4hcu_A           90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSST  165 (269)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTT
T ss_pred             CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccccc
Confidence            9999999777667999999999999999999999   9999999999999999999999999999998665432 12223


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...+++.|+|||.+.+..++.++|+||||+++++|++ |..||......+.. ........                   
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~-~~~~~~~~-------------------  225 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFR-------------------  225 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HHHHTTCC-------------------
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHH-HHHhcCcc-------------------
Confidence            4456778999999988899999999999999999999 99998764332211 11111000                   


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ...+...+.++.+++.+||..||.+|||+++++++|+++.++-
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~g  268 (269)
T 4hcu_A          226 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG  268 (269)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHcc
Confidence            0012234667999999999999999999999999999998753


No 28 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=9.7e-50  Score=339.71  Aligned_cols=257  Identities=30%  Similarity=0.451  Sum_probs=212.3

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      |++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||+++
T Consensus       116 ~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~  195 (377)
T 3cbl_A          116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ  195 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence            567889999999999999865 78999999987543 3344678899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      +++|.+++......++...++.++.|++.||+|||   ++|++||||+|+||+++.++.+||+|||++............
T Consensus       196 ~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~  272 (377)
T 3cbl_A          196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG  272 (377)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence            99999999876666899999999999999999999   999999999999999999999999999999865443222211


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccc
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI  238 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                      ....++..|+|||.+.+..++.++||||||+++|+|++ |..||......+..  .......                  
T Consensus       273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~--~~~~~~~------------------  332 (377)
T 3cbl_A          273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR--EFVEKGG------------------  332 (377)
T ss_dssp             SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH--HHHHTTC------------------
T ss_pred             CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH--HHHHcCC------------------
Confidence            22335677999999988899999999999999999998 99998764332211  1111000                  


Q ss_pred             hhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      ....+..++.++.+++.+||..||.+|||++++++.|+++++.
T Consensus       333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            0111334677899999999999999999999999999999865


No 29 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.6e-49  Score=323.37  Aligned_cols=256  Identities=27%  Similarity=0.406  Sum_probs=212.8

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +|++.+.||+|+||.||++...++..||+|++..... ..+.+.+|+++++.++||||+++++++......++|||++++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (268)
T 3sxs_A            9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN   87 (268)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             heeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence            4778899999999999999988888999999875432 336688999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      ++|.+++......++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++........ ....
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~  163 (268)
T 3sxs_A           88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSV  163 (268)
T ss_dssp             CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EECC
T ss_pred             CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hccc
Confidence            9999999876666999999999999999999999   99999999999999999999999999999987655432 2223


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...+++.|+|||.+.+..++.++||||||+++++|++ |..||............. ....                   
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~-------------------  223 (268)
T 3sxs_A          164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHR-------------------  223 (268)
T ss_dssp             SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCC-------------------
T ss_pred             CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH-cCCC-------------------
Confidence            4456778999999988899999999999999999999 999987643332221110 0000                   


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      ...+...++++.+++.+||..||.+|||++++++.|+.++++
T Consensus       224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          224 LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            000223456799999999999999999999999999988654


No 30 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=2e-49  Score=331.26  Aligned_cols=246  Identities=24%  Similarity=0.328  Sum_probs=205.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||+|.. .+|+.||+|++....  ....+.+.+|+++++.++||||+++++++...+..++|||+
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~   95 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY   95 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence            588999999999999999985 579999999987542  34556788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +++++|.+++..... +++..++.++.|++.||.|||   ++|++||||||+||+++.++.++|+|||++.......   
T Consensus        96 ~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---  168 (328)
T 3fe3_A           96 ASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---  168 (328)
T ss_dssp             CTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---
T ss_pred             CCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---
Confidence            999999999876554 899999999999999999999   9999999999999999999999999999997665432   


Q ss_pred             eeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      ......+++.|+|||.+.+..+ +.++||||||+++|+|++|..||.+....+.. .........               
T Consensus       169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~~---------------  232 (328)
T 3fe3_A          169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR-ERVLRGKYR---------------  232 (328)
T ss_dssp             GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHCCCC---------------
T ss_pred             ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCC---------------
Confidence            2245678999999999988776 48999999999999999999999764322211 111111000               


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                           .+..+++++.+++++||..||.+|||+++++++
T Consensus       233 -----~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          233 -----IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             -----CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             -----CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                 122346678999999999999999999999864


No 31 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.2e-49  Score=328.44  Aligned_cols=273  Identities=26%  Similarity=0.428  Sum_probs=210.7

Q ss_pred             CCCCCceecccCceEEEEEEe-----CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceecc--CCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-----GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN--EEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~   73 (285)
                      .|++.+.||+|+||+||+++.     .+++.||+|++........+.+.+|+++++.++||||+++++++..  ....++
T Consensus        11 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   90 (295)
T 3ugc_A           11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL   90 (295)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEE
T ss_pred             HhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEE
Confidence            377889999999999999973     3688999999987777777889999999999999999999998854  456899


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |||++++++|.+++......++...++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++......
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A           91 IMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             EEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred             EEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence            99999999999999877666999999999999999999999   999999999999999999999999999999876543


Q ss_pred             ccc-ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc--c
Q 039392          154 DIS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD--P  230 (285)
Q Consensus       154 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  230 (285)
                      ... .......++..|+|||.+.+..++.++||||||+++++|++|..|+........   ...   ..........  .
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~  241 (295)
T 3ugc_A          168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMI---GNDKQGQMIVFHL  241 (295)
T ss_dssp             --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH---HHH---CTTCCTHHHHHHH
T ss_pred             cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH---hhh---cCccccchhHHHH
Confidence            221 222334567779999999988999999999999999999999999865321100   000   0000000000  0


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ............+..+++++.+++.+||..||.+|||++++++.|+++++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            0000000111224466788999999999999999999999999999999875


No 32 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=2.3e-48  Score=325.18  Aligned_cols=267  Identities=36%  Similarity=0.568  Sum_probs=213.1

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchh-HHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGR-VFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +|++.+.||+|+||+||+|...+++.||+|++...... ....+.+|+++++.++||||+++++++...+..++|||+++
T Consensus        31 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  110 (326)
T 3uim_A           31 NFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMA  110 (326)
T ss_dssp             SSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCT
T ss_pred             ccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEecc
Confidence            58999999999999999998878999999998754322 22357889999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCC---CccCHHHHHHHHHHHHHHHHHHhcCCCC---CeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           80 HGSLEKYLHSSN---YILDIYQRLNIMIDVASTLEYLHFGYSA---QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        80 ~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~~~---~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      +++|.+++....   ..++...++.++.|++.||.|||   +.   |++|+||||+||+++.++.++|+|||++......
T Consensus       111 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  187 (326)
T 3uim_A          111 NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK  187 (326)
T ss_dssp             TCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred             CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence            999999987643   24889999999999999999999   77   9999999999999999999999999999876543


Q ss_pred             cccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccc---cchhhhhhhhhhcC-CCcccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFN---GEMTLKHWVNDWLP-ISTKEIVD  229 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~  229 (285)
                      . ........+++.|+|||.+.+..++.++||||||+++|+|++|..||+....   .......+...... .......+
T Consensus       188 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (326)
T 3uim_A          188 D-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD  266 (326)
T ss_dssp             S-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSC
T ss_pred             c-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcC
Confidence            2 2223445689999999999888899999999999999999999999964221   11122222222111 11111111


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVK  277 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~  277 (285)
                      ...      ........+..+.+++.+||+.||.+|||+++++++|+.
T Consensus       267 ~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          267 VDL------QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TTC------TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             hhh------ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            111      112245677889999999999999999999999999974


No 33 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=4.5e-49  Score=328.88  Aligned_cols=252  Identities=23%  Similarity=0.336  Sum_probs=206.3

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccch-hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..++|||++
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   87 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   87 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence            5889999999999999999754 789999999865432 23356789999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      ++++|.+++..... +++..++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++...........
T Consensus        88 ~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  163 (323)
T 3tki_A           88 SGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (323)
T ss_dssp             TTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             CCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence            99999999876544 999999999999999999999   99999999999999999999999999999987654333333


Q ss_pred             eccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          159 QTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      .....+++.|+|||.+.+..+ +.++||||||+++|+|++|..||............+......                
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~----------------  227 (323)
T 3tki_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----------------  227 (323)
T ss_dssp             BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT----------------
T ss_pred             cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc----------------
Confidence            345678999999999887765 889999999999999999999997654433333322211110                


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        ......++.++.+|+.+||..||.+|||++|++++
T Consensus       228 --~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          228 --LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             --STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             --CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence              01123456778999999999999999999999864


No 34 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=7.6e-49  Score=321.76  Aligned_cols=256  Identities=23%  Similarity=0.402  Sum_probs=209.9

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +|++.+.||+|+||.||++...++..||+|++..... ..+.+.+|+++++.++||||+++++++...+..++|||++++
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  103 (283)
T 3gen_A           25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN  103 (283)
T ss_dssp             GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred             HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence            3677899999999999999988888999999875432 235688999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      ++|.+++......++...++.++.|++.||.+||   ++|++|+||||+||+++.++.++|+|||++....... .....
T Consensus       104 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~  179 (283)
T 3gen_A          104 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSV  179 (283)
T ss_dssp             CBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHSTT
T ss_pred             CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccccc
Confidence            9999999875566999999999999999999999   9999999999999999999999999999998665432 11223


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...+++.|+|||.+.+..++.++||||||+++|+|++ |..||........... ......                   
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~~~~-------------------  239 (283)
T 3gen_A          180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLR-------------------  239 (283)
T ss_dssp             STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHTTCC-------------------
T ss_pred             CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH-HhcccC-------------------
Confidence            3456778999999988889999999999999999998 9999976443222111 111000                   


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      ...+...++.+.+++.+||..||.+|||+++++++|+++.++
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            001223456789999999999999999999999999999865


No 35 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=3.2e-48  Score=321.56  Aligned_cols=261  Identities=26%  Similarity=0.420  Sum_probs=206.2

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      .|++.+.||+|+||+||+|...  ..+++|+++..  .....+.+.+|++++++++||||+++++++.. +..++|||++
T Consensus        37 ~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~  113 (307)
T 3lb7_A           37 EVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWC  113 (307)
T ss_dssp             SCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             ceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEecC
Confidence            4788999999999999999864  35888887643  34455778899999999999999999998764 4578999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      .+++|.+++......++...++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++...........
T Consensus       114 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~  190 (307)
T 3lb7_A          114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ  190 (307)
T ss_dssp             SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred             CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence            999999999766667999999999999999999999   99999999999999999999999999999986554332333


Q ss_pred             eccccccccccCCcccC---CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          159 QTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~---~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                      .....+++.|+|||.+.   +..++.++||||||+++|+|++|..||......+................          
T Consensus       191 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~----------  260 (307)
T 3lb7_A          191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS----------  260 (307)
T ss_dssp             ---CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCST----------
T ss_pred             ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchh----------
Confidence            34557899999999875   55689999999999999999999999976544333222222111111110          


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                           .....+++++.+++.+||..+|.+|||++++++.|+.++..+
T Consensus       261 -----~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~  302 (307)
T 3lb7_A          261 -----KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             -----TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             -----hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence                 012345677999999999999999999999999999988654


No 36 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.2e-48  Score=330.35  Aligned_cols=250  Identities=22%  Similarity=0.307  Sum_probs=206.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchh------HHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGR------VFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      .|++++.||+|+||.||++... +|+.||+|++......      ..+.+.+|+.+++.++||||+++++++......++
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   92 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL   92 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence            4788999999999999999754 6899999998754321      34678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----cEEEeeecccee
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKL  149 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~----~~~i~df~~~~~  149 (285)
                      |||++++++|.+++.... .+++..++.++.||+.||.|||   +.|++|+||||+||+++.++    .++|+|||++..
T Consensus        93 v~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           93 ILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             EEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             EEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            999999999999997654 4999999999999999999999   99999999999999998776    799999999987


Q ss_pred             cCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          150 LTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .....   ......+|+.|+|||++.+..++.++||||||+++|+|++|..||.+....+. .........         
T Consensus       169 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~i~~~~~---------  235 (361)
T 2yab_A          169 IEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANITAVSY---------  235 (361)
T ss_dssp             CCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCC---------
T ss_pred             cCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCC---------
Confidence            65432   22345689999999999998999999999999999999999999976332211 111111100         


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                             .........++.++.+||.+||..||.+|||+++++++
T Consensus       236 -------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          236 -------DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             -------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             -------CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                   01111234567789999999999999999999999863


No 37 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9e-49  Score=326.69  Aligned_cols=250  Identities=19%  Similarity=0.281  Sum_probs=208.0

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +|++.+.||+|+||+||++... +++.+|+|++.... .....+.+|+++++.++||||+++++++...+..++|||+++
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   84 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence            4788999999999999999754 68899999987543 344668899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--CCcEEEeeeccceecCcccccc
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~--~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +++|.+++......+++..++.++.|++.||.|||   ++|++|+||||+||+++.  ++.++|+|||++.......   
T Consensus        85 g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~---  158 (321)
T 1tki_A           85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---  158 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---
Confidence            99999999776656999999999999999999999   999999999999999986  7899999999998775432   


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      ......+++.|+|||.+.+..++.++||||||+++|+|++|..||......+. ..........                
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~----------------  221 (321)
T 1tki_A          159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-IENIMNAEYT----------------  221 (321)
T ss_dssp             EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCC----------------
T ss_pred             ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH-HHHHHcCCCC----------------
Confidence            22345688999999999988899999999999999999999999976432221 1111111110                


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ........++.++.+++.+||..||.+|||++|++++
T Consensus       222 ~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0111133567789999999999999999999999985


No 38 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.5e-49  Score=330.50  Aligned_cols=248  Identities=24%  Similarity=0.338  Sum_probs=196.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||++
T Consensus        11 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~   90 (347)
T 3zgw_A           11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYC   90 (347)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence            478899999999999999975 579999999987543 233456889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      ++++|.+++..... +++..++.++.||+.||.|||   +.|++||||||+||+++.++.+||+|||++....... ...
T Consensus        91 ~gg~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-~~~  165 (347)
T 3zgw_A           91 PGGELFDYIISQDR-LSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYH  165 (347)
T ss_dssp             TTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred             CCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-Ccc
Confidence            99999999876554 999999999999999999999   9999999999999999999999999999987654322 122


Q ss_pred             eccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          159 QTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      .....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||........ ..........                
T Consensus       166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~----------------  228 (347)
T 3zgw_A          166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL-YKKIMRGKYD----------------  228 (347)
T ss_dssp             ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC----------------
T ss_pred             ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCCC----------------
Confidence            234568999999999988775 8999999999999999999999976332211 1111111000                


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                          .+..+++++.+++.+||..||.+|||++|++++
T Consensus       229 ----~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h  261 (347)
T 3zgw_A          229 ----VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH  261 (347)
T ss_dssp             ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ----CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence                122346678899999999999999999999975


No 39 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=4.1e-48  Score=321.52  Aligned_cols=267  Identities=22%  Similarity=0.299  Sum_probs=206.4

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|...+++.||+|++....  ......+.+|+++++.++||||+++++++...+..++|||++
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  101 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM  101 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred             hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCC
Confidence            378899999999999999998889999999986543  233466789999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      ++ +|.+.+......+++..++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++.......  ..
T Consensus       102 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~  175 (311)
T 3niz_A          102 EK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV--RS  175 (311)
T ss_dssp             SE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--C-
T ss_pred             CC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--cc
Confidence            75 888888776666999999999999999999999   9999999999999999999999999999998765432  22


Q ss_pred             eccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc-------
Q 039392          159 QTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP-------  230 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  230 (285)
                      .....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||......+.... ................       
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~  254 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK-IFSILGTPNPREWPQVQELPLWK  254 (311)
T ss_dssp             --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH-HHHHHCCCCTTTSGGGTTSHHHH
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHHCCCChHHhhhhhccchhh
Confidence            234567999999998876 5689999999999999999999999986544433222 2111111111110000       


Q ss_pred             --cc-cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 --NL-LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 --~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .. .............+++++.+|+.+||..||.+|||++|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence              00 000000111223456789999999999999999999999873


No 40 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=3.6e-48  Score=322.30  Aligned_cols=258  Identities=24%  Similarity=0.390  Sum_probs=213.0

Q ss_pred             CCCCCceecccCceEEEEEEe------CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|.+.+.||+|+||.||+|..      .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  103 (314)
T 2ivs_A           24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLL  103 (314)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEE
Confidence            367889999999999999964      345889999987543 3455778899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCC-----------------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 039392           74 VLEYMPHGSLEKYLHSSN-----------------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSN  130 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~n  130 (285)
                      |||++++++|.+++....                       ..++...++.++.||+.||.|||   ++|++|+||||+|
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp~N  180 (314)
T 2ivs_A          104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARN  180 (314)
T ss_dssp             EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGG
T ss_pred             EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccchhe
Confidence            999999999999987543                       23889999999999999999999   9999999999999


Q ss_pred             eeeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccc
Q 039392          131 VLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGE  209 (285)
Q Consensus       131 ili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~  209 (285)
                      |+++.++.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||.......
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  260 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER  260 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999999987755433333344556788999999988889999999999999999999 999987643322


Q ss_pred             hhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          210 MTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      .. ...... ..                  ...+..++.++.+++.+||..||.+|||++++++.|+++.++
T Consensus       261 ~~-~~~~~~-~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          261 LF-NLLKTG-HR------------------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HH-HHHHTT-CC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HH-HHhhcC-Cc------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            21 111100 00                  001234567799999999999999999999999999998765


No 41 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=3.1e-48  Score=325.01  Aligned_cols=247  Identities=21%  Similarity=0.288  Sum_probs=204.9

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+++.. +|+.||+|++....   ....+.+.+|+.+++.++||||+++++++...+.+++|||
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E   85 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence            4788999999999999999754 69999999987542   2345667889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |+++++|.+++.+.. .+++..++.++.||+.||.|||   ++|++||||||+||+++.+|.++|+|||++.......  
T Consensus        86 ~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--  159 (337)
T 1o6l_A           86 YANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--  159 (337)
T ss_dssp             CCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--
T ss_pred             CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--
Confidence            999999999987654 3899999999999999999999   9999999999999999999999999999997543221  


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .......+|+.|+|||++.+..++.++|+||||+++|+|++|..||........ .........                
T Consensus       160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~----------------  222 (337)
T 1o6l_A          160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELILMEEI----------------  222 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC----------------
T ss_pred             CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH-HHHHHcCCC----------------
Confidence            122345689999999999999999999999999999999999999975332211 111111000                


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCC-----CHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----s~~eil~~  274 (285)
                          ..+..+++++.++|.+||..||.+||     ++++++++
T Consensus       223 ----~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          223 ----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             ----CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             ----CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence                01224567799999999999999999     89999875


No 42 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.6e-48  Score=330.31  Aligned_cols=260  Identities=24%  Similarity=0.389  Sum_probs=211.8

Q ss_pred             CCCCCceecccCceEEEEEEe------CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccC-CCCccccccceeccCC-ce
Q 039392            1 GFSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEE-FK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~   71 (285)
                      +|++.+.||+|+||.||+|.+      .+++.||+|++.... ....+.+.+|+++++++ +||||+++++++...+ ..
T Consensus        23 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~  102 (359)
T 3vhe_A           23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL  102 (359)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCC
T ss_pred             ceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCce
Confidence            377889999999999999962      346889999987543 34456788999999999 7999999999987754 48


Q ss_pred             EEEEeccCCCCHHHhhhcCCC-----------------------------------------------------------
Q 039392           72 ALVLEYMPHGSLEKYLHSSNY-----------------------------------------------------------   92 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~-----------------------------------------------------------   92 (285)
                      ++||||+++++|.+++.....                                                           
T Consensus       103 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (359)
T 3vhe_A          103 MVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAP  182 (359)
T ss_dssp             EEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------------
T ss_pred             EEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccc
Confidence            999999999999999865432                                                           


Q ss_pred             ------ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceeccccccc
Q 039392           93 ------ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATI  166 (285)
Q Consensus        93 ------~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~  166 (285)
                            .++...++.++.||+.||.|||   ++|++|+||||+||+++.++.++|+|||++................+++
T Consensus       183 ~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~  259 (359)
T 3vhe_A          183 EDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL  259 (359)
T ss_dssp             -CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred             cchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence                  1888999999999999999999   9999999999999999999999999999998765544333445566788


Q ss_pred             cccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchhhhhhH
Q 039392          167 GYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQ  245 (285)
Q Consensus       167 ~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      .|+|||.+.+..++.++||||||+++|+|++ |..||...................                   ..+..
T Consensus       260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-------------------~~~~~  320 (359)
T 3vhe_A          260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-------------------RAPDY  320 (359)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC-------------------CCCTT
T ss_pred             eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC-------------------CCCCC
Confidence            9999999988899999999999999999998 999997654433322222111110                   01223


Q ss_pred             hHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          246 CVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       246 ~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      +++++.+++.+||..||.+|||+++++++|+++.+..
T Consensus       321 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          321 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            5667999999999999999999999999999998764


No 43 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2.4e-48  Score=330.43  Aligned_cols=258  Identities=25%  Similarity=0.461  Sum_probs=201.2

Q ss_pred             CCCCCceecccCceEEEEEEeC----CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG----DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||+|...    ++..||+|.+.... ....+.+.+|+.++++++||||+++++++......++||
T Consensus        46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  125 (373)
T 2qol_A           46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT  125 (373)
T ss_dssp             GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence            4889999999999999999753    57789999987543 344567889999999999999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.+||+|||++........
T Consensus       126 e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  202 (373)
T 2qol_A          126 EYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE  202 (373)
T ss_dssp             ECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence            999999999999877666999999999999999999999   99999999999999999999999999999987654321


Q ss_pred             cc-eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          156 ST-IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       156 ~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      .. ......++..|+|||.+.+..++.++||||||+++|++++ |..||......+.. ......               
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~-~~i~~~---------------  266 (373)
T 2qol_A          203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEG---------------  266 (373)
T ss_dssp             -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH-HHHHTT---------------
T ss_pred             cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcC---------------
Confidence            11 1122335678999999998899999999999999999998 99998654322211 111000               


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                          .....+..++.++.+++.+||+.||.+|||++++++.|+++.++
T Consensus       267 ----~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          267 ----YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             ----EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence                00111234567799999999999999999999999999998764


No 44 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-48  Score=328.81  Aligned_cols=259  Identities=26%  Similarity=0.416  Sum_probs=211.1

Q ss_pred             CCCCCceecccCceEEEEEEeC------CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG------DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|++.+.||+|+||.||+|...      +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  127 (343)
T 1luf_A           48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL  127 (343)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEE
Confidence            4788999999999999999753      35889999987543 3445778899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCC-----------------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 039392           74 VLEYMPHGSLEKYLHSSN-----------------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSN  130 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~n  130 (285)
                      |||++++++|.+++....                       ..++...++.++.||+.||.|||   ++|++|+||||+|
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~N  204 (343)
T 1luf_A          128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRN  204 (343)
T ss_dssp             EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred             EEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcce
Confidence            999999999999987632                       45889999999999999999999   9999999999999


Q ss_pred             eeeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccc
Q 039392          131 VLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGE  209 (285)
Q Consensus       131 ili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~  209 (285)
                      |+++.++.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+
T Consensus       205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  284 (343)
T 1luf_A          205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  284 (343)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence            9999999999999999987655433333345567889999999988889999999999999999999 999987643222


Q ss_pred             hhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          210 MTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      .... ......                   ...+..++.++.+++++||..||.+|||++++++.|+++.+.+
T Consensus       285 ~~~~-~~~~~~-------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          285 VIYY-VRDGNI-------------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             HHHH-HHTTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             HHHH-HhCCCc-------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence            1111 100000                   0012345677999999999999999999999999999987654


No 45 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=8.7e-48  Score=316.90  Aligned_cols=268  Identities=23%  Similarity=0.272  Sum_probs=207.4

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++....  ......+.+|+.++++++||||+++++++...+..++|||+
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   82 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence            488899999999999999975 468999999987543  33446788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +++ ++.+.+......+++..++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++.......  .
T Consensus        83 ~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~  156 (292)
T 3o0g_A           83 CDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--R  156 (292)
T ss_dssp             CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--S
T ss_pred             CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--c
Confidence            976 676666665556999999999999999999999   9999999999999999999999999999998765332  2


Q ss_pred             eeccccccccccCCcccCCCc-cCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccc-----
Q 039392          158 IQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN-----  231 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  231 (285)
                      ......+++.|+|||.+.+.. ++.++||||||+++++|++|..||.............................     
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (292)
T 3o0g_A          157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY  236 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred             cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence            234456789999999987765 89999999999999999999988654443333333332222211111100000     


Q ss_pred             ----ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          232 ----LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       232 ----~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                          ...............+.++.+|+++||+.||.+|||++|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                0000011111223567789999999999999999999999864


No 46 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.2e-48  Score=320.72  Aligned_cols=259  Identities=24%  Similarity=0.406  Sum_probs=207.3

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc---chhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ---YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      .|++.+.||+|+||.||++.. .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   91 (294)
T 4eqm_A           12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME   91 (294)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence            478899999999999999975 47899999998543   23455778899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++.... .++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++....... .
T Consensus        92 ~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  166 (294)
T 4eqm_A           92 YIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-L  166 (294)
T ss_dssp             CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred             CCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc-c
Confidence            999999999997655 4899999999999999999999   9999999999999999999999999999997665432 1


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .......+++.|+|||.+.+..++.++||||||+++|+|++|..||.................                .
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~----------------~  230 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV----------------P  230 (294)
T ss_dssp             --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC----------------C
T ss_pred             cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC----------------C
Confidence            222345689999999999999999999999999999999999999976433222221111000                0


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCC-CHHHHHHHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRI-NAKEIVTKLVKIRD  280 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-s~~eil~~l~~l~~  280 (285)
                      .........+++.+.+++.+||+.||.+|| +++++.+.|+.+..
T Consensus       231 ~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          231 NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence            000111234677899999999999999998 99999999887653


No 47 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=7.8e-48  Score=321.18  Aligned_cols=248  Identities=25%  Similarity=0.330  Sum_probs=206.2

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||||+++++++...+..++|||++++
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            345678999999999999865 7999999999876666667788999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      ++|.+++...  .++...++.++.|++.||.|||   +.|++|+||+|+||+++.++.++|+|||++........  ...
T Consensus       127 ~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~  199 (321)
T 2c30_A          127 GALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRK  199 (321)
T ss_dssp             CBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--CBC
T ss_pred             CCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc--ccc
Confidence            9999998654  3899999999999999999999   99999999999999999999999999999987654321  223


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchh
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF  240 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      ...+++.|+|||.+.+..++.++||||||+++++|++|..||......+. ....... ...                .+
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~-~~~----------------~~  261 (321)
T 2c30_A          200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-MKRLRDS-PPP----------------KL  261 (321)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHS-SCC----------------CC
T ss_pred             cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhcC-CCC----------------Cc
Confidence            45689999999999999999999999999999999999999975432211 1111110 000                01


Q ss_pred             hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .....+++++.+++.+||..||.+|||+++++++
T Consensus       262 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          262 KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1123456779999999999999999999999874


No 48 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=7e-48  Score=328.39  Aligned_cols=251  Identities=20%  Similarity=0.292  Sum_probs=208.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +|++.+.||+|+||.||+|.. .+++.+|+|++..........+.+|+++++.++||||+++++++......++|||++.
T Consensus        52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  131 (387)
T 1kob_A           52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  131 (387)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence            477889999999999999975 4689999999987655556678899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--CCCcEEEeeeccceecCcccccc
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD--DNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~--~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +++|.+++......+++..++.++.||+.||.|||   ++|++|+||||+||+++  ..+.++|+|||++........  
T Consensus       132 gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--  206 (387)
T 1kob_A          132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--  206 (387)
T ss_dssp             CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--
T ss_pred             CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc--
Confidence            99999999876656999999999999999999999   99999999999999997  457899999999987765322  


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                       .....+|+.|+|||++.+..++.++||||||+++|+|++|..||......+. ...........               
T Consensus       207 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~~i~~~~~~~---------------  269 (387)
T 1kob_A          207 -VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQNVKRCDWEF---------------  269 (387)
T ss_dssp             -EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHHCCCCC---------------
T ss_pred             -eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCC---------------
Confidence             2334689999999999999999999999999999999999999976432211 11111110000               


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                       .......+++++.++|.+||..||.+|||+++++++
T Consensus       270 -~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          270 -DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             -CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             -CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence             000123456779999999999999999999999874


No 49 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.5e-47  Score=319.39  Aligned_cols=271  Identities=21%  Similarity=0.289  Sum_probs=210.3

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCC--ceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE--FKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~   77 (285)
                      |++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++....  ..++|||+
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   90 (319)
T 4euu_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF   90 (319)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence            788999999999999999754 58999999987543 233566778999999999999999999987654  78999999


Q ss_pred             cCCCCHHHhhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCcEEEeeeccceecC
Q 039392           78 MPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili----~~~~~~~i~df~~~~~~~  151 (285)
                      +++++|.+++.....  .++...++.++.|++.||.|||   +.|++|+||||+||++    +.++.+||+|||++....
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            999999999976433  2899999999999999999999   9999999999999999    788899999999998765


Q ss_pred             cccccceeccccccccccCCcccC--------CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhh---hhhhhhc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGK--------EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK---HWVNDWL  220 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~--------~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~---~~~~~~~  220 (285)
                      ....   .....+++.|+|||.+.        +..++.++||||||+++|+|++|..||...........   ......+
T Consensus       168 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p  244 (319)
T 4euu_A          168 DDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (319)
T ss_dssp             TTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred             CCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence            5321   23456899999999875        56789999999999999999999999975443332222   2222221


Q ss_pred             CCCccccccccc-----cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          221 PISTKEIVDPNL-----LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       221 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ............     ....+.........+..+.+++++||+.||.+|||++|++++..+-
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            111110000000     0011111223467788899999999999999999999999998753


No 50 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1e-48  Score=332.21  Aligned_cols=258  Identities=24%  Similarity=0.377  Sum_probs=208.5

Q ss_pred             CCCCCceecccCceEEEEEEe------CCCcEEEEEEeecc-chhHHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQ-YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|++.+.||+|+||+||+|..      .+++.||+|++... .......+.+|+.+++.++||||+++++++......++
T Consensus        72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  151 (367)
T 3l9p_A           72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI  151 (367)
T ss_dssp             GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence            367889999999999999973      24678999998643 23444568889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCC------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---cEEEeee
Q 039392           74 VLEYMPHGSLEKYLHSSN------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM---VAHLSDF  144 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~---~~~i~df  144 (285)
                      |||++++++|.+++....      ..++...++.++.||+.||.|||   ++|++||||||+||+++.+|   .++|+||
T Consensus       152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~DF  228 (367)
T 3l9p_A          152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDF  228 (367)
T ss_dssp             EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECCC
Confidence            999999999999987543      34889999999999999999999   99999999999999999555   5999999


Q ss_pred             ccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCC
Q 039392          145 GIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      |++................+++.|+|||.+.+..++.++||||||+++++|++ |..||......+.... ..... .  
T Consensus       229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~-i~~~~-~--  304 (367)
T 3l9p_A          229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF-VTSGG-R--  304 (367)
T ss_dssp             HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHTTC-C--
T ss_pred             ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCC-C--
Confidence            99976543332233344567889999999988899999999999999999998 9999876432221111 10000 0  


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                                      ...+..++.++.+++.+||+.||.+|||+++++++|+.+.++
T Consensus       305 ----------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          305 ----------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             ----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence                            011234567799999999999999999999999999998764


No 51 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=4.8e-48  Score=322.85  Aligned_cols=258  Identities=26%  Similarity=0.440  Sum_probs=196.0

Q ss_pred             CCCCCceecccCceEEEEEEeCC-C---cEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccCCce---
Q 039392            1 GFSENNLIGRGGFGSVFKARLGD-G---MEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFK---   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~-~---~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~---   71 (285)
                      +|++.+.||+|+||+||+|.... +   ..||+|++...  .....+.+.+|+++++.++||||+++++++......   
T Consensus        24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  103 (323)
T 3qup_A           24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL  103 (323)
T ss_dssp             -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred             HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence            48889999999999999997543 3   27999998754  344567788999999999999999999999776554   


Q ss_pred             ---EEEEeccCCCCHHHhhhcCC-----CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEee
Q 039392           72 ---ALVLEYMPHGSLEKYLHSSN-----YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD  143 (285)
Q Consensus        72 ---~~v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~d  143 (285)
                         +++||++.+++|.+++....     ..++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|
T Consensus       104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl~D  180 (323)
T 3qup_A          104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVAD  180 (323)
T ss_dssp             -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred             CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEEee
Confidence               89999999999999885432     24889999999999999999999   99999999999999999999999999


Q ss_pred             eccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCC
Q 039392          144 FGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPI  222 (285)
Q Consensus       144 f~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~  222 (285)
                      ||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+..... .....  
T Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~~--  257 (323)
T 3qup_A          181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL-IGGNR--  257 (323)
T ss_dssp             CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-HTTCC--
T ss_pred             ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH-hcCCC--
Confidence            999987655433333334556778999999998899999999999999999999 89998764433222111 11000  


Q ss_pred             CccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          223 STKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                                       ...+..++.++.+++.+||..||.+|||++++++.|+++.+.
T Consensus       258 -----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          258 -----------------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             -----------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -----------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                             001234567799999999999999999999999999999864


No 52 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=5.4e-48  Score=321.06  Aligned_cols=262  Identities=24%  Similarity=0.359  Sum_probs=216.6

Q ss_pred             CCCCCceecccCceEEEEEEe------CCCcEEEEEEeeccch-hHHHHHHHHHHHHccC-CCCccccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||.||+|..      .+++.||+|++..... ...+.+.+|+.+++++ +||||+++++++...+..+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~  103 (313)
T 1t46_A           24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL  103 (313)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence            367889999999999999973      3578899999875543 3457788999999999 8999999999999999999


Q ss_pred             EEEeccCCCCHHHhhhcCCC-----------------ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC
Q 039392           73 LVLEYMPHGSLEKYLHSSNY-----------------ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD  135 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~  135 (285)
                      +|||++++++|.+++.....                 .++...++.++.|++.||.|||   ++|++|+||||+||+++.
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTH  180 (313)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEET
T ss_pred             EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEcC
Confidence            99999999999999876542                 3889999999999999999999   999999999999999999


Q ss_pred             CCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhh
Q 039392          136 NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKH  214 (285)
Q Consensus       136 ~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~  214 (285)
                      ++.++|+|||++................+++.|+|||.+.+..++.++||||||+++++|++ |..||............
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  260 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM  260 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHH
Confidence            99999999999987765443333445567788999999988899999999999999999999 99998765433322221


Q ss_pred             hhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHhc
Q 039392          215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLR  284 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~~  284 (285)
                      .......                   ..+..++.++.+++.+||..||.+|||++++++.|+++.++...
T Consensus       261 ~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~  311 (313)
T 1t46_A          261 IKEGFRM-------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN  311 (313)
T ss_dssp             HHHTCCC-------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred             hccCCCC-------------------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence            1111100                   01234567799999999999999999999999999999987654


No 53 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.9e-48  Score=314.82  Aligned_cols=256  Identities=27%  Similarity=0.429  Sum_probs=212.4

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +|++.+.||+|+||.||++...+++.||+|++..... ..+.+.+|+++++.++||||+++++++...+..+++||++++
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (267)
T 3t9t_A            9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH   87 (267)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred             heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence            3678899999999999999988888999999875533 336788999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      ++|.+++......++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++....... .....
T Consensus        88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~  163 (267)
T 3t9t_A           88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSST  163 (267)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTT
T ss_pred             CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-ccccc
Confidence            9999999877666899999999999999999999   9999999999999999999999999999998664422 11223


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...++..|+|||.+.+..++.++|+||||+++++|++ |..||......+.. ........                   
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~i~~~~~-------------------  223 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFR-------------------  223 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HHHHTTCC-------------------
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH-HHHhcCCc-------------------
Confidence            3456778999999988889999999999999999999 89998754322111 11111000                   


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      ...+...+.++.+++.+||..||.+|||++++++.|+++.++
T Consensus       224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          224 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            001223466789999999999999999999999999999875


No 54 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.6e-48  Score=329.03  Aligned_cols=257  Identities=28%  Similarity=0.437  Sum_probs=211.2

Q ss_pred             CCCCceecccCceEEEEEEe--------CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccC-CCCccccccceeccCCce
Q 039392            2 FSENNLIGRGGFGSVFKARL--------GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFK   71 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~--------~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   71 (285)
                      |.+.+.||+|+||+||+|..        .++..||+|++.... ......+.+|+++++.+ +||||+++++++...+..
T Consensus        71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~  150 (382)
T 3tt0_A           71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL  150 (382)
T ss_dssp             EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCce
Confidence            66789999999999999974        224679999987543 34457788999999999 899999999999999999


Q ss_pred             EEEEeccCCCCHHHhhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC
Q 039392           72 ALVLEYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN  136 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~  136 (285)
                      ++|||++++++|.+++....               ..+++..++.++.||+.||.|||   +.|++|+||||+||+++.+
T Consensus       151 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~  227 (382)
T 3tt0_A          151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTED  227 (382)
T ss_dssp             EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTT
T ss_pred             EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEcCC
Confidence            99999999999999987643               34899999999999999999999   9999999999999999999


Q ss_pred             CcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhh
Q 039392          137 MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHW  215 (285)
Q Consensus       137 ~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~  215 (285)
                      +.+||+|||++................+++.|+|||.+.+..++.++||||||+++++|++ |..||......+. ....
T Consensus       228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~-~~~~  306 (382)
T 3tt0_A          228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-FKLL  306 (382)
T ss_dssp             CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-HHHH
T ss_pred             CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHH
Confidence            9999999999987655433333344567788999999999999999999999999999999 9999875432221 1111


Q ss_pred             hhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          216 VNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      .... .                  ...+..+++++.+++.+||..||.+|||++++++.|+++...
T Consensus       307 ~~~~-~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          307 KEGH-R------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             HTTC-C------------------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCC-C------------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            1100 0                  001234567799999999999999999999999999999854


No 55 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=5.7e-47  Score=314.14  Aligned_cols=267  Identities=28%  Similarity=0.444  Sum_probs=211.1

Q ss_pred             CCCceecccCceEEEEEEeCCCcEEEEEEeeccc----hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            3 SENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY----GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         3 ~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      ..++.||+|+||.||+|.. +++.+|+|++....    ....+.+.+|+.+++.++||||+++++++...+..+++||++
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  112 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM  112 (307)
T ss_dssp             TTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             ccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence            4458999999999999986 58899999986432    345577889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcC--CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           79 PHGSLEKYLHSS--NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        79 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++|.+++...  ...++...++.++.|++.||.|||   +.|++|+||+|+||+++.++.++|+|||++.........
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  189 (307)
T 2nru_A          113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT  189 (307)
T ss_dssp             TTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC
T ss_pred             CCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc
Confidence            999999998643  334889999999999999999999   999999999999999999999999999999876554333


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhc-CCCccccccccccCc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWL-PISTKEIVDPNLLSR  235 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  235 (285)
                      .......+++.|+|||.+.+ .++.++||||||+++|+|++|..||.................. ........+....  
T Consensus       190 ~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  266 (307)
T 2nru_A          190 VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN--  266 (307)
T ss_dssp             EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCS--
T ss_pred             ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccccc--
Confidence            33345578999999998765 5899999999999999999999999765443322111111000 1111111111110  


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                           ......+..+.+++.+||..||.+|||++++++.|+++..+
T Consensus       267 -----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s  307 (307)
T 2nru_A          267 -----DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS  307 (307)
T ss_dssp             -----CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred             -----ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence                 11345678899999999999999999999999999998653


No 56 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.1e-48  Score=322.10  Aligned_cols=249  Identities=21%  Similarity=0.304  Sum_probs=205.2

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccch------hHHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG------RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      |++.+.||+|+||.||++... +++.||+|++.....      ...+.+.+|+.+++.++||||+++++++......++|
T Consensus        13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   92 (326)
T 2y0a_A           13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI   92 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            778899999999999999754 689999999875432      1356788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----cEEEeeeccceec
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLL  150 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~----~~~i~df~~~~~~  150 (285)
                      ||++++++|.+++.... .+++..++.++.|++.||.|||   +.|++|+||||+||+++.++    .++|+|||++...
T Consensus        93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  168 (326)
T 2y0a_A           93 LELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI  168 (326)
T ss_dssp             EECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence            99999999999997654 4899999999999999999999   99999999999999998877    8999999999876


Q ss_pred             CcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          151 TREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      ....   ......+++.|+|||++.+..++.++||||||+++|+|++|..||......+. ..........         
T Consensus       169 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~---------  235 (326)
T 2y0a_A          169 DFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNYE---------  235 (326)
T ss_dssp             CTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHHTCCC---------
T ss_pred             CCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHhcCCC---------
Confidence            5432   12345689999999999988999999999999999999999999965332211 1111110000         


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                             ........++.++.+++++||..||.+|||+++++++
T Consensus       236 -------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          236 -------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             -------CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             -------cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                   0011123557789999999999999999999999974


No 57 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.3e-47  Score=331.97  Aligned_cols=251  Identities=20%  Similarity=0.278  Sum_probs=204.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||+||++.. .+|+.+|+|++....  ....+.+.+|+++++.++||||+++++++...+..++|||+
T Consensus        12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~   91 (444)
T 3soa_A           12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL   91 (444)
T ss_dssp             HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence            378899999999999999974 578999999987543  33456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCcEEEeeeccceecCccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~---~~~~~~i~df~~~~~~~~~~  154 (285)
                      +++++|.+.+..... +++..++.++.||+.||.|||   ++|++||||||+||+++   .++.+||+|||++.......
T Consensus        92 ~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           92 VTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             CBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             CCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            999999998876554 999999999999999999999   99999999999999998   56889999999997765432


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                        .......+++.|+|||++.+..++.++||||||+++|+|++|..||......+. ...........+           
T Consensus       168 --~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~~~~~-----------  233 (444)
T 3soa_A          168 --QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL-YQQIKAGAYDFP-----------  233 (444)
T ss_dssp             --CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCCCC-----------
T ss_pred             --ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHhCCCCCC-----------
Confidence              122345789999999999998999999999999999999999999965432221 111111111100           


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                           ......+++++.+++.+||..||.+|||++|+|++
T Consensus       234 -----~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          234 -----SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             -----TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -----ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                 01123457789999999999999999999999874


No 58 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=6e-48  Score=317.25  Aligned_cols=267  Identities=22%  Similarity=0.313  Sum_probs=203.5

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccch--hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|...+++.+|+|++.....  ...+.+.+|+++++.++||||+++++++...+..++|||++
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (288)
T 1ob3_A            3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL   82 (288)
T ss_dssp             SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence            5888999999999999999888899999999865432  22356778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      ++ +|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.+||+|||++.......  ..
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~  156 (288)
T 1ob3_A           83 DQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RK  156 (288)
T ss_dssp             SE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             CC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--cc
Confidence            76 999998776666999999999999999999999   9999999999999999999999999999997654321  12


Q ss_pred             eccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccc--------cc
Q 039392          159 QTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI--------VD  229 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  229 (285)
                      .....+++.|+|||.+.+. .++.++||||||+++|+|++|..||......+.... .............        .+
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR-IFRILGTPNSKNWPNVTELPKYD  235 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHHCCCChhhchhhhcccccc
Confidence            2344678999999988764 589999999999999999999999976443222211 1111111100000        00


Q ss_pred             ccccCcccchh-hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 PNLLSREDIHF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      +......+..+ .....++.++.+++.+||..||.+|||+++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            00000000000 1123467789999999999999999999999864


No 59 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=6.8e-48  Score=317.07  Aligned_cols=259  Identities=26%  Similarity=0.409  Sum_probs=197.7

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      .|++.+.||+|+||+||+|...  ..+|+|++....  ....+.+.+|+++++.++||||++++++. .....++|||++
T Consensus        25 ~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~  101 (289)
T 3og7_A           25 QITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWC  101 (289)
T ss_dssp             SCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred             ceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEec
Confidence            4888999999999999999864  359999986543  44557788999999999999999999965 455688999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      ++++|.+++......++...++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++...........
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (289)
T 3og7_A          102 EGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ  178 (289)
T ss_dssp             CEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred             CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence            999999999776667999999999999999999999   99999999999999999999999999999986654332333


Q ss_pred             eccccccccccCCcccC---CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          159 QTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~---~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                      .....+++.|+|||.+.   +..++.++||||||+++++|++|..||........................         
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------  249 (289)
T 3og7_A          179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK---------  249 (289)
T ss_dssp             -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTS---------
T ss_pred             ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhh---------
Confidence            34556899999999886   556888999999999999999999999765443332222222111111100         


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                            ....++.++.+++.+||..||.+|||++++++.|+++.+
T Consensus       250 ------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          250 ------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             ------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence                  123456779999999999999999999999999998753


No 60 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=8.4e-48  Score=315.27  Aligned_cols=257  Identities=24%  Similarity=0.381  Sum_probs=198.8

Q ss_pred             CCCCCceecccCceEEEEEEeC----CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG----DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||+|...    .+..|++|.+.... ....+.+.+|+.+++.++||||+++++++. .+..++||
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~   94 (281)
T 1mp8_A           16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIM   94 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEE
Confidence            3678899999999999999753    24579999976533 345567889999999999999999999985 45688999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++........
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (281)
T 1mp8_A           95 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  171 (281)
T ss_dssp             ECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence            999999999999876666999999999999999999999   99999999999999999999999999999987654321


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                       .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+.... .....               
T Consensus       172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~-i~~~~---------------  234 (281)
T 1mp8_A          172 -YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGE---------------  234 (281)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-HHTTC---------------
T ss_pred             -cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH-HHcCC---------------
Confidence             12233446778999999988889999999999999999996 9999876443322111 10000               


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                          ....+..+++++.+++.+||..||.+|||++++++.|+++.++-
T Consensus       235 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          235 ----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence                00112356778999999999999999999999999999998754


No 61 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=5.2e-48  Score=323.37  Aligned_cols=245  Identities=25%  Similarity=0.384  Sum_probs=202.0

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++....   ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   89 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE   89 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence            588999999999999999985 578999999986432   2223568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |+ +++|.+++..... +++..++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++.......  
T Consensus        90 ~~-~g~l~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~--  162 (336)
T 3h4j_B           90 YA-GGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--  162 (336)
T ss_dssp             CC-CEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred             CC-CCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence            99 6689888866543 899999999999999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       ......+++.|+|||.+.+..+ ++++||||||+++|+|++|..||..........             ....      
T Consensus       163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-------------~i~~------  222 (336)
T 3h4j_B          163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-------------KVNS------  222 (336)
T ss_dssp             -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-------------CCCS------
T ss_pred             -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-------------HHHc------
Confidence             2234568999999999988775 789999999999999999999997532221100             0000      


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .....+...++++.+++++||..||.+|||++|++++
T Consensus       223 --~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          223 --CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             --SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             --CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence              0011133456779999999999999999999999864


No 62 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.9e-48  Score=324.27  Aligned_cols=260  Identities=25%  Similarity=0.364  Sum_probs=209.4

Q ss_pred             CCCCCceecccCceEEEEEEe------CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccC-CCCccccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||.||+|..      .++..||+|++.... ....+.+.+|+.+++++ +||||+++++++...+..+
T Consensus        46 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~  125 (344)
T 1rjb_A           46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY  125 (344)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccE
Confidence            367789999999999999974      346789999987543 23446788999999999 8999999999999999999


Q ss_pred             EEEeccCCCCHHHhhhcCCC----------------------ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 039392           73 LVLEYMPHGSLEKYLHSSNY----------------------ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSN  130 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~----------------------~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~n  130 (285)
                      +|||++++++|.+++.....                      .++...++.++.||+.||.|||   ++|++|+||||+|
T Consensus       126 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~N  202 (344)
T 1rjb_A          126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARN  202 (344)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGG
T ss_pred             EEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhh
Confidence            99999999999999976532                      2788899999999999999999   9999999999999


Q ss_pred             eeeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccc
Q 039392          131 VLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGE  209 (285)
Q Consensus       131 ili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~  209 (285)
                      |+++.++.++|+|||++................+++.|+|||.+.+..++.++||||||+++++|++ |..||.......
T Consensus       203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  282 (344)
T 1rjb_A          203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA  282 (344)
T ss_dssp             EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence            9999999999999999987655433333445567888999999988889999999999999999998 999997654332


Q ss_pred             hhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          210 MTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      .......... .                  ...+..+++++.+++.+||..||.+|||+++++++|+.+....
T Consensus       283 ~~~~~~~~~~-~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          283 NFYKLIQNGF-K------------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             HHHHHHHTTC-C------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHHHHHhcCC-C------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence            2222111110 0                  0012235677999999999999999999999999999987543


No 63 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=3.3e-47  Score=312.67  Aligned_cols=251  Identities=28%  Similarity=0.451  Sum_probs=204.3

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchh-------HHHHHHHHHHHHccCCCCccccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGR-------VFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++......       ..+.+.+|+++++.++||||+++++++....  +
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~   97 (287)
T 4f0f_A           20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--R   97 (287)
T ss_dssp             TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--E
T ss_pred             cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--e
Confidence            477889999999999999975 57899999998643321       1156889999999999999999999997765  5


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCc-----EEEeeec
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ--VIHCDLKPSNVLLDDNMV-----AHLSDFG  145 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~h~di~~~nili~~~~~-----~~i~df~  145 (285)
                      +|||++++++|.+.+......++...++.++.|++.||.|||   ++|  ++|+||||+||+++.++.     ++|+|||
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence            999999999999988777667999999999999999999999   899  999999999999988776     9999999


Q ss_pred             cceecCcccccceeccccccccccCCcccC--CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC
Q 039392          146 IAKLLTREDISTIQTQTLATIGYMAPEYGK--EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~--~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      ++.....     ......+++.|+|||.+.  ...++.++||||||+++|+|++|..||...................  
T Consensus       175 ~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--  247 (287)
T 4f0f_A          175 LSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL--  247 (287)
T ss_dssp             TCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC--
T ss_pred             ccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC--
Confidence            9975433     223456889999999983  4568899999999999999999999997654443322221111100  


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                                     ....+..+++++.+++.+||..||.+|||++++++.|+++
T Consensus       248 ---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          248 ---------------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             ---------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ---------------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence                           0011234567799999999999999999999999999864


No 64 
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.2e-47  Score=322.12  Aligned_cols=276  Identities=26%  Similarity=0.357  Sum_probs=201.8

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHH--HccCCCCcccccccee-----ccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEM--MKSIHHRNIIKVISSC-----SNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~--l~~l~h~~i~~~~~~~-----~~~~~~~~   73 (285)
                      +|++.+.||+|+||.||+|+. +++.||+|++.....   ..+..|.++  +..++|+||+++++.+     ......++
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             SEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             HhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            478899999999999999976 689999999875433   233334444  4458999999999743     33446789


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCC---------CeeecCCCCCCeeeCCCCcEEEeee
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA---------QVIHCDLKPSNVLLDDNMVAHLSDF  144 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~---------~~~h~di~~~nili~~~~~~~i~df  144 (285)
                      |||++++++|.+++....  .+...++.++.||+.||.|||   +.         |++|+||||+||+++.++.+||+||
T Consensus        90 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence            999999999999997654  588889999999999999999   88         9999999999999999999999999


Q ss_pred             ccceecCcccc------cceeccccccccccCCcccCC-------CccCcchhhHHHHHHHHHHhhCCCCCccccccchh
Q 039392          145 GIAKLLTREDI------STIQTQTLATIGYMAPEYGKE-------GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT  211 (285)
Q Consensus       145 ~~~~~~~~~~~------~~~~~~~~~~~~~~~PE~~~~-------~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~  211 (285)
                      |++........      ........+|+.|+|||.+.+       ..++.++||||||+++|+|++|..||.........
T Consensus       165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~  244 (336)
T 3g2f_A          165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY  244 (336)
T ss_dssp             TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred             cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence            99987654321      112224468999999999876       45678999999999999999998776443221111


Q ss_pred             hhhhhhhhcCCCc-cc----cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHhcC
Q 039392          212 LKHWVNDWLPIST-KE----IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLLRN  285 (285)
Q Consensus       212 ~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~~~  285 (285)
                      ...+......... ..    ..........+..+.....+++++.+++.+||..||.+|||++|+++.|+++...+.||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             HHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence            1110000000000 00    00000111111112223456778999999999999999999999999999999988776


No 65 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.3e-47  Score=324.63  Aligned_cols=250  Identities=21%  Similarity=0.335  Sum_probs=205.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||++.. .+++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..++|||+
T Consensus        30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~  109 (362)
T 2bdw_A           30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL  109 (362)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            378899999999999999975 468999999987543  34456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC---CcEEEeeeccceecCccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~---~~~~i~df~~~~~~~~~~  154 (285)
                      +++++|.+.+.... .+++..++.++.||+.||.|||   ++|++|+||||+||+++.+   +.+||+|||++.......
T Consensus       110 ~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          110 VTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             CCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            99999999886654 4899999999999999999999   9999999999999999764   459999999998765432


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                         ......+++.|+|||++.+..++.++||||||+++|+|++|..||......+. ...........            
T Consensus       186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~i~~~~~~~------------  249 (362)
T 2bdw_A          186 ---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YAQIKAGAYDY------------  249 (362)
T ss_dssp             ---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCC------------
T ss_pred             ---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCC------------
Confidence               12345689999999999998999999999999999999999999975432211 11111111100            


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                          .......+++++.+++.+||..||.+|||+++++++
T Consensus       250 ----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          250 ----PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             ----CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ----CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                011124567789999999999999999999999875


No 66 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2.7e-47  Score=323.91  Aligned_cols=247  Identities=23%  Similarity=0.317  Sum_probs=202.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||++.. .+++.||+|++....   ......+.+|+++++.++||||+++++++...+..++|||
T Consensus        16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e   95 (384)
T 4fr4_A           16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVD   95 (384)
T ss_dssp             GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence            478899999999999999975 468899999986543   2344678889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++.+++|.+++..... +++..++.++.||+.||.|||   +.|++||||||+||+++.+|.++|+|||++.......  
T Consensus        96 ~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--  169 (384)
T 4fr4_A           96 LLLGGDLRYHLQQNVH-FKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--  169 (384)
T ss_dssp             CCTTEEHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred             cCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC--
Confidence            9999999999976544 999999999999999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCC---CccCcchhhHHHHHHHHHHhhCCCCCccccccchh-hhhhhhhhcCCCccccccccc
Q 039392          157 TIQTQTLATIGYMAPEYGKE---GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT-LKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  232 (285)
                       ......+|+.|+|||++.+   ..++.++|+||||+++|+|++|..||......... ........ .           
T Consensus       170 -~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~-~-----------  236 (384)
T 4fr4_A          170 -QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-V-----------  236 (384)
T ss_dssp             -CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC-C-----------
T ss_pred             -ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc-c-----------
Confidence             2245678999999999864   45899999999999999999999999754332211 11100000 0           


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCC-HHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRIN-AKEIVT  273 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps-~~eil~  273 (285)
                             ...+..++.++.++|.+||..||.+||+ ++++++
T Consensus       237 -------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 -------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             -------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             -------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence                   0012345677999999999999999998 777664


No 67 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=5.5e-48  Score=322.99  Aligned_cols=257  Identities=24%  Similarity=0.396  Sum_probs=202.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcE----EEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGME----VAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~----~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +|++.+.||+|+||+||+|.+ .+++.    |++|.+.... ....+.+.+|+.++++++||||+++++++.... .+++
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v   94 (327)
T 3poz_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI   94 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEE
T ss_pred             HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEE
Confidence            478889999999999999974 34443    5777765332 344567889999999999999999999998765 7799


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      ++++.+++|.+++......++...++.++.|++.||.|||   ++|++||||||+||+++.++.+||+|||++.......
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence            9999999999999877667999999999999999999999   9999999999999999999999999999998776544


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      .........++..|+|||.+.+..++.++||||||+++|+|++ |..||...........  .....             
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~--~~~~~-------------  236 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI--LEKGE-------------  236 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH--HHTTC-------------
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHH--HHcCC-------------
Confidence            3333344556788999999999999999999999999999999 9999976443322111  11000             


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                           ....+..++.++.+++.+||+.||.+|||++++++.|+.+.++
T Consensus       237 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          237 -----RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             -----CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             -----CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence                 0011234566799999999999999999999999999998753


No 68 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.9e-48  Score=321.14  Aligned_cols=269  Identities=23%  Similarity=0.404  Sum_probs=208.1

Q ss_pred             CCCCceecccCceEEEEEE-----eCCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccC--CceEE
Q 039392            2 FSENNLIGRGGFGSVFKAR-----LGDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNE--EFKAL   73 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~-----~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~   73 (285)
                      |++.+.||+|+||.||+|.     ..+++.||+|++.... ....+.+.+|+++++.++||||+++++++...  ...++
T Consensus        23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l  102 (302)
T 4e5w_A           23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL  102 (302)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred             hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence            6778999999999999997     3468999999987543 33456788999999999999999999999776  67899


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |||++++++|.+++......++...++.++.|++.||++||   ++|++|+||||+||+++.++.++|+|||++......
T Consensus       103 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          103 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence            99999999999999766666999999999999999999999   999999999999999999999999999999877654


Q ss_pred             ccc-ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC-cccccccc
Q 039392          154 DIS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS-TKEIVDPN  231 (285)
Q Consensus       154 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  231 (285)
                      ... .......++..|+|||.+.+..++.++||||||+++++|++|..|+.........   ......... ......  
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~--  254 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK---MIGPTHGQMTVTRLVN--  254 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH---HHCSCCGGGHHHHHHH--
T ss_pred             CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh---ccCCcccccCHHHHHH--
Confidence            322 2233456788899999999999999999999999999999999986432111000   000000000 000000  


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIR  279 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~  279 (285)
                       ..........+..+++++.+++.+||..||.+|||++++++.|+++.
T Consensus       255 -~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          255 -TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             -HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -HHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence             00000111123456778999999999999999999999999999886


No 69 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-47  Score=317.57  Aligned_cols=244  Identities=25%  Similarity=0.314  Sum_probs=204.2

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+++.. +|+.||+|++....   ....+.+.+|..+++.++||||+++++++......++|||
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e   86 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   86 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence            4788999999999999999754 79999999987542   2334667789999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++..... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.++|+|||++......   
T Consensus        87 ~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~---  159 (318)
T 1fot_A           87 YIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---  159 (318)
T ss_dssp             CCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred             CCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence            9999999999976554 899999999999999999999   999999999999999999999999999999876432   


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                        .....+|+.|+|||++.+..++.++|+||||+++|+|++|..||........ ..........               
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~---------------  221 (318)
T 1fot_A          160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEKILNAELR---------------  221 (318)
T ss_dssp             --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHCCCC---------------
T ss_pred             --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC---------------
Confidence              2345689999999999999999999999999999999999999976432211 1111111000               


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCC-----CHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----s~~eil~~  274 (285)
                           .+...+.++.+++.+||..||.+||     ++++++++
T Consensus       222 -----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          222 -----FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             -----CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -----CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence                 1223466799999999999999999     88998854


No 70 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=2.7e-47  Score=319.71  Aligned_cols=259  Identities=28%  Similarity=0.442  Sum_probs=211.0

Q ss_pred             CCCCCceecccCceEEEEEEe--------CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccC-CCCccccccceeccCCc
Q 039392            1 GFSENNLIGRGGFGSVFKARL--------GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEF   70 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~--------~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   70 (285)
                      +|++.+.||+|+||.||+|..        .++..||+|++.... ....+.+.+|+++++.+ +||||+++++++...+.
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  115 (334)
T 2pvf_A           36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP  115 (334)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCc
Confidence            367889999999999999975        346789999987543 34457788999999999 89999999999999999


Q ss_pred             eEEEEeccCCCCHHHhhhcCCC---------------ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC
Q 039392           71 KALVLEYMPHGSLEKYLHSSNY---------------ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD  135 (285)
Q Consensus        71 ~~~v~e~~~~~~L~~~~~~~~~---------------~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~  135 (285)
                      .++|||++++++|.+++.....               .++...++.++.||+.||.|||   +.|++|+||||+||+++.
T Consensus       116 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTE  192 (334)
T ss_dssp             CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECT
T ss_pred             eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEEcC
Confidence            9999999999999999876432               3788999999999999999999   999999999999999999


Q ss_pred             CCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhh
Q 039392          136 NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKH  214 (285)
Q Consensus       136 ~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~  214 (285)
                      ++.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+. ...
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~  271 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKL  271 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-HHH
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH-HHH
Confidence            99999999999987765433333344556788999999988889999999999999999999 9999876432221 111


Q ss_pred             hhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ..... .                  ...+..++.++.+++.+||..||.+|||++++++.|+++....
T Consensus       272 ~~~~~-~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          272 LKEGH-R------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHHTC-C------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HhcCC-C------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            11100 0                  0012345677999999999999999999999999999998653


No 71 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=4.1e-48  Score=326.22  Aligned_cols=246  Identities=23%  Similarity=0.303  Sum_probs=199.4

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||+||+|+. .+++.||+|++....   ......+.+|..+++.+ +||||+++++++...+.+++||
T Consensus        24 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~  103 (353)
T 3txo_A           24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM  103 (353)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence            578899999999999999975 468999999987542   23445677899999988 6999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      ||+++++|.+++.+... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.+||+|||++....... 
T Consensus       104 E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~-  178 (353)
T 3txo_A          104 EFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG-  178 (353)
T ss_dssp             ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred             eCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccCC-
Confidence            99999999999876554 999999999999999999999   9999999999999999999999999999997543221 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       .......+|+.|+|||++.+..++.++|+||||+++|+|++|..||......+. .........               
T Consensus       179 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~i~~~~~---------------  241 (353)
T 3txo_A          179 -VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL-FEAILNDEV---------------  241 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC---------------
T ss_pred             -ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCC---------------
Confidence             222345789999999999888899999999999999999999999976433221 111111100               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCH------HHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINA------KEIVT  273 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~------~eil~  273 (285)
                           ..+...+.++.+++++||..||.+||++      +++++
T Consensus       242 -----~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          242 -----VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             -----CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                 0022346678999999999999999998      77775


No 72 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=2.6e-47  Score=314.80  Aligned_cols=262  Identities=15%  Similarity=0.131  Sum_probs=213.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.....  .+.+.+|+.+++.+ +|++++++++++......++|||++
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A           11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            478899999999999999975 5799999999864432  25577899999999 7999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc-----EEEeeeccceecCcc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV-----AHLSDFGIAKLLTRE  153 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~-----~~i~df~~~~~~~~~  153 (285)
                       +++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.     ++|+|||++......
T Consensus        89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence             88999999877666999999999999999999999   999999999999999987776     999999999876543


Q ss_pred             ccc-----ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchh--hhhhhhhhcCCCccc
Q 039392          154 DIS-----TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT--LKHWVNDWLPISTKE  226 (285)
Q Consensus       154 ~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~  226 (285)
                      ...     .......+++.|+|||.+.+..++.++||||||+++|+|++|..||.........  ............   
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---  241 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP---  241 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC---
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc---
Confidence            221     1224456899999999999999999999999999999999999999764332211  111111000000   


Q ss_pred             cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          227 IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                                  .......+++++.+++.+||..||.+|||++++++.|+++.+++.
T Consensus       242 ------------~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          242 ------------LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             ------------HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ------------HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence                        000122467789999999999999999999999999999987653


No 73 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=1.2e-47  Score=312.56  Aligned_cols=250  Identities=24%  Similarity=0.401  Sum_probs=206.1

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccC--CceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNE--EFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|... ++.+|+|++....  ....+.+.+|+.++++++||||+++++++...  ...++|||
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (271)
T 3kmu_A           11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH   89 (271)
T ss_dssp             GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred             HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence            4788999999999999999874 8899999987543  34456788999999999999999999999876  78899999


Q ss_pred             ccCCCCHHHhhhcCCC-ccCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           77 YMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQ--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      ++++++|.+++..... .++...++.++.|++.||.|||   +++  ++|+||+|+||+++.++.+++.||++...... 
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-  165 (271)
T 3kmu_A           90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-  165 (271)
T ss_dssp             CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred             ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence            9999999999977543 4899999999999999999999   889  99999999999999999999999888754322 


Q ss_pred             cccceeccccccccccCCcccCCCccCc---chhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYGKEGRVSA---NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~---~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                            ....+++.|+|||.+.+...+.   ++||||||+++|+|++|..||..................          
T Consensus       166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----------  229 (271)
T 3kmu_A          166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR----------  229 (271)
T ss_dssp             ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC----------
T ss_pred             ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC----------
Confidence                  3345788999999988765544   799999999999999999999764333222111111000          


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                               ...+..+++++.+++.+||..||.+|||++++++.|+++++
T Consensus       230 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          230 ---------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             ---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                     01123456779999999999999999999999999999864


No 74 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=8.9e-47  Score=312.06  Aligned_cols=263  Identities=26%  Similarity=0.378  Sum_probs=201.2

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHcc--CCCCccccccceecc----CCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKS--IHHRNIIKVISSCSN----EEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~----~~~~~~v   74 (285)
                      +|++.+.||+|+||+||+|.. +++.||+|++.....   ..+..|.+++..  ++||||+++++++..    ....++|
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv   84 (301)
T 3q4u_A            9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI   84 (301)
T ss_dssp             GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH---HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc---hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence            488999999999999999987 689999999865432   344556666655  789999999998543    4568899


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG-----YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-----~~~~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      ||++++++|.+++...  .++...++.++.|++.||.|||..     .+.+++|+||||+||+++.++.+||+|||++..
T Consensus        85 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  162 (301)
T 3q4u_A           85 THYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM  162 (301)
T ss_dssp             ECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             hhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence            9999999999999654  489999999999999999999932     157999999999999999999999999999976


Q ss_pred             cCcccccc--eeccccccccccCCcccCCC------ccCcchhhHHHHHHHHHHhhC----------CCCCccccccchh
Q 039392          150 LTREDIST--IQTQTLATIGYMAPEYGKEG------RVSANGDVYSFGIMLIETFTR----------KKPTDEIFNGEMT  211 (285)
Q Consensus       150 ~~~~~~~~--~~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~~l~~ll~g----------~~p~~~~~~~~~~  211 (285)
                      ........  ......+|+.|+|||.+.+.      .++.++||||||+++|+|++|          ..||.........
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~  242 (301)
T 3q4u_A          163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS  242 (301)
T ss_dssp             EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc
Confidence            54432211  12334689999999998876      566899999999999999999          7777654433322


Q ss_pred             hhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          212 LKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ..............         ...........++.++.+++.+||..||.+|||++++++.|+++
T Consensus       243 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          243 FEDMRKVVCVDQQR---------PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHHTTSCCC---------CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhhhHHHhccCCC---------CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            22221111110000         00001112345778899999999999999999999999999876


No 75 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=4.6e-48  Score=329.70  Aligned_cols=251  Identities=21%  Similarity=0.275  Sum_probs=199.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++++.||+|+||+||+++.. +++.||+|++....   ....+.+.+|..+++++ +||||+++++++...+.+++||
T Consensus        53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~  132 (396)
T 4dc2_A           53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI  132 (396)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence            4788899999999999999754 68899999987543   22334577889988876 7999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      ||+++++|..++.+... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.+||+|||++......  
T Consensus       133 E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~--  206 (396)
T 4dc2_A          133 EYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--  206 (396)
T ss_dssp             ECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred             EcCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC--
Confidence            99999999999876554 999999999999999999999   999999999999999999999999999999753322  


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhh----hhhhhhhcCCCcccccccc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTL----KHWVNDWLPISTKEIVDPN  231 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  231 (285)
                      ........+|+.|+|||++.+..++.++|+||||+++|+|++|..||..........    ..........         
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~---------  277 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK---------  277 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC---------
T ss_pred             CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc---------
Confidence            122345678999999999999999999999999999999999999996532221110    0000000000         


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCH------HHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINA------KEIVT  273 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~------~eil~  273 (285)
                             ....+..++.++.++|++||+.||.+||++      +++++
T Consensus       278 -------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          278 -------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             -------CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             -------ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence                   001123456779999999999999999996      56654


No 76 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.4e-47  Score=311.96  Aligned_cols=258  Identities=23%  Similarity=0.364  Sum_probs=210.2

Q ss_pred             CCCCc-eecccCceEEEEEEe---CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            2 FSENN-LIGRGGFGSVFKARL---GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         2 y~~~~-~lg~G~~~~v~~~~~---~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      |.+.+ .||+|+||.||+|..   .++..||+|++.... ....+.+.+|+++++.++||||+++++++ ..+..++|||
T Consensus        11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e   89 (287)
T 1u59_A           11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVME   89 (287)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred             hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEE
Confidence            44555 899999999999964   367889999987643 34557788999999999999999999999 4556899999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++......++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.........
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  166 (287)
T 1u59_A           90 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  166 (287)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             eCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence            99999999999776666999999999999999999999   999999999999999999999999999999877543221


Q ss_pred             -ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          157 -TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       157 -~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                       .......+++.|+|||.+.+..++.++||||||+++++|++ |..||......+.. ...... ..             
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~i~~~-~~-------------  231 (287)
T 1u59_A          167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQG-KR-------------  231 (287)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-HHHHTT-CC-------------
T ss_pred             eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-HHHhcC-Cc-------------
Confidence             12223446788999999988889999999999999999998 99999764332211 111000 00             


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                           ...+..+++++.+++.+||..||.+|||+++++++|+++..+.-
T Consensus       232 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  275 (287)
T 1u59_A          232 -----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  275 (287)
T ss_dssp             -----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             -----CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence                 01123567789999999999999999999999999999987754


No 77 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=4.4e-47  Score=310.07  Aligned_cols=252  Identities=23%  Similarity=0.331  Sum_probs=207.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|+|++
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (276)
T 2yex_A            8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   87 (276)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence            4788999999999999999764 78999999987543 334567889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      ++++|.+++.... .++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||.+...........
T Consensus        88 ~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  163 (276)
T 2yex_A           88 SGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (276)
T ss_dssp             TTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             CCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence            9999999986544 4899999999999999999999   99999999999999999999999999999987644322223


Q ss_pred             eccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          159 QTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      .....+++.|+|||.+.+..+ +.++|+||||+++++|++|..||............+......                
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------  227 (276)
T 2yex_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY----------------  227 (276)
T ss_dssp             BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT----------------
T ss_pred             ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc----------------
Confidence            345568899999999887765 789999999999999999999997654433322222211000                


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .......+..+.+++.+||..||.+|||+++++++
T Consensus       228 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          228 --LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             --STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             --cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence              01123456779999999999999999999999863


No 78 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=9.7e-48  Score=324.35  Aligned_cols=250  Identities=20%  Similarity=0.283  Sum_probs=203.1

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch-----hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG-----RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      |++.+.||+|+||+||++.. .+++.||+|++.....     ...+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        26 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  105 (351)
T 3c0i_A           26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF  105 (351)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            77889999999999999975 4789999999864321     13567889999999999999999999999999999999


Q ss_pred             eccCCCCHHHhhhcC---CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc---EEEeeecccee
Q 039392           76 EYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV---AHLSDFGIAKL  149 (285)
Q Consensus        76 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~---~~i~df~~~~~  149 (285)
                      |++++++|.+.+...   ...+++..++.++.||+.||.|||   ++|++|+||||+||+++.++.   ++|+|||++..
T Consensus       106 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~  182 (351)
T 3c0i_A          106 EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ  182 (351)
T ss_dssp             ECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence            999999998877542   234899999999999999999999   999999999999999986554   99999999987


Q ss_pred             cCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          150 LTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .....  .......+|+.|+|||++.+..++.++||||||+++|+|++|..||.....  ............        
T Consensus       183 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~--------  250 (351)
T 3c0i_A          183 LGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYK--------  250 (351)
T ss_dssp             CCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCC--------
T ss_pred             ecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCC--------
Confidence            75432  122345689999999999998999999999999999999999999976321  111111111000        


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                              ........++.++.+++++||..||.+|||+.+++++
T Consensus       251 --------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          251 --------MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             --------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --------CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                    0111123567789999999999999999999999864


No 79 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.7e-47  Score=320.41  Aligned_cols=260  Identities=19%  Similarity=0.198  Sum_probs=211.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++.....  .+.+.+|+++++.+ +||||+++++++...+..++|||++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            588899999999999999985 5799999999875433  24577899999999 8999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc-----EEEeeeccceecCcc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV-----AHLSDFGIAKLLTRE  153 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~-----~~i~df~~~~~~~~~  153 (285)
                       +++|.+++......++...++.++.|++.||.|||   +.|++||||||+||+++.++.     ++|+|||++......
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~  163 (330)
T 2izr_A           88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP  163 (330)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred             -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence             88999999876666999999999999999999999   999999999999999998887     999999999876443


Q ss_pred             cccc-----eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchh--hhhhhhhhcCCCccc
Q 039392          154 DIST-----IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT--LKHWVNDWLPISTKE  226 (285)
Q Consensus       154 ~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~  226 (285)
                      ....     ......+|+.|+|||.+.+..++.++||||||+++|+|++|..||.........  .............  
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~--  241 (330)
T 2izr_A          164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI--  241 (330)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH--
T ss_pred             CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH--
Confidence            2111     123567899999999999999999999999999999999999999865332221  1111110000000  


Q ss_pred             cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          227 IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                                   ......++ ++.+++.+||..||.+||+++++++.|+++.+..
T Consensus       242 -------------~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          242 -------------EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             -------------HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             -------------HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence                         00011234 7999999999999999999999999999988765


No 80 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=6.5e-48  Score=322.60  Aligned_cols=273  Identities=25%  Similarity=0.349  Sum_probs=213.0

Q ss_pred             CCCCCceecccCceEEEEEE-----eCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceec--cCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKAR-----LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS--NEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~~   73 (285)
                      +|++.+.||+|+||.||++.     ..+++.||+|++........+.+.+|++++++++||||+++++++.  .....++
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l  103 (327)
T 3lxl_A           24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRL  103 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEE
T ss_pred             hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEE
Confidence            47789999999999999997     3468899999998776667778999999999999999999999875  5567899


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |||++++++|.+++......++...++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++......
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          104 VMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred             EEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence            99999999999999876556999999999999999999999   999999999999999999999999999999877543


Q ss_pred             ccc-ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          154 DIS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       154 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      ... .......++..|+|||.+.+..++.++||||||+++++|++|..||..............  ...........   
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~---  255 (327)
T 3lxl_A          181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE--RDVPALSRLLE---  255 (327)
T ss_dssp             CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------CCHHHHHHH---
T ss_pred             CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc--cccccHHHHHH---
Confidence            322 122345577889999999888999999999999999999999999865322111000000  00000000000   


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      ..........+..+++++.+++.+||..||.+|||+++++++|+.+...
T Consensus       256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          256 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            0000011112345678899999999999999999999999999988654


No 81 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=3.3e-47  Score=323.29  Aligned_cols=247  Identities=21%  Similarity=0.310  Sum_probs=200.3

Q ss_pred             CceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCCCCH
Q 039392            5 NNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGSL   83 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   83 (285)
                      .+.||+|+||.||+|.. .+|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            46799999999999975 57899999999876656667889999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--CCCCcEEEeeeccceecCcccccceecc
Q 039392           84 EKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL--DDNMVAHLSDFGIAKLLTREDISTIQTQ  161 (285)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili--~~~~~~~i~df~~~~~~~~~~~~~~~~~  161 (285)
                      .+++......+++..++.++.||+.||.|||   +.|++|+||||+||++  +.++.++|+|||++........   ...
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~  247 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKV  247 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCC
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---ccc
Confidence            9988766666999999999999999999999   9999999999999999  5778999999999987654321   233


Q ss_pred             ccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchhh
Q 039392          162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFV  241 (285)
Q Consensus       162 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (285)
                      ..+++.|+|||++.+..++.++||||||+++|+|++|..||......+. ............                ..
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~~----------------~~  310 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-LNNILACRWDLE----------------DE  310 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCCSC----------------SG
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCCCC----------------hh
Confidence            4689999999999988999999999999999999999999976432221 111111110000                01


Q ss_pred             hhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          242 AKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       242 ~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ....+++++.+|+.+||..||.+|||+++++++
T Consensus       311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          311 EFQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            123457789999999999999999999999973


No 82 
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=6.1e-47  Score=312.69  Aligned_cols=259  Identities=26%  Similarity=0.453  Sum_probs=205.7

Q ss_pred             CCCCceecccCceEEEEEEeCC----CcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCcccccccee-ccCCceEEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLGD----GMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSC-SNEEFKALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~----~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~~v~   75 (285)
                      |++.+.||+|+||+||+|...+    ...+++|.+.... ....+.+.+|+.++++++||||+++++++ ...+..++||
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  106 (298)
T 3f66_A           27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  106 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence            6778999999999999997432    3358899886533 34557788999999999999999999985 5567889999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++......++...++.++.|++.||.+||   ++|++|+||||+||+++.++.++|+|||++........
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  183 (298)
T 3f66_A          107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY  183 (298)
T ss_dssp             ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred             eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccccch
Confidence            999999999999876666899999999999999999999   99999999999999999999999999999987654332


Q ss_pred             c--ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhC-CCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          156 S--TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTR-KKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       156 ~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .  .......+++.|+|||.+.+..++.++||||||+++++|++| ..||......+.... ......            
T Consensus       184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~-~~~~~~------------  250 (298)
T 3f66_A          184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-LLQGRR------------  250 (298)
T ss_dssp             CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHH-HHTTCC------------
T ss_pred             hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHH-HhcCCC------------
Confidence            1  122344567889999999888999999999999999999995 455544322222111 111000            


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                             ...+..++..+.+++.+||..||.+|||++++++.|+++.+++.
T Consensus       251 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          251 -------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             -------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence                   00122345679999999999999999999999999999988764


No 83 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=9e-48  Score=313.41  Aligned_cols=249  Identities=27%  Similarity=0.434  Sum_probs=194.3

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccch----hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYG----RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|... ++.+|+|++.....    ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus         8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A            8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            4788899999999999999874 88999999865432    234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC---eeecCCCCCCeeeCC--------CCcEEEeeec
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ---VIHCDLKPSNVLLDD--------NMVAHLSDFG  145 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~---~~h~di~~~nili~~--------~~~~~i~df~  145 (285)
                      ++++++|.+++...  .++...++.++.|++.||.|||   ++|   ++|+||+|+||+++.        ++.++|+|||
T Consensus        87 ~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           87 FARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             CCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             cCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            99999999998643  4899999999999999999999   787   899999999999985        7889999999


Q ss_pred             cceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc
Q 039392          146 IAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK  225 (285)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                      ++.......    .....+++.|+|||.+.+..++.++||||||+++++|++|..||.................      
T Consensus       162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------  231 (271)
T 3dtc_A          162 LAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL------  231 (271)
T ss_dssp             C-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCC------
T ss_pred             ccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCC------
Confidence            998655432    1234688999999999888899999999999999999999999976433222111110000      


Q ss_pred             ccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          226 EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                                   ....+..+++++.+++.+||..||.+|||+++++++|+++
T Consensus       232 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          232 -------------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             -------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             -------------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence                         0011234567799999999999999999999999999864


No 84 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=5.4e-47  Score=315.14  Aligned_cols=259  Identities=26%  Similarity=0.424  Sum_probs=198.1

Q ss_pred             CCCCCceecccCceEEEEEEeC----CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCC-----
Q 039392            1 GFSENNLIGRGGFGSVFKARLG----DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE-----   69 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----   69 (285)
                      +|.+.+.||+|+||.||+|...    ++..||+|.+....  ....+.+.+|+.+++.++||||+++++++....     
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~  114 (313)
T 3brb_A           35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP  114 (313)
T ss_dssp             GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred             HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence            3678899999999999999642    35589999987542  345577889999999999999999999987654     


Q ss_pred             ceEEEEeccCCCCHHHhhhc-----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeee
Q 039392           70 FKALVLEYMPHGSLEKYLHS-----SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDF  144 (285)
Q Consensus        70 ~~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df  144 (285)
                      ..++|||++++++|.+++..     ....++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+||
T Consensus       115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~Df  191 (313)
T 3brb_A          115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADF  191 (313)
T ss_dssp             CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEECSC
T ss_pred             ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEeec
Confidence            45899999999999998842     2345899999999999999999999   999999999999999999999999999


Q ss_pred             ccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCC
Q 039392          145 GIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      |++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||........... ......   
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~~~---  267 (313)
T 3brb_A          192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY-LLHGHR---  267 (313)
T ss_dssp             SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HHTTCC---
T ss_pred             CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH-HHcCCC---
Confidence            99987654432233334556788999999998899999999999999999999 8888876433222111 111000   


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                                      ...+..+++++.+++.+||..||.+|||+++++++|+++.+++
T Consensus       268 ----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          268 ----------------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             ----------------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ----------------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence                            0012345677999999999999999999999999999998764


No 85 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=4.8e-47  Score=330.03  Aligned_cols=250  Identities=29%  Similarity=0.441  Sum_probs=206.8

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCC-ceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE-FKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e~~~~   80 (285)
                      |++.+.||+|+||.||+|... ++.||||+++...  ..+.+.+|+.++++++||||+++++++.... ..++|||++++
T Consensus       195 ~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~  271 (450)
T 1k9a_A          195 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK  271 (450)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred             eEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence            567889999999999999874 7899999987543  3467889999999999999999999976554 78999999999


Q ss_pred             CCHHHhhhcCCC-ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           81 GSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        81 ~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      ++|.+++..... .++...++.++.|++.||+|||   +++++||||+|+||+++.++.+||+|||++......     .
T Consensus       272 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~  343 (450)
T 1k9a_A          272 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----Q  343 (450)
T ss_dssp             CBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----c
Confidence            999999976543 3689999999999999999999   999999999999999999999999999999854432     1


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccc
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI  238 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                      ....++..|+|||.+.+..++.++||||||+++|+|++ |..||......+.... ....                   .
T Consensus       344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~-------------------~  403 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKG-------------------Y  403 (450)
T ss_dssp             ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH-HHTT-------------------C
T ss_pred             cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcC-------------------C
Confidence            22356778999999999999999999999999999998 9999976543322111 1000                   0


Q ss_pred             hhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      +...+..+++++.++|.+||..||.+|||++++++.|++++..-
T Consensus       404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~  447 (450)
T 1k9a_A          404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE  447 (450)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence            11123457788999999999999999999999999999998754


No 86 
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=3e-47  Score=318.42  Aligned_cols=272  Identities=26%  Similarity=0.427  Sum_probs=213.6

Q ss_pred             CCCCceecccCceEEEEEE-----eCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccC--CceEEE
Q 039392            2 FSENNLIGRGGFGSVFKAR-----LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNE--EFKALV   74 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v   74 (285)
                      |++.+.||+|+||.||++.     ..+++.||+|++........+.+.+|+++++.++||||+++++++...  ...++|
T Consensus        43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  122 (326)
T 2w1i_A           43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI  122 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred             ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence            6788999999999999997     346899999999877667778899999999999999999999988654  378899


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      ||++++++|.+++......++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.......
T Consensus       123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~  199 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  199 (326)
T ss_dssp             ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred             EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence            9999999999999877666999999999999999999999   9999999999999999999999999999998776543


Q ss_pred             ccc-eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccc--
Q 039392          155 IST-IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN--  231 (285)
Q Consensus       155 ~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  231 (285)
                      ... ......++..|+|||.+.+..++.++||||||+++++|++|..|+........   ...   ............  
T Consensus       200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~  273 (326)
T 2w1i_A          200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMI---GNDKQGQMIVFHLI  273 (326)
T ss_dssp             SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH---HHH---CTTCCTHHHHHHHH
T ss_pred             cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH---Hhh---ccccchhhhHHHHH
Confidence            221 12234567789999999888899999999999999999999998764311100   000   000000000000  


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ...........+..++.++.+++++||..||.+|||++++++.|+++++.+
T Consensus       274 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          274 ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            000000011123456788999999999999999999999999999999875


No 87 
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.9e-47  Score=319.68  Aligned_cols=257  Identities=24%  Similarity=0.391  Sum_probs=201.0

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcE----EEEEEeecc-chhHHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGME----VAVKVFNLQ-YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~----~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +|++.+.||+|+||+||+|.+ .+++.    |++|.+... .....+.+.+|+.+++.++||||+++++++.... .+++
T Consensus        16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v   94 (327)
T 3lzb_A           16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI   94 (327)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEE
T ss_pred             HceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEE
Confidence            478899999999999999974 34554    466666432 2345577889999999999999999999998765 7799


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      ++++.+++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++.......
T Consensus        95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence            9999999999999877667999999999999999999999   9999999999999999999999999999998775544


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      .........++..|+|||.+.+..++.++||||||+++|+|++ |..||......+....  .....             
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~--~~~~~-------------  236 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI--LEKGE-------------  236 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH--HHTTC-------------
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH--HHcCC-------------
Confidence            3333344556788999999999999999999999999999999 9999976443322111  10000             


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                           ....+..++.++.+++++||..||.+|||++++++.|+++.+.
T Consensus       237 -----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          237 -----RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             -----CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             -----CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence                 0111234566799999999999999999999999999998743


No 88 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.5e-47  Score=316.29  Aligned_cols=248  Identities=24%  Similarity=0.322  Sum_probs=195.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch--------------------------hHHHHHHHHHHHHccC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--------------------------RVFKSFDVECEMMKSI   53 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~--------------------------~~~~~~~~e~~~l~~l   53 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.....                          ...+.+.+|+++++.+
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            478899999999999999975 4689999999865431                          1235678999999999


Q ss_pred             CCCccccccceecc--CCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 039392           54 HHRNIIKVISSCSN--EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNV  131 (285)
Q Consensus        54 ~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~ni  131 (285)
                      +||||+++++++..  ....++|||++++++|.+++..  ..+++..++.++.|++.||.|||   ++|++|+||||+||
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNL  168 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGE
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHE
Confidence            99999999999876  5688999999999999886543  34899999999999999999999   99999999999999


Q ss_pred             eeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCCc---cCcchhhHHHHHHHHHHhhCCCCCcccccc
Q 039392          132 LLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGR---VSANGDVYSFGIMLIETFTRKKPTDEIFNG  208 (285)
Q Consensus       132 li~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~---~~~~~Di~slG~~l~~ll~g~~p~~~~~~~  208 (285)
                      +++.++.++|+|||++.......  .......+++.|+|||.+.+..   .+.++||||||+++|+|++|..||......
T Consensus       169 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  246 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM  246 (298)
T ss_dssp             EECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence            99999999999999998765432  1224457899999999987664   478899999999999999999999753221


Q ss_pred             chhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          209 EMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ... .........                  +.....++.++.+++.+||..||.+|||++|++++
T Consensus       247 ~~~-~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          247 CLH-SKIKSQALE------------------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHH-HHHHHCCCC------------------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHH-HHHhcccCC------------------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            111 111110000                  01122456679999999999999999999999864


No 89 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=9.6e-48  Score=321.30  Aligned_cols=256  Identities=24%  Similarity=0.378  Sum_probs=203.8

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcE----EEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGME----VAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~----~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +|++.+.||+|+||+||+|.+ .+++.    |++|.+.... ......+.+|+.+++.++||||+++++++. ....++|
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v   92 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV   92 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence            477889999999999999974 34554    7777765332 223345668999999999999999999986 4568899


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      +|++.+++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++.......
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            9999999999999876666899999999999999999999   9999999999999999999999999999998776544


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      .........++..|+|||.+.+..++.++||||||+++|+|++ |..||......+...... .. .             
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~-~-------------  234 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE-KG-E-------------  234 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH-TT-C-------------
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH-cC-C-------------
Confidence            3334445567788999999998899999999999999999999 999997644332211110 00 0             


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                           ....+..++.++.+++.+||..||.+|||++++++.|+.+..
T Consensus       235 -----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          235 -----RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             -----BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             -----CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                 000122345568899999999999999999999999998864


No 90 
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.7e-46  Score=312.49  Aligned_cols=264  Identities=26%  Similarity=0.385  Sum_probs=201.9

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccC--CCCccccccceeccC----CceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI--HHRNIIKVISSCSNE----EFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l--~h~~i~~~~~~~~~~----~~~~~v   74 (285)
                      +|++.+.||+|+||.||+|... ++.||+|++.....   .....|.+++...  +||||+++++++...    ...++|
T Consensus        38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  113 (337)
T 3mdy_A           38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI  113 (337)
T ss_dssp             HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred             ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence            3788999999999999999874 89999999864432   3344556665554  899999999998776    678999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCC--------CeeecCCCCCCeeeCCCCcEEEeeecc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA--------QVIHCDLKPSNVLLDDNMVAHLSDFGI  146 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~--------~~~h~di~~~nili~~~~~~~i~df~~  146 (285)
                      ||++++++|.+++...  .++...++.++.|++.||.|||   +.        |++|+||||+||+++.++.+||+|||+
T Consensus       114 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~  188 (337)
T 3mdy_A          114 TDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  188 (337)
T ss_dssp             ECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence            9999999999999665  3899999999999999999999   77        999999999999999999999999999


Q ss_pred             ceecCcccccc--eeccccccccccCCcccCCCccCcc------hhhHHHHHHHHHHhhC----------CCCCcccccc
Q 039392          147 AKLLTREDIST--IQTQTLATIGYMAPEYGKEGRVSAN------GDVYSFGIMLIETFTR----------KKPTDEIFNG  208 (285)
Q Consensus       147 ~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~------~Di~slG~~l~~ll~g----------~~p~~~~~~~  208 (285)
                      +..........  ......+++.|+|||.+.+...+..      +||||||+++|+|++|          ..||......
T Consensus       189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~  268 (337)
T 3mdy_A          189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS  268 (337)
T ss_dssp             CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence            97765432211  1234568999999999887766555      9999999999999999          5555443332


Q ss_pred             chhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          209 EMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ...............         .............+++++.+++.+||..||.+|||+++++++|+++.++.
T Consensus       269 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          269 DPSYEDMREIVCIKK---------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             SCCHHHHHHHHTTSC---------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             CCchhhhHHHHhhhc---------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            222222111111100         00011111223477889999999999999999999999999999998763


No 91 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=5.1e-47  Score=324.42  Aligned_cols=271  Identities=18%  Similarity=0.253  Sum_probs=205.3

Q ss_pred             CCCCCceeccc--CceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRG--GFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G--~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|  +||+||++... +++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  105 (389)
T 3gni_B           26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT  105 (389)
T ss_dssp             GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence            47889999999  99999999864 79999999997553  344567888999999999999999999999999999999


Q ss_pred             eccCCCCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           76 EYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        76 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      |++++++|.+++... ...+++..++.++.||+.||.|||   ++|++||||||+||+++.++.++|+|||.+.......
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~  182 (389)
T 3gni_B          106 SFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG  182 (389)
T ss_dssp             ECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred             EccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence            999999999998764 234899999999999999999999   9999999999999999999999999999986543221


Q ss_pred             c-----cceeccccccccccCCcccCC--CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC----
Q 039392          155 I-----STIQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS----  223 (285)
Q Consensus       155 ~-----~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~----  223 (285)
                      .     ........+++.|+|||++.+  ..++.++||||||+++|+|++|..||.+...................    
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  262 (389)
T 3gni_B          183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST  262 (389)
T ss_dssp             EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred             ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence            1     111223467888999999887  57999999999999999999999999775444333222111110000    


Q ss_pred             --ccccc-------------------cccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          224 --TKEIV-------------------DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       224 --~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .....                   .................+++++.+||++||..||.+|||++|++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence              00000                   0000000001112234567889999999999999999999999865


No 92 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=3.3e-47  Score=312.76  Aligned_cols=257  Identities=25%  Similarity=0.388  Sum_probs=212.7

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +|++.+.||+|+||.||+|.+. ++..||+|++... ....+.+.+|+++++.++||||+++++++......++|||+++
T Consensus        14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   92 (288)
T 3kfa_A           14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   92 (288)
T ss_dssp             GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCC
Confidence            4778899999999999999754 5889999998754 3345778899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           80 HGSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        80 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      +++|.+++... ...++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus        93 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~  168 (288)
T 3kfa_A           93 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTA  168 (288)
T ss_dssp             TEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-SEE
T ss_pred             CCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-ccc
Confidence            99999998764 344899999999999999999999   9999999999999999999999999999998765433 222


Q ss_pred             eccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      .....+++.|+|||.+.+..++.++||||||+++++|++ |..||........... . ....                 
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~-~-~~~~-----------------  229 (288)
T 3kfa_A          169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-L-EKDY-----------------  229 (288)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-H-HTTC-----------------
T ss_pred             ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-H-hccC-----------------
Confidence            334456778999999988899999999999999999999 9999876433222111 1 0000                 


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                       ....+..+++++.+++.+||..||.+|||++++++.|+++.++.
T Consensus       230 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          230 -RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence             00112345677999999999999999999999999999988754


No 93 
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-46  Score=309.57  Aligned_cols=260  Identities=23%  Similarity=0.383  Sum_probs=208.0

Q ss_pred             CCCCceecccCceEEEEEEeC-C---CcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCce-EEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLG-D---GMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFK-ALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~---~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~~v~   75 (285)
                      |...+.||+|+||+||+|... +   +..+|+|.+.... ....+.+.+|+.+++.++||||+++++++...+.. ++++
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            445689999999999999742 2   3378999986543 34557788999999999999999999999766555 8999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++.+++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++........
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            999999999999876667899999999999999999999   99999999999999999999999999999986654321


Q ss_pred             --cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          156 --STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       156 --~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                        ........+++.|+|||.+.+..++.++||||||+++|+|++|..|+................. .            
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-~------------  246 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-R------------  246 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC-C------------
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC-C------------
Confidence              1222345678889999999999999999999999999999996666543322222111111110 0            


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                            ...+..++.++.+++.+||..||.+|||++++++.|+++.+.+.
T Consensus       247 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          247 ------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             ------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence                  00123356679999999999999999999999999999998765


No 94 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=5.5e-47  Score=318.63  Aligned_cols=251  Identities=22%  Similarity=0.276  Sum_probs=201.5

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||+++.. +++.||+|++....   ....+.+.+|..+++++ +||||+++++++...+.+++||
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~   89 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI   89 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence            4788999999999999999854 68999999987542   34456678899999887 8999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++.+... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.++|+|||++....... 
T Consensus        90 e~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~-  164 (345)
T 3a8x_A           90 EYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-  164 (345)
T ss_dssp             CCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred             eCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence            99999999999876544 899999999999999999999   9999999999999999999999999999997543221 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchh----hhhhhhhhcCCCcccccccc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT----LKHWVNDWLPISTKEIVDPN  231 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  231 (285)
                       .......+|+.|+|||++.+..++.++|+||||+++|+|++|..||.........    ...........         
T Consensus       165 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~---------  234 (345)
T 3a8x_A          165 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK---------  234 (345)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC---------
T ss_pred             -CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC---------
Confidence             1224457899999999999999999999999999999999999999653221110    00000000000         


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCH------HHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINA------KEIVT  273 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~------~eil~  273 (285)
                             ....+...+.++.+++.+||..||.+||++      +++++
T Consensus       235 -------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          235 -------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             -------CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             -------CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence                   000123456779999999999999999996      56654


No 95 
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=6.7e-47  Score=315.11  Aligned_cols=258  Identities=22%  Similarity=0.283  Sum_probs=205.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceec----cCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS----NEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||++.. .+++.||+|++........+.+.+|+++++.++||||+++++++.    .....++|+
T Consensus        30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  109 (317)
T 2buj_A           30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL  109 (317)
T ss_dssp             EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence            378899999999999999985 579999999987766667788899999999999999999999986    345788999


Q ss_pred             eccCCCCHHHhhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           76 EYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        76 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      |++++++|.+++..   ....+++..++.++.|++.||.|||   +.|++|+||+|+||+++.++.++|+|||++.....
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  186 (317)
T 2buj_A          110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI  186 (317)
T ss_dssp             ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred             EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence            99999999998865   3455899999999999999999999   99999999999999999999999999999876543


Q ss_pred             cccc-------ceeccccccccccCCcccCCCc---cCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCC
Q 039392          153 EDIS-------TIQTQTLATIGYMAPEYGKEGR---VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPI  222 (285)
Q Consensus       153 ~~~~-------~~~~~~~~~~~~~~PE~~~~~~---~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~  222 (285)
                      ....       .......+++.|+|||.+.+..   ++.++||||||+++|+|++|..||.................   
T Consensus       187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---  263 (317)
T 2buj_A          187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ---  263 (317)
T ss_dssp             EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC---
T ss_pred             ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc---
Confidence            2111       0011234688999999987654   68999999999999999999999965322211111111100   


Q ss_pred             CccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHH
Q 039392          223 STKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIR  279 (285)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~  279 (285)
                                     ........++.++.+++.+||..||.+|||+++++++|+++.
T Consensus       264 ---------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          264 ---------------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             -----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             ---------------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence                           001112345677999999999999999999999999999875


No 96 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=5.7e-47  Score=310.34  Aligned_cols=256  Identities=23%  Similarity=0.375  Sum_probs=205.1

Q ss_pred             CCCCCceecccCceEEEEEEeC----CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG----DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||+||+|...    ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++... ..++||
T Consensus        13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~   91 (281)
T 3cc6_A           13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIM   91 (281)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEE
T ss_pred             ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEE
Confidence            4778899999999999999742    23469999987653 34557788999999999999999999998755 468999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++......++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++........
T Consensus        92 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  168 (281)
T 3cc6_A           92 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY  168 (281)
T ss_dssp             ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred             ecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence            999999999999876666999999999999999999999   99999999999999999999999999999987654321


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                       .......+++.|+|||.+.+..++.++||||||+++++|++ |..||........... .... ..             
T Consensus       169 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-~~~~-~~-------------  232 (281)
T 3cc6_A          169 -YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-LEKG-DR-------------  232 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HHHT-CC-------------
T ss_pred             -cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-HhcC-CC-------------
Confidence             12233456778999999988889999999999999999998 9999875433222111 1100 00             


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                           ...+..+++.+.+++.+||..||.+|||++++++.|+++.+.
T Consensus       233 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          233 -----LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence                 001233567799999999999999999999999999998764


No 97 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.1e-47  Score=315.83  Aligned_cols=250  Identities=22%  Similarity=0.345  Sum_probs=204.0

Q ss_pred             CCCCCceecccCceEEEEEEeC-CC-------cEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DG-------MEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~-------~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||+||+|... ++       ..||+|++........+.+.+|+++++.++||||+++++++...+..+
T Consensus         9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (289)
T 4fvq_A            9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI   88 (289)
T ss_dssp             GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCE
T ss_pred             HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCE
Confidence            4778899999999999999643 33       579999998776667788999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc--------EEEeee
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV--------AHLSDF  144 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~--------~~i~df  144 (285)
                      +|||++++++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.        ++|+||
T Consensus        89 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df  165 (289)
T 4fvq_A           89 LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP  165 (289)
T ss_dssp             EEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred             EEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeeccC
Confidence            999999999999999877666999999999999999999999   999999999999999988876        999999


Q ss_pred             ccceecCcccccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC
Q 039392          145 GIAKLLTREDISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      |++......      ....++..|+|||.+.+ ..++.++||||||+++|+|++|..|+............... .... 
T Consensus       166 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~-~~~~-  237 (289)
T 4fvq_A          166 GISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED-RHQL-  237 (289)
T ss_dssp             CSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCC-
T ss_pred             cccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc-cCCC-
Confidence            998655432      22346778999999887 67899999999999999999966554332222221111110 0000 


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                                         +...+.++.+++.+||+.||.+|||++++++.|+++..
T Consensus       238 -------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          238 -------------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             -------------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             -------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence                               11224458899999999999999999999999998764


No 98 
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.7e-46  Score=311.69  Aligned_cols=259  Identities=23%  Similarity=0.348  Sum_probs=199.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc---chhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ---YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  112 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE  112 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence            478889999999999999975 57899999998742   24455778899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           77 YMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        77 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      ++++++|.+++..   ....++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++......
T Consensus       113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~  189 (310)
T 2wqm_A          113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  189 (310)
T ss_dssp             CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred             cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence            9999999998864   3445899999999999999999999   999999999999999999999999999998766543


Q ss_pred             cccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      .  .......+++.|+|||.+.+..++.++||||||+++++|++|..||.....................          
T Consensus       190 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------  257 (310)
T 2wqm_A          190 T--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP----------  257 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCC----------
T ss_pred             C--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCC----------
Confidence            2  1123346788999999999989999999999999999999999998754322222111111100000          


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                             .....++.++.+++.+||..||.+|||++++++.|++++..
T Consensus       258 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          258 -------LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             -------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence                   00134566799999999999999999999999999999864


No 99 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=3.5e-47  Score=322.62  Aligned_cols=268  Identities=16%  Similarity=0.239  Sum_probs=206.8

Q ss_pred             CCCCCceecccCceEEEEEEeCC------CcEEEEEEeeccchhHH-----------HHHHHHHHHHccCCCCccccccc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGD------GMEVAVKVFNLQYGRVF-----------KSFDVECEMMKSIHHRNIIKVIS   63 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~------~~~~~iK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~~i~~~~~   63 (285)
                      +|++.+.||+|+||.||+|....      ++.||+|++........           .....|+..++.++|+||+++++
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~  115 (364)
T 3op5_A           36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG  115 (364)
T ss_dssp             EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred             eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence            37889999999999999997543      47899999875542211           12334666778889999999999


Q ss_pred             eeccC----CceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--CCC
Q 039392           64 SCSNE----EFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD--DNM  137 (285)
Q Consensus        64 ~~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~--~~~  137 (285)
                      ++...    ...++|||++ +++|.+++......++...++.++.||+.||.|||   ++|++||||||+||+++  .++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSCTT
T ss_pred             eeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCCCC
Confidence            98664    4589999999 88999999877667999999999999999999999   99999999999999998  889


Q ss_pred             cEEEeeeccceecCcccccce-----eccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhh
Q 039392          138 VAHLSDFGIAKLLTREDISTI-----QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTL  212 (285)
Q Consensus       138 ~~~i~df~~~~~~~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~  212 (285)
                      .++|+|||++...........     .....+|+.|+|||.+.+..++.++||||||+++|+|++|..||..........
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~  271 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV  271 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence            999999999987654322111     123448999999999999999999999999999999999999998643332221


Q ss_pred             hhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          213 KHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ......... ......+.         ......++.++.+++..||..+|.+|||++++++.|+++.++.
T Consensus       272 ~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          272 RDSKIRYRE-NIASLMDK---------CFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             HHHHHHHHH-CHHHHHHH---------HSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhhh-hHHHHHHH---------hcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence            111111000 00000000         0001345778999999999999999999999999999998765


No 100
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.2e-46  Score=312.13  Aligned_cols=254  Identities=29%  Similarity=0.414  Sum_probs=198.9

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +|++.+.||+|+||+||++... ++.||+|.+...  ...+.+.+|++++++++||||+++++++.+  ..++||||+++
T Consensus         9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~   83 (307)
T 2eva_A            9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG   83 (307)
T ss_dssp             GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred             HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence            3678899999999999999874 788999998643  345678899999999999999999998874  47899999999


Q ss_pred             CCHHHhhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc-EEEeeeccceecCcccccc
Q 039392           81 GSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV-AHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        81 ~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~-~~i~df~~~~~~~~~~~~~  157 (285)
                      ++|.+++.....  .++...++.++.|++.||.|||..+.+|++|+||||+||+++.++. +||+|||++......    
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----  159 (307)
T 2eva_A           84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----  159 (307)
T ss_dssp             CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred             CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----
Confidence            999999976543  3788899999999999999999322289999999999999998886 799999999765432    


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                       .....+++.|+|||.+.+..++.++||||||+++++|++|..||...................                
T Consensus       160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------------  222 (307)
T 2eva_A          160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR----------------  222 (307)
T ss_dssp             ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC----------------
T ss_pred             -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC----------------
Confidence             123458899999999999899999999999999999999999997543322211111110000                


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                        ......++..+.+++.+||..||.+|||++++++.|+++.+.+
T Consensus       223 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          223 --PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             --CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             --CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence              0012345667999999999999999999999999999987644


No 101
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=6.7e-47  Score=314.88  Aligned_cols=261  Identities=24%  Similarity=0.387  Sum_probs=212.6

Q ss_pred             CCCCCceecccCceEEEEEEe------CCCcEEEEEEeeccch-hHHHHHHHHHHHHccC-CCCccccccceeccCC-ce
Q 039392            1 GFSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSI-HHRNIIKVISSCSNEE-FK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~   71 (285)
                      +|++.+.||+|+||+||+|..      .+++.||+|++..... ...+.+.+|+.+++.+ +||||+++++++...+ ..
T Consensus        28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~  107 (316)
T 2xir_A           28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL  107 (316)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred             heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCce
Confidence            477889999999999999963      3568899999875433 3446788999999999 6999999999987654 58


Q ss_pred             EEEEeccCCCCHHHhhhcCCCc---------------cCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYI---------------LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN  136 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~---------------~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~  136 (285)
                      ++|||++++++|.+++......               ++...++.++.|++.||.|||   +.|++|+||||+||+++.+
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~  184 (316)
T 2xir_A          108 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEK  184 (316)
T ss_dssp             EEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGG
T ss_pred             EEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCC
Confidence            9999999999999999765432               789999999999999999999   9999999999999999999


Q ss_pred             CcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhh
Q 039392          137 MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHW  215 (285)
Q Consensus       137 ~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~  215 (285)
                      +.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||.............
T Consensus       185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~  264 (316)
T 2xir_A          185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL  264 (316)
T ss_dssp             GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred             CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence            9999999999987655443334445567889999999988899999999999999999998 999987654333222221


Q ss_pred             hhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          216 VNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                      .....                   ...+..+++++.+++.+||..||.+|||+++++++|+++.+...
T Consensus       265 ~~~~~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  313 (316)
T 2xir_A          265 KEGTR-------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA  313 (316)
T ss_dssp             HHTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             ccCcc-------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            11110                   00122346679999999999999999999999999999987653


No 102
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.7e-47  Score=333.23  Aligned_cols=253  Identities=25%  Similarity=0.437  Sum_probs=208.2

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCCC
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      |++.+.||+|+||+||+|...++..||||.+.... ...+.+.+|+++++.++||||+++++++. .+..++|||+++++
T Consensus       190 ~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g  267 (454)
T 1qcf_A          190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKG  267 (454)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred             eEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCC
Confidence            56778999999999999998888999999987543 34577889999999999999999999987 55788999999999


Q ss_pred             CHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           82 SLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        82 ~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      +|.+++.... ..++...++.++.||+.||.|||   +++++||||||+||+++.++.+||+|||++....... .....
T Consensus       268 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~~~~  343 (454)
T 1qcf_A          268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTARE  343 (454)
T ss_dssp             BHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HHTTC
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-eeccC
Confidence            9999997543 24888899999999999999999   9999999999999999999999999999998765422 11122


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...++..|+|||.+....++.++||||||+++|+|++ |..||.+....+.... ....                   .+
T Consensus       344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~-------------------~~  403 (454)
T 1qcf_A          344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LERG-------------------YR  403 (454)
T ss_dssp             SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHHT-------------------CC
T ss_pred             CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcC-------------------CC
Confidence            3445778999999988889999999999999999999 9999976433222111 1110                   01


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                      ...+..+++++.++|.+||..||.+|||++++++.|+++..
T Consensus       404 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          404 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            11134567789999999999999999999999999998753


No 103
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=5.1e-47  Score=319.32  Aligned_cols=244  Identities=20%  Similarity=0.242  Sum_probs=204.2

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||++... +|+.||+|++....   ....+.+.+|+.+++.++||||+++++++......++|||
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  121 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence            4778899999999999999854 78999999986543   2344667889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++.+... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.++|+|||++.......  
T Consensus       122 ~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~--  195 (350)
T 1rdq_E          122 YVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--  195 (350)
T ss_dssp             CCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred             CCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc--
Confidence            9999999999976544 899999999999999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                         ....+|+.|+|||++.+..++.++|+||||+++|+|++|..||......+. ..........               
T Consensus       196 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~---------------  256 (350)
T 1rdq_E          196 ---WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI-YEKIVSGKVR---------------  256 (350)
T ss_dssp             ---CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCC---------------
T ss_pred             ---ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH-HHHHHcCCCC---------------
Confidence               345689999999999999999999999999999999999999975432211 1111111000               


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCC-----HHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps-----~~eil~~  274 (285)
                           .+..++.++.++|.+||+.||.+||+     +++++++
T Consensus       257 -----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          257 -----FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             -----CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -----CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence                 12245677999999999999999998     8888764


No 104
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=7.3e-47  Score=314.86  Aligned_cols=267  Identities=24%  Similarity=0.323  Sum_probs=191.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch-hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG-RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|||++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   85 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM   85 (317)
T ss_dssp             -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred             ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence            589999999999999999975 4689999999875432 23356778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCC-----CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           79 PHGSLEKYLHSSN-----YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        79 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      ++ +|.+++....     ..++...++.++.||+.||.|||   ++|++|+||||+||+++.++.+||+|||++......
T Consensus        86 ~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           86 DN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             CC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred             CC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence            75 9998876432     34889999999999999999999   999999999999999999999999999999876533


Q ss_pred             cccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccc----
Q 039392          154 DISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV----  228 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----  228 (285)
                      .  .......+++.|+|||.+.+. .++.++||||||+++|+|++|..||.+....+. ...............+.    
T Consensus       162 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~  238 (317)
T 2pmi_A          162 V--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ-LKLIFDIMGTPNESLWPSVTK  238 (317)
T ss_dssp             C--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCTTTCGGGGG
T ss_pred             c--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhHhhhhhh
Confidence            2  122345678999999998764 689999999999999999999999976433221 11111111110000000    


Q ss_pred             ----cccccCccc------chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          229 ----DPNLLSRED------IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       229 ----~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                          .+.......      .........+.++.+|+.+||+.||.+|||+++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence                000000000      0011122456789999999999999999999999864


No 105
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2.6e-47  Score=317.69  Aligned_cols=271  Identities=24%  Similarity=0.399  Sum_probs=210.5

Q ss_pred             CCCCceecccCceEEEEEEe-----CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceecc--CCceEE
Q 039392            2 FSENNLIGRGGFGSVFKARL-----GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSN--EEFKAL   73 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-----~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~   73 (285)
                      |++++.||+|+||+||++..     .+++.||+|++.... ....+.+.+|+++++.++||||+++++++..  ....++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            37889999999999988752     368899999987654 3445678899999999999999999999976  467899


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |||++++++|.+++....  ++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++......
T Consensus       113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            999999999999997654  899999999999999999999   999999999999999999999999999999877653


Q ss_pred             ccc-ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhc-CCCcccccccc
Q 039392          154 DIS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWL-PISTKEIVDPN  231 (285)
Q Consensus       154 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  231 (285)
                      ... .......++..|+|||.+.+..++.++||||||+++++|++|..||............+..... .........  
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  265 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE--  265 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH--
T ss_pred             ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh--
Confidence            322 2223455778899999999889999999999999999999999998653221111000000000 000000000  


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                          .......+..++.++.+++++||..||.+|||++++++.|+++.+++-
T Consensus       266 ----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          266 ----RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             ----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ----cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence                001111234567789999999999999999999999999999988763


No 106
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1e-46  Score=328.39  Aligned_cols=246  Identities=26%  Similarity=0.376  Sum_probs=205.1

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|.+++.||+|+||.||+|... +|+.||+|++....   ......+.+|+.+++.++||||+++++++...+..++|||
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E   96 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME   96 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            4788999999999999999854 79999999987543   2234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++.... .+++..++.++.||+.||.|||   ++|++||||||+||+++.++.+||+|||++.......  
T Consensus        97 ~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~--  170 (476)
T 2y94_A           97 YVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--  170 (476)
T ss_dssp             CCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred             CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence            999999999997654 4999999999999999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       ......+++.|+|||.+.+..+ +.++||||||+++|+|++|..||........ .........               
T Consensus       171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~---------------  233 (476)
T 2y94_A          171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL-FKKICDGIF---------------  233 (476)
T ss_dssp             -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH-HHHHHTTCC---------------
T ss_pred             -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH-HHHHhcCCc---------------
Confidence             2234568999999999988765 7899999999999999999999976432221 111111100               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                           ..+..+++++.+++++||..||.+|||+++++++
T Consensus       234 -----~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          234 -----YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             -----CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence                 0122345679999999999999999999999974


No 107
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=5.7e-47  Score=316.72  Aligned_cols=247  Identities=22%  Similarity=0.315  Sum_probs=194.2

Q ss_pred             CCCCCceecccCceEEEEEEe----CCCcEEEEEEeeccc----hhHHHHHHHHHHHHccCCCCccccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL----GDGMEVAVKVFNLQY----GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~----~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||.||+++.    .+++.||+|++....    ......+.+|+.+++.++||||+++++++...+..+
T Consensus        18 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   97 (327)
T 3a62_A           18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLY   97 (327)
T ss_dssp             GEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred             HeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEE
Confidence            478889999999999999975    478999999987542    233456778999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      +|||++++++|.+++..... ++...++.++.||+.||.|||   ++|++|+||||+||+++.+|.++|+|||++.....
T Consensus        98 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~  173 (327)
T 3a62_A           98 LILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH  173 (327)
T ss_dssp             EEEECCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred             EEEeCCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence            99999999999999876543 889999999999999999999   99999999999999999999999999999875433


Q ss_pred             ccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          153 EDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      ..  .......+++.|+|||.+.+..++.++||||||+++|+|++|..||........ .........            
T Consensus       174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~------------  238 (327)
T 3a62_A          174 DG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-IDKILKCKL------------  238 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCC------------
T ss_pred             CC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCC------------
Confidence            21  122345689999999999988999999999999999999999999976432221 111111100            


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCC-----CHHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK  274 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----s~~eil~~  274 (285)
                              ..+...+.++.+++.+||..||.+||     ++++++++
T Consensus       239 --------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          239 --------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             --------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             --------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence                    01223567799999999999999999     78888764


No 108
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.6e-47  Score=321.56  Aligned_cols=246  Identities=23%  Similarity=0.321  Sum_probs=201.3

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||+|+. .+++.||+|++....   ....+.+..|..++..+ +||||+++++++...+.+++||
T Consensus        18 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~   97 (345)
T 1xjd_A           18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM   97 (345)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence            578899999999999999985 468999999987542   23345677888888876 8999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      ||+++++|.+++.+... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.++|+|||++....... 
T Consensus        98 E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-  172 (345)
T 1xjd_A           98 EYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-  172 (345)
T ss_dssp             ECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred             eCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence            99999999999976544 899999999999999999999   9999999999999999999999999999997543221 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       .......+|+.|+|||++.+..++.++|+||||+++|+|++|..||......+. .........               
T Consensus       173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~---------------  235 (345)
T 1xjd_A          173 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMDNP---------------  235 (345)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC---------------
T ss_pred             -CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHHhCCC---------------
Confidence             122456789999999999999999999999999999999999999976432211 111111000               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHH-HHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAK-EIVT  273 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~-eil~  273 (285)
                           ..+..++.++.+++.+||..||.+||++. ++++
T Consensus       236 -----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          236 -----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             -----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             -----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence                 00123567799999999999999999997 6653


No 109
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=8.8e-47  Score=308.56  Aligned_cols=248  Identities=25%  Similarity=0.301  Sum_probs=204.9

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++......++|||++++
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (277)
T 3f3z_A           11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG   90 (277)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCC
Confidence            778899999999999999754 5788999998876555667888999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCcEEEeeeccceecCcccccc
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili---~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      ++|.+++..... +++..++.++.|++.||.+||   ++|++|+||+|+||++   +.++.++|+|||++.......   
T Consensus        91 ~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~---  163 (277)
T 3f3z_A           91 GELFERVVHKRV-FRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---  163 (277)
T ss_dssp             CBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS---
T ss_pred             CcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc---
Confidence            999998876544 899999999999999999999   9999999999999999   788999999999998765432   


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      ......+++.|+|||.+.+. ++.++||||||+++++|++|..||......+.... ........               
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~---------------  226 (277)
T 3f3z_A          164 MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK-IREGTFTF---------------  226 (277)
T ss_dssp             CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHCCCCC---------------
T ss_pred             chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHH-HHhCCCCC---------------
Confidence            22345688999999988654 89999999999999999999999976433221111 11110000               


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                       .......+++++.+++.+||+.||.+|||+.+++++
T Consensus       227 -~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          227 -PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             -CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             -CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             001122457789999999999999999999999864


No 110
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.1e-47  Score=321.49  Aligned_cols=259  Identities=26%  Similarity=0.465  Sum_probs=198.5

Q ss_pred             CCCCceecccCceEEEEEEe--CCC--cEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceec-cCCceEEEE
Q 039392            2 FSENNLIGRGGFGSVFKARL--GDG--MEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCS-NEEFKALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~--~~~--~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~~v~   75 (285)
                      |++.+.||+|+||+||+|..  .++  ..||+|.+.... ....+.+.+|+.++++++||||+++++++. ..+..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            45678999999999999974  232  457999886433 345677889999999999999999999864 456788999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.+||+|||++........
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            999999999999877666899999999999999999999   99999999999999999999999999999986644321


Q ss_pred             c--ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          156 S--TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       156 ~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .  .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+.... .....             
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~-~~~~~-------------  313 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-LLQGR-------------  313 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH-HHTTC-------------
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH-HHcCC-------------
Confidence            1  11223456778999999998899999999999999999999 6677765433222111 11000             


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                            ....+..++..+.+++.+||..||.+|||++++++.|+++..++.
T Consensus       314 ------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          314 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence                  001123456779999999999999999999999999999988764


No 111
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=9.1e-47  Score=308.79  Aligned_cols=256  Identities=25%  Similarity=0.437  Sum_probs=209.1

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|+++++.++||||+++++++.. +..++|||++++
T Consensus        14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~   91 (279)
T 1qpc_A           14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMEN   91 (279)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred             hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCC
Confidence            3678899999999999999988888999999875432 34678899999999999999999999874 458899999999


Q ss_pred             CCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           81 GSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        81 ~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      ++|.+++.... ..++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++....... ....
T Consensus        92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~  167 (279)
T 1qpc_A           92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAR  167 (279)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EECC
T ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cccc
Confidence            99999987543 24889999999999999999999   9999999999999999999999999999998765432 1122


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccc
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI  238 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                      ....++..|+|||.+.+..++.++||||||+++++|++ |..||......+.. .......                   
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~~~~-------------------  227 (279)
T 1qpc_A          168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI-QNLERGY-------------------  227 (279)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-HHHHTTC-------------------
T ss_pred             cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH-HHHhccc-------------------
Confidence            33456778999999988889999999999999999999 89998764332211 1111100                   


Q ss_pred             hhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ....+..++.++.+++.+||..||.+|||++++++.|+++....
T Consensus       228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            00112345677999999999999999999999999999988653


No 112
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=3e-47  Score=320.58  Aligned_cols=249  Identities=24%  Similarity=0.394  Sum_probs=195.7

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCC--CccccccceeccCCceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHH--RNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      |++.+.||+|+||.||++...+++.||+|++....  ....+.+.+|+.+++.++|  +||+++++++......++|||+
T Consensus        11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~   90 (343)
T 3dbq_A           11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC   90 (343)
T ss_dssp             EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC
Confidence            78899999999999999988889999999987543  3445778899999999976  9999999999999999999995


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                       .+++|.+++.... .++...++.++.|++.||.|||   ++|++||||||+||+++ ++.++|+|||++..........
T Consensus        91 -~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  164 (343)
T 3dbq_A           91 -GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  164 (343)
T ss_dssp             -CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred             -CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence             4779999997754 4899999999999999999999   99999999999999997 6789999999998775543333


Q ss_pred             eeccccccccccCCcccCC-----------CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccc
Q 039392          158 IQTQTLATIGYMAPEYGKE-----------GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE  226 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~-----------~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                      ......+|+.|+|||.+.+           ..++.++||||||+++|+|++|..||....................    
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~----  240 (343)
T 3dbq_A          165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI----  240 (343)
T ss_dssp             -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC----
T ss_pred             cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc----
Confidence            3345678999999998754           6789999999999999999999999976433222222111111100    


Q ss_pred             cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          227 IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                    ..+...+.++.+++.+||..||.+|||+++++++
T Consensus       241 --------------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          241 --------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             --------------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --------------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence                          0012234568899999999999999999999876


No 113
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1.7e-46  Score=307.92  Aligned_cols=250  Identities=21%  Similarity=0.337  Sum_probs=204.8

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..+++||+
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   86 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL   86 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence            588899999999999999975 468999999987543  34456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc---EEEeeeccceecCccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV---AHLSDFGIAKLLTRED  154 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~---~~i~df~~~~~~~~~~  154 (285)
                      +++++|.+.+..... ++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.   ++|+|||++.......
T Consensus        87 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (284)
T 3kk8_A           87 VTGGELFEDIVAREF-YSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  162 (284)
T ss_dssp             CCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred             CCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence            999999888866543 899999999999999999999   999999999999999986655   9999999998765432


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                         ......+++.|+|||.+.+..++.++||||||+++++|++|..||........... .........           
T Consensus       163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~-----------  227 (284)
T 3kk8_A          163 ---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ-IKAGAYDYP-----------  227 (284)
T ss_dssp             ---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHTCCCCC-----------
T ss_pred             ---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHH-HHhccccCC-----------
Confidence               22345689999999999999999999999999999999999999965432221111 111111000           


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                           ......+++++.+++.+||..||.+|||+++++++
T Consensus       228 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          228 -----SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             -----TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             -----chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence                 00123456779999999999999999999999874


No 114
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=7e-48  Score=330.18  Aligned_cols=251  Identities=22%  Similarity=0.268  Sum_probs=203.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+|+.. +++.||+|++....   ....+.+.+|..+++.++||||+++++++.+...+++|||
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E  149 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME  149 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            4778899999999999999754 68899999986532   1222447789999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |++|++|.+++...  .+++..++.++.||+.||.|||   ++|++||||||+||+++.+|.+||+|||++....... .
T Consensus       150 ~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~-~  223 (410)
T 3v8s_A          150 YMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-M  223 (410)
T ss_dssp             CCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-E
T ss_pred             CCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC-c
Confidence            99999999998754  3899999999999999999999   9999999999999999999999999999998765432 1


Q ss_pred             ceeccccccccccCCcccCCCc----cCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGR----VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~----~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .......+|+.|+|||++.+..    ++.++|+||||+++|+|++|..||.+...... .........            
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~~------------  290 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YSKIMNHKN------------  290 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHH------------
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-HHHHHhccc------------
Confidence            2234567999999999987665    88999999999999999999999976432221 111111100            


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCC--CCCHHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQ--RINAKEIVTK  274 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~--Rps~~eil~~  274 (285)
                          ...++....++.++.+||.+||..+|.+  ||+++|++++
T Consensus       291 ----~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          291 ----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             ----HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ----cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence                0011112245677999999999999988  9999999875


No 115
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1e-46  Score=314.59  Aligned_cols=249  Identities=21%  Similarity=0.307  Sum_probs=205.1

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchh------HHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGR------VFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      |++.+.||+|+||.||++... +|+.||+|++......      ..+.+.+|+.+++.++||||+++++++......++|
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (321)
T 2a2a_A           14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI   93 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence            788999999999999999754 6899999998754321      356788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----cEEEeeeccceec
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLL  150 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~----~~~i~df~~~~~~  150 (285)
                      ||++++++|.+++.... .++...++.++.|++.||.|||   +.|++|+||+|+||+++.++    .++|+|||++...
T Consensus        94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~  169 (321)
T 2a2a_A           94 LELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI  169 (321)
T ss_dssp             ECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred             EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence            99999999999997654 4899999999999999999999   99999999999999999887    7999999999876


Q ss_pred             CcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          151 TREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      ....   ......+++.|+|||.+.+..++.++||||||+++|+|++|..||......+. ..........         
T Consensus       170 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~---------  236 (321)
T 2a2a_A          170 EDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LANITSVSYD---------  236 (321)
T ss_dssp             CTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCC---------
T ss_pred             Cccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhcccc---------
Confidence            5432   12345688999999999988999999999999999999999999975332211 1111110000         


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                             .........+..+.+++.+||..||.+|||+++++++
T Consensus       237 -------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          237 -------FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             -------CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             -------cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                   0011123456779999999999999999999999874


No 116
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.2e-46  Score=308.00  Aligned_cols=248  Identities=23%  Similarity=0.387  Sum_probs=185.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch---hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.....   ...+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE   91 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence            478899999999999999975 5799999999865432   234678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++......++...++.++.|++.||.|||   ++|++|+||+|+||+++.++.++|+|||++.........
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  168 (278)
T 3cok_A           92 MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK  168 (278)
T ss_dssp             CCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred             cCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc
Confidence            99999999999876666999999999999999999999   999999999999999999999999999999876533211


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                        .....+++.|+|||.+.+..++.++||||||+++++|++|..||...........             .    ...  
T Consensus       169 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-------------~----~~~--  227 (278)
T 3cok_A          169 --HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK-------------V----VLA--  227 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------C----CSS--
T ss_pred             --ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH-------------H----hhc--
Confidence              1234678899999999988899999999999999999999999875322111000             0    000  


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        ....+...+.++.+++.+||..||.+|||+++++++
T Consensus       228 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          228 --DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             --ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence              001123456779999999999999999999999863


No 117
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.2e-47  Score=323.69  Aligned_cols=274  Identities=20%  Similarity=0.274  Sum_probs=212.3

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCC--ceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE--FKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e~   77 (285)
                      |++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++....  ..++|||+
T Consensus        11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~   90 (396)
T 4eut_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF   90 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred             eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence            788999999999999999864 58999999987543 233466778999999999999999999987654  77999999


Q ss_pred             cCCCCHHHhhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCcEEEeeeccceecC
Q 039392           78 MPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili----~~~~~~~i~df~~~~~~~  151 (285)
                      +++++|.+++.....  .+++..++.++.|++.||+|||   ++|++|+||||+||++    +.++.+||+|||++....
T Consensus        91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            999999999976432  2899999999999999999999   9999999999999999    788889999999998765


Q ss_pred             cccccceeccccccccccCCcccCC--------CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhh---hhhc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKE--------GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWV---NDWL  220 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~--------~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~---~~~~  220 (285)
                      ...   ......+++.|+|||.+.+        ..++.++||||||+++|+|++|..||..............   ...+
T Consensus       168 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p  244 (396)
T 4eut_A          168 DDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP  244 (396)
T ss_dssp             CGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred             CCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence            532   2234568999999998764        4678899999999999999999999976443332222221   1111


Q ss_pred             CCCccccccccc-----cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          221 PISTKEIVDPNL-----LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       221 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      ............     ....+.........+..+.+++++||..||++|||++++++.++++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            111100000000     0001111223467788899999999999999999999999999988764


No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=7.8e-47  Score=318.53  Aligned_cols=248  Identities=20%  Similarity=0.281  Sum_probs=189.8

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |++.+.||+|+||.||+|... +++.||+|++....  ..+.+.+|++++++++||||+++++++......++|||++++
T Consensus        55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  132 (349)
T 2w4o_A           55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG  132 (349)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence            778899999999999999864 68899999987543  235677899999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCcEEEeeeccceecCcccccc
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~---~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      ++|.+++.... .+++..++.++.|++.||.|||   +.|++|+||||+||+++.   ++.++|+|||++.......   
T Consensus       133 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---  205 (349)
T 2w4o_A          133 GELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---  205 (349)
T ss_dssp             CBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc---
Confidence            99999987654 3899999999999999999999   999999999999999975   8999999999998665422   


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      ......+++.|+|||.+.+..++.++||||||+++|+|++|..||.....................              
T Consensus       206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~--------------  271 (349)
T 2w4o_A          206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI--------------  271 (349)
T ss_dssp             -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCC--------------
T ss_pred             ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccC--------------
Confidence            123456899999999999989999999999999999999999999764433322222211111000              


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        ......++.++.+++++||..||.+|||+++++++
T Consensus       272 --~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          272 --SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             --TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             --CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              00123456779999999999999999999999874


No 119
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=5.9e-47  Score=319.02  Aligned_cols=247  Identities=19%  Similarity=0.256  Sum_probs=202.7

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||+||+|+.. +++.||+|++....   ....+.+..|..++..+ +||+|+++++++...+.+++||
T Consensus        21 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~  100 (353)
T 2i0e_A           21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM  100 (353)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence            5788999999999999999864 58899999987542   23446677899999888 7999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      ||++|++|.+++.+... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.++|+|||++....... 
T Consensus       101 E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-  175 (353)
T 2i0e_A          101 EYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-  175 (353)
T ss_dssp             ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred             eCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC-
Confidence            99999999999976544 899999999999999999999   9999999999999999999999999999997543221 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       .......+|+.|+|||++.+..++.++|+||||+++|+|++|..||......+. .........               
T Consensus       176 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~i~~~~~---------------  238 (353)
T 2i0e_A          176 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEHNV---------------  238 (353)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC---------------
T ss_pred             -cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH-HHHHHhCCC---------------
Confidence             122445789999999999999999999999999999999999999976432211 111111100               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCC-----HHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRIN-----AKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps-----~~eil~~  274 (285)
                           ..+...+.++.+++.+||..||.+||+     +++++++
T Consensus       239 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          239 -----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             -----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence                 012245677999999999999999995     5777654


No 120
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=9.5e-47  Score=316.29  Aligned_cols=260  Identities=23%  Similarity=0.372  Sum_probs=211.0

Q ss_pred             CCCCCceecccCceEEEEEEeC-CC-----cEEEEEEeeccc-hhHHHHHHHHHHHHccC-CCCccccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DG-----MEVAVKVFNLQY-GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~-----~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||.||+|... ++     ..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++...+..+
T Consensus        47 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  126 (333)
T 2i1m_A           47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL  126 (333)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceE
Confidence            4677899999999999999753 22     479999987543 33456788999999999 8999999999999999999


Q ss_pred             EEEeccCCCCHHHhhhcC-------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcE
Q 039392           73 LVLEYMPHGSLEKYLHSS-------------NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVA  139 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~  139 (285)
                      +|||++++++|.+++...             ...++...++.++.|++.||.|||   +.|++|+||+|+||+++.++.+
T Consensus       127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~  203 (333)
T 2i1m_A          127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVA  203 (333)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGGEE
T ss_pred             EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCCeE
Confidence            999999999999998653             234789999999999999999999   9999999999999999999999


Q ss_pred             EEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhh
Q 039392          140 HLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVND  218 (285)
Q Consensus       140 ~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~  218 (285)
                      +|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||................
T Consensus       204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  283 (333)
T 2i1m_A          204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG  283 (333)
T ss_dssp             EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHT
T ss_pred             EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcC
Confidence            9999999987654433333344556788999999988889999999999999999998 889987644332222111111


Q ss_pred             hcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          219 WLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      . ..                  ..+..++.++.+++.+||..||.+|||++++++.|+++..+.
T Consensus       284 ~-~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  328 (333)
T 2i1m_A          284 Y-QM------------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED  328 (333)
T ss_dssp             C-CC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             C-CC------------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence            0 00                  012234567899999999999999999999999999988654


No 121
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.4e-47  Score=318.46  Aligned_cols=257  Identities=25%  Similarity=0.395  Sum_probs=196.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCc----eE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEF----KA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~   72 (285)
                      .|++.+.||+|+||.||++.. .+++.||+|++....   ......+.+|+++++.++||||+++++++.....    .+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            478899999999999999985 578999999987542   3445678899999999999999999999866543    48


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      +|||++++++|.+++.... .++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++.....
T Consensus        93 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  168 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD  168 (311)
T ss_dssp             EEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred             EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence            9999999999999997654 3899999999999999999999   99999999999999999999999999999987654


Q ss_pred             cccc-ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccc
Q 039392          153 EDIS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN  231 (285)
Q Consensus       153 ~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                      .... .......+++.|+|||.+.+..++.++||||||+++|+|++|..||................             
T Consensus       169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-------------  235 (311)
T 3ork_A          169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED-------------  235 (311)
T ss_dssp             -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC-------------
T ss_pred             cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC-------------
Confidence            3211 12233568999999999999999999999999999999999999997643322221111100             


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHH-HHHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV-TKLVKI  278 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil-~~l~~l  278 (285)
                          ..........++.++.+++.+||+.||.+||++.+++ ..+.++
T Consensus       236 ----~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          236 ----PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             ----CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ----CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence                0001111234677899999999999999999655544 455444


No 122
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=4.8e-47  Score=316.64  Aligned_cols=257  Identities=22%  Similarity=0.393  Sum_probs=208.5

Q ss_pred             CCCCCceecccCceEEEEEEeC------CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG------DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|++.+.||+|+||.||+|...      +++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  105 (322)
T 1p4o_A           26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV  105 (322)
T ss_dssp             GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred             heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence            3678899999999999999643      47889999987543 3344668899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCC---------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeee
Q 039392           74 VLEYMPHGSLEKYLHSSN---------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDF  144 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df  144 (285)
                      |||++++++|.+++....         ..++...++.++.|++.||.+||   ++|++|+||||+||+++.++.++|+||
T Consensus       106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~Df  182 (322)
T 1p4o_A          106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF  182 (322)
T ss_dssp             EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCT
T ss_pred             EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEECcC
Confidence            999999999999986532         23688999999999999999999   999999999999999999999999999


Q ss_pred             ccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCC
Q 039392          145 GIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      |++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+.... ......   
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~~~---  258 (322)
T 1p4o_A          183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-VMEGGL---  258 (322)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHH-HHTTCC---
T ss_pred             ccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHH-HHcCCc---
Confidence            99986654332233334456788999999988889999999999999999999 8889876432221111 110000   


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                                      ...+..++.++.+++.+||..||.+|||++++++.|+++..
T Consensus       259 ----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          259 ----------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             ----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ----------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence                            00123456779999999999999999999999999987653


No 123
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=9.8e-47  Score=322.32  Aligned_cols=249  Identities=24%  Similarity=0.391  Sum_probs=196.7

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCC--CCccccccceeccCCceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIH--HRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      |++.+.||+|+||.||++...+++.||||++....  ....+.+.+|+.+++.+.  ||||+++++++...+.+++||| 
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-  136 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-  136 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred             eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence            78899999999999999988779999999986543  345577889999999996  5999999999999999999999 


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +.+++|.+++.... .++...++.++.||+.||.|||   +.|++||||||+||+++ ++.+||+|||++..........
T Consensus       137 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          137 CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence            55779999997765 4888899999999999999999   99999999999999995 5899999999998765443333


Q ss_pred             eeccccccccccCCcccCC-----------CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccc
Q 039392          158 IQTQTLATIGYMAPEYGKE-----------GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE  226 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~-----------~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                      ......+|+.|+|||++.+           ..++.++||||||+++|+|++|..||.....................   
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~---  288 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE---  288 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC---
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC---
Confidence            3345678999999998765           36889999999999999999999999764332222221111111000   


Q ss_pred             cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          227 IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                     .+...+.++.+++.+||..||.+|||+++++++
T Consensus       289 ---------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          289 ---------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             ---------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ---------------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence                           011224568899999999999999999999865


No 124
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-46  Score=314.15  Aligned_cols=257  Identities=27%  Similarity=0.473  Sum_probs=202.6

Q ss_pred             CCCCceecccCceEEEEEEeCC-----CcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLGD-----GMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~-----~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      |++.+.||+|+||.||+|....     +..||+|.+.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus        46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  125 (333)
T 1mqb_A           46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT  125 (333)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence            5667899999999999996432     3469999987543 334567889999999999999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++......++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++........
T Consensus       126 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  202 (333)
T 1mqb_A          126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  202 (333)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence            999999999999876666999999999999999999999   99999999999999999999999999999987654321


Q ss_pred             c-ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          156 S-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       156 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      . .......++..|+|||.+.+..++.++||||||+++++|++ |..||......+. ........              
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~-~~~~~~~~--------------  267 (333)
T 1mqb_A          203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-MKAINDGF--------------  267 (333)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHHHTTC--------------
T ss_pred             cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH-HHHHHCCC--------------
Confidence            1 11223345778999999988899999999999999999999 9999865432211 11111100              


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                           ....+..++.++.+++.+||..||.+|||++++++.|+++.+.
T Consensus       268 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          268 -----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             -----CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                 0011234567799999999999999999999999999998754


No 125
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.3e-46  Score=312.39  Aligned_cols=258  Identities=22%  Similarity=0.279  Sum_probs=200.5

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||++... +++.||+|++....   ....+.+.+|+.+++.++||||+++++++...+..++++|
T Consensus        35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 2h34_A           35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR  114 (309)
T ss_dssp             CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence            5888999999999999999854 78999999987542   3345778899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++.... .++...++.++.|++.||.|||   +.|++|+||+|+||+++.++.++|+|||++........ 
T Consensus       115 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-  189 (309)
T 2h34_A          115 LINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL-  189 (309)
T ss_dssp             CCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred             ecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc-
Confidence            999999999997654 3899999999999999999999   99999999999999999999999999999876654321 


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .......+++.|+|||.+.+..++.++||||||+++|+|++|..||......  ...........               
T Consensus       190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~---------------  252 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIP---------------  252 (309)
T ss_dssp             -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCC---------------
T ss_pred             ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCC---------------
Confidence            1223456889999999999989999999999999999999999999764322  11111110000               


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCC-CHHHHHHHHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRI-NAKEIVTKLVKIRDS  281 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-s~~eil~~l~~l~~~  281 (285)
                       ........++.++.+++.+||..||.+|| |++++++.|+++..+
T Consensus       253 -~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          253 -RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             -CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             -CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence             00011335567799999999999999999 999999999887543


No 126
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=8e-47  Score=319.76  Aligned_cols=251  Identities=23%  Similarity=0.249  Sum_probs=192.9

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      .|++.+.||+|+||+||+++.. +++.||+|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   99 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS   99 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence            4788999999999999999864 789999999875432 23567789999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc--EEEeeeccceecCcccccc
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV--AHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~--~~i~df~~~~~~~~~~~~~  157 (285)
                      +++|.+++..... ++...++.++.|++.||.|||   ++|++||||||+||+++.++.  +||+|||++......   .
T Consensus       100 ~~~L~~~l~~~~~-~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~---~  172 (361)
T 3uc3_A          100 GGELYERICNAGR-FSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---S  172 (361)
T ss_dssp             SCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred             CCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc---C
Confidence            9999999876544 999999999999999999999   999999999999999987665  999999998743322   1


Q ss_pred             eeccccccccccCCcccCCCccCcc-hhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSAN-GDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~-~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      ......+++.|+|||.+.+..++.+ +||||||+++|+|++|..||................. ....            
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~-~~~~------------  239 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL-SVKY------------  239 (361)
T ss_dssp             --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH-TTCC------------
T ss_pred             CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh-cCCC------------
Confidence            2234568999999999888776555 8999999999999999999976544332222111110 0000            


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .+.....+++++.+|+.+||..||.+|||+++++++
T Consensus       240 --~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          240 --SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             --CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             --CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence              001122346778999999999999999999999976


No 127
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=2.9e-47  Score=328.73  Aligned_cols=254  Identities=19%  Similarity=0.248  Sum_probs=204.5

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccch---hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+|+.. +++.||+|++.....   ...+.+.+|..++..++||||+++++++.+.+.+++|||
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~E  154 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD  154 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred             heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEe
Confidence            4778899999999999999864 588999999875321   222347889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |+++++|.+++.+....+++..++.++.||+.||.|||   +.|++||||||+||+++.+|.+||+|||++....... .
T Consensus       155 y~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~-~  230 (437)
T 4aw2_A          155 YYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-T  230 (437)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-C
T ss_pred             cCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC-C
Confidence            99999999999875556999999999999999999999   9999999999999999999999999999997765432 2


Q ss_pred             ceeccccccccccCCcccC-----CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccc
Q 039392          157 TIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN  231 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~-----~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                      .......+|+.|+|||++.     ...++.++|+||||+++|+|++|..||.+....+.. ...........        
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~-~~i~~~~~~~~--------  301 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY-GKIMNHKERFQ--------  301 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHTHHHHCC--------
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHH-Hhhhhcccccc--------
Confidence            2223457899999999886     567899999999999999999999999764332221 11111000000        


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCC--CCCHHHHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQ--RINAKEIVTK  274 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~--Rps~~eil~~  274 (285)
                       .+..      ...+++++.+||++||+.+|++  ||+++|++++
T Consensus       302 -~p~~------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          302 -FPTQ------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             -CCSS------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             -CCcc------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence             0000      1235677999999999998988  9999999864


No 128
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.6e-47  Score=316.06  Aligned_cols=267  Identities=20%  Similarity=0.255  Sum_probs=199.3

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhH-HHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRV-FKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||+|... +++.||+|++....... ...+.+|+++++.++||||+++++++...+..++|||++
T Consensus         3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (324)
T 3mtl_A            3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL   82 (324)
T ss_dssp             SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccc
Confidence            5889999999999999999864 78999999987544322 124457999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      ++ +|.+++......++...++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++.......  ..
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~  156 (324)
T 3mtl_A           83 DK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KT  156 (324)
T ss_dssp             SE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--cc
Confidence            75 899988877767999999999999999999999   9999999999999999999999999999998654332  22


Q ss_pred             eccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc---c----
Q 039392          159 QTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD---P----  230 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----  230 (285)
                      .....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||.+....+. ...............+..   .    
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ-LHFIFRILGTPTEETWPGILSNEEFK  235 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHhchhhhcchhhc
Confidence            234567899999998876 5689999999999999999999999976433222 222211111111100000   0    


Q ss_pred             -ccc--CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 -NLL--SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 -~~~--~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                       ...  ............+++++.+|+.+||+.||.+|||++|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence             000  00001112233567889999999999999999999999873


No 129
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.1e-46  Score=307.78  Aligned_cols=245  Identities=23%  Similarity=0.364  Sum_probs=181.4

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++....   ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus        14 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   93 (275)
T 2eue_A           14 NYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEeh
Confidence            689999999999999999974 578999999986542   2335678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++ ++++.+.+..... +++..++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        94 ~~-~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--  166 (275)
T 2eue_A           94 YA-GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--  166 (275)
T ss_dssp             CC-CEEHHHHHHTSSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred             hc-CCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc--
Confidence            99 6688888766544 899999999999999999999   9999999999999999999999999999997655432  


Q ss_pred             ceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       ......+++.|+|||.+.+..+ +.++||||||+++++|++|..||......... .........              
T Consensus       167 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~--------------  230 (275)
T 2eue_A          167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF-KNISNGVYT--------------  230 (275)
T ss_dssp             ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHTCCC--------------
T ss_pred             -cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCC--------------
Confidence             1234468899999999887765 78999999999999999999999764322111 111110000              


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                            .+...++++.+++++||+.||.+|||++|++++
T Consensus       231 ------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  263 (275)
T 2eue_A          231 ------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             ------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             ------CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence                  122356678999999999999999999999864


No 130
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=8.6e-47  Score=331.89  Aligned_cols=253  Identities=25%  Similarity=0.411  Sum_probs=209.6

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |++.+.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.++++++||||+++++++......++|||++++
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~  300 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY  300 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence            567789999999999999865 488999999875433 357788999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           81 GSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        81 ~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      ++|.+++... ...++...++.++.||+.||.|||   +++++||||||+||+++.++.+||+|||++....... ....
T Consensus       301 g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~  376 (495)
T 1opk_A          301 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAH  376 (495)
T ss_dssp             CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-EECC
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-eeec
Confidence            9999999764 345889999999999999999999   9999999999999999999999999999998765432 2222


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccc
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI  238 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                      ....++..|+|||.+.+..++.++||||||+++|+|++ |..||......+.. . ....                  ..
T Consensus       377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~-~-~~~~------------------~~  436 (495)
T 1opk_A          377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-E-LLEK------------------DY  436 (495)
T ss_dssp             TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-H-HHHT------------------TC
T ss_pred             CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH-H-HHHc------------------CC
Confidence            33445678999999988899999999999999999999 99998764432211 1 1110                  00


Q ss_pred             hhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHH
Q 039392          239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIR  279 (285)
Q Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~  279 (285)
                      +...+..++.++.++|.+||+.||.+|||++++++.|+.+.
T Consensus       437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            11123456778999999999999999999999999998764


No 131
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=3.5e-46  Score=312.49  Aligned_cols=249  Identities=23%  Similarity=0.354  Sum_probs=196.6

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCC---------
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE---------   69 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---------   69 (285)
                      +|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+..         
T Consensus         7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~   86 (332)
T 3qd2_B            7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD   86 (332)
T ss_dssp             HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred             cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence            4788999999999999999865 79999999987544 335577889999999999999999999875432         


Q ss_pred             ------------------------------------------------ceEEEEeccCCCCHHHhhhcCCC--ccCHHHH
Q 039392           70 ------------------------------------------------FKALVLEYMPHGSLEKYLHSSNY--ILDIYQR   99 (285)
Q Consensus        70 ------------------------------------------------~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~   99 (285)
                                                                      ..+++||++++++|.+++.....  ..+...+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  166 (332)
T 3qd2_B           87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC  166 (332)
T ss_dssp             C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred             hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence                                                            37899999999999999976543  2556678


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc----------ceecccccccccc
Q 039392          100 LNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS----------TIQTQTLATIGYM  169 (285)
Q Consensus       100 ~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~----------~~~~~~~~~~~~~  169 (285)
                      +.++.||+.||.|||   ++|++|+||||+||+++.++.++|+|||++.........          .......+++.|+
T Consensus       167 ~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  243 (332)
T 3qd2_B          167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM  243 (332)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred             HHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence            999999999999999   999999999999999999999999999999877653211          1223456899999


Q ss_pred             CCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHH
Q 039392          170 APEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSF  249 (285)
Q Consensus       170 ~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (285)
                      |||.+.+..++.++||||||+++++|++|..|+.....       ........         .      ........+++
T Consensus       244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-------~~~~~~~~---------~------~~~~~~~~~~~  301 (332)
T 3qd2_B          244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-------IITDVRNL---------K------FPLLFTQKYPQ  301 (332)
T ss_dssp             CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-------HHHHHHTT---------C------CCHHHHHHCHH
T ss_pred             ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-------HHHHhhcc---------C------CCcccccCChh
Confidence            99999999999999999999999999998776432110       00000000         0      00113455677


Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      +.+++.+||..||.+|||+++++++
T Consensus       302 ~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          302 EHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHccCCCCcCCCHHHHhhc
Confidence            8999999999999999999999874


No 132
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=8.2e-47  Score=319.02  Aligned_cols=264  Identities=13%  Similarity=0.144  Sum_probs=206.2

Q ss_pred             CCCCCceecccCceEEEEEEeC---------CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccc----------
Q 039392            1 GFSENNLIGRGGFGSVFKARLG---------DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKV----------   61 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~---------~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~----------   61 (285)
                      +|++.+.||+|+||.||+|...         +++.||+|++...     +.+.+|++++++++||||+++          
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (352)
T 2jii_A           43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL  117 (352)
T ss_dssp             EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred             eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence            4778899999999999999764         3789999998754     456789999999999999984          


Q ss_pred             -----cceecc-CCceEEEEeccCCCCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC
Q 039392           62 -----ISSCSN-EEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD  134 (285)
Q Consensus        62 -----~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~  134 (285)
                           ++++.. ....++|||++ +++|.+++... ...+++..++.++.||+.||.|||   ++|++|+||||+||+++
T Consensus       118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVD  193 (352)
T ss_dssp             SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEE
T ss_pred             CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEc
Confidence                 444443 67889999999 88999999765 345999999999999999999999   99999999999999999


Q ss_pred             CCC--cEEEeeeccceecCcccccc-----eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccc
Q 039392          135 DNM--VAHLSDFGIAKLLTREDIST-----IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFN  207 (285)
Q Consensus       135 ~~~--~~~i~df~~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~  207 (285)
                      .++  .++|+|||++..........     ......+++.|+|||.+.+..++.++||||||+++|+|++|..||.....
T Consensus       194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  273 (352)
T 2jii_A          194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP  273 (352)
T ss_dssp             TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence            988  99999999998765432211     11334688999999999998999999999999999999999999987543


Q ss_pred             cchhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          208 GEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                      ................. ....         .......++.++.+++.+||..||.+|||++++++.|+++.++..
T Consensus       274 ~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          274 NTEDIMKQKQKFVDKPG-PFVG---------PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             CHHHHHHHHHHHHHSCC-CEEC---------TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhccCChh-hhhh---------hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            33322222211111100 0000         000122446779999999999999999999999999999987753


No 133
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.5e-46  Score=309.92  Aligned_cols=267  Identities=21%  Similarity=0.259  Sum_probs=200.3

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||+||+|... +|+.||+|++....  ....+.+.+|+++++.++||||+++++++...+..++|||+
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY   83 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence            4888999999999999999864 68999999886543  23356678899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +++++|.+++.... .++...++.++.|++.||.|||   ++|++|+||+|+||+++.++.++|+|||++.......  .
T Consensus        84 ~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~  157 (311)
T 4agu_A           84 CDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS--D  157 (311)
T ss_dssp             CSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             CCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc--c
Confidence            99988988876554 4899999999999999999999   9999999999999999999999999999998765432  1


Q ss_pred             eeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCc--------cccc
Q 039392          158 IQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST--------KEIV  228 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  228 (285)
                      ......+++.|+|||.+.+ ..++.++||||||+++++|++|..||......+.... ..........        ....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  236 (311)
T 4agu_A          158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYL-IRKTLGDLIPRHQQVFSTNQYF  236 (311)
T ss_dssp             --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCSCCHHHHHHHHTCGGG
T ss_pred             ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhccccccccccccccccc
Confidence            2234568889999998876 5689999999999999999999999976543322111 1100000000        0000


Q ss_pred             cccccC---cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          229 DPNLLS---REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       229 ~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ......   ...........++.++.+++.+||..||.+|||+++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            000000   0000011123567789999999999999999999999864


No 134
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.1e-46  Score=315.14  Aligned_cols=258  Identities=24%  Similarity=0.389  Sum_probs=203.9

Q ss_pred             CCCCCceecccCceEEEEEEe------CCCcEEEEEEeecc-chhHHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL------GDGMEVAVKVFNLQ-YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~------~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|++.+.||+|+||.||+|..      .+++.||+|.+... .......+.+|+.+++.++||||+++++++......++
T Consensus        31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (327)
T 2yfx_A           31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI  110 (327)
T ss_dssp             GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEE
Confidence            488899999999999999973      35778999998643 23445678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCC------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCcEEEeee
Q 039392           74 VLEYMPHGSLEKYLHSSN------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDF  144 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~---~~~~~i~df  144 (285)
                      |||++++++|.+++....      ..++...++.++.|++.||.|||   +.|++|+||+|+||+++.   +..++|+||
T Consensus       111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECcc
Confidence            999999999999997653      34888999999999999999999   999999999999999984   446999999


Q ss_pred             ccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCC
Q 039392          145 GIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      |++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+.. ...... ..  
T Consensus       188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~~~-~~--  263 (327)
T 2yfx_A          188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL-EFVTSG-GR--  263 (327)
T ss_dssp             HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-HHHHTT-CC--
T ss_pred             ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH-HHHhcC-CC--
Confidence            99875543322223334567888999999988889999999999999999998 88998654322111 111100 00  


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                                      ...+..++..+.+++.+||..||.+|||+++++++|+.+.++
T Consensus       264 ----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          264 ----------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             ----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence                            001234567799999999999999999999999999998764


No 135
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=3.2e-46  Score=305.56  Aligned_cols=245  Identities=24%  Similarity=0.353  Sum_probs=200.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++....   ......+.+|+.+++.++||||+++++++......++|||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (279)
T 3fdn_A           10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   89 (279)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence            478899999999999999975 467899999986543   2234568889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++..... ++...++.++.|++.||.|||   +.|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        90 ~~~~~~l~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~--  163 (279)
T 3fdn_A           90 YAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--  163 (279)
T ss_dssp             CCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred             cCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc--
Confidence            9999999999876544 899999999999999999999   9999999999999999999999999999986544321  


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                        .....+++.|+|||.+.+..++.++||||||+++++|++|..||......... .......                 
T Consensus       164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-----------------  223 (279)
T 3fdn_A          164 --RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY-KRISRVE-----------------  223 (279)
T ss_dssp             ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHHTC-----------------
T ss_pred             --ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH-HHHHhCC-----------------
Confidence              23446789999999999999999999999999999999999999753322111 1111000                 


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                         ...+...+.++.+++.+||..||.+|||+++++++
T Consensus       224 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          224 ---FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             ---CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence               00122356678999999999999999999999986


No 136
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.7e-46  Score=314.97  Aligned_cols=253  Identities=23%  Similarity=0.295  Sum_probs=199.3

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-----hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-----GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      |++.+.||+|+||.||+|.. .+++.||+|++....     ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus        28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  107 (345)
T 3hko_A           28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM  107 (345)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence            77889999999999999975 568899999986542     345577889999999999999999999999999999999


Q ss_pred             eccCCCCHHHhhhcC---------------------------------------CCccCHHHHHHHHHHHHHHHHHHhcC
Q 039392           76 EYMPHGSLEKYLHSS---------------------------------------NYILDIYQRLNIMIDVASTLEYLHFG  116 (285)
Q Consensus        76 e~~~~~~L~~~~~~~---------------------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~  116 (285)
                      |++++++|.+++...                                       ...+++..++.++.|++.||.|||  
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH--  185 (345)
T 3hko_A          108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH--  185 (345)
T ss_dssp             ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH--
Confidence            999999999988521                                       112467788999999999999999  


Q ss_pred             CCCCeeecCCCCCCeeeCCCC--cEEEeeeccceecCcccc--cceeccccccccccCCcccCC--CccCcchhhHHHHH
Q 039392          117 YSAQVIHCDLKPSNVLLDDNM--VAHLSDFGIAKLLTREDI--STIQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGI  190 (285)
Q Consensus       117 ~~~~~~h~di~~~nili~~~~--~~~i~df~~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Di~slG~  190 (285)
                       +.|++|+||+|+||+++.++  .++|+|||++........  ........+++.|+|||.+.+  ..++.++||||||+
T Consensus       186 -~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  264 (345)
T 3hko_A          186 -NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV  264 (345)
T ss_dssp             -HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred             -HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence             99999999999999998776  899999999986543221  112345568999999998865  57899999999999


Q ss_pred             HHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHH
Q 039392          191 MLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKE  270 (285)
Q Consensus       191 ~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~e  270 (285)
                      ++|+|++|..||......+...... .....                ........+++++.+++.+||+.||.+|||+.+
T Consensus       265 il~el~~g~~pf~~~~~~~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  327 (345)
T 3hko_A          265 LLHLLLMGAVPFPGVNDADTISQVL-NKKLC----------------FENPNYNVLSPLARDLLSNLLNRNVDERFDAMR  327 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHH-HCCCC----------------TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHH-hcccc----------------cCCcccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            9999999999997644332221111 11000                001112345778999999999999999999999


Q ss_pred             HHHH
Q 039392          271 IVTK  274 (285)
Q Consensus       271 il~~  274 (285)
                      ++++
T Consensus       328 ~l~h  331 (345)
T 3hko_A          328 ALQH  331 (345)
T ss_dssp             HHHS
T ss_pred             HhcC
Confidence            9874


No 137
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=4.8e-46  Score=324.36  Aligned_cols=263  Identities=22%  Similarity=0.231  Sum_probs=195.0

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccC------Cce
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNE------EFK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~   71 (285)
                      +|++++.||+|+||+||+|.. .+++.||||++...  .......+.+|+.+++.++||||+++++++...      ...
T Consensus        63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  142 (464)
T 3ttj_A           63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV  142 (464)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence            477899999999999999975 46899999998754  334456788999999999999999999998654      456


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ++|||++++ ++.+.+..   .++...++.++.||+.||.|||   ++|++||||||+||+++.++.+||+|||++....
T Consensus       143 ~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          143 YLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             EEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             EEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence            999999976 56666643   2889999999999999999999   9999999999999999999999999999998765


Q ss_pred             cccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc------
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK------  225 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------  225 (285)
                      ...   ......+|+.|+|||++.+..++.++|||||||++++|++|..||.+....+. ..............      
T Consensus       216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~~lg~p~~~~~~~~~  291 (464)
T 3ttj_A          216 TSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQ  291 (464)
T ss_dssp             -CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCSCCHHHHTTSC
T ss_pred             CCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHcc
Confidence            421   22445789999999999999999999999999999999999999976432211 11111111100000      


Q ss_pred             --------------ccccccccCc--ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          226 --------------EIVDPNLLSR--EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       226 --------------~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                    ....+.....  ...........++++.+|+.+||..||.+|||++|+|++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                          0000000000  000111123347789999999999999999999999875


No 138
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=6.1e-46  Score=304.46  Aligned_cols=256  Identities=23%  Similarity=0.306  Sum_probs=205.6

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccch------hHHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG------RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|++.+.||+|+||.||++... +++.+|+|++.....      ...+.+.+|+.+++.++||||+++++++......++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL   85 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence            3788999999999999999865 689999999875431      135678899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----cEEEeeecccee
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM----VAHLSDFGIAKL  149 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~----~~~i~df~~~~~  149 (285)
                      |||++++++|.+++.... .++...++.++.|++.||.+||   +.|++|+||+|+||+++.++    .++|+|||++..
T Consensus        86 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           86 ILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence            999999999999997654 3899999999999999999999   99999999999999998877    899999999987


Q ss_pred             cCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          150 LTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .....   ......+++.|+|||.+.+..++.++|+||||+++++|++|..||......+. .........         
T Consensus       162 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~---------  228 (283)
T 3bhy_A          162 IEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNISAVNY---------  228 (283)
T ss_dssp             CC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTTCC---------
T ss_pred             ccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHhHhccc---------
Confidence            65432   12344688899999999988999999999999999999999999976432211 111110000         


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH--HHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT--KLVKIRD  280 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~--~l~~l~~  280 (285)
                             ..........+..+.+++.+||..||.+|||++++++  .++++++
T Consensus       229 -------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          229 -------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             -------CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             -------CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence                   0011122355777999999999999999999999998  4555554


No 139
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.6e-46  Score=313.78  Aligned_cols=249  Identities=20%  Similarity=0.262  Sum_probs=181.4

Q ss_pred             CceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCccccccceeccCCceEEEEeccCCCC
Q 039392            5 NNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKVISSCSNEEFKALVLEYMPHGS   82 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~   82 (285)
                      .+.||+|+||+||++.. .+++.||+|++...   ......+|+.+++.+. ||||+++++++......++|||++++++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            47899999999999975 46899999998644   3355678999999997 9999999999999999999999999999


Q ss_pred             HHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---cEEEeeeccceecCccccccee
Q 039392           83 LEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM---VAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        83 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~---~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      |.+++.... .+++..++.++.|++.||.|||   ++|++|+||||+||+++.++   .++|+|||++.......  ...
T Consensus        93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~  166 (325)
T 3kn6_A           93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPL  166 (325)
T ss_dssp             HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred             HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Ccc
Confidence            999997754 4999999999999999999999   99999999999999997665   89999999998665432  222


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccch--hhhhhhhhhcCCCccccccccccCccc
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEM--TLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      ....+++.|+|||.+.+..++.++||||||+++|+|++|..||........  ...........            ....
T Consensus       167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~------------~~~~  234 (325)
T 3kn6_A          167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK------------GDFS  234 (325)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT------------TCCC
T ss_pred             cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc------------CCCC
Confidence            345678999999999999999999999999999999999999976432110  00111111100            0111


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ........+++++.+++.+||..||.+|||+++++++
T Consensus       235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            1112234567889999999999999999999998743


No 140
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=3.1e-46  Score=307.52  Aligned_cols=256  Identities=25%  Similarity=0.370  Sum_probs=204.9

Q ss_pred             CCCCc-eecccCceEEEEEEe---CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEE
Q 039392            2 FSENN-LIGRGGFGSVFKARL---GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         2 y~~~~-~lg~G~~~~v~~~~~---~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      |++.+ .||+|+||.||+|..   .+++.||+|++....  ....+.+.+|+++++.++||||+++++++ ..+..++||
T Consensus        18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~   96 (291)
T 1xbb_A           18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVM   96 (291)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred             hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEE
Confidence            55566 999999999999953   347889999987543  33457788999999999999999999999 566788999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++++++|.+++..... ++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++........
T Consensus        97 e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (291)
T 1xbb_A           97 EMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN  172 (291)
T ss_dssp             ECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred             EeCCCCCHHHHHHhCcC-CCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence            99999999999977544 899999999999999999999   99999999999999999999999999999987654332


Q ss_pred             cc-eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          156 ST-IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       156 ~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      .. ......+++.|+|||.+.+..++.++||||||+++++|++ |..||......+..  ........            
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~--~~~~~~~~------------  238 (291)
T 1xbb_A          173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT--AMLEKGER------------  238 (291)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH--HHHHTTCC------------
T ss_pred             cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH--HHHHcCCC------------
Confidence            21 1223345678999999988889999999999999999999 99999764332211  11110000            


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                            ...+..+++++.+++.+||..||.+|||++++++.|+++..+.
T Consensus       239 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          239 ------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             ------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence                  0012345677999999999999999999999999999998764


No 141
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.4e-46  Score=307.55  Aligned_cols=251  Identities=27%  Similarity=0.425  Sum_probs=199.1

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceecc-CCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN-EEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~   79 (285)
                      +|++.+.||+|+||+||++.. +|+.||+|++....  ..+.+.+|+++++.++||||+++++++.. .+..++|||+++
T Consensus        22 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   98 (278)
T 1byg_A           22 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   98 (278)
T ss_dssp             GEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             hceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence            377889999999999999987 48899999987543  44678899999999999999999998654 457899999999


Q ss_pred             CCCHHHhhhcCCC-ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccce
Q 039392           80 HGSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        80 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      +++|.+++..... .++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++.......    
T Consensus        99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----  171 (278)
T 1byg_A           99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----  171 (278)
T ss_dssp             TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc----
Confidence            9999999876433 3788899999999999999999   9999999999999999999999999999987654321    


Q ss_pred             eccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          159 QTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                       ....+++.|+|||.+.+..++.++||||||+++++|++ |..||......+.. ......                   
T Consensus       172 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~-~~~~~~-------------------  230 (278)
T 1byg_A          172 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-PRVEKG-------------------  230 (278)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH-HHHTTT-------------------
T ss_pred             -cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHhcC-------------------
Confidence             23356778999999988889999999999999999998 99998764322211 111000                   


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      .....+..+++++.+++.+||..||.+|||++++++.|++++..-
T Consensus       231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          231 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence            001112345778999999999999999999999999999998764


No 142
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.7e-46  Score=312.83  Aligned_cols=256  Identities=29%  Similarity=0.468  Sum_probs=204.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEE--EEEEeeccc-hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEV--AVKVFNLQY-GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~--~iK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||+|.. .++..+  ++|.+.... ....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  105 (327)
T 1fvr_A           26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI  105 (327)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEE
Confidence            478899999999999999974 356654  899886432 33456788999999999 8999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCC---------------CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEE
Q 039392           76 EYMPHGSLEKYLHSSN---------------YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAH  140 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~  140 (285)
                      |++++++|.+++....               ..++...++.++.||+.||.+||   ++|++|+||+|+||+++.++.++
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~k  182 (327)
T 1fvr_A          106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK  182 (327)
T ss_dssp             CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEE
T ss_pred             ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeEE
Confidence            9999999999987643               35899999999999999999999   99999999999999999999999


Q ss_pred             EeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhh
Q 039392          141 LSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDW  219 (285)
Q Consensus       141 i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~  219 (285)
                      |+|||++.......   ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||......+.. ...... 
T Consensus       183 L~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~-~~~~~~-  257 (327)
T 1fvr_A          183 IADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-EKLPQG-  257 (327)
T ss_dssp             ECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HHGGGT-
T ss_pred             EcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH-HHhhcC-
Confidence            99999987543221   1223446778999999988889999999999999999998 99999764322211 111000 


Q ss_pred             cCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          220 LPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                                        .....+..+++++.+++.+||..||.+|||++++++.|+++.++.
T Consensus       258 ------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          258 ------------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             ------------------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             ------------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence                              000112345677999999999999999999999999999988653


No 143
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.6e-46  Score=321.90  Aligned_cols=253  Identities=23%  Similarity=0.287  Sum_probs=202.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+++. .+|+.||+|++....   ....+.+.+|..++..++||||+++++++...+.+|+|||
T Consensus        62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE  141 (412)
T 2vd5_A           62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME  141 (412)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred             hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEc
Confidence            478889999999999999986 479999999987532   2233457889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |+++++|.+++.+.+..+++..++.++.||+.||.|||   ++|++||||||+||+++.+|.+||+|||++........ 
T Consensus       142 ~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~-  217 (412)
T 2vd5_A          142 YYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT-  217 (412)
T ss_dssp             CCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC-
T ss_pred             CCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCc-
Confidence            99999999999876556999999999999999999999   99999999999999999999999999999987654321 


Q ss_pred             ceeccccccccccCCcccC-------CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          157 TIQTQTLATIGYMAPEYGK-------EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~-------~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .......+|+.|+|||++.       ...++.++|+||||+++|+|++|..||......+.. ...........      
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-~~i~~~~~~~~------  290 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY-GKIVHYKEHLS------  290 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHTHHHHCC------
T ss_pred             cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH-HHHHhcccCcC------
Confidence            1223457899999999887       356899999999999999999999999764332211 11111000000      


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCC---CCHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQR---INAKEIVTK  274 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R---ps~~eil~~  274 (285)
                         .+      .....++.++.++|++||. +|.+|   |+++|++++
T Consensus       291 ---~p------~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          291 ---LP------LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             ---CC----------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             ---CC------ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence               00      0023457789999999999 99998   589998764


No 144
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=8.1e-47  Score=328.75  Aligned_cols=253  Identities=26%  Similarity=0.431  Sum_probs=202.4

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCCC
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      |++.+.||+|+||.||+|...++..||||++..... ..+.+.+|++++++++||||+++++++.. +..++|||+++++
T Consensus       186 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~g  263 (452)
T 1fmk_A          186 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  263 (452)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred             ceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCC
Confidence            567789999999999999988788899999875432 34678899999999999999999999876 6688999999999


Q ss_pred             CHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           82 SLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        82 ~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      +|.+++... ...++...++.++.|++.||+|||   +++++||||+|+||+++.++.+||+|||++....... .....
T Consensus       264 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~  339 (452)
T 1fmk_A          264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQ  339 (452)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-eeccc
Confidence            999999753 234889999999999999999999   9999999999999999999999999999998765432 11222


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+.. ......                   .+
T Consensus       340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-~~i~~~-------------------~~  399 (452)
T 1fmk_A          340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERG-------------------YR  399 (452)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-HHHHTT-------------------CC
T ss_pred             CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcC-------------------CC
Confidence            3446778999999988899999999999999999999 99998764332211 111100                   00


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                      ...+..++..+.++|.+||..||.+|||++++++.|+++..
T Consensus       400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            11133567789999999999999999999999999988754


No 145
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=2.3e-46  Score=329.07  Aligned_cols=248  Identities=23%  Similarity=0.316  Sum_probs=202.2

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      |++.+.||+|+||+||++... +++.||+|++....  ......+.+|++++++++||||+++++++......++|||++
T Consensus        24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  103 (486)
T 3mwu_A           24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY  103 (486)
T ss_dssp             EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcC
Confidence            788999999999999999754 78999999986432  234567889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCcEEEeeeccceecCcccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~---~~~~~~i~df~~~~~~~~~~~  155 (285)
                      .+++|.+.+..... +++..++.++.||+.||.|||   ++|++||||||+||+++   .++.++|+|||++....... 
T Consensus       104 ~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-  178 (486)
T 3mwu_A          104 TGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-  178 (486)
T ss_dssp             CSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred             CCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC-
Confidence            99999988866543 899999999999999999999   99999999999999995   45679999999997665432 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                        ......+++.|+|||++.+ .++.++||||||+++|+|++|..||.+....+. .........               
T Consensus       179 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~---------------  239 (486)
T 3mwu_A          179 --KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKY---------------  239 (486)
T ss_dssp             -----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCC---------------
T ss_pred             --ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCC---------------
Confidence              2234568999999999876 589999999999999999999999976432221 111111110               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                       .........+++++.++|++||..||.+|||+++++++
T Consensus       240 -~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          240 -AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             -CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             -CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             11112234567889999999999999999999999985


No 146
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=6.8e-47  Score=329.00  Aligned_cols=247  Identities=21%  Similarity=0.282  Sum_probs=194.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||++.. .+|+.||+|++....   ......+.+|+.+++.++||||+++++++...+.+++|||
T Consensus       149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e  228 (446)
T 4ejn_A          149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME  228 (446)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred             HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence            377889999999999999975 578999999987542   2334567789999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYS-AQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |+++++|.+++.... .+++..++.++.||+.||+|||   + .|++||||||+||+++.++.++|+|||++....... 
T Consensus       229 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-  303 (446)
T 4ejn_A          229 YANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-  303 (446)
T ss_dssp             CCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred             eCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC-
Confidence            999999999987654 4899999999999999999999   8 899999999999999999999999999997543321 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       .......+|+.|+|||++.+..++.++||||||+++|+|++|..||......... .........              
T Consensus       304 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~i~~~~~~--------------  367 (446)
T 4ejn_A          304 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-ELILMEEIR--------------  367 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHCCCC--------------
T ss_pred             -cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH-HHHHhCCCC--------------
Confidence             2234467899999999999999999999999999999999999999754322211 111110000              


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCC-----CHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----s~~eil~~  274 (285)
                            .+..+++++.++|.+||..||.+||     |+++++++
T Consensus       368 ------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          368 ------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             ------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             ------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence                  1223567799999999999999999     99999864


No 147
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.1e-45  Score=304.02  Aligned_cols=246  Identities=25%  Similarity=0.381  Sum_probs=198.6

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceecc----CCceEEE
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSN----EEFKALV   74 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~~v   74 (285)
                      |++.+.||+|+||+||+|.. .++..|++|.+....  ....+.+.+|+.+++.++||||+++++++..    ....++|
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            56678999999999999975 468889999987543  4455778899999999999999999998754    4568999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeC-CCCcEEEeeeccceecC
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQ--VIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~h~di~~~nili~-~~~~~~i~df~~~~~~~  151 (285)
                      ||++++++|.+++..... ++...++.++.|++.||.|||   +.+  ++|+||+|+||+++ .++.++|+|||++....
T Consensus       108 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEecCCCCHHHHHHHccC-CCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            999999999999976543 899999999999999999999   888  99999999999998 88999999999997554


Q ss_pred             cccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN  231 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                      ...    .....+++.|+|||.+.+ .++.++||||||+++++|++|..||..................+          
T Consensus       184 ~~~----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------  248 (290)
T 1t4h_A          184 ASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----------  248 (290)
T ss_dssp             TTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----------
T ss_pred             ccc----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc----------
Confidence            321    233468899999998764 58999999999999999999999997644333322221111100          


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                              .......++++.+++.+||..||.+|||+++++++
T Consensus       249 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          249 --------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             --------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             --------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                    01123345679999999999999999999999864


No 148
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=3.6e-46  Score=314.15  Aligned_cols=245  Identities=27%  Similarity=0.375  Sum_probs=200.6

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      |++.+.||+|+||+||+|.. .+++.||+|++....   ....+.+.+|+++++.++||||+++++++...+..++|||+
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  135 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY  135 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence            56788999999999999975 579999999987432   34456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +. ++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++......    
T Consensus       136 ~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----  207 (348)
T 1u5q_A          136 CL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----  207 (348)
T ss_dssp             CS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----
T ss_pred             CC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC----
Confidence            97 4888888665566999999999999999999999   999999999999999999999999999999765432    


Q ss_pred             eeccccccccccCCcccC---CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          158 IQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~---~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                        ....+++.|+|||.+.   ...++.++||||||+++++|++|..||.......... .......+.            
T Consensus       208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~-~~~~~~~~~------------  272 (348)
T 1u5q_A          208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPA------------  272 (348)
T ss_dssp             --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCC------------
T ss_pred             --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhcCCCC------------
Confidence              3356899999999874   5678999999999999999999999986543222111 111100000            


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL  275 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l  275 (285)
                            ......+..+.+++.+||+.||.+|||+++++++-
T Consensus       273 ------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~  307 (348)
T 1u5q_A          273 ------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  307 (348)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred             ------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence                  00123456789999999999999999999998653


No 149
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=4.8e-46  Score=306.89  Aligned_cols=262  Identities=19%  Similarity=0.226  Sum_probs=207.7

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCcccccccee-ccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC-SNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.....  .+.+.+|+++++.++|++++..+..+ ......+++||++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 4hgt_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence            488999999999999999975 5789999998754432  24577899999999988877766655 6677889999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCcEEEeeeccceecCcccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili---~~~~~~~i~df~~~~~~~~~~~  155 (285)
                       +++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||++   +.++.++|+|||++........
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             -CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence             88999999866666999999999999999999999   9999999999999999   7899999999999987654322


Q ss_pred             c-----ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchh--hhhhhhhhcCCCccccc
Q 039392          156 S-----TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT--LKHWVNDWLPISTKEIV  228 (285)
Q Consensus       156 ~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~  228 (285)
                      .     .......+++.|+|||.+.+..++.++||||||+++|+|++|..||.........  ............     
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----  238 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-----  238 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-----
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-----
Confidence            1     1223456899999999999999999999999999999999999999764332111  111000000000     


Q ss_pred             cccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          229 DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                                .......+++++.+++.+||+.||.+|||++++++.|+++.++..
T Consensus       239 ----------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          239 ----------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             ----------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             ----------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence                      000113456789999999999999999999999999999998753


No 150
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.2e-46  Score=315.67  Aligned_cols=239  Identities=25%  Similarity=0.348  Sum_probs=199.6

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch--------hHHHHHHHHHHHHccCCCCccccccceeccCCceE
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--------RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   72 (285)
                      |++.+.||+|+||+||+|.. .+++.||+|++.....        ...+.+.+|+++++.++||||+++++++...+..+
T Consensus        26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~  105 (335)
T 3dls_A           26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQ  105 (335)
T ss_dssp             EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEE
Confidence            77889999999999999974 5789999999875431        13345678999999999999999999999999999


Q ss_pred             EEEeccCCC-CHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           73 LVLEYMPHG-SLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        73 ~v~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      +|||++.++ +|.+++..... ++...++.++.||+.||.|||   ++|++|+||||+||+++.++.++|+|||++....
T Consensus       106 lv~e~~~~g~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~  181 (335)
T 3dls_A          106 LVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE  181 (335)
T ss_dssp             EEEECCTTSCBHHHHHHTCCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence            999998665 99999876554 999999999999999999999   9999999999999999999999999999998765


Q ss_pred             cccccceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      ....   .....+++.|+|||.+.+..+ +.++||||||+++|+|++|..||.......                   ..
T Consensus       182 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------------------~~  239 (335)
T 3dls_A          182 RGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-------------------EA  239 (335)
T ss_dssp             TTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-------------------TT
T ss_pred             CCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-------------------hh
Confidence            5322   233468999999999888776 889999999999999999999986521100                   00


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ..        ..+..++.++.+++.+||..||.+|||+++++++
T Consensus       240 ~~--------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          240 AI--------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             CC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             cc--------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00        0012256679999999999999999999999985


No 151
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.9e-46  Score=320.76  Aligned_cols=267  Identities=22%  Similarity=0.295  Sum_probs=192.6

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc--chhHHHHHHHHHHHHccCC-CCccccccceeccC--CceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIH-HRNIIKVISSCSNE--EFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~--~~~~~v   74 (285)
                      +|++.+.||+|+||.||+|.. .+|+.||+|++...  .......+.+|+.+++.+. ||||+++++++...  ...++|
T Consensus        10 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv   89 (388)
T 3oz6_A           10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV   89 (388)
T ss_dssp             TEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred             ceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence            488899999999999999975 57899999998543  2344566788999999997 99999999998644  478999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      ||++++ +|..++...  .++...+..++.||+.||+|||   +.|++||||||+||+++.++.+||+|||+++......
T Consensus        90 ~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           90 FDYMET-DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EECCSE-EHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             ecccCc-CHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            999974 899988764  4889999999999999999999   9999999999999999999999999999998654311


Q ss_pred             -------------------ccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhh
Q 039392          155 -------------------ISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH  214 (285)
Q Consensus       155 -------------------~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~  214 (285)
                                         .........+|++|+|||++.+ ..++.++|||||||++++|++|..||.+...... ...
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~  242 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ-LER  242 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence                               0112234578999999998876 5789999999999999999999999976433222 121


Q ss_pred             hhhhhcCCCcccccc--------------------ccccCccc-------chhhhhhHhHHHHHHhhhcccccCcCCCCC
Q 039392          215 WVNDWLPISTKEIVD--------------------PNLLSRED-------IHFVAKEQCVSFVFNVAMECTVESPEQRIN  267 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~--------------------~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  267 (285)
                      ...............                    ........       ........+++++.+|+.+||..||.+|||
T Consensus       243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t  322 (388)
T 3oz6_A          243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS  322 (388)
T ss_dssp             HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence            211111111100000                    00000000       000011245778999999999999999999


Q ss_pred             HHHHHHH
Q 039392          268 AKEIVTK  274 (285)
Q Consensus       268 ~~eil~~  274 (285)
                      ++|++++
T Consensus       323 ~~e~l~H  329 (388)
T 3oz6_A          323 ANDALKH  329 (388)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhCC
Confidence            9999876


No 152
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.9e-46  Score=308.72  Aligned_cols=249  Identities=20%  Similarity=0.304  Sum_probs=201.7

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      +|++.+.||+|+||+||++... +|+.||+|++........+.+.+|+.+++.++||||+++++++......++|||+++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   89 (304)
T 2jam_A           10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS   89 (304)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence            3778899999999999999854 789999999986554445678899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCcEEEeeeccceecCccccc
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili---~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      +++|.+++.... .++...++.++.|++.||.|||   +.|++|+||+|+||++   +.++.++|+|||++.......  
T Consensus        90 ~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~--  163 (304)
T 2jam_A           90 GGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--  163 (304)
T ss_dssp             SCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT--
T ss_pred             CccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc--
Confidence            999999886654 3899999999999999999999   9999999999999999   788999999999987654321  


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                        .....+++.|+|||.+.+..++.++||||||+++++|++|..||........ ...........              
T Consensus       164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~--------------  226 (304)
T 2jam_A          164 --MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL-FEKIKEGYYEF--------------  226 (304)
T ss_dssp             --THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHCCCCC--------------
T ss_pred             --cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCCCC--------------
Confidence              1234578899999999999999999999999999999999999976432211 11111111100              


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .......++.++.+++.+||..||.+|||+++++++
T Consensus       227 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          227 --ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             --CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             --CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence              001123456779999999999999999999999874


No 153
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2.5e-46  Score=313.20  Aligned_cols=266  Identities=21%  Similarity=0.262  Sum_probs=196.7

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch--hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++.....  .....+.+|+++++.++||||+++++++......++|||+
T Consensus        35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  114 (329)
T 3gbz_A           35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY  114 (329)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence            478899999999999999974 4789999999865432  2345677899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----CCCCcEEEeeeccceecCc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL-----DDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili-----~~~~~~~i~df~~~~~~~~  152 (285)
                      +++ +|.+++..... +++..++.++.||+.||.|||   ++|++|+||||+||++     +..+.++|+|||++.....
T Consensus       115 ~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~  189 (329)
T 3gbz_A          115 AEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI  189 (329)
T ss_dssp             CSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred             CCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence            975 99999876654 899999999999999999999   9999999999999999     4555699999999987653


Q ss_pred             ccccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc--
Q 039392          153 EDISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD--  229 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  229 (285)
                      ..  .......+++.|+|||.+.+. .++.++||||||+++|+|++|..||......+.... ...............  
T Consensus       190 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  266 (329)
T 3gbz_A          190 PI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK-IFEVLGLPDDTTWPGVT  266 (329)
T ss_dssp             ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHHHCCCCTTTSTTGG
T ss_pred             cc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHH-HHHHhCCCchhhhhhhh
Confidence            31  122344678999999998775 589999999999999999999999976433322211 111111111000000  


Q ss_pred             --------ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 --------PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 --------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                              ................++.++.+|+.+||..||.+|||++|++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence                    000111112222234467889999999999999999999999863


No 154
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=4.2e-46  Score=309.44  Aligned_cols=243  Identities=21%  Similarity=0.214  Sum_probs=191.9

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHc-cCCCCccccccceeccCCceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMK-SIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~-~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      |++.++||+|+||+||+|... +++.||||++....  .........|+..+. ..+|+||+++++++...+..++|||+
T Consensus        59 y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~  138 (311)
T 3p1a_A           59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL  138 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEec
Confidence            677889999999999999865 79999999875432  222333444554444 44899999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      + +++|.+++......+++..++.++.|++.||.|||   +.+++|+||||+||+++.++.+||+|||++.......   
T Consensus       139 ~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~---  211 (311)
T 3p1a_A          139 C-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG---  211 (311)
T ss_dssp             C-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC---
Confidence            9 66999988776667999999999999999999999   9999999999999999999999999999998765432   


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRED  237 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
                      ......+|+.|+|||.+.+ .++.++||||||+++++|++|..|+.....    .......                  .
T Consensus       212 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~~------------------~  268 (311)
T 3p1a_A          212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQG------------------Y  268 (311)
T ss_dssp             ---CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTTT------------------C
T ss_pred             CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhcc------------------C
Confidence            2234458999999998876 789999999999999999999776543211    1111000                  0


Q ss_pred             chhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          238 IHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ........++.++.+++.+||+.||.+|||+++++++
T Consensus       269 ~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          269 LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            0111234567889999999999999999999999863


No 155
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.3e-46  Score=311.16  Aligned_cols=250  Identities=24%  Similarity=0.336  Sum_probs=199.7

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      .|++.+.||+|+||.||+|... +++.+|+|++........+.+.+|+++++.++||||+++++++...+..++|||+++
T Consensus        20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   99 (302)
T 2j7t_A           20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP   99 (302)
T ss_dssp             TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred             ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence            4788899999999999999864 689999999887666667788899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      +++|.+++......++...++.++.|++.||.|||   +.|++|+||+|+||+++.++.++|+|||++......  ....
T Consensus       100 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~  174 (302)
T 2j7t_A          100 GGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQKR  174 (302)
T ss_dssp             TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HHC-
T ss_pred             CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cccc
Confidence            99999998775566999999999999999999999   999999999999999999999999999987543221  1112


Q ss_pred             ccccccccccCCccc-----CCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          160 TQTLATIGYMAPEYG-----KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~-----~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                      ....+++.|+|||.+     ....++.++||||||+++++|++|..||........... .......             
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~-------------  240 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSDPP-------------  240 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHSCCC-------------
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH-HhccCCc-------------
Confidence            334688899999987     466789999999999999999999999976433221111 1110000             


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT  273 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~  273 (285)
                          ....+..++.++.+++.+||..||.+|||++++++
T Consensus       241 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          241 ----TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             ----CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             ----ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                01113345677999999999999999999999986


No 156
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=5.7e-46  Score=306.52  Aligned_cols=262  Identities=19%  Similarity=0.227  Sum_probs=209.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCcccccccee-ccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC-SNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++......  +.+.+|+.+++.++|+++++.+..+ ......++|||++
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            588899999999999999985 57999999998654332  4577899999999988877666655 5667789999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCcEEEeeeccceecCcccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~---~~~~~~i~df~~~~~~~~~~~  155 (285)
                       +++|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++   .++.++|+|||++........
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (296)
T 3uzp_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence             88999999866666999999999999999999999   99999999999999994   889999999999987654322


Q ss_pred             c-----ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccch--hhhhhhhhhcCCCccccc
Q 039392          156 S-----TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEM--TLKHWVNDWLPISTKEIV  228 (285)
Q Consensus       156 ~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~  228 (285)
                      .     .......+++.|+|||.+.+..++.++||||||+++|+|++|..||........  .............     
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----  238 (296)
T 3uzp_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-----  238 (296)
T ss_dssp             CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-----
T ss_pred             ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-----
Confidence            1     112345689999999999999999999999999999999999999976432211  1111111000000     


Q ss_pred             cccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          229 DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                                .......+++++.+++.+||+.||.+|||++++++.|+++.++..
T Consensus       239 ----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          239 ----------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             ----------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ----------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence                      000123457789999999999999999999999999999987653


No 157
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=4.7e-46  Score=322.28  Aligned_cols=269  Identities=21%  Similarity=0.255  Sum_probs=197.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccC-----CceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNE-----EFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~   72 (285)
                      +|++.+.||+|+||.||+|.. .+++.||||++...  .....+.+.+|+++++.++|+||+++++++...     ...|
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~  106 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY  106 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence            488899999999999999975 46889999998653  234456788999999999999999999998765     5789


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      +|||+++ ++|.+++.... .+++..++.++.||+.||.|||   +.|++||||||+||+++.++.+||+|||+++....
T Consensus       107 lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          107 IVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             EEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             EEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            9999996 49999987654 4999999999999999999999   99999999999999999999999999999987654


Q ss_pred             cccc--------------------ceeccccccccccCCccc-CCCccCcchhhHHHHHHHHHHhhCCCCCccccccch-
Q 039392          153 EDIS--------------------TIQTQTLATIGYMAPEYG-KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEM-  210 (285)
Q Consensus       153 ~~~~--------------------~~~~~~~~~~~~~~PE~~-~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~-  210 (285)
                      ....                    .......+|++|+|||++ ....++.++|||||||++|+|++|..||........ 
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p  261 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP  261 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence            3211                    122456789999999985 556799999999999999999987666543211110 


Q ss_pred             --------------------------hhhhhhhhhcCCCcccccc----------ccccCcccchh-hhhhHhHHHHHHh
Q 039392          211 --------------------------TLKHWVNDWLPISTKEIVD----------PNLLSREDIHF-VAKEQCVSFVFNV  253 (285)
Q Consensus       211 --------------------------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~l~~l  253 (285)
                                                ................+..          ..........+ .....+++++.+|
T Consensus       262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL  341 (432)
T 3n9x_A          262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL  341 (432)
T ss_dssp             SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred             cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence                                      0000111011110000000          00000000000 0113467889999


Q ss_pred             hhcccccCcCCCCCHHHHHHH
Q 039392          254 AMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       254 i~~~l~~~p~~Rps~~eil~~  274 (285)
                      +++||..||.+|||++|+|++
T Consensus       342 l~~mL~~dP~~R~ta~e~L~H  362 (432)
T 3n9x_A          342 LESMLKFNPNKRITIDQALDH  362 (432)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTC
T ss_pred             HHHHhcCCcccCCCHHHHhcC
Confidence            999999999999999999874


No 158
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.4e-46  Score=330.38  Aligned_cols=248  Identities=23%  Similarity=0.343  Sum_probs=204.3

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      |++.+.||+|+||.||++... +++.||+|++....   ....+.+.+|++++++++||||+++++++...+..++|||+
T Consensus        28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  107 (484)
T 3nyv_A           28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV  107 (484)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence            778899999999999999754 79999999986432   33457788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCcEEEeeeccceecCccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili---~~~~~~~i~df~~~~~~~~~~  154 (285)
                      +.+++|.+.+..... +++..++.++.||+.||.|||   ++|++|+||||+||++   +.++.++|+|||++.......
T Consensus       108 ~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  183 (484)
T 3nyv_A          108 YTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK  183 (484)
T ss_dssp             CCSCBHHHHHHTCSC-CBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred             CCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence            999999998866544 899999999999999999999   9999999999999999   567899999999998765432


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                         ......+++.|+|||++.+ .++.++||||||+++|+|++|..||......+. .........              
T Consensus       184 ---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~--------------  244 (484)
T 3nyv_A          184 ---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LKKVEKGKY--------------  244 (484)
T ss_dssp             ---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC--------------
T ss_pred             ---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHcCCC--------------
Confidence               1234568999999998866 689999999999999999999999976432221 111111110              


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .........+++++.+++++||..||.+|||+++++++
T Consensus       245 --~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          245 --TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             --CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence              01112234567889999999999999999999999874


No 159
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=9e-46  Score=307.88  Aligned_cols=249  Identities=28%  Similarity=0.366  Sum_probs=201.3

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      .|++.+.||+|+||.||+|... +|+.||+|.+....  ..+.+.+|+.+++.++||||+++++++...+..++|||+++
T Consensus        30 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (314)
T 3com_A           30 VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCG  107 (314)
T ss_dssp             CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCC
Confidence            4778899999999999999754 68999999987543  23667889999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      +++|.+++......++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.......  ...
T Consensus       108 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~  182 (314)
T 3com_A          108 AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--AKR  182 (314)
T ss_dssp             TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--SCB
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--ccc
Confidence            99999999755556999999999999999999999   9999999999999999999999999999998765432  122


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ....+++.|+|||.+.+..++.++||||||+++++|++|..||...........  ......                ..
T Consensus       183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~----------------~~  244 (314)
T 3com_A          183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM--IPTNPP----------------PT  244 (314)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHHSCC----------------CC
T ss_pred             CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HhcCCC----------------cc
Confidence            345688899999999998999999999999999999999999975432211111  000000                00


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      +..+...+.++.+++.+||..||.+|||+++++++
T Consensus       245 ~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          245 FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            11133456779999999999999999999999863


No 160
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.5e-46  Score=316.47  Aligned_cols=263  Identities=17%  Similarity=0.199  Sum_probs=199.5

Q ss_pred             CCCCCceecccCceEEEEEEeC----CCcEEEEEEeeccchhH-----------HHHHHHHHHHHccCCCCcccccccee
Q 039392            1 GFSENNLIGRGGFGSVFKARLG----DGMEVAVKVFNLQYGRV-----------FKSFDVECEMMKSIHHRNIIKVISSC   65 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~~~~~~   65 (285)
                      +|++.+.||+|+||.||+|...    ++..+|+|++.......           ...+.+|+..++.++||||+++++++
T Consensus        38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~  117 (345)
T 2v62_A           38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSG  117 (345)
T ss_dssp             EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEE
T ss_pred             eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccc
Confidence            3778899999999999999864    57889999987543211           12355788899999999999999998


Q ss_pred             cc----CCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC--cE
Q 039392           66 SN----EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM--VA  139 (285)
Q Consensus        66 ~~----~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~--~~  139 (285)
                      ..    ....++|||++ +++|.+++.... .+++..++.++.||+.||+|||   +.|++|+||||+||+++.++  .+
T Consensus       118 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~  192 (345)
T 2v62_A          118 LTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQV  192 (345)
T ss_dssp             EEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSE
T ss_pred             ccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcE
Confidence            77    77899999999 889999997665 5999999999999999999999   99999999999999998777  99


Q ss_pred             EEeeeccceecCccccc-----ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhh
Q 039392          140 HLSDFGIAKLLTREDIS-----TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH  214 (285)
Q Consensus       140 ~i~df~~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~  214 (285)
                      +|+|||++.........     .......+++.|+|||.+.+..++.++||||||+++|+|++|..||............
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  272 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT  272 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence            99999999876543211     1113456899999999999989999999999999999999999999653333222221


Q ss_pred             hhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ..........          ...........++.++.+++.+||..||.+|||++++++.|+++
T Consensus       273 ~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          273 AKTNLLDELP----------QSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             HHHHHHHTTT----------HHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             HHHhhccccc----------HHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence            1111110000          00000001125677899999999999999999999999999765


No 161
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=4.5e-46  Score=328.49  Aligned_cols=249  Identities=22%  Similarity=0.349  Sum_probs=201.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch-------------hHHHHHHHHHHHHccCCCCccccccceec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG-------------RVFKSFDVECEMMKSIHHRNIIKVISSCS   66 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   66 (285)
                      +|++++.||+|+||+||+|.. .+++.+|+|++.....             ...+.+.+|+.+++.++||||+++++++.
T Consensus        37 ~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  116 (504)
T 3q5i_A           37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE  116 (504)
T ss_dssp             TEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             ceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            478899999999999999975 4688999999875421             23467889999999999999999999999


Q ss_pred             cCCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---cEEEee
Q 039392           67 NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM---VAHLSD  143 (285)
Q Consensus        67 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~---~~~i~d  143 (285)
                      .....++|||++++++|.+.+..... +++..++.++.||+.||.|||   +.|++|+||||+||+++.++   .++|+|
T Consensus       117 ~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          117 DKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             cCCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            99999999999999999998866544 999999999999999999999   99999999999999998765   699999


Q ss_pred             eccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC
Q 039392          144 FGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       144 f~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      ||++.......   ......+++.|+|||++. ..++.++||||+|+++|+|++|..||.+....+. .......     
T Consensus       193 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~-----  262 (504)
T 3q5i_A          193 FGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI-IKKVEKG-----  262 (504)
T ss_dssp             CTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHC-----
T ss_pred             CCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcC-----
Confidence            99998775432   223456899999999886 4689999999999999999999999976432221 1111111     


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                 ...........+++++.+++++||..||.+|||+++++++
T Consensus       263 -----------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          263 -----------KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             -----------CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -----------CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                       0111122234567889999999999999999999999864


No 162
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=4.3e-46  Score=305.71  Aligned_cols=248  Identities=25%  Similarity=0.349  Sum_probs=196.0

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      |++.+.||+|+||+||++.. .+++.+|+|++.... ....+.+.+|+++++.++||||+++++++......++|||+++
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  103 (285)
T 3is5_A           24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE  103 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCC
Confidence            77889999999999999975 468999999987553 2345678899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcC---CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCcEEEeeeccceecCcc
Q 039392           80 HGSLEKYLHSS---NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        80 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili---~~~~~~~i~df~~~~~~~~~  153 (285)
                      +++|.+.+...   ...++...++.++.|++.||.|||   +.|++|+||+|+||++   +.++.++|+|||++......
T Consensus       104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~  180 (285)
T 3is5_A          104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD  180 (285)
T ss_dssp             CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred             CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence            99999888542   345999999999999999999999   9999999999999999   45688999999999765543


Q ss_pred             cccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      .   ......+++.|+|||.+. ..++.++||||||+++++|++|..||......+........ ......         
T Consensus       181 ~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~-~~~~~~---------  246 (285)
T 3is5_A          181 E---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK-EPNYAV---------  246 (285)
T ss_dssp             ---------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCC---------
T ss_pred             c---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC-Cccccc---------
Confidence            2   223456889999999875 56899999999999999999999999764332221111100 000000         


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                              .....++++.+++.+||..||.+|||++|++++
T Consensus       247 --------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          247 --------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             ----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             --------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                    011245678899999999999999999999863


No 163
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.2e-46  Score=309.71  Aligned_cols=260  Identities=25%  Similarity=0.371  Sum_probs=198.9

Q ss_pred             CCCCCceecccCceEEEEEEe--CCCc--EEEEEEeecc---chhHHHHHHHHHHHHccCCCCccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL--GDGM--EVAVKVFNLQ---YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~--~~~~--~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   73 (285)
                      +|++.+.||+|+||+||+|.+  .+++  .||+|++...   .....+.+.+|+++++.++||||+++++++.... .++
T Consensus        19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~   97 (291)
T 1u46_A           19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKM   97 (291)
T ss_dssp             GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEE
T ss_pred             HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-cee
Confidence            478899999999999999974  2333  6899988654   2345677889999999999999999999998765 789


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |+|++++++|.+++......++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++......
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence            99999999999999776566999999999999999999999   999999999999999999999999999999876543


Q ss_pred             ccc-ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCcccccccc
Q 039392          154 DIS-TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN  231 (285)
Q Consensus       154 ~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                      ... .......++..|+|||.+.+..++.++||||||+++++|++ |..||......+.. ........           
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~~~~-----------  242 (291)
T 1u46_A          175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL-HKIDKEGE-----------  242 (291)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH-HHHHTSCC-----------
T ss_pred             ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHH-HHHHccCC-----------
Confidence            322 12233456778999999988889999999999999999999 99999764322211 11100000           


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                             ....+..++.++.+++.+||..||.+|||++++++.|+++.....
T Consensus       243 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  287 (291)
T 1u46_A          243 -------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM  287 (291)
T ss_dssp             -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             -------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence                   001123456779999999999999999999999999999876543


No 164
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=9.2e-46  Score=312.09  Aligned_cols=263  Identities=19%  Similarity=0.295  Sum_probs=206.6

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchh-----------------HHHHHHHHHHHHccCCCCccccccc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGR-----------------VFKSFDVECEMMKSIHHRNIIKVIS   63 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~-----------------~~~~~~~e~~~l~~l~h~~i~~~~~   63 (285)
                      +|++.+.||+|+||.||+|.. +++.||+|++......                 ..+.+.+|+.+++.++||||+++++
T Consensus        32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~  110 (348)
T 2pml_X           32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG  110 (348)
T ss_dssp             TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred             ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            588899999999999999988 8999999998754321                 1267889999999999999999999


Q ss_pred             eeccCCceEEEEeccCCCCHHHh------hhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCCCCeeeCC
Q 039392           64 SCSNEEFKALVLEYMPHGSLEKY------LHSS-NYILDIYQRLNIMIDVASTLEYLHFGYS-AQVIHCDLKPSNVLLDD  135 (285)
Q Consensus        64 ~~~~~~~~~~v~e~~~~~~L~~~------~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~-~~~~h~di~~~nili~~  135 (285)
                      ++...+..++|||++++++|.++      +... ...++...++.++.|++.||.|||   + .|++|+||+|+||+++.
T Consensus       111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILMDK  187 (348)
T ss_dssp             EEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEECT
T ss_pred             EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEEcC
Confidence            99999999999999999999998      5542 445999999999999999999999   8 99999999999999999


Q ss_pred             CCcEEEeeeccceecCcccccceeccccccccccCCcccCCC-ccCc-chhhHHHHHHHHHHhhCCCCCccccccchhhh
Q 039392          136 NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-RVSA-NGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK  213 (285)
Q Consensus       136 ~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~-~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~  213 (285)
                      ++.++|+|||.+......    ......++..|+|||.+.+. .++. ++||||||+++++|++|..||...........
T Consensus       188 ~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  263 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN  263 (348)
T ss_dssp             TSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHH
T ss_pred             CCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence            999999999999876432    23456688999999999877 5665 99999999999999999999986554333322


Q ss_pred             hhhhhhcCCCcc--ccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          214 HWVNDWLPISTK--EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       214 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .........+..  ..... ..  ..........++.++.+++.+||..||.+|||+++++++
T Consensus       264 ~i~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          264 NIRTKNIEYPLDRNHFLYP-LT--NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             HHTSCCCCCCCSSSSSTTT-TC--C--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhccCcCCccchhhhhcc-cc--ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            222221111110  00000 00  000011124567889999999999999999999999873


No 165
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=8.6e-46  Score=303.78  Aligned_cols=245  Identities=24%  Similarity=0.342  Sum_probs=203.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++....   ....+.+.+|+++++.++||||+++++++...+..+++||
T Consensus        15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   94 (284)
T 2vgo_A           15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE   94 (284)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence            4788899999999999999754 68899999986542   2234668899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++..... ++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        95 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--  168 (284)
T 2vgo_A           95 FAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR--  168 (284)
T ss_dssp             CCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred             eCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence            9999999999876554 899999999999999999999   9999999999999999999999999999987654321  


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                        .....+++.|+|||.+.+..++.++|+||||+++++|++|..||......... .....    ..             
T Consensus       169 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~----~~-------------  228 (284)
T 2vgo_A          169 --RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH-RRIVN----VD-------------  228 (284)
T ss_dssp             --BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HHHHT----TC-------------
T ss_pred             --cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH-HHHhc----cc-------------
Confidence              23456889999999999999999999999999999999999999754322211 11110    00             


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                         ...+...+.++.+++.+||..||.+|||+++++++
T Consensus       229 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          229 ---LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             ---cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence               00122356678999999999999999999999874


No 166
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5e-46  Score=313.45  Aligned_cols=266  Identities=23%  Similarity=0.310  Sum_probs=201.8

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchh-----HHHHHHHHHHHHccCCCCccccccceeccCCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGR-----VFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +|++.+.||+|+||.||+|... +|+.||+|++......     ....+.+|+++++.++||||+++++++......++|
T Consensus        11 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   90 (346)
T 1ua2_A           11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV   90 (346)
T ss_dssp             --CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred             ccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEE
Confidence            4889999999999999999854 6899999998753321     124577899999999999999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~  154 (285)
                      ||++++ +|.+++......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++.......
T Consensus        91 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (346)
T 1ua2_A           91 FDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  166 (346)
T ss_dssp             EECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             EEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence            999976 899888776666888999999999999999999   9999999999999999999999999999998765432


Q ss_pred             ccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc----
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD----  229 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  229 (285)
                        .......+++.|+|||.+.+. .++.++||||||+++|+|++|..||.+....+. ...............+.+    
T Consensus       167 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~  243 (346)
T 1ua2_A          167 --RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTRIFETLGTPTEEQWPDMCSL  243 (346)
T ss_dssp             --CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTSSSTTSS
T ss_pred             --ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHcCCCChhhhhhhccC
Confidence              222345689999999988664 589999999999999999999999876433222 222222111111110000    


Q ss_pred             --c---cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 --P---NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 --~---~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .   ......+. ......++.++.+++++||..||.+|||++|++++
T Consensus       244 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          244 PDYVTFKSFPGIPL-HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             TTCCCCCCCCCCCH-HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cccccccccCCCCh-HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence              0   00000000 01123557889999999999999999999999874


No 167
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=4e-45  Score=307.44  Aligned_cols=267  Identities=23%  Similarity=0.358  Sum_probs=207.3

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHcc--CCCCccccccceeccCC----ceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKS--IHHRNIIKVISSCSNEE----FKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~~v   74 (285)
                      +|++.+.||+|+||.||+|.. +++.||+|++....   ...+.+|.++++.  ++||||+++++++....    ..++|
T Consensus        43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv  118 (342)
T 1b6c_B           43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV  118 (342)
T ss_dssp             HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred             cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence            378899999999999999987 58999999986443   3456678888877  78999999999997765    78999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG-----YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-----~~~~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      ||++++++|.+++.+.  .++...++.++.|++.||.|||..     ++.+++|+||||+||+++.++.++|+|||++..
T Consensus       119 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~  196 (342)
T 1b6c_B          119 SDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  196 (342)
T ss_dssp             ECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCcee
Confidence            9999999999999764  389999999999999999999931     146899999999999999999999999999977


Q ss_pred             cCcccccc--eeccccccccccCCcccCCC------ccCcchhhHHHHHHHHHHhhC----------CCCCccccccchh
Q 039392          150 LTREDIST--IQTQTLATIGYMAPEYGKEG------RVSANGDVYSFGIMLIETFTR----------KKPTDEIFNGEMT  211 (285)
Q Consensus       150 ~~~~~~~~--~~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~~l~~ll~g----------~~p~~~~~~~~~~  211 (285)
                      ........  ......+++.|+|||.+.+.      .++.++||||||+++|+|++|          ..||.........
T Consensus       197 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~  276 (342)
T 1b6c_B          197 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  276 (342)
T ss_dssp             EETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCccc
Confidence            65432211  22345689999999988765      344789999999999999999          6777654433322


Q ss_pred             hhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          212 LKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ...+..........        ...+ .......++..+.+++.+||..||.+|||+++++++|+++.++.
T Consensus       277 ~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          277 VEEMRKVVCEQKLR--------PNIP-NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHHHHHTTSCCC--------CCCC-GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhC--------CCCc-ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            22222211111000        0000 01123466788999999999999999999999999999998763


No 168
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=8.8e-46  Score=325.86  Aligned_cols=248  Identities=21%  Similarity=0.321  Sum_probs=198.4

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      |++++.||+|+||+||+|... ++..+|+|++....  ......+.+|+.+++.++||||+++++++......++|||++
T Consensus        39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  118 (494)
T 3lij_A           39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECY  118 (494)
T ss_dssp             EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence            778999999999999999854 78999999987543  233466889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCcEEEeeeccceecCcccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~---~~~~~i~df~~~~~~~~~~~  155 (285)
                      ++++|.+.+..... +++..++.++.||+.||.|||   ++|++||||||+||+++.   ++.+||+|||++....... 
T Consensus       119 ~~g~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-  193 (494)
T 3lij_A          119 KGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-  193 (494)
T ss_dssp             CSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-
T ss_pred             CCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-
Confidence            99999988866543 899999999999999999999   999999999999999975   4559999999998765432 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                        ......+|+.|+|||++. ..++.++||||||+++|+|++|..||......+. ...........             
T Consensus       194 --~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~-------------  256 (494)
T 3lij_A          194 --KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LRKVEKGKYTF-------------  256 (494)
T ss_dssp             --CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCC-------------
T ss_pred             --cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCC-------------
Confidence              223456899999999876 4689999999999999999999999976433221 11111111110             


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                         .......+++++.+++++||..||.+|||+++++++
T Consensus       257 ---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          257 ---DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             ---CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             ---CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence               011123567789999999999999999999999975


No 169
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=7.2e-46  Score=327.62  Aligned_cols=249  Identities=22%  Similarity=0.344  Sum_probs=204.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|.. .+|+.||+|++....   ......+.+|+++++.++||||+++++++...+.+++|||
T Consensus       185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE  264 (576)
T 2acx_A          185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT  264 (576)
T ss_dssp             GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEE
Confidence            377889999999999999975 479999999986532   2334567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           77 YMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      |++|++|.+++.... ..+++..++.++.||+.||.|||   ++|++||||||+||+++.+|.+||+|||++....... 
T Consensus       265 y~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-  340 (576)
T 2acx_A          265 LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-  340 (576)
T ss_dssp             CCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred             cCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccCc-
Confidence            999999999887643 34899999999999999999999   9999999999999999999999999999998765432 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchh--hhhhhhhhcCCCcccccccccc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT--LKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                        ......+|+.|+|||++.+..++.++|+||||+++|+|++|..||.........  ........ +.           
T Consensus       341 --~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-~~-----------  406 (576)
T 2acx_A          341 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PE-----------  406 (576)
T ss_dssp             --CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-CC-----------
T ss_pred             --cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-cc-----------
Confidence              123457899999999999999999999999999999999999999764322111  11111100 00           


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCC-----CHHHHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTK  274 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----s~~eil~~  274 (285)
                             ..+..+++++.++|.+||..||.+||     +++|++++
T Consensus       407 -------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          407 -------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             -------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             -------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence                   00234567799999999999999999     78898864


No 170
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.8e-45  Score=305.31  Aligned_cols=266  Identities=22%  Similarity=0.299  Sum_probs=200.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch-----hHHHHHHHHHHHHccC---CCCccccccceeccCC--
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG-----RVFKSFDVECEMMKSI---HHRNIIKVISSCSNEE--   69 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~-----~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~--   69 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++.....     .....+.+|+.+++.+   +||||+++++++....  
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~   89 (308)
T 3g33_A           10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD   89 (308)
T ss_dssp             CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence            588999999999999999985 5789999999864321     1123455677776666   4999999999987654  


Q ss_pred             ---ceEEEEeccCCCCHHHhhhcCCC-ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeec
Q 039392           70 ---FKALVLEYMPHGSLEKYLHSSNY-ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFG  145 (285)
Q Consensus        70 ---~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~  145 (285)
                         ..+++||++.+ +|.+++..... .+++..++.++.|++.||+|||   ++|++|+||||+||+++.++.++|+|||
T Consensus        90 ~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  165 (308)
T 3g33_A           90 REIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFG  165 (308)
T ss_dssp             SEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred             CceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEeeCc
Confidence               57899999964 99999876543 3899999999999999999999   9999999999999999999999999999


Q ss_pred             cceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc
Q 039392          146 IAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK  225 (285)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                      ++.......   ......+|+.|+|||.+.+..++.++||||||+++|+|++|..||......... .............
T Consensus       166 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~i~~~~~~~~~~  241 (308)
T 3g33_A          166 LARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL-GKIFDLIGLPPED  241 (308)
T ss_dssp             CTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH-HHHHHHHCCCCTT
T ss_pred             cccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCChh
Confidence            998665432   223456899999999999999999999999999999999999999764433222 2222111111111


Q ss_pred             cccccc-----ccCcc--cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          226 EIVDPN-----LLSRE--DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       226 ~~~~~~-----~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .+....     .....  .........++.++.+++.+||+.||.+|||++|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            110000     00000  00011123567889999999999999999999999874


No 171
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=2.6e-46  Score=317.25  Aligned_cols=242  Identities=26%  Similarity=0.304  Sum_probs=190.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHH-HccCCCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEM-MKSIHHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||+++.. +++.||+|++....   ......+.+|..+ ++.++||||+++++++...+.+|+||
T Consensus        39 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~  118 (373)
T 2r5t_A           39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL  118 (373)
T ss_dssp             GEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEE
Confidence            4788999999999999999854 68899999987543   2233445566666 57789999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      ||++|++|.+++.+... +++..++.++.||+.||.|||   ++|++||||||+||+++.+|.+||+|||++......  
T Consensus       119 E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~--  192 (373)
T 2r5t_A          119 DYINGGELFYHLQRERC-FLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--  192 (373)
T ss_dssp             ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC--
T ss_pred             eCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC--
Confidence            99999999999876544 889999999999999999999   999999999999999999999999999999753222  


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                      ........+|+.|+|||++.+..++.++|+||||+++|+|++|..||......+. .........               
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-~~~i~~~~~---------------  256 (373)
T 2r5t_A          193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-YDNILNKPL---------------  256 (373)
T ss_dssp             CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH-HHHHHHSCC---------------
T ss_pred             CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhccc---------------
Confidence            1123456789999999999999999999999999999999999999976432221 111111100               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAK  269 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~  269 (285)
                           ..+..++.++.+++.+||..||.+||++.
T Consensus       257 -----~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          257 -----QLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             -----CCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             -----CCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence                 00223566799999999999999999985


No 172
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=6.7e-46  Score=314.63  Aligned_cols=249  Identities=27%  Similarity=0.383  Sum_probs=202.2

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--------hhHHHHHHHHHHHHccC-CCCccccccceeccCCce
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--------GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFK   71 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   71 (285)
                      |++.+.||+|+||.||+|... +|+.||||++....        ....+.+.+|+.+++++ +||||+++++++......
T Consensus        96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  175 (365)
T 2y7j_A           96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM  175 (365)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEE
T ss_pred             cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEE
Confidence            677899999999999999864 79999999987543        12345678899999998 799999999999999999


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ++|||++++++|.+++.... .++...++.++.||+.||.|||   +.|++|+||+|+||+++.+|.++|+|||++....
T Consensus       176 ~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~  251 (365)
T 2y7j_A          176 FLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE  251 (365)
T ss_dssp             EEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence            99999999999999987654 3899999999999999999999   9999999999999999999999999999998765


Q ss_pred             cccccceeccccccccccCCcccCC------CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKE------GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK  225 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                      ...   ......+++.|+|||++.+      ..++.++||||||+++|+|++|..||........ ..........    
T Consensus       252 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~----  323 (365)
T 2y7j_A          252 PGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM-LRMIMEGQYQ----  323 (365)
T ss_dssp             TTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC----
T ss_pred             CCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCC----
Confidence            432   2234568999999998753      3588999999999999999999999965322111 1111110000    


Q ss_pred             ccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          226 EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                  .........+.++.+++.+||..||.+|||+++++++
T Consensus       324 ------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          324 ------------FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             ------------CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ------------CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                        0111123456779999999999999999999999874


No 173
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1e-45  Score=310.28  Aligned_cols=254  Identities=22%  Similarity=0.302  Sum_probs=189.6

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCcccccccee--------ccCCce
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKVISSC--------SNEEFK   71 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~--------~~~~~~   71 (285)
                      |++.+.||+|+||.||++.+ .+++.||+|++........+.+.+|+.+++++. ||||+++++++        ......
T Consensus        30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~  109 (337)
T 3ll6_A           30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF  109 (337)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred             EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence            77889999999999999985 478999999987666666678889999999996 99999999988        344568


Q ss_pred             EEEEeccCCCCHHHhhhc--CCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCcEEEeeeccc
Q 039392           72 ALVLEYMPHGSLEKYLHS--SNYILDIYQRLNIMIDVASTLEYLHFGYSAQ--VIHCDLKPSNVLLDDNMVAHLSDFGIA  147 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~--~~h~di~~~nili~~~~~~~i~df~~~  147 (285)
                      ++++|++. ++|.+++..  ....++...++.++.||+.||.|||   +.|  ++|+||||+||+++.++.++|+|||++
T Consensus       110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  185 (337)
T 3ll6_A          110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA  185 (337)
T ss_dssp             EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred             EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCccc
Confidence            89999996 589888754  3345999999999999999999999   888  999999999999999999999999999


Q ss_pred             eecCcccccc----------eeccccccccccCCccc---CCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhh
Q 039392          148 KLLTREDIST----------IQTQTLATIGYMAPEYG---KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKH  214 (285)
Q Consensus       148 ~~~~~~~~~~----------~~~~~~~~~~~~~PE~~---~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~  214 (285)
                      ..........          ......+++.|+|||.+   .+..++.++||||||+++|+|++|..||........... 
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-  264 (337)
T 3ll6_A          186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG-  264 (337)
T ss_dssp             BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred             eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC-
Confidence            8765432111          11134578899999988   566789999999999999999999999865322111000 


Q ss_pred             hhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          215 WVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                                            ..........+..+.+++++||+.||.+|||+++++++|+.+....
T Consensus       265 ----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          265 ----------------------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             -----------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             ----------------------cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                                  0001112233455889999999999999999999999999998653


No 174
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.9e-46  Score=312.30  Aligned_cols=266  Identities=20%  Similarity=0.260  Sum_probs=197.3

Q ss_pred             CCC-CceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEecc
Q 039392            2 FSE-NNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         2 y~~-~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      |++ .+.||+|+||+||+|.. .+++.||+|++........+.+.+|++++.++ +||||+++++++...+..++|||++
T Consensus        14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   93 (316)
T 2ac3_A           14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM   93 (316)
T ss_dssp             CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence            566 47899999999999974 47899999999776555667888999999885 7999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc---EEEeeeccceecCcccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV---AHLSDFGIAKLLTREDI  155 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~---~~i~df~~~~~~~~~~~  155 (285)
                      ++++|.+++.... .+++..++.++.|++.||.|||   ++|++|+||||+||+++.++.   ++|+|||++........
T Consensus        94 ~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  169 (316)
T 2ac3_A           94 RGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD  169 (316)
T ss_dssp             TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred             CCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence            9999999997654 3899999999999999999999   999999999999999987776   99999999876542211


Q ss_pred             -----cceeccccccccccCCcccCC-----CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC-c
Q 039392          156 -----STIQTQTLATIGYMAPEYGKE-----GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS-T  224 (285)
Q Consensus       156 -----~~~~~~~~~~~~~~~PE~~~~-----~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~  224 (285)
                           ........+++.|+|||.+.+     ..++.++||||||+++|+|++|..||.............   ..... .
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~  246 (316)
T 2ac3_A          170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG---EACPACQ  246 (316)
T ss_dssp             ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCHHHH
T ss_pred             cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccc---ccchhHH
Confidence                 111223458999999998865     458899999999999999999999997643322100000   00000 0


Q ss_pred             cccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          225 KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .....................++.++.+++.+||..||.+|||++|++++
T Consensus       247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            00000000000000001123467789999999999999999999999874


No 175
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.1e-45  Score=313.57  Aligned_cols=249  Identities=17%  Similarity=0.173  Sum_probs=202.3

Q ss_pred             CCCCceecccCceEEEEEE------eCCCcEEEEEEeeccchhHHHHHHHHHHHHccCC---CCccccccceeccCCceE
Q 039392            2 FSENNLIGRGGFGSVFKAR------LGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH---HRNIIKVISSCSNEEFKA   72 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~------~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   72 (285)
                      |++.+.||+|+||+||+|.      ..+++.||+|++.....   ..+.+|.++++.++   |+||+++++.+...+..+
T Consensus        67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~  143 (365)
T 3e7e_A           67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV  143 (365)
T ss_dssp             EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred             EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence            6778899999999999993      45689999999876543   34556777777776   999999999999999999


Q ss_pred             EEEeccCCCCHHHhhhc----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-----------CC
Q 039392           73 LVLEYMPHGSLEKYLHS----SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD-----------NM  137 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~-----------~~  137 (285)
                      +||||+++++|.+++..    ....+++..++.++.||+.||+|||   ++|++||||||+||+++.           ++
T Consensus       144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~  220 (365)
T 3e7e_A          144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSA  220 (365)
T ss_dssp             EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred             EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccC
Confidence            99999999999999864    3445999999999999999999999   999999999999999988           89


Q ss_pred             cEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhh
Q 039392          138 VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVN  217 (285)
Q Consensus       138 ~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~  217 (285)
                      .+||+|||++................+|+.|+|||++.+..++.++||||||+++|+|++|..||...........    
T Consensus       221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~----  296 (365)
T 3e7e_A          221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE----  296 (365)
T ss_dssp             TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC----
T ss_pred             CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec----
Confidence            9999999999766433333444566789999999999999999999999999999999999999865432211100    


Q ss_pred             hhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCC-CCHHHHHHHHHHHHHH
Q 039392          218 DWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQR-INAKEIVTKLVKIRDS  281 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R-ps~~eil~~l~~l~~~  281 (285)
                                   .....        ...+..+.+++.+||+.+|.+| |+++++.+.|+++.++
T Consensus       297 -------------~~~~~--------~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          297 -------------GLFRR--------LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             -------------SCCTT--------CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             -------------hhccc--------cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence                         00000        0124557789999999999998 5888888888887754


No 176
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.6e-45  Score=321.50  Aligned_cols=269  Identities=22%  Similarity=0.243  Sum_probs=185.3

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceec-----cCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCS-----NEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~   72 (285)
                      +|++++.||+|+||+||+|.. .+++.||||++...  .....+.+.+|+++++.++||||+++++++.     ....+|
T Consensus        54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~  133 (458)
T 3rp9_A           54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY  133 (458)
T ss_dssp             TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence            478899999999999999975 47899999998643  2344567889999999999999999999984     336789


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      +|||++ +++|.+++.... .+++..++.++.||+.||.|||   +.|++||||||+||+++.++.+||+|||++.....
T Consensus       134 lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          134 VVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             EEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             EEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            999998 558999887654 4999999999999999999999   99999999999999999999999999999987643


Q ss_pred             cccc-------------------------ceeccccccccccCCccc-CCCccCcchhhHHHHHHHHHHhh---------
Q 039392          153 EDIS-------------------------TIQTQTLATIGYMAPEYG-KEGRVSANGDVYSFGIMLIETFT---------  197 (285)
Q Consensus       153 ~~~~-------------------------~~~~~~~~~~~~~~PE~~-~~~~~~~~~Di~slG~~l~~ll~---------  197 (285)
                      ....                         .......+|++|+|||++ .+..++.++|||||||++|+|++         
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~  288 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH  288 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence            2110                         122345679999999975 45679999999999999999999         


Q ss_pred             --CCCCCcccccc-------------------chhhhhhhhhhcCCCcccccc----------ccccCcccch-hhhhhH
Q 039392          198 --RKKPTDEIFNG-------------------EMTLKHWVNDWLPISTKEIVD----------PNLLSREDIH-FVAKEQ  245 (285)
Q Consensus       198 --g~~p~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~  245 (285)
                        |..+|.+....                   ..................+..          .......... ......
T Consensus       289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (458)
T 3rp9_A          289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA  368 (458)
T ss_dssp             GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred             ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence              55555432210                   000000111011100000000          0000000000 011234


Q ss_pred             hHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          246 CVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       246 ~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .++++.+|+++||..||.+|||++|+|++
T Consensus       369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          369 SSADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            57889999999999999999999999975


No 177
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=8.1e-47  Score=317.28  Aligned_cols=248  Identities=23%  Similarity=0.327  Sum_probs=197.7

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||++.. .+++.||+|++.....    ...+|++++.++ +||||+++++++.+....++|||++
T Consensus        23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~   98 (342)
T 2qr7_A           23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM   98 (342)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence            378889999999999999975 4689999999875432    234577877777 7999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC----CcEEEeeeccceecCccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN----MVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~----~~~~i~df~~~~~~~~~~  154 (285)
                      ++++|.+.+.... .+++..++.++.||+.||.|||   ++|++||||||+||++..+    +.++|+|||++.......
T Consensus        99 ~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           99 KGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             CSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            9999999987654 4899999999999999999999   9999999999999998532    359999999998764432


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccch--hhhhhhhhhcCCCccccccccc
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEM--TLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                        .......+++.|+|||++.+..++.++||||||+++|+|++|..||........  ............          
T Consensus       175 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~----------  242 (342)
T 2qr7_A          175 --GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL----------  242 (342)
T ss_dssp             --CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC----------
T ss_pred             --CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc----------
Confidence              122345679999999999888899999999999999999999999975322111  111111110000          


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                            ....+..++.++.+++++||..||.+|||+++++++
T Consensus       243 ------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          243 ------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             ------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             ------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                  000123467789999999999999999999999875


No 178
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=1.3e-45  Score=318.11  Aligned_cols=250  Identities=22%  Similarity=0.280  Sum_probs=192.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--------hhHHHHHHHHHHHHccCCCCccccccceeccCCce
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--------GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   71 (285)
                      +|.+.+.||+|+||+||+|.. .+++.||+|++....        ......+.+|+.++++++||||+++++++... ..
T Consensus       136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~  214 (419)
T 3i6u_A          136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DY  214 (419)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS-EE
T ss_pred             cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC-ce
Confidence            477889999999999999975 468999999987542        12223577899999999999999999998654 57


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---cEEEeeeccce
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM---VAHLSDFGIAK  148 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~---~~~i~df~~~~  148 (285)
                      ++|||++++++|.+++.... .+++..++.++.|++.||.|||   ++|++|+||||+||+++.++   .+||+|||++.
T Consensus       215 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          215 YIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             EEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence            89999999999999886654 4899999999999999999999   99999999999999997544   59999999998


Q ss_pred             ecCcccccceeccccccccccCCcccCC---CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc
Q 039392          149 LLTREDISTIQTQTLATIGYMAPEYGKE---GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK  225 (285)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                      ......   ......+++.|+|||.+.+   ..++.++||||||+++|+|++|..||...................    
T Consensus       291 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~----  363 (419)
T 3i6u_A          291 ILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN----  363 (419)
T ss_dssp             SCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC----
T ss_pred             ecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC----
Confidence            765432   2234568999999998864   568899999999999999999999997643322222211111100    


Q ss_pred             ccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          226 EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                  ........+++++.+++.+||..||.+|||+++++++
T Consensus       364 ------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          364 ------------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             ------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ------------CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                        0011123467789999999999999999999999974


No 179
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=1.2e-45  Score=304.46  Aligned_cols=247  Identities=20%  Similarity=0.301  Sum_probs=204.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||++... +++.+|+|++....   ....+.+.+|+.+++.++||||+++++++...+..+++||
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   95 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE   95 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEe
Confidence            3778899999999999999864 68899999986542   3445678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++.... .++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++........ 
T Consensus        96 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-  170 (294)
T 2rku_A           96 LCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-  170 (294)
T ss_dssp             CCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred             cCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc-
Confidence            999999999887654 4899999999999999999999   99999999999999999999999999999987653321 


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                       ......+++.|+|||.+.+..++.++|+||||+++++|++|..||......+.... .....                 
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~-----------------  231 (294)
T 2rku_A          171 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNE-----------------  231 (294)
T ss_dssp             -CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-HHTTC-----------------
T ss_pred             -ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-Hhhcc-----------------
Confidence             12345678899999999988899999999999999999999999976432221111 10000                 


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                         ...+...+.++.+++.+||..||.+|||+++++++
T Consensus       232 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          232 ---YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ---CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence               00122345678999999999999999999999875


No 180
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.9e-45  Score=310.83  Aligned_cols=261  Identities=25%  Similarity=0.311  Sum_probs=195.6

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccCC------ce
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE------FK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~   71 (285)
                      .|++.+.||+|+||.||+|.. .+|+.||||++...  .....+.+.+|+++++.++||||+++++++....      ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  105 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF  105 (367)
T ss_dssp             SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence            478889999999999999975 57999999998543  2344567889999999999999999999987653      45


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ++|||++ +++|.+++...  .++...++.++.||+.||.|||   ++|++|+||||+||+++.++.+||+|||++....
T Consensus       106 ~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          106 YLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             EEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            8999999 77999998763  3899999999999999999999   9999999999999999999999999999998765


Q ss_pred             cccccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      ..     .....+|++|+|||.+.+ ..++.++|||||||++++|++|..||.+..... ............+. .....
T Consensus       180 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~-~~~~~  252 (367)
T 1cm8_A          180 SE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPA-EFVQR  252 (367)
T ss_dssp             SS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCH-HHHHT
T ss_pred             cc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCH-HHHHH
Confidence            32     234567999999998877 679999999999999999999999997643221 11111111111110 00000


Q ss_pred             -----------cccCcccchh-hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 -----------NLLSREDIHF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 -----------~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                 .........+ ......++++.+|+.+||..||.+|||+++++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence                       0000000000 1123457789999999999999999999999874


No 181
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=5.8e-46  Score=311.30  Aligned_cols=266  Identities=23%  Similarity=0.323  Sum_probs=200.2

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..++|||+
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  105 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF  105 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence            4778899999999999999764 58999999986443  23345677899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      +++++|.++..... .++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.......  .
T Consensus       106 ~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~  179 (331)
T 4aaa_A          106 VDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--E  179 (331)
T ss_dssp             CSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred             CCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc--c
Confidence            99988888765444 4999999999999999999999   9999999999999999999999999999997665432  1


Q ss_pred             eeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC------------c
Q 039392          158 IQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS------------T  224 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~------------~  224 (285)
                      ......+++.|+|||.+.+. .++.++||||||+++|+|++|..||......+..... ........            .
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  258 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI-MMCLGNLIPRHQELFNKNPVF  258 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHHHCSCCHHHHHHHHHCGGG
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH-HHHhCCCChhhhhHhhhcccc
Confidence            22345688999999988775 7899999999999999999999999765432221111 10000000            0


Q ss_pred             cccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          225 KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .....+.... ..........++.++.+++.+||..||.+|||++|++++
T Consensus       259 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          259 AGVRLPEIKE-REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             TTCCCCCCSS-CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ccccCccccc-cchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0000000000 001111123567889999999999999999999999874


No 182
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.2e-45  Score=331.80  Aligned_cols=252  Identities=23%  Similarity=0.373  Sum_probs=203.3

Q ss_pred             eecccCceEEEEEEe---CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCCCC
Q 039392            7 LIGRGGFGSVFKARL---GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHGS   82 (285)
Q Consensus         7 ~lg~G~~~~v~~~~~---~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   82 (285)
                      .||+|+||.||+|..   .++..||||++.... ....+.+.+|+++++.++||||+++++++.. +..++|||++++++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            799999999999964   356779999987643 3356788999999999999999999999976 56899999999999


Q ss_pred             HHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc-ceecc
Q 039392           83 LEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS-TIQTQ  161 (285)
Q Consensus        83 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~-~~~~~  161 (285)
                      |.+++......++...++.++.||+.||.|||   +++++||||||+||+++.++.+||+|||++......... .....
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~  498 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  498 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence            99999776666999999999999999999999   999999999999999999999999999999876443211 11122


Q ss_pred             ccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchh
Q 039392          162 TLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF  240 (285)
Q Consensus       162 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                      ..+++.|+|||++.+..++.++||||||+++|+|++ |..||......+.. ......                   ...
T Consensus       499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~-~~i~~~-------------------~~~  558 (613)
T 2ozo_A          499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-AFIEQG-------------------KRM  558 (613)
T ss_dssp             ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHH-HHHHTT-------------------CCC
T ss_pred             CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH-HHHHcC-------------------CCC
Confidence            345678999999988899999999999999999998 99999765433221 111100                   001


Q ss_pred             hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          241 VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      ..+..+++++.++|.+||..||.+|||++++++.|+++..+.
T Consensus       559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            113456788999999999999999999999999999988665


No 183
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.6e-45  Score=324.51  Aligned_cols=251  Identities=24%  Similarity=0.310  Sum_probs=203.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+++. .+|+.||+|++....   ....+.+.+|+++++.++||||+++++++.....+++|||
T Consensus       186 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE  265 (543)
T 3c4z_A          186 WFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMT  265 (543)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             heEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEE
Confidence            367788999999999999986 469999999986543   2334667889999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcC---CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           77 YMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        77 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |++|++|.+++...   ...+++..++.++.||+.||.|||   ++|++||||||+||+++.+|.+||+|||++......
T Consensus       266 ~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             CCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             eccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence            99999999988654   235899999999999999999999   999999999999999999999999999999876543


Q ss_pred             cccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLL  233 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                      ..  ......+|+.|+|||++.+..++.++|+||||+++|+|++|..||........... .........          
T Consensus       343 ~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~-~~~~i~~~~----------  409 (543)
T 3c4z_A          343 QT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-LKQRVLEQA----------  409 (543)
T ss_dssp             CC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHH-HHHHHHHCC----------
T ss_pred             Cc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHH-HHHHHhhcc----------
Confidence            21  12345789999999999999999999999999999999999999976432111111 110000000          


Q ss_pred             CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCH-----HHHHH
Q 039392          234 SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINA-----KEIVT  273 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~eil~  273 (285)
                            ...+..+++++.+++++||..||.+||++     +++++
T Consensus       410 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          410 ------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             ------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             ------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence                  00123456779999999999999999964     66664


No 184
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=3.2e-45  Score=313.81  Aligned_cols=246  Identities=20%  Similarity=0.264  Sum_probs=189.6

Q ss_pred             CCCC-ceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHH-ccCCCCccccccceecc----CCceEEE
Q 039392            2 FSEN-NLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMM-KSIHHRNIIKVISSCSN----EEFKALV   74 (285)
Q Consensus         2 y~~~-~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~----~~~~~~v   74 (285)
                      |.+. +.||+|+||+||++.. .+++.||||++...     ..+.+|++++ +..+||||+++++++..    ...+++|
T Consensus        63 y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv  137 (400)
T 1nxk_A           63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV  137 (400)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             ceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence            4444 6899999999999975 46899999998633     3455677776 45589999999998865    5678999


Q ss_pred             EeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCcEEEeeeccceec
Q 039392           75 LEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLL  150 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~---~~~~~i~df~~~~~~  150 (285)
                      |||+++++|.+++.... ..+++..++.++.||+.||.|||   ++|++||||||+||+++.   ++.+||+|||++...
T Consensus       138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~  214 (400)
T 1nxk_A          138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  214 (400)
T ss_dssp             EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence            99999999999997653 35899999999999999999999   999999999999999987   789999999999866


Q ss_pred             CcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchh---hhhhhhhhcCCCcccc
Q 039392          151 TREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT---LKHWVNDWLPISTKEI  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~  227 (285)
                      ....   ......+|+.|+|||++.+..++.++||||||+++|+|++|..||.........   ..........      
T Consensus       215 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~------  285 (400)
T 1nxk_A          215 TSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE------  285 (400)
T ss_dssp             C--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC------
T ss_pred             CCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc------
Confidence            5322   223456799999999999999999999999999999999999999764322110   0111000000      


Q ss_pred             ccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          228 VDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                ........++.++.+||++||..||.+|||+++++++
T Consensus       286 ----------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          286 ----------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             ----------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ----------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                      0001123467789999999999999999999999986


No 185
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.9e-45  Score=300.51  Aligned_cols=246  Identities=26%  Similarity=0.370  Sum_probs=195.7

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++....   ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   91 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME   91 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence            4788999999999999999864 79999999987543   2334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++..... ++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        92 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--  165 (276)
T 2h6d_A           92 YVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--  165 (276)
T ss_dssp             CCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred             ccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence            9999999999976544 899999999999999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       ......+++.|+|||.+.+..+ +.++|+||||+++++|++|..||........ .........               
T Consensus       166 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~---------------  228 (276)
T 2h6d_A          166 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL-FKKIRGGVF---------------  228 (276)
T ss_dssp             ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC---------------
T ss_pred             -ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcCcc---------------
Confidence             1234467889999999887764 6899999999999999999999975322211 111110000               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                           ..+..++.++.+++.+||..||.+|||+++++++
T Consensus       229 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          229 -----YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             -----cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                 0122345678999999999999999999999985


No 186
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.1e-45  Score=309.99  Aligned_cols=247  Identities=20%  Similarity=0.294  Sum_probs=204.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|.+.+.||+|+||.||++... +++.+++|++....   ....+.+.+|+.+++.++|+||+++++++...+..++|||
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  121 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE  121 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence            3778899999999999999754 58899999987542   3455678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++.... .++...++.++.||+.||.|||   ++|++|+||+|+||+++.++.++|+|||++........ 
T Consensus       122 ~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-  196 (335)
T 2owb_A          122 LCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-  196 (335)
T ss_dssp             CCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred             cCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence            999999999887654 4899999999999999999999   99999999999999999999999999999987653321 


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                       ......++..|+|||.+.+..++.++||||||+++|+|++|..||......+.... ......                
T Consensus       197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~----------------  258 (335)
T 2owb_A          197 -RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR-IKKNEY----------------  258 (335)
T ss_dssp             -CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-HHHTCC----------------
T ss_pred             -cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH-HhcCCC----------------
Confidence             12345688899999999988999999999999999999999999975432221111 100000                


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                          ..+..++.++.+++.+||..||.+|||+++++++
T Consensus       259 ----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          259 ----SIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             ----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                0122345678999999999999999999999874


No 187
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.1e-45  Score=304.03  Aligned_cols=249  Identities=24%  Similarity=0.285  Sum_probs=188.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||+||++.. .+++.||+|++....  ....+.+.++...++.++||||+++++++...+..++|||+
T Consensus         8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~   87 (290)
T 3fme_A            8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL   87 (290)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEEC
T ss_pred             hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEeh
Confidence            478899999999999999985 578999999987543  22334455566668888999999999999999999999999


Q ss_pred             cCCCCHHHhhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           78 MPHGSLEKYLHS---SNYILDIYQRLNIMIDVASTLEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        78 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~-~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      +++ +|.+++..   ....+++..++.++.|++.||.|||   ++ |++|+||||+||+++.++.++|+|||++......
T Consensus        88 ~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A           88 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             CSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred             hcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence            975 88777653   3445999999999999999999999   87 9999999999999999999999999999876543


Q ss_pred             cccceeccccccccccCCccc----CCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYG----KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~----~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .   ......+++.|+|||.+    .+..++.++||||||+++++|++|..||.....................      
T Consensus       164 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------  234 (290)
T 3fme_A          164 V---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL------  234 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC------
T ss_pred             c---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc------
Confidence            2   12334688899999985    5567899999999999999999999999764433333222222111110      


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                  ....+++++.+++.+||..||.+|||+++++++
T Consensus       235 ------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          235 ------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             ------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             ------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence                        012346679999999999999999999999883


No 188
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.7e-45  Score=304.79  Aligned_cols=247  Identities=27%  Similarity=0.378  Sum_probs=204.8

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccC
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      |++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++......++|||+++
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  103 (303)
T 3a7i_A           24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG  103 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence            67889999999999999975 468999999987543 3445778899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccccee
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQ  159 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~  159 (285)
                      +++|.+++...  .++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.......  ...
T Consensus       104 ~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~  176 (303)
T 3a7i_A          104 GGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKR  176 (303)
T ss_dssp             TEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--CCB
T ss_pred             CCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--ccc
Confidence            99999998653  4899999999999999999999   9999999999999999999999999999998765432  122


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ....+++.|+|||.+.+..++.++||||||+++++|++|..||...........  .......                 
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~-----------------  237 (303)
T 3a7i_A          177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL--IPKNNPP-----------------  237 (303)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHHSCCC-----------------
T ss_pred             CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH--hhcCCCC-----------------
Confidence            345688899999999999999999999999999999999999875432211111  1000000                 


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKL  275 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l  275 (285)
                       .....++..+.+++.+||..||.+|||+++++++.
T Consensus       238 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          238 -TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             -CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             -CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence             00223456699999999999999999999999864


No 189
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=2.9e-45  Score=302.15  Aligned_cols=249  Identities=25%  Similarity=0.358  Sum_probs=198.6

Q ss_pred             CCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCCC
Q 039392            3 SENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         3 ~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      .....||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|||+++++
T Consensus        25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             SSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             CCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            3445999999999999975 568899999998766666678899999999999999999999999999999999999999


Q ss_pred             CHHHhhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-CCcEEEeeeccceecCcccccce
Q 039392           82 SLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTREDISTI  158 (285)
Q Consensus        82 ~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~-~~~~~i~df~~~~~~~~~~~~~~  158 (285)
                      +|.+++.....  ..+...++.++.|++.||.+||   ++|++|+||+|+||+++. ++.++|+|||++.......  ..
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~  179 (295)
T 2clq_A          105 SLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PC  179 (295)
T ss_dssp             EHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------
T ss_pred             CHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--Cc
Confidence            99999876532  3668889999999999999999   999999999999999987 8999999999998765422  11


Q ss_pred             eccccccccccCCcccCCC--ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          159 QTQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       159 ~~~~~~~~~~~~PE~~~~~--~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                      .....+++.|+|||.+.+.  .++.++||||||+++++|++|..||...................               
T Consensus       180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------  244 (295)
T 2clq_A          180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH---------------  244 (295)
T ss_dssp             -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC---------------
T ss_pred             ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc---------------
Confidence            2345688999999988764  37899999999999999999999997543322211111000000               


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                         ...+..++.++.+++.+||..||.+|||+++++++
T Consensus       245 ---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          245 ---PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             ---CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             ---ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence               00123456779999999999999999999999863


No 190
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=7.2e-46  Score=314.19  Aligned_cols=266  Identities=21%  Similarity=0.301  Sum_probs=203.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||+||++... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|||++
T Consensus        34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  113 (360)
T 3eqc_A           34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM  113 (360)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECC
Confidence            4788899999999999999754 78999999987653 344577889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIST  157 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~-~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~  157 (285)
                      ++++|.+++..... ++...++.++.|++.||.|||   +. |++|+||+|+||+++.++.++|+|||++......    
T Consensus       114 ~~~~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----  185 (360)
T 3eqc_A          114 DGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----  185 (360)
T ss_dssp             TTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----
T ss_pred             CCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc----
Confidence            99999999976554 899999999999999999999   75 9999999999999999999999999998654322    


Q ss_pred             eeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhh---hcCC-----Ccccccc
Q 039392          158 IQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVND---WLPI-----STKEIVD  229 (285)
Q Consensus       158 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~  229 (285)
                      ......+++.|+|||.+.+..++.++||||||+++|+|++|..||................   ....     .......
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (360)
T 3eqc_A          186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN  265 (360)
T ss_dssp             C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred             cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence            1234568899999999999999999999999999999999999997643322211100000   0000     0000000


Q ss_pred             c----ccc-----------CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 P----NLL-----------SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~----~~~-----------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .    ...           ............++.++.+|+.+||..||.+|||+++++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            0    000           00000000112356789999999999999999999999975


No 191
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=4e-46  Score=305.58  Aligned_cols=247  Identities=26%  Similarity=0.399  Sum_probs=202.5

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceecc------------
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN------------   67 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------------   67 (285)
                      +|++.+.||+|+||.||+|... +++.||+|.+....    ..+.+|+++++.++||||+++++++..            
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   87 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS   87 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred             ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence            3778899999999999999865 79999999987553    345679999999999999999998753            


Q ss_pred             ----CCceEEEEeccCCCCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEe
Q 039392           68 ----EEFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLS  142 (285)
Q Consensus        68 ----~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~  142 (285)
                          ....++|||++++++|.+++... ...++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEEC
Confidence                45588999999999999999654 345899999999999999999999   9999999999999999999999999


Q ss_pred             eeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCC
Q 039392          143 DFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPI  222 (285)
Q Consensus       143 df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~  222 (285)
                      |||++.......   ......+++.|+|||.+.+..++.++||||||+++++|++|..|+.....   ....    ....
T Consensus       165 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~----~~~~  234 (284)
T 2a19_B          165 DFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK---FFTD----LRDG  234 (284)
T ss_dssp             CCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH---HHHH----HHTT
T ss_pred             cchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH---HHHH----hhcc
Confidence            999998765432   12344688999999999988899999999999999999999988643211   0000    0000


Q ss_pred             CccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          223 STKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                      .                  .+...+..+.+++.+||..||.+|||+++++++|+.++++.
T Consensus       235 ~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          235 I------------------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             C------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             c------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence            0                  01234566889999999999999999999999999987654


No 192
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=7e-45  Score=308.11  Aligned_cols=263  Identities=24%  Similarity=0.281  Sum_probs=201.3

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCC-----CCccccccceeccCCceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-----HRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v   74 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++... ......+..|+++++.+.     ||||+++++++...+..++|
T Consensus        36 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv  114 (360)
T 3llt_A           36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLI  114 (360)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEE
T ss_pred             EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEE
Confidence            478899999999999999975 57899999998643 334456777999999886     99999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC------------------
Q 039392           75 LEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD------------------  135 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~------------------  135 (285)
                      ||++ +++|.+++.... ..++...++.++.||+.||.|||   ++|++|+||||+||+++.                  
T Consensus       115 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~  190 (360)
T 3llt_A          115 FEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKK  190 (360)
T ss_dssp             ECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCE
T ss_pred             EcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhccccccc
Confidence            9999 889999987654 34899999999999999999999   999999999999999975                  


Q ss_pred             -------CCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCcccccc
Q 039392          136 -------NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNG  208 (285)
Q Consensus       136 -------~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~  208 (285)
                             ++.++|+|||++......     .....+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus       191 ~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  265 (360)
T 3llt_A          191 IQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM  265 (360)
T ss_dssp             EEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHH
Confidence                   889999999999865432     23456899999999999999999999999999999999999999764322


Q ss_pred             chhhhhhhhhhcCCCcc-----------cccccc----ccCcccch-----------hhhhhHhHHHHHHhhhcccccCc
Q 039392          209 EMTLKHWVNDWLPISTK-----------EIVDPN----LLSREDIH-----------FVAKEQCVSFVFNVAMECTVESP  262 (285)
Q Consensus       209 ~~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~~p  262 (285)
                      +. .........+.+..           ......    ..+.....           .......++.+.+|+.+||+.||
T Consensus       266 ~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  344 (360)
T 3llt_A          266 EH-LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP  344 (360)
T ss_dssp             HH-HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSG
T ss_pred             HH-HHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCCh
Confidence            11 11111111111100           000000    00000000           00011223678899999999999


Q ss_pred             CCCCCHHHHHHH
Q 039392          263 EQRINAKEIVTK  274 (285)
Q Consensus       263 ~~Rps~~eil~~  274 (285)
                      .+|||++|+|++
T Consensus       345 ~~Rpta~elL~h  356 (360)
T 3llt_A          345 TLRPSPAELLKH  356 (360)
T ss_dssp             GGSCCHHHHTTS
T ss_pred             hhCCCHHHHhcC
Confidence            999999999863


No 193
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.8e-45  Score=308.12  Aligned_cols=261  Identities=20%  Similarity=0.281  Sum_probs=200.3

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCccccccceecc--CCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKVISSCSN--EEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~--~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++....   .+.+.+|+++++.++ ||||+++++++..  ....++|||
T Consensus        37 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             ceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            478899999999999999974 578999999987443   356778999999997 9999999999987  667899999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-cEEEeeeccceecCcccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~-~~~i~df~~~~~~~~~~~  155 (285)
                      ++.+++|.+++..    ++...++.++.|++.||.|||   ++|++|+||||+||+++.++ .++|+|||++....... 
T Consensus       114 ~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-  185 (330)
T 3nsz_A          114 HVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-  185 (330)
T ss_dssp             CCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC-
T ss_pred             ccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC-
Confidence            9999999998853    888899999999999999999   99999999999999999766 89999999998765432 


Q ss_pred             cceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcC-------------
Q 039392          156 STIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLP-------------  221 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-------------  221 (285)
                        ......++..|+|||.+.+ ..++.++||||||+++++|++|..||...................             
T Consensus       186 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (330)
T 3nsz_A          186 --EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  263 (330)
T ss_dssp             --CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             --ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence              2234568889999999877 678999999999999999999999995543322221111110000             


Q ss_pred             CC--ccccccccccC--cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          222 IS--TKEIVDPNLLS--REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       222 ~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ..  ...........  ...........+++++.+|+.+||..||.+|||++|++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00  00000000000  0001111133467889999999999999999999999874


No 194
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=5.5e-45  Score=309.81  Aligned_cols=260  Identities=22%  Similarity=0.207  Sum_probs=192.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccCC------ce
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE------FK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~   71 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++....      ..
T Consensus        26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  105 (371)
T 2xrw_A           26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV  105 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred             heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence            478899999999999999975 46899999998753  2344567889999999999999999999987654      78


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ++|||++++ +|.+.+..   .++...++.++.||+.||.|||   ++|++|+||||+||+++.++.+||+|||++....
T Consensus       106 ~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          106 YIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             EEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             EEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            999999965 78887752   3889999999999999999999   9999999999999999999999999999998654


Q ss_pred             cccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC--------
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS--------  223 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~--------  223 (285)
                      ...   ......+++.|+|||.+.+..++.++||||||+++|+|++|..||.+...... ............        
T Consensus       179 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~  254 (371)
T 2xrw_A          179 TSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQ  254 (371)
T ss_dssp             --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTSC
T ss_pred             ccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHhh
Confidence            321   22345688999999999998999999999999999999999999976432211 111111000000        


Q ss_pred             -----------------ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          224 -----------------TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       224 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                       .........   .+.........+.++.+|+.+||..||.+|||++|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          255 PTVRTYVENRPKYAGYSFEKLFPDVL---FPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHHHHHHSSCCCCCCCHHHHSCGGG---SCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hHHHHHHhhCccccccchhhhccccc---CcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                             000000000   001111233457889999999999999999999999875


No 195
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=3.5e-46  Score=317.88  Aligned_cols=245  Identities=15%  Similarity=0.166  Sum_probs=190.0

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeecc---chhHHHHHHHHHH---HHccCCCCcccccc-------ceecc
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ---YGRVFKSFDVECE---MMKSIHHRNIIKVI-------SSCSN   67 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~---~~~~~~~~~~e~~---~l~~l~h~~i~~~~-------~~~~~   67 (285)
                      |++.+.||+|+||+||+|.. .+|+.||||++...   .....+.+.+|++   .++.++||||++++       +++..
T Consensus        75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~  154 (377)
T 3byv_A           75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  154 (377)
T ss_dssp             EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred             EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence            66789999999999999985 57999999998732   3445677889994   55555799999998       44443


Q ss_pred             CC-----------------ceEEEEeccCCCCHHHhhhcCCC------ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 039392           68 EE-----------------FKALVLEYMPHGSLEKYLHSSNY------ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC  124 (285)
Q Consensus        68 ~~-----------------~~~~v~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~  124 (285)
                      .+                 ..+++||++ +|+|.+++.....      .++...++.++.||+.||+|||   ++|++||
T Consensus       155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHr  230 (377)
T 3byv_A          155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHT  230 (377)
T ss_dssp             TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred             cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence            32                 378999999 5699999875432      2335788889999999999999   9999999


Q ss_pred             CCCCCCeeeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCC-----------ccCcchhhHHHHHHHH
Q 039392          125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-----------RVSANGDVYSFGIMLI  193 (285)
Q Consensus       125 di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-----------~~~~~~Di~slG~~l~  193 (285)
                      ||||+||+++.++.+||+|||++.....     ......+ +.|+|||.+.+.           .++.++||||||+++|
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence            9999999999999999999999986443     1233456 889999998877           7999999999999999


Q ss_pred             HHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH
Q 039392          194 ETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT  273 (285)
Q Consensus       194 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~  273 (285)
                      +|++|..||...........             ..            .....+++++.+++.+||..||.+|||++++++
T Consensus       305 elltg~~Pf~~~~~~~~~~~-------------~~------------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          305 WIWCADLPITKDAALGGSEW-------------IF------------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHSSCCC------CCSGG-------------GG------------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHCCCCCcccccccchhh-------------hh------------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            99999999865322111000             00            001245677999999999999999999999996


Q ss_pred             --HHHHHHHH
Q 039392          274 --KLVKIRDS  281 (285)
Q Consensus       274 --~l~~l~~~  281 (285)
                        .++.+++.
T Consensus       360 hp~f~~~~~~  369 (377)
T 3byv_A          360 TPEYEQLRTE  369 (377)
T ss_dssp             SHHHHHHHHH
T ss_pred             ChHHHHHHHH
Confidence              45555543


No 196
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2e-45  Score=331.17  Aligned_cols=253  Identities=25%  Similarity=0.374  Sum_probs=202.9

Q ss_pred             ceecccCceEEEEEEe---CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCC
Q 039392            6 NLIGRGGFGSVFKARL---GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         6 ~~lg~G~~~~v~~~~~---~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      +.||+|+||.||+|..   .+++.||||+++...  ....+.+.+|++++++++||||+++++++.. +..++|||++++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999953   356889999987543  3345778999999999999999999999965 457899999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc-ccee
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI-STIQ  159 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~-~~~~  159 (285)
                      ++|.+++.... .++...++.++.||+.||.|||   ++|++||||||+||+++.++.+||+|||++........ ....
T Consensus       454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~  529 (635)
T 4fl3_A          454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  529 (635)
T ss_dssp             EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred             CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence            99999997654 4899999999999999999999   99999999999999999999999999999987654321 1222


Q ss_pred             ccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccc
Q 039392          160 TQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDI  238 (285)
Q Consensus       160 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
                      ....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+....+.... .... .                  
T Consensus       530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~-i~~~-~------------------  589 (635)
T 4fl3_A          530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-LEKG-E------------------  589 (635)
T ss_dssp             -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTT-C------------------
T ss_pred             cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcC-C------------------
Confidence            33446778999999998899999999999999999998 9999976433221111 1000 0                  


Q ss_pred             hhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          239 HFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                      ....+..++.++.++|.+||..||.+|||++++++.|+++..++.
T Consensus       590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence            011133567789999999999999999999999999999988765


No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=3.1e-45  Score=309.28  Aligned_cols=269  Identities=21%  Similarity=0.308  Sum_probs=201.6

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch--hHHHHHHHHHHHHccCCCCccccccceecc--------CC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISSCSN--------EE   69 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~   69 (285)
                      +|++.+.||+|+||.||+|.. .+|+.||+|++.....  .....+.+|+.+++.++||||+++++++..        .+
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   97 (351)
T 3mi9_A           18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG   97 (351)
T ss_dssp             GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred             ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence            478899999999999999986 5789999999865432  223467789999999999999999999866        44


Q ss_pred             ceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392           70 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus        70 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      ..++|||++++ +|.+.+......++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++..
T Consensus        98 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A           98 SIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARA  173 (351)
T ss_dssp             EEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence            68999999976 788877766566999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCcccc--cceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc-
Q 039392          150 LTREDI--STIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-  225 (285)
Q Consensus       150 ~~~~~~--~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-  225 (285)
                      ......  ........+++.|+|||.+.+ ..++.++||||||+++++|++|..||.+...... .............. 
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~  252 (351)
T 3mi9_A          174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITPEV  252 (351)
T ss_dssp             CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTT
T ss_pred             ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhh
Confidence            653221  122234567999999998876 4689999999999999999999999976433222 11111111111100 


Q ss_pred             --c-----cccccc-cCcc---cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          226 --E-----IVDPNL-LSRE---DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       226 --~-----~~~~~~-~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                        .     ...... ....   ..........++++.+|+.+||..||.+|||++|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence              0     000000 0000   00111112236779999999999999999999999874


No 198
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=4.2e-46  Score=330.33  Aligned_cols=253  Identities=26%  Similarity=0.431  Sum_probs=207.0

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEeccCCC
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      |++.+.||+|+||.||+|.+.++..||||++..... ..+.+.+|++++++++|+||+++++++.. +..++|||++.++
T Consensus       269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g  346 (535)
T 2h8h_A          269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  346 (535)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred             hhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence            567789999999999999988788899999875432 34678899999999999999999999876 6688999999999


Q ss_pred             CHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           82 SLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        82 ~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      +|.+++... ...++...++.++.||+.||.|||   +++++||||+|+||+++.++.+||+|||++....... .....
T Consensus       347 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~  422 (535)
T 2h8h_A          347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQ  422 (535)
T ss_dssp             EHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HHTTC
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-eeccc
Confidence            999999753 234889999999999999999999   9999999999999999999999999999998665422 11122


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCcccch
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIH  239 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (285)
                      ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+.. ......                   .+
T Consensus       423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~-~~i~~~-------------------~~  482 (535)
T 2h8h_A          423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERG-------------------YR  482 (535)
T ss_dssp             STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHH-HHHHTT-------------------CC
T ss_pred             CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcC-------------------CC
Confidence            3446778999999988899999999999999999999 89998764332211 111000                   00


Q ss_pred             hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHH
Q 039392          240 FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRD  280 (285)
Q Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~  280 (285)
                      ...+..++.++.++|.+||..||.+|||++++++.|+++..
T Consensus       483 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            11133567789999999999999999999999999987753


No 199
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=4.6e-45  Score=301.38  Aligned_cols=249  Identities=24%  Similarity=0.333  Sum_probs=202.5

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---------hhHHHHHHHHHHHHccCC-CCccccccceeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---------GRVFKSFDVECEMMKSIH-HRNIIKVISSCSNEE   69 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~   69 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++....         ....+.+.+|+++++++. ||||+++++++....
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT   97 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence            4788999999999999999764 68999999987542         233466788999999995 999999999999999


Q ss_pred             ceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392           70 FKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus        70 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      ..++|||++++++|.+++.... .++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||++..
T Consensus        98 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  173 (298)
T 1phk_A           98 FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  173 (298)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence            9999999999999999997654 4899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCcccccceeccccccccccCCcccC------CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC
Q 039392          150 LTREDISTIQTQTLATIGYMAPEYGK------EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~PE~~~------~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      .....   ......+++.|+|||.+.      ...++.++||||||+++++|++|..||........ ........... 
T Consensus       174 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~-  248 (298)
T 1phk_A          174 LDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-LRMIMSGNYQF-  248 (298)
T ss_dssp             CCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCC-
T ss_pred             cCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH-HHHHhcCCccc-
Confidence            65432   223456888999999874      45688999999999999999999999865332211 11111110000 


Q ss_pred             ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH
Q 039392          224 TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT  273 (285)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~  273 (285)
                                     .......++.++.+++.+||..||.+|||++++++
T Consensus       249 ---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          249 ---------------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             ---------------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ---------------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence                           00112356778999999999999999999999986


No 200
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7e-46  Score=313.47  Aligned_cols=253  Identities=23%  Similarity=0.311  Sum_probs=200.6

Q ss_pred             CCCCCceecccCceEEEEEEe----CCCcEEEEEEeeccc----hhHHHHHHHHHHHHccC-CCCccccccceeccCCce
Q 039392            1 GFSENNLIGRGGFGSVFKARL----GDGMEVAVKVFNLQY----GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~----~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   71 (285)
                      +|++.+.||+|+||.||+++.    .+++.||+|++....    ....+.+.+|+++++.+ +||||+++++++......
T Consensus        55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  134 (355)
T 1vzo_A           55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL  134 (355)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred             ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceE
Confidence            477889999999999999976    478999999986432    22335566799999999 699999999999999999


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ++||||+++++|.+++.... .++...++.++.||+.||.|||   ++|++|+||||+||+++.++.++|+|||++....
T Consensus       135 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          135 HLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             EEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence            99999999999999987654 3899999999999999999999   9999999999999999999999999999998765


Q ss_pred             cccccceeccccccccccCCcccCCC--ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKEG--RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .... .......+|+.|+|||.+.+.  .++.++||||||+++|+|++|..||........... ........       
T Consensus       211 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~-------  281 (355)
T 1vzo_A          211 ADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE-ISRRILKS-------  281 (355)
T ss_dssp             GGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH-HHHHHHHC-------
T ss_pred             cCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHH-HHHHHhcc-------
Confidence            4321 122345689999999998753  578999999999999999999999975332211111 11000000       


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCC-----CHHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRI-----NAKEIVTKL  275 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-----s~~eil~~l  275 (285)
                               ....+..++..+.+++.+||..||.+||     |+++++++.
T Consensus       282 ---------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          282 ---------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             ---------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             ---------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence                     0001234566789999999999999999     999998753


No 201
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=3.6e-45  Score=310.09  Aligned_cols=266  Identities=21%  Similarity=0.253  Sum_probs=196.7

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccc-----------hhHHHHHHHHHHHHccCCCCcccccccee----
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY-----------GRVFKSFDVECEMMKSIHHRNIIKVISSC----   65 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----   65 (285)
                      +|++.+.||+|+||.||+|...+|+.||+|.+....           ....+.+.+|+++++.++||||+++++++    
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  102 (362)
T 3pg1_A           23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE  102 (362)
T ss_dssp             SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC
T ss_pred             ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc
Confidence            588999999999999999988789999999885432           22346788999999999999999999998    


Q ss_pred             -ccCCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeee
Q 039392           66 -SNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDF  144 (285)
Q Consensus        66 -~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df  144 (285)
                       ......++|||++. ++|.+.+......++...++.++.||+.||.|||   ++|++|+||||+||+++.++.++|+||
T Consensus       103 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          103 EPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             TTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred             CCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEEec
Confidence             33456899999997 4888888776666999999999999999999999   999999999999999999999999999


Q ss_pred             ccceecCcccccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC
Q 039392          145 GIAKLLTREDISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS  223 (285)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      |++.......   ......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||......... ...........
T Consensus       179 g~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~i~~~~~~~~  254 (362)
T 3pg1_A          179 NLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL-NKIVEVVGTPK  254 (362)
T ss_dssp             TC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCC
T ss_pred             Cccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHcCCCC
Confidence            9997544322   2234567889999998877 67899999999999999999999999764322211 11111111110


Q ss_pred             cc-----------ccccccccCc-ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          224 TK-----------EIVDPNLLSR-EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       224 ~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ..           .......... ...........++.+.+++.+||..||.+|||+++++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            00           0000000000 001111223457789999999999999999999999874


No 202
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=3.9e-46  Score=304.99  Aligned_cols=251  Identities=22%  Similarity=0.311  Sum_probs=200.5

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCcccccccee--ccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSC--SNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--~~~~~~~~v~   75 (285)
                      +|++.+.||+|+||.||++... +++.||+|.+....  ....+.+.+|+++++.++||||+++++++  ......++||
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~   86 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM   86 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred             heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence            4788999999999999999754 78999999987543  34556788999999999999999999987  4567899999


Q ss_pred             eccCCCCHHHhhhcC---CCccCHHHHHHHHHHHHHHHHHHhcCCCCC-----eeecCCCCCCeeeCCCCcEEEeeeccc
Q 039392           76 EYMPHGSLEKYLHSS---NYILDIYQRLNIMIDVASTLEYLHFGYSAQ-----VIHCDLKPSNVLLDDNMVAHLSDFGIA  147 (285)
Q Consensus        76 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~-----~~h~di~~~nili~~~~~~~i~df~~~  147 (285)
                      |++++++|.+++...   ...++...++.++.|++.||.+||   +.+     ++|+||+|+||+++.++.++|+|||++
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~  163 (279)
T 2w5a_A           87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  163 (279)
T ss_dssp             ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred             eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence            999999999998653   234899999999999999999999   777     999999999999999999999999999


Q ss_pred             eecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccc
Q 039392          148 KLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI  227 (285)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                      .......  .......+++.|+|||.+.+..++.++||||||+++++|++|..||......+.. .........      
T Consensus       164 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~i~~~~~~------  234 (279)
T 2w5a_A          164 RILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA-GKIREGKFR------  234 (279)
T ss_dssp             HHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHTCCC------
T ss_pred             eeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHH-HHHhhcccc------
Confidence            7665432  1112345788999999999888999999999999999999999999764322111 111111000      


Q ss_pred             ccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHH
Q 039392          228 VDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLV  276 (285)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~  276 (285)
                                   ..+..++.++.+++.+||..||.+|||++++++++.
T Consensus       235 -------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          235 -------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             -------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             -------------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence                         012245677999999999999999999999998653


No 203
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=9.4e-47  Score=312.13  Aligned_cols=266  Identities=24%  Similarity=0.369  Sum_probs=187.5

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHcc--CCCCccccccceeccCC----ceEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKS--IHHRNIIKVISSCSNEE----FKALV   74 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~~v   74 (285)
                      +|++.+.||+|+||.||+|.. +++.||+|++....   ...+.+|.+++..  ++||||+++++++....    ..++|
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   79 (303)
T 3gxj_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred             eeeehhhccCCCCeEEEEEEE-cCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence            489999999999999999976 48999999986442   2456678888887  78999999999987766    78999


Q ss_pred             EeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392           75 LEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG-----YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-----~~~~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      ||++++++|.+++....  ++...++.++.|++.||.|||..     ++.|++|+||||+||+++.++.++|+|||++..
T Consensus        80 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~  157 (303)
T 3gxj_A           80 SDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             EECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CC
T ss_pred             EeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCccee
Confidence            99999999999996643  77888899999999999999932     257999999999999999999999999999976


Q ss_pred             cCcccccc--eeccccccccccCCcccCCC------ccCcchhhHHHHHHHHHHhhC----------CCCCccccccchh
Q 039392          150 LTREDIST--IQTQTLATIGYMAPEYGKEG------RVSANGDVYSFGIMLIETFTR----------KKPTDEIFNGEMT  211 (285)
Q Consensus       150 ~~~~~~~~--~~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~~l~~ll~g----------~~p~~~~~~~~~~  211 (285)
                      ........  ......+|+.|+|||.+.+.      .++.++||||||+++|+|++|          ..||.........
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3gxj_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCC
T ss_pred             ccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCcc
Confidence            54432211  12334689999999988776      455789999999999999999          5555432221111


Q ss_pred             hhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          212 LKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      .........        ........ ........+++.+.+++.+||..||.+|||++++++.|+++.++
T Consensus       238 ~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~  298 (303)
T 3gxj_A          238 VEEMRKVVC--------EQKLRPNI-PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CC-CHHHHT--------TSCCCCCC-CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred             HHHHHHHHH--------HhhcCCCc-cccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence            111111000        00001111 11112336677899999999999999999999999999987643


No 204
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=3.4e-45  Score=307.76  Aligned_cols=249  Identities=25%  Similarity=0.324  Sum_probs=197.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHH-HccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-GRVFKSFDVECEM-MKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||+||+|.. .+|+.||||++.... ......+..|..+ ++.++||||+++++++...+..++|||+
T Consensus        52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~  131 (340)
T 3an0_A           52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL  131 (340)
T ss_dssp             CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred             heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence            467789999999999999985 579999999987543 2233444455554 7888999999999999999999999999


Q ss_pred             cCCCCHHHhhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           78 MPHGSLEKYLHS---SNYILDIYQRLNIMIDVASTLEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        78 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~-~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      +++ +|.+++..   ....+++..++.++.||+.||.|||   ++ |++|+||+|+||+++.++.++|+|||++......
T Consensus       132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  207 (340)
T 3an0_A          132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS  207 (340)
T ss_dssp             CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred             hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence            976 99888764   3455999999999999999999999   76 9999999999999999999999999999766432


Q ss_pred             cccceeccccccccccCCcccC----CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          154 DISTIQTQTLATIGYMAPEYGK----EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       154 ~~~~~~~~~~~~~~~~~PE~~~----~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      .   ......+++.|+|||.+.    ...++.++||||||+++|+|++|..||....................       
T Consensus       208 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------  277 (340)
T 3an0_A          208 V---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ-------  277 (340)
T ss_dssp             H---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-------
T ss_pred             c---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCC-------
Confidence            1   122346889999999864    34789999999999999999999999976433322222221111000       


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                 .....++.++.+++.+||..||.+|||+++++++
T Consensus       278 -----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  311 (340)
T 3an0_A          278 -----------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  311 (340)
T ss_dssp             -----------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             -----------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence                       0022456779999999999999999999999874


No 205
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=299.83  Aligned_cols=249  Identities=19%  Similarity=0.289  Sum_probs=198.8

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc----hhHHHHHHHHHHHHccCCCCcccccccee--ccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY----GRVFKSFDVECEMMKSIHHRNIIKVISSC--SNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--~~~~~~~~   73 (285)
                      +|++.+.||+|+||.||++.. .+++.+|+|++....    ....+.+.+|+++++.++||||+++++++  ......++
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM   85 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred             ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence            589999999999999999985 468999999987543    23456788999999999999999999998  45568899


Q ss_pred             EEeccCCCCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           74 VLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      |||++.++ |.+++... ...++...++.++.|++.||.|||   ++|++|+||+|+||+++.++.++|+|||++.....
T Consensus        86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            99999775 77766543 345899999999999999999999   99999999999999999999999999999987754


Q ss_pred             ccccceeccccccccccCCcccCCCc--cCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          153 EDISTIQTQTLATIGYMAPEYGKEGR--VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      ...........+++.|+|||.+.+..  .+.++||||||+++++|++|..||......+. .........          
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~i~~~~~----------  230 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL-FENIGKGSY----------  230 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCC----------
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH-HHHHhcCCC----------
Confidence            33333344566899999999887643  47899999999999999999999975322111 111111000          


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                ..+..++..+.+++.+||..||.+|||+++++++
T Consensus       231 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          231 ----------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             ----------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ----------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                      0122456678999999999999999999999975


No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=8.2e-45  Score=300.04  Aligned_cols=267  Identities=24%  Similarity=0.314  Sum_probs=201.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccch--hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++.....  ...+.+.+|+++++.++||||+++++++...+..++|||+
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (299)
T 2r3i_A            4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   83 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence            5888999999999999999864 789999999865432  2235677899999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           78 MPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        78 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      +. ++|.+++.... ..++...++.++.|++.||.+||   +.|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        84 ~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--  157 (299)
T 2r3i_A           84 LH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--  157 (299)
T ss_dssp             CS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS--
T ss_pred             cc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc--
Confidence            97 49999886653 34889999999999999999999   9999999999999999999999999999997664322  


Q ss_pred             ceeccccccccccCCcccCCCc-cCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccc-------
Q 039392          157 TIQTQTLATIGYMAPEYGKEGR-VSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV-------  228 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  228 (285)
                      .......+++.|+|||.+.+.. ++.++||||||+++++|++|..||......+.... ..............       
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  236 (299)
T 2r3i_A          158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGTPDEVVWPGVTSMPD  236 (299)
T ss_dssp             BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCCCCTTTSTTGGGSTT
T ss_pred             cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHH-HHHHhCCCchhhhhHhhcCcc
Confidence            1223446788999999987765 79999999999999999999999976433222111 11111111000000       


Q ss_pred             -cccccCcccchh-hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          229 -DPNLLSREDIHF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       229 -~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                       ...........+ ......+.++.+++.+||..||++|||+++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h  284 (299)
T 2r3i_A          237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  284 (299)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence             000000000000 1123457789999999999999999999999873


No 207
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=1.3e-45  Score=313.74  Aligned_cols=257  Identities=11%  Similarity=0.117  Sum_probs=184.5

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHH---HHHccCCCCccccccc-------eecc
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVEC---EMMKSIHHRNIIKVIS-------SCSN   67 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~---~~l~~l~h~~i~~~~~-------~~~~   67 (285)
                      |++.+.||+|+||+||+|.+ .+++.||+|++....   ....+.+.+|+   ..++. +||||++++.       ++..
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEE
T ss_pred             eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheec
Confidence            67889999999999999985 478999999998643   23445677774   45555 7999887553       3322


Q ss_pred             C-----------------CceEEEEeccCCCCHHHhhhcCCCccCHHHH------HHHHHHHHHHHHHHhcCCCCCeeec
Q 039392           68 E-----------------EFKALVLEYMPHGSLEKYLHSSNYILDIYQR------LNIMIDVASTLEYLHFGYSAQVIHC  124 (285)
Q Consensus        68 ~-----------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~------~~~~~~l~~~l~~lh~~~~~~~~h~  124 (285)
                      .                 ...++||||++ ++|.+++...+..++...+      +.++.||+.||+|||   ++|++||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHr  218 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHG  218 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccC
Confidence            1                 34799999998 7999999765443455555      677799999999999   9999999


Q ss_pred             CCCCCCeeeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCC--CccCcchhhHHHHHHHHHHhhCCCCC
Q 039392          125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGIMLIETFTRKKPT  202 (285)
Q Consensus       125 di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Di~slG~~l~~ll~g~~p~  202 (285)
                      ||||+||+++.+|.+||+|||++.......     ....+++.|+|||.+.+  ..++.++||||||+++|+|++|..||
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf  293 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF  293 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999998765321     13456689999999987  67999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH--HHHHHHH
Q 039392          203 DEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT--KLVKIRD  280 (285)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~--~l~~l~~  280 (285)
                      ............      ..      ...........+.....+++++.+++.+||..||.+|||++++++  .++++.+
T Consensus       294 ~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  361 (371)
T 3q60_A          294 GLVTPGIKGSWK------RP------SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQN  361 (371)
T ss_dssp             TBCCTTCTTCCC------BC------CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred             CCcCcccccchh------hh------hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence            775432211000      00      000001111112223456788999999999999999999999985  3444443


No 208
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=4.5e-45  Score=305.35  Aligned_cols=250  Identities=20%  Similarity=0.259  Sum_probs=198.5

Q ss_pred             CCCC-ceecccCceEEEEEEeC-CCcEEEEEEeeccch--hHHHHHHHHHHHHccCC-CCccccccceeccCCceEEEEe
Q 039392            2 FSEN-NLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIH-HRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         2 y~~~-~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      |.+. +.||+|+||.||+|... +++.||+|++.....  .....+.+|+.+++.+. ||||+++++++...+..++|||
T Consensus        30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e  109 (327)
T 3lm5_A           30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE  109 (327)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence            3344 78999999999999754 689999999875432  33567888999999985 7999999999999999999999


Q ss_pred             ccCCCCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCcEEEeeeccceecCc
Q 039392           77 YMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        77 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~---~~~~~i~df~~~~~~~~  152 (285)
                      ++++++|.+++... ...+++..++.++.|++.||.|||   ++|++|+||+|+||+++.   ++.++|+|||++.....
T Consensus       110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  186 (327)
T 3lm5_A          110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH  186 (327)
T ss_dssp             CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence            99999999988543 345899999999999999999999   999999999999999987   78999999999987654


Q ss_pred             ccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          153 EDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      ..   ......+++.|+|||.+.+..++.++||||||+++++|++|..||......+.... ........          
T Consensus       187 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~-i~~~~~~~----------  252 (327)
T 3lm5_A          187 AC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN-ISQVNVDY----------  252 (327)
T ss_dssp             ----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHTCCCC----------
T ss_pred             cc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH-HHhccccc----------
Confidence            32   12345689999999999999999999999999999999999999976433222111 11100000          


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                            .......+++.+.+++.+||..||.+|||+++++++
T Consensus       253 ------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          253 ------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             ------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             ------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence                  001123456779999999999999999999999864


No 209
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=4.5e-45  Score=331.01  Aligned_cols=246  Identities=20%  Similarity=0.268  Sum_probs=203.0

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc---hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY---GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      +|++++.||+|+||+||+|.. .+++.||||++....   ....+.+..|..++..+ +||+|+++++++...+.+|+||
T Consensus       342 ~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~  421 (674)
T 3pfq_A          342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM  421 (674)
T ss_dssp             TEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEE
T ss_pred             ceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEE
Confidence            477889999999999999975 468899999987532   23345677899999887 6999999999999999999999


Q ss_pred             eccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccc
Q 039392           76 EYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~  155 (285)
                      ||+++++|.+++..... +++..++.++.||+.||.|||   ++|++||||||+|||++.+|.+||+|||++....... 
T Consensus       422 E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-  496 (674)
T 3pfq_A          422 EYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-  496 (674)
T ss_dssp             ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-
T ss_pred             eCcCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC-
Confidence            99999999999977554 999999999999999999999   9999999999999999999999999999998643322 


Q ss_pred             cceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          156 STIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                       .......+|+.|+|||++.+..++.++|+||||+++|+|++|..||.+....+. .........               
T Consensus       497 -~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~~~---------------  559 (674)
T 3pfq_A          497 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEHNV---------------  559 (674)
T ss_dssp             -CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHSSCC---------------
T ss_pred             -cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH-HHHHHhCCC---------------
Confidence             123456789999999999999999999999999999999999999976432221 111111000               


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCH-----HHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINA-----KEIVT  273 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~eil~  273 (285)
                           ..+...+.++.+||++||..||.+||++     +++++
T Consensus       560 -----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          560 -----AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             -----CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             -----CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                 0123456779999999999999999997     77765


No 210
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=7.2e-45  Score=308.45  Aligned_cols=267  Identities=22%  Similarity=0.264  Sum_probs=202.5

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccC-----CceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNE-----EFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~~   73 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...     ...++
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i  107 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI  107 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence            478899999999999999975 478899999987533 34457788999999999999999999998654     46899


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |+|++.+ +|.+++....  ++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++......
T Consensus       108 v~e~~~~-~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  181 (364)
T 3qyz_A          108 VQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  181 (364)
T ss_dssp             EEECCSE-EHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             EEcccCc-CHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence            9999965 8999886643  899999999999999999999   999999999999999999999999999999877653


Q ss_pred             cccc-eeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc--
Q 039392          154 DIST-IQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD--  229 (285)
Q Consensus       154 ~~~~-~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  229 (285)
                      .... ......+++.|+|||.+.+ ..++.++||||||+++|+|++|..||.+....+.. .................  
T Consensus       182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~  260 (364)
T 3qyz_A          182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL-NHILGILGSPSQEDLNCII  260 (364)
T ss_dssp             GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH-HHHHHHHCSCCHHHHHTCC
T ss_pred             CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH-HHHHHHhCCCCHHHHHHhh
Confidence            2221 1234578999999997654 45899999999999999999999999765433221 11111111111100000  


Q ss_pred             --------ccccCcccch-hhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 --------PNLLSREDIH-FVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 --------~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                              .......... ......+++++.+|+.+||..||.+|||+++++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                    0000000000 01113457789999999999999999999999864


No 211
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=1.6e-45  Score=304.77  Aligned_cols=259  Identities=24%  Similarity=0.323  Sum_probs=185.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|||++
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   95 (303)
T 2vwi_A           16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLL   95 (303)
T ss_dssp             CCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECC
T ss_pred             hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhc
Confidence            588899999999999999974 468999999986543 334566788999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhc-------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           79 PHGSLEKYLHS-------SNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        79 ~~~~L~~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ++++|.+++..       ....++...++.++.|++.||.|||   ++|++|+||+|+||+++.++.++|+|||++....
T Consensus        96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  172 (303)
T 2vwi_A           96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLA  172 (303)
T ss_dssp             TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred             cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence            99999998864       2344899999999999999999999   9999999999999999999999999999987654


Q ss_pred             cccc---cceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccc
Q 039392          152 REDI---STIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI  227 (285)
Q Consensus       152 ~~~~---~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                      ....   ........+++.|+|||.+.+ ..++.++||||||+++++|++|..||..................... ...
T Consensus       173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~  251 (303)
T 2vwi_A          173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE-TGV  251 (303)
T ss_dssp             ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT-C--
T ss_pred             cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc-ccc
Confidence            3211   111234568889999998865 46899999999999999999999999765443322221111110000 000


Q ss_pred             ccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH
Q 039392          228 VDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT  273 (285)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~  273 (285)
                      .          .......++.++.+++.+||..||.+|||++++++
T Consensus       252 ~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          252 Q----------DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             -------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             c----------cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            0          00112345667999999999999999999999997


No 212
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=3.6e-45  Score=304.13  Aligned_cols=250  Identities=24%  Similarity=0.384  Sum_probs=194.8

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCC--CCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIH--HRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||.||++...+++.||+|++....  ....+.+.+|+++++.++  |+||+++++++......+++||
T Consensus        29 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e  108 (313)
T 3cek_A           29 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME  108 (313)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe
Confidence            378899999999999999998889999999986542  345577889999999997  5999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      + .+++|.+++.... .++...++.++.|++.||.|||   +.|++|+||+|+||+++ ++.++|+|||++.........
T Consensus       109 ~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~  182 (313)
T 3cek_A          109 C-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  182 (313)
T ss_dssp             C-CSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred             c-CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence            4 5779999997654 4889999999999999999999   99999999999999996 489999999999876554333


Q ss_pred             ceeccccccccccCCcccCC-----------CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKE-----------GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK  225 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~-----------~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                      .......+++.|+|||.+.+           ..++.++||||||+++++|++|..||....................   
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---  259 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI---  259 (313)
T ss_dssp             -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC---
T ss_pred             ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc---
Confidence            33344568999999998865           4688899999999999999999999976433222222111110000   


Q ss_pred             ccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          226 EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                     ..+...+.++.+++.+||..||.+|||+++++++
T Consensus       260 ---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          260 ---------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             ---------------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ---------------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence                           0012235668999999999999999999999875


No 213
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.4e-44  Score=315.55  Aligned_cols=261  Identities=17%  Similarity=0.193  Sum_probs=208.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCC-CccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHH-RNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||+|.+ .+++.||||++......  ..+.+|+++++.+.| +++..+..++......++|||++
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            488999999999999999985 57999999987654332  457789999999986 45555555667778889999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCcEEEeeeccceecCcccc
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili---~~~~~~~i~df~~~~~~~~~~~  155 (285)
                       +++|.+++......+++..++.++.||+.||.|||   ++|++|+||||+|||+   +.++.++|+|||++........
T Consensus        86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence             88999999876666999999999999999999999   9999999999999999   5889999999999987654322


Q ss_pred             c-----ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhh--hhhhhhhcCCCccccc
Q 039392          156 S-----TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTL--KHWVNDWLPISTKEIV  228 (285)
Q Consensus       156 ~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~  228 (285)
                      .     .......+++.|+|||.+.+..++.++||||||+++|+|++|..||..........  ..........      
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~------  235 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVAT------  235 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHS------
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccc------
Confidence            1     11225668999999999999999999999999999999999999998754322111  1110000000      


Q ss_pred             cccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          229 DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                               ........++.++.+++.+||..+|.+||+++++++.|+++....
T Consensus       236 ---------~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          236 ---------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             ---------CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ---------cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence                     000112455778999999999999999999999999999997643


No 214
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.6e-45  Score=311.00  Aligned_cols=261  Identities=23%  Similarity=0.285  Sum_probs=183.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc--chhHHHHHHHHHHHHccCCCCccccccceeccC------Cce
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ--YGRVFKSFDVECEMMKSIHHRNIIKVISSCSNE------EFK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~   71 (285)
                      +|++.+.||+|+||.||+|.. .+|+.||||++...  .....+.+.+|+.+++.++||||+++++++...      ...
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  109 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV  109 (367)
T ss_dssp             TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence            478899999999999999974 57899999998653  234456788999999999999999999998654      567


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      +++++++ +++|.+++...  .++...++.++.||+.||.|||   +.|++|+||||+||+++.++.+||+|||++....
T Consensus       110 ~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          110 YLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             EEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             EEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            8999999 67999888653  4899999999999999999999   9999999999999999999999999999998654


Q ss_pred             cccccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      ..     .....+++.|+|||.+.+ ..++.++|||||||++++|++|..||.+..... ............... ....
T Consensus       184 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~-~~~~  256 (367)
T 2fst_X          184 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAE-LLKK  256 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHH-HHTT
T ss_pred             cc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHH-HHHH
Confidence            32     234568899999998877 678999999999999999999999997643321 111111111111000 0000


Q ss_pred             -----------cccCcccchh-hhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 -----------NLLSREDIHF-VAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 -----------~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                 .........+ ......++++.+|+.+||..||.+|||++++|++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence                       0000000011 0112457789999999999999999999999874


No 215
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.5e-44  Score=308.49  Aligned_cols=267  Identities=23%  Similarity=0.312  Sum_probs=199.7

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceecc------------
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN------------   67 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------------   67 (285)
                      +|++.+.||+|+||+||+|.. .+|+.||+|++......    ..+|+++++.++||||+++++++..            
T Consensus         8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~   83 (383)
T 3eb0_A            8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP   83 (383)
T ss_dssp             TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred             eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence            478899999999999999975 57999999998654322    2369999999999999999998833            


Q ss_pred             --------------------------CCceEEEEeccCCCCHHHhhhc---CCCccCHHHHHHHHHHHHHHHHHHhcCCC
Q 039392           68 --------------------------EEFKALVLEYMPHGSLEKYLHS---SNYILDIYQRLNIMIDVASTLEYLHFGYS  118 (285)
Q Consensus        68 --------------------------~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~~  118 (285)
                                                ...+++|||++++ +|.+.+..   ....+++..++.++.||+.||.|||   +
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~  159 (383)
T 3eb0_A           84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---S  159 (383)
T ss_dssp             --------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred             cccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence                                      3348899999975 87776642   3445999999999999999999999   9


Q ss_pred             CCeeecCCCCCCeeeC-CCCcEEEeeeccceecCcccccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHh
Q 039392          119 AQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETF  196 (285)
Q Consensus       119 ~~~~h~di~~~nili~-~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll  196 (285)
                      +|++|+||||+||+++ .++.++|+|||++.......   ......+++.|+|||.+.+. .++.++||||+|+++++|+
T Consensus       160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  236 (383)
T 3eb0_A          160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI  236 (383)
T ss_dssp             TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence            9999999999999997 68999999999998765432   22345678899999988765 5899999999999999999


Q ss_pred             hCCCCCccccccchhhhhhhhhhcCCCc----------cccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCC
Q 039392          197 TRKKPTDEIFNGEMTLKHWVNDWLPIST----------KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRI  266 (285)
Q Consensus       197 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  266 (285)
                      +|..||.+....+. .............          .....+. ..........+...+.++.+|+.+||..||.+||
T Consensus       237 ~g~~pf~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (383)
T 3eb0_A          237 LGKPLFSGETSIDQ-LVRIIQIMGTPTKEQMIRMNPHYTEVRFPT-LKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI  314 (383)
T ss_dssp             HSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHHCTTC--CCCCC-CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             hCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhCcccccccCCc-cCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence            99999976433222 1111111111100          0000000 1111122223345678899999999999999999


Q ss_pred             CHHHHHHH--HHHHHH
Q 039392          267 NAKEIVTK--LVKIRD  280 (285)
Q Consensus       267 s~~eil~~--l~~l~~  280 (285)
                      |+.|++++  ++.+++
T Consensus       315 t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          315 NPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             CHHHHHTSGGGHHHHH
T ss_pred             CHHHHhcCHHHHHHHh
Confidence            99999953  555544


No 216
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=1e-44  Score=327.77  Aligned_cols=255  Identities=24%  Similarity=0.384  Sum_probs=204.4

Q ss_pred             CCCCceecccCceEEEEEEeC----CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            2 FSENNLIGRGGFGSVFKARLG----DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~----~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      |++.+.||+|+||.||+|...    .+..+|+|.+.... ....+.+.+|+.+++.++||||+++++++.+ +..++|||
T Consensus       392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv~E  470 (656)
T 2j0j_A          392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIME  470 (656)
T ss_dssp             EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEEEE
Confidence            567889999999999999753    25678999876533 3445778899999999999999999999854 56889999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      ++++++|.+++......++...++.++.|++.||.|||   ++|++||||||+||+++.++.++|+|||++........ 
T Consensus       471 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~-  546 (656)
T 2j0j_A          471 LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-  546 (656)
T ss_dssp             CCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc-
Confidence            99999999999876656899999999999999999999   99999999999999999999999999999987654321 


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccccccCc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSR  235 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (285)
                      .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.+....+.... .....                
T Consensus       547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~-i~~~~----------------  609 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGE----------------  609 (656)
T ss_dssp             -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-HHHTC----------------
T ss_pred             eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHcCC----------------
Confidence            12233456778999999988899999999999999999997 9999876433222111 11100                


Q ss_pred             ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          236 EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                         ....+..+++.+.+++.+||..||.+|||++++++.|+++.++
T Consensus       610 ---~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          610 ---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ---CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence               0011235677899999999999999999999999999999754


No 217
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=8e-45  Score=303.23  Aligned_cols=249  Identities=22%  Similarity=0.278  Sum_probs=195.8

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch--------hHHHHHHHHHHHHccCCCCccccccceeccCCce
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG--------RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   71 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.....        .....+.+|+++++.++||||+++++++.... .
T Consensus        11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~   89 (322)
T 2ycf_A           11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-Y   89 (322)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred             ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-e
Confidence            378899999999999999975 4689999999864321        22345778999999999999999999987665 8


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc---EEEeeeccce
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV---AHLSDFGIAK  148 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~---~~i~df~~~~  148 (285)
                      ++|||++++++|.+++.... .++...++.++.||+.||.|||   ++|++|+||+|+||+++.++.   ++|+|||++.
T Consensus        90 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           90 YIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             EEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             EEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            89999999999999886554 4899999999999999999999   999999999999999987654   9999999998


Q ss_pred             ecCcccccceeccccccccccCCcccC---CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc
Q 039392          149 LLTREDISTIQTQTLATIGYMAPEYGK---EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK  225 (285)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                      ......   ......+++.|+|||.+.   ...++.++||||||+++|+|++|..||...................    
T Consensus       166 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----  238 (322)
T 2ycf_A          166 ILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN----  238 (322)
T ss_dssp             ECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC----
T ss_pred             eccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc----
Confidence            765432   122345788999999863   5578999999999999999999999997643322211111111000    


Q ss_pred             ccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH
Q 039392          226 EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT  273 (285)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~  273 (285)
                                  ........++.++.+++.+||..||.+|||++++++
T Consensus       239 ------------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          239 ------------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             ------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ------------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence                        000112345778999999999999999999999985


No 218
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=8.6e-45  Score=298.15  Aligned_cols=242  Identities=19%  Similarity=0.267  Sum_probs=196.1

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +|++.+.||+|+||+||+|... +++.||+|++....  ......+.+|+..+..+ +||||+++++++...+..++|||
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e   91 (289)
T 1x8b_A           12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE   91 (289)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence            3778899999999999999864 79999999987532  33446677899999988 89999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCC---CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-----------------
Q 039392           77 YMPHGSLEKYLHSSN---YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN-----------------  136 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~-----------------  136 (285)
                      ++++++|.+++....   ..+++..++.++.||+.||.|||   ++|++|+||||+||+++.+                 
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~  168 (289)
T 1x8b_A           92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS  168 (289)
T ss_dssp             CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-------------------
T ss_pred             ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence            999999999987542   34899999999999999999999   9999999999999999844                 


Q ss_pred             --CcEEEeeeccceecCcccccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhh
Q 039392          137 --MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK  213 (285)
Q Consensus       137 --~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~  213 (285)
                        ..++|+|||.+......      ....+++.|+|||.+.+. .++.++||||||+++++|++|..|+....    ...
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~  238 (289)
T 1x8b_A          169 NKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----QWH  238 (289)
T ss_dssp             -CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----HHH
T ss_pred             CceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----HHH
Confidence              47999999999876543      223588999999998766 67789999999999999999988764321    111


Q ss_pred             hhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          214 HWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .......             .      ..+..+++++.+++.+||..||.+|||+++++++
T Consensus       239 ~~~~~~~-------------~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          239 EIRQGRL-------------P------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             HHHTTCC-------------C------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             HHHcCCC-------------C------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            1111000             0      0122356779999999999999999999999864


No 219
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=7.6e-45  Score=312.48  Aligned_cols=264  Identities=21%  Similarity=0.256  Sum_probs=181.9

Q ss_pred             CceecccCceEEEEEEeC---CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCcccccccee--ccCCceEEEEeccC
Q 039392            5 NNLIGRGGFGSVFKARLG---DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSC--SNEEFKALVLEYMP   79 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~---~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--~~~~~~~~v~e~~~   79 (285)
                      +++||+|+||+||+|...   +++.||+|++.....  ...+.+|+.+++.++||||+++++++  ......++||||+.
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            568999999999999853   578999999865432  24577899999999999999999999  45778999999996


Q ss_pred             CCCHHHhhhcC--------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCcEEEeeeccc
Q 039392           80 HGSLEKYLHSS--------NYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL----DDNMVAHLSDFGIA  147 (285)
Q Consensus        80 ~~~L~~~~~~~--------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili----~~~~~~~i~df~~~  147 (285)
                      + +|.+++...        ...+++..++.++.||+.||.|||   ++|++||||||+||++    +.++.++|+|||++
T Consensus       104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  179 (405)
T 3rgf_A          104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  179 (405)
T ss_dssp             E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred             C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence            5 888777532        123889999999999999999999   9999999999999999    67899999999999


Q ss_pred             eecCcccc-cceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccc--------hhhhhhhh
Q 039392          148 KLLTREDI-STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGE--------MTLKHWVN  217 (285)
Q Consensus       148 ~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~--------~~~~~~~~  217 (285)
                      ........ ........+|+.|+|||++.+. .++.++|||||||++|+|++|..||.......        ........
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~  259 (405)
T 3rgf_A          180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN  259 (405)
T ss_dssp             C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred             eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence            87654321 1223345689999999998874 58999999999999999999999997543211        11111111


Q ss_pred             hhcCCCccccccccccCc----------------ccchhh--hhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          218 DWLPISTKEIVDPNLLSR----------------EDIHFV--AKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~----------------~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .........+........                ......  .....+.++.+||.+||..||.+|||++|+|++
T Consensus       260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            111111111100000000                000000  001125678899999999999999999999874


No 220
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=9.6e-45  Score=310.99  Aligned_cols=264  Identities=20%  Similarity=0.226  Sum_probs=199.4

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCC--------CCccccccceec----c
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH--------HRNIIKVISSCS----N   67 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~--------h~~i~~~~~~~~----~   67 (285)
                      .|++.+.||+|+||+||+|.. .+++.||+|++... ....+.+.+|+++++.++        |+||+++++.+.    .
T Consensus        38 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~  116 (397)
T 1wak_A           38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN  116 (397)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred             eEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence            378899999999999999975 46899999998744 344567788999998885        788999999987    5


Q ss_pred             CCceEEEEeccCCCCHHHhhhc-CCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCC--------
Q 039392           68 EEFKALVLEYMPHGSLEKYLHS-SNYILDIYQRLNIMIDVASTLEYLHFGYSA-QVIHCDLKPSNVLLDDNM--------  137 (285)
Q Consensus        68 ~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~-~~~h~di~~~nili~~~~--------  137 (285)
                      ....++|||++. +++.+.+.. ....++...++.++.||+.||.|||   ++ |++||||||+||+++.++        
T Consensus       117 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~  192 (397)
T 1wak_A          117 GTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAA  192 (397)
T ss_dssp             EEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred             CceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence            678999999994 466665544 3355999999999999999999999   87 999999999999999776        


Q ss_pred             -----------------------------------------cEEEeeeccceecCcccccceeccccccccccCCcccCC
Q 039392          138 -----------------------------------------VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE  176 (285)
Q Consensus       138 -----------------------------------------~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~  176 (285)
                                                               .++|+|||++......     .....+|+.|+|||++.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHT
T ss_pred             hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhcC
Confidence                                                     7999999999876543     234568999999999999


Q ss_pred             CccCcchhhHHHHHHHHHHhhCCCCCccccccchh-----hhhhhhhhcCCCcc---------ccccc--------cccC
Q 039392          177 GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMT-----LKHWVNDWLPISTK---------EIVDP--------NLLS  234 (285)
Q Consensus       177 ~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~---------~~~~~--------~~~~  234 (285)
                      ..++.++||||||+++|+|++|..||.........     ...........+..         .....        ....
T Consensus       268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (397)
T 1wak_A          268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP  347 (397)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred             CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence            89999999999999999999999999764432211     11111111110000         00000        0000


Q ss_pred             c-----ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          235 R-----EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       235 ~-----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .     ...........+.++.+|+.+||..||.+|||++|++++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence            0     000111235667889999999999999999999999864


No 221
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.4e-44  Score=301.20  Aligned_cols=267  Identities=22%  Similarity=0.282  Sum_probs=195.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceec-------------
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCS-------------   66 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------------   66 (285)
                      .|++.+.||+|+||.||+|... +++.||+|++........+.+.+|+++++.++||||+++++++.             
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   91 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL   91 (320)
T ss_dssp             TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred             ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence            4788999999999999999865 58999999998776677788899999999999999999998763             


Q ss_pred             -cCCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCcEEEeee
Q 039392           67 -NEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDF  144 (285)
Q Consensus        67 -~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~-~~~~~~i~df  144 (285)
                       .....++|||+++ ++|.+++...  .++...++.++.|++.||+|||   ++|++|+||+|+||+++ .++.++|+||
T Consensus        92 ~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           92 TELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             CSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             cccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence             4467899999997 5999998653  4889999999999999999999   99999999999999997 6779999999


Q ss_pred             ccceecCcccc-cceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCC
Q 039392          145 GIAKLLTREDI-STIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPI  222 (285)
Q Consensus       145 ~~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~  222 (285)
                      |++........ ........++..|+|||.+.+ ..++.++||||||+++++|++|..||......+. ...........
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~  244 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIPVV  244 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSCCC
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCC
Confidence            99987643211 112233456888999998765 6789999999999999999999999976433221 11111111110


Q ss_pred             Cccc----------cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          223 STKE----------IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       223 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ....          ...................++.++.+++.+||..||.+|||+++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            0000          000000000000011123467889999999999999999999999874


No 222
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.1e-44  Score=297.71  Aligned_cols=249  Identities=22%  Similarity=0.311  Sum_probs=200.8

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++....  ....+.+.+|++++++++||||+++++++......++|+|+
T Consensus        23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  102 (287)
T 2wei_A           23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL  102 (287)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEc
Confidence            3788999999999999999864 78999999986543  23456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC---CcEEEeeeccceecCccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTRED  154 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~---~~~~i~df~~~~~~~~~~  154 (285)
                      +++++|.+.+.... .++...++.++.|++.||.+||   ++|++|+||+|+||+++.+   +.++|+|||++.......
T Consensus       103 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A          103 YTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence            99999998886554 3899999999999999999999   9999999999999999754   479999999987664432


Q ss_pred             ccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccC
Q 039392          155 ISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLS  234 (285)
Q Consensus       155 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
                         ......+++.|+|||.+.+ .++.++|+||||+++++|++|..||......+. ..........             
T Consensus       179 ---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~-------------  240 (287)
T 2wei_A          179 ---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYA-------------  240 (287)
T ss_dssp             ---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCC-------------
T ss_pred             ---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHcCCCC-------------
Confidence               1123457888999998865 489999999999999999999999976432211 1111111000             


Q ss_pred             cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          235 REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                         ........++.++.+++.+||..||.+|||+++++++
T Consensus       241 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          241 ---FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             ---CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ---CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence               0111123557789999999999999999999999984


No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=2.5e-44  Score=297.47  Aligned_cols=251  Identities=24%  Similarity=0.339  Sum_probs=193.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceecc------------
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN------------   67 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------------   67 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+++++.++||||+++++++..            
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            478899999999999999985 47899999998643 4455778899999999999999999998743            


Q ss_pred             -CCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeecc
Q 039392           68 -EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGI  146 (285)
Q Consensus        68 -~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~  146 (285)
                       ....++|||++++++|.+++......++...++.++.|++.||.+||   ++|++|+||+|+||+++.++.++|+|||+
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             cCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence             45788999999999999999876666888999999999999999999   99999999999999999999999999999


Q ss_pred             ceecCcccc------------cceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhh
Q 039392          147 AKLLTREDI------------STIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLK  213 (285)
Q Consensus       147 ~~~~~~~~~------------~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~  213 (285)
                      +........            ........+++.|+|||.+.+. .++.++||||||+++|+|++   ||...........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~  239 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK  239 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHH
Confidence            986643210            1112345578899999998765 68999999999999999998   5543221111111


Q ss_pred             hhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          214 HWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      .........+                .......+..+.+++++||..||.+|||+++++++
T Consensus       240 ~~~~~~~~~~----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          240 KLRSVSIEFP----------------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHSTTCCCC----------------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hccccccccC----------------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            1111000000                00123456678999999999999999999999873


No 224
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.5e-44  Score=310.98  Aligned_cols=262  Identities=20%  Similarity=0.260  Sum_probs=198.4

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccC------CCCccccccceeccCCceEEE
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI------HHRNIIKVISSCSNEEFKALV   74 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~~v   74 (285)
                      |++.+.||+|+||+||+|.. .+++.||+|++... ......+.+|+.+++.+      +|+||+++++.+......++|
T Consensus        99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  177 (429)
T 3kvw_A           99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT  177 (429)
T ss_dssp             EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred             EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence            77889999999999999975 46899999998754 33345566777777766      578999999999999999999


Q ss_pred             EeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc--EEEeeeccceecC
Q 039392           75 LEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV--AHLSDFGIAKLLT  151 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~--~~i~df~~~~~~~  151 (285)
                      ||++. ++|.+++.... ..+++..++.++.||+.||.|||   +.|++||||||+||+++.++.  +||+|||++....
T Consensus       178 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             ECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             EeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence            99995 58998887654 34899999999999999999999   999999999999999999887  9999999997654


Q ss_pred             cccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc------
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK------  225 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------  225 (285)
                      ..     .....+++.|+|||++.+..++.++|||||||++|+|++|..||......+.. .............      
T Consensus       254 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l-~~i~~~~~~p~~~~~~~~~  327 (429)
T 3kvw_A          254 QR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQL-ACMIELLGMPSQKLLDASK  327 (429)
T ss_dssp             CC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHHHCCCCHHHHHTBT
T ss_pred             Cc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHcCCCCHHHHHhhh
Confidence            32     23456889999999999989999999999999999999999999765332211 1111110000000      


Q ss_pred             ---ccccc---------------c---------------ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHH
Q 039392          226 ---EIVDP---------------N---------------LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIV  272 (285)
Q Consensus       226 ---~~~~~---------------~---------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil  272 (285)
                         .++..               .               ...........+...++++.+||++||..||.+|||++|+|
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L  407 (429)
T 3kvw_A          328 RAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQAL  407 (429)
T ss_dssp             THHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHh
Confidence               00000               0               00000000011123367799999999999999999999998


Q ss_pred             HH
Q 039392          273 TK  274 (285)
Q Consensus       273 ~~  274 (285)
                      ++
T Consensus       408 ~H  409 (429)
T 3kvw_A          408 RH  409 (429)
T ss_dssp             TS
T ss_pred             CC
Confidence            74


No 225
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=4.7e-45  Score=304.20  Aligned_cols=257  Identities=20%  Similarity=0.323  Sum_probs=198.6

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEecc
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM   78 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   78 (285)
                      +|++.+.||+|+||.||+|...+  .+++|++....  ....+.+.+|+.+++.++||||+++++++......++++|++
T Consensus        34 ~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~  111 (319)
T 2y4i_B           34 QLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLC  111 (319)
T ss_dssp             CEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCC
T ss_pred             HeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecc
Confidence            47889999999999999998743  49999986532  223355678999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccc---c
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRED---I  155 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~---~  155 (285)
                      ++++|.+++......++...++.++.|++.||.+||   ++|++|+||+|+||+++ ++.++|+|||++.......   .
T Consensus       112 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~  187 (319)
T 2y4i_B          112 KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR  187 (319)
T ss_dssp             CSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred             cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence            999999999877666899999999999999999999   99999999999999998 6899999999987553211   1


Q ss_pred             cceeccccccccccCCcccCC---------CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccc
Q 039392          156 STIQTQTLATIGYMAPEYGKE---------GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE  226 (285)
Q Consensus       156 ~~~~~~~~~~~~~~~PE~~~~---------~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                      ........+++.|+|||.+.+         ..++.++||||||+++|+|++|..||........... ......+. .  
T Consensus       188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~-~--  263 (319)
T 2y4i_B          188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ-MGTGMKPN-L--  263 (319)
T ss_dssp             CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH-HHTTCCCC-C--
T ss_pred             ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-hccCCCCC-C--
Confidence            112233457889999998764         3578999999999999999999999976433222111 11110000 0  


Q ss_pred             cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHHH
Q 039392          227 IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDSL  282 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~~  282 (285)
                                     ....++.++.+++.+||..||.+|||++++++.|+++.+..
T Consensus       264 ---------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          264 ---------------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             ---------------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             ---------------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence                           01134556889999999999999999999999999987653


No 226
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=2e-44  Score=306.37  Aligned_cols=260  Identities=21%  Similarity=0.244  Sum_probs=195.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCce------
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFK------   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~------   71 (285)
                      +|.+.+.||+|+||+||+|.. .+|+.||+|++....  ......+.+|+.+++.++||||+++++++...+..      
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  122 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  122 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred             cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence            477889999999999999975 468999999987542  34456788999999999999999999999877654      


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ++|||++. ++|.+.+..   .++...++.++.|++.||.|||   +.|++|+||||+||+++.++.++|+|||++....
T Consensus       123 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          123 YLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             EEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             EEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            89999996 488887743   3899999999999999999999   9999999999999999999999999999998654


Q ss_pred             cccccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc-
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD-  229 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  229 (285)
                      ..     .....+++.|+|||.+.+ ..++.++||||||+++++|++|..||.+....+.. ........... ..... 
T Consensus       196 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~~~~~~~~-~~~~~~  268 (371)
T 4exu_A          196 AE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL-TQILKVTGVPG-TEFVQK  268 (371)
T ss_dssp             ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCC-HHHHTT
T ss_pred             cC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCc-HHHHHH
Confidence            32     234567899999998877 67899999999999999999999999764322221 11111111000 00000 


Q ss_pred             -----------ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 -----------PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 -----------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                 ................+++++.+|+.+||+.||.+|||+++++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                       000000000011123457889999999999999999999999864


No 227
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.5e-44  Score=300.73  Aligned_cols=249  Identities=25%  Similarity=0.343  Sum_probs=193.1

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceecc------CCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSN------EEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~~~   72 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|+.+++.+ +||||+++++++..      ....+
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~  103 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW  103 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred             cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence            477889999999999999986 4789999999875432 346678899999998 79999999999865      46789


Q ss_pred             EEEeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           73 LVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      +|||++++++|.+++.... ..++...++.++.||+.||.|||   +.|++|+||+|+||+++.++.++|+|||++....
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred             EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence            9999999999999987643 45889999999999999999999   9999999999999999999999999999987654


Q ss_pred             cccccceeccccccccccCCcccC-----CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccc
Q 039392          152 REDISTIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE  226 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                      ...  .......+++.|+|||.+.     +..++.++||||||+++|+|++|..||........... .... ....   
T Consensus       181 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~-~~~~---  253 (326)
T 2x7f_A          181 RTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-IPRN-PAPR---  253 (326)
T ss_dssp             ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-HHHS-CCCC---
T ss_pred             cCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-hhcC-cccc---
Confidence            321  1123446889999999886     45689999999999999999999999965432221111 1000 0000   


Q ss_pred             cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          227 IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                    .....++..+.+++.+||..||.+|||+++++++
T Consensus       254 --------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          254 --------------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             --------------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             --------------CCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                          0012345679999999999999999999999874


No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=7.7e-44  Score=300.90  Aligned_cols=267  Identities=23%  Similarity=0.239  Sum_probs=199.4

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccC-----CceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNE-----EFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~~   73 (285)
                      +|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++||||+++++++...     ...++
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l   91 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI   91 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred             ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence            5788999999999999999854 68999999986433 34456678999999999999999999987653     67899


Q ss_pred             EEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcc
Q 039392           74 VLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      +||++. ++|.+++...  .++...++.++.|++.||.|||   ++|++|+||||+||+++.++.++|+|||++......
T Consensus        92 v~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A           92 IQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             EECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             EEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence            999996 4899988763  3899999999999999999999   999999999999999999999999999999876543


Q ss_pred             cccc--------eeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCc
Q 039392          154 DIST--------IQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST  224 (285)
Q Consensus       154 ~~~~--------~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                      ....        ......+++.|+|||.+.+ ..++.++||||||+++++|++|..||......... ............
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~  244 (353)
T 2b9h_A          166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL-LLIFGIIGTPHS  244 (353)
T ss_dssp             --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCCS
T ss_pred             cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHHHHHhCCCch
Confidence            2111        1123467899999997654 67899999999999999999999999764322211 111111111000


Q ss_pred             cccccc-----------ccc-CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          225 KEIVDP-----------NLL-SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       225 ~~~~~~-----------~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ......           ... ............+++++.+++.+||..||++|||+++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            000000           000 00000001123567889999999999999999999999874


No 229
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.7e-44  Score=307.71  Aligned_cols=261  Identities=23%  Similarity=0.317  Sum_probs=193.9

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCC------ceEEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEE------FKALVL   75 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~~v~   75 (285)
                      |++.+.||+|+||+||+|....+..+|+|.+.....    ...+|+++++.++||||+++++++....      .+++||
T Consensus        42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~  117 (394)
T 4e7w_A           42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL  117 (394)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence            788999999999999999987666799998754322    1236999999999999999999984433      378999


Q ss_pred             eccCCCCHHHhhh---cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCcEEEeeeccceecC
Q 039392           76 EYMPHGSLEKYLH---SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        76 e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~-~~~~~~i~df~~~~~~~  151 (285)
                      ||+++ ++...+.   .....++...++.++.||+.||.|||   ++|++||||||+||+++ .++.+||+|||++....
T Consensus       118 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~  193 (394)
T 4e7w_A          118 EYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI  193 (394)
T ss_dssp             ECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence            99977 4443332   23445899999999999999999999   99999999999999998 89999999999998764


Q ss_pred             cccccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccc----
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE----  226 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----  226 (285)
                      ....   .....+++.|+|||.+.+. .++.++|||||||++|+|++|..||.+....+. ...............    
T Consensus       194 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~p~~~~~~~~  269 (394)
T 4e7w_A          194 AGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ-LVEIIKVLGTPSREQIKTM  269 (394)
T ss_dssp             TTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHH
T ss_pred             CCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhh
Confidence            4321   2345678999999988765 589999999999999999999999976433221 111111111111000    


Q ss_pred             ---cccc--cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          227 ---IVDP--NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       227 ---~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                         ....  ................++++.+|+.+||..||.+|||+.|++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence               0000  00111111122233467889999999999999999999999875


No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=6.3e-44  Score=298.24  Aligned_cols=266  Identities=24%  Similarity=0.332  Sum_probs=200.1

Q ss_pred             CCCCCceecccCceEEEEEEe--CCCcEEEEEEeeccchh--HHHHHHHHHHHHccC---CCCccccccceec-----cC
Q 039392            1 GFSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYGR--VFKSFDVECEMMKSI---HHRNIIKVISSCS-----NE   68 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~--~~~~~~~iK~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~~~~~~~-----~~   68 (285)
                      +|++.+.||+|+||.||+|..  .+++.||+|++......  ....+.+|+.+++.+   +||||+++++++.     ..
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   91 (326)
T 1blx_A           12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   91 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred             ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence            478899999999999999986  46889999998654321  123455677776665   8999999999986     56


Q ss_pred             CceEEEEeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccc
Q 039392           69 EFKALVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIA  147 (285)
Q Consensus        69 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~  147 (285)
                      ...++|||++. ++|.+++.... ..++...++.++.|++.||.|||   +.|++|+||+|+||+++.++.++|+|||++
T Consensus        92 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~  167 (326)
T 1blx_A           92 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA  167 (326)
T ss_dssp             EEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             ceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence            77899999997 59999887643 34899999999999999999999   999999999999999999999999999999


Q ss_pred             eecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccc
Q 039392          148 KLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEI  227 (285)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                      .......   ......+++.|+|||.+.+..++.++||||||+++++|++|..||......... ..............+
T Consensus       168 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          168 RIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKILDVIGLPGEEDW  243 (326)
T ss_dssp             CCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCCGGGS
T ss_pred             ccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHcCCCCcccC
Confidence            8765432   223456789999999999889999999999999999999999999764432221 111111111100000


Q ss_pred             ccc------cccCc-ccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          228 VDP------NLLSR-EDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       228 ~~~------~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ...      ..... ..........++.++.+++.+||..||.+|||+++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            000      00000 000011123567789999999999999999999999853


No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=7.6e-44  Score=299.03  Aligned_cols=263  Identities=19%  Similarity=0.266  Sum_probs=201.2

Q ss_pred             CCCCCceecccCceEEEEEEe--CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCC------ccccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL--GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHR------NIIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||+||+|..  .+++.||+|++... ....+.+.+|+++++.++|+      +++++++++...+..+
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~   93 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC   93 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence            478899999999999999975  36889999998643 34456678899988888655      4899999999999999


Q ss_pred             EEEeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC----------------
Q 039392           73 LVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD----------------  135 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~----------------  135 (285)
                      +|||++ +++|.+++.... ..++...++.++.|++.||.|||   ++|++|+||||+||+++.                
T Consensus        94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~  169 (339)
T 1z57_A           94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER  169 (339)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred             EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence            999999 779999887654 35889999999999999999999   999999999999999987                


Q ss_pred             ---CCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhh
Q 039392          136 ---NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTL  212 (285)
Q Consensus       136 ---~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~  212 (285)
                         ++.++|+|||++......     .....+++.|+|||.+.+..++.++||||||+++|+|++|..||......+. .
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~  243 (339)
T 1z57_A          170 TLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH-L  243 (339)
T ss_dssp             EESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH-H
T ss_pred             cccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH-H
Confidence               668999999999865432     2345688999999999998999999999999999999999999976433221 1


Q ss_pred             hhhhhhhcCCCcc--------ccccc--ccc--------------CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCH
Q 039392          213 KHWVNDWLPISTK--------EIVDP--NLL--------------SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINA  268 (285)
Q Consensus       213 ~~~~~~~~~~~~~--------~~~~~--~~~--------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~  268 (285)
                      ..........+..        .....  ...              .............++++.+++.+||..||.+|||+
T Consensus       244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  323 (339)
T 1z57_A          244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL  323 (339)
T ss_dssp             HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence            1111111111000        00000  000              00000011123557889999999999999999999


Q ss_pred             HHHHHH
Q 039392          269 KEIVTK  274 (285)
Q Consensus       269 ~eil~~  274 (285)
                      +|++++
T Consensus       324 ~ell~h  329 (339)
T 1z57_A          324 REALKH  329 (339)
T ss_dssp             HHHTTS
T ss_pred             HHHhcC
Confidence            999865


No 232
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.4e-43  Score=305.56  Aligned_cols=260  Identities=24%  Similarity=0.325  Sum_probs=193.5

Q ss_pred             CCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceecc------CCceEEE
Q 039392            2 FSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN------EEFKALV   74 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~~v   74 (285)
                      |++.+.||+|+||.||+|... +|+.||||.+.....    ...+|+++++.++||||+++++++..      ...+++|
T Consensus        56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv  131 (420)
T 1j1b_A           56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV  131 (420)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred             EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence            778899999999999999864 689999999865422    23369999999999999999998743      2346789


Q ss_pred             EeccCCCCHHHhhh---cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-CcEEEeeeccceec
Q 039392           75 LEYMPHGSLEKYLH---SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLL  150 (285)
Q Consensus        75 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~-~~~~i~df~~~~~~  150 (285)
                      |||+++ ++.+.+.   .....++...++.++.||+.||.|||   ++|++||||||+||+++.+ +.+||+|||++...
T Consensus       132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            999976 6666553   23445999999999999999999999   9999999999999999954 67899999999876


Q ss_pred             CcccccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCC------
Q 039392          151 TREDISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIS------  223 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~------  223 (285)
                      .....   .....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+....+ .............      
T Consensus       208 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~~~~~  283 (420)
T 1j1b_A          208 VRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIRE  283 (420)
T ss_dssp             CTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHHH
T ss_pred             ccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence            54321   2345679999999988765 78999999999999999999999997643222 1222211111110      


Q ss_pred             ----ccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          224 ----TKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       224 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                          ......+. ..............++++.+|+.+||..||.+|||+.|++++
T Consensus       284 ~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          284 MNPNYTEFKFPQ-IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HCSCCCCCCCCC-CCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hChhhhhhccCc-cCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                00010000 000111111123457889999999999999999999999864


No 233
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.2e-43  Score=296.80  Aligned_cols=252  Identities=25%  Similarity=0.301  Sum_probs=177.4

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch-hHHHHHHHHHH-HHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG-RVFKSFDVECE-MMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~-~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++..... .....+..|+. +++.++||||+++++++...+..++|||+
T Consensus        23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~  102 (327)
T 3aln_A           23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL  102 (327)
T ss_dssp             SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEee
Confidence            477889999999999999986 4789999999875432 23344445555 78888999999999999999999999999


Q ss_pred             cCCCCHHHhhhc----CCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           78 MPHGSLEKYLHS----SNYILDIYQRLNIMIDVASTLEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        78 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~-~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      +++ +|.+++..    ....++...++.++.|++.||.+||   +. |++|+||+|+||+++.++.++|+|||++.....
T Consensus       103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  178 (327)
T 3aln_A          103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD  178 (327)
T ss_dssp             CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred             cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence            976 88877653    2345899999999999999999999   88 999999999999999999999999999976654


Q ss_pred             ccccceeccccccccccCCccc----CCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccc
Q 039392          153 EDISTIQTQTLATIGYMAPEYG----KEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV  228 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~PE~~----~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                      ..   ......+++.|+|||.+    .+..++.++||||||+++++|++|..||................    ..    
T Consensus       179 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----~~----  247 (327)
T 3aln_A          179 SI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG----DP----  247 (327)
T ss_dssp             ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCS----CC----
T ss_pred             cc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcC----CC----
Confidence            32   12234688899999998    45668999999999999999999999997533211111100000    00    


Q ss_pred             cccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          229 DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                             ..........++.++.+++.+||..||.+|||+++++++
T Consensus       248 -------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          248 -------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             -------CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             -------CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence                   000000123456779999999999999999999999874


No 234
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=8e-44  Score=296.56  Aligned_cols=250  Identities=22%  Similarity=0.277  Sum_probs=183.0

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccch--hHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEec
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG--RVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLEY   77 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   77 (285)
                      +|++.+.||+|+||.||+|... +++.||+|++.....  ...+.+.++..+++.++||||+++++++...+..++|||+
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~  105 (318)
T 2dyl_A           26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL  105 (318)
T ss_dssp             GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence            4677899999999999999864 789999999875432  2233445556678888999999999999999999999999


Q ss_pred             cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           78 MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSA-QVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        78 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~-~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      + ++.+..+.......++...++.++.|++.||.|||   +. |++|+||+|+||+++.++.++|+|||++.......  
T Consensus       106 ~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--  179 (318)
T 2dyl_A          106 M-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--  179 (318)
T ss_dssp             C-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             c-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--
Confidence            9 55676666554556999999999999999999999   75 99999999999999999999999999997654422  


Q ss_pred             ceeccccccccccCCcccC-----CCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccccc
Q 039392          157 TIQTQTLATIGYMAPEYGK-----EGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPN  231 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~-----~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                       ......+++.|+|||.+.     ...++.++||||||+++++|++|..||....................         
T Consensus       180 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------  249 (318)
T 2dyl_A          180 -AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL---------  249 (318)
T ss_dssp             --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC---------
T ss_pred             -cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC---------
Confidence             123446888999999884     45688999999999999999999999976433322222222111110         


Q ss_pred             ccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          232 LLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                              +.....++.++.+++.+||..||.+|||+++++++
T Consensus       250 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          250 --------LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             --------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             --------CCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                    00112356679999999999999999999999874


No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.2e-43  Score=297.78  Aligned_cols=250  Identities=18%  Similarity=0.232  Sum_probs=172.1

Q ss_pred             CCCCC-ceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceecc----CCceEEE
Q 039392            1 GFSEN-NLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSN----EEFKALV   74 (285)
Q Consensus         1 ~y~~~-~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~~v   74 (285)
                      +|.+. +.||+|+||+||+|... +++.||+|++..... ...   +....++.+.||||+++++++..    ....++|
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  104 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLII  104 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence            36664 46999999999999764 799999999865322 112   23334566789999999999865    4558899


Q ss_pred             EeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCcEEEeeeccceec
Q 039392           75 LEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLL  150 (285)
Q Consensus        75 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~---~~~~~i~df~~~~~~  150 (285)
                      ||++++++|.+++.... ..+++..++.++.||+.||.|||   ++|++|+||+|+||+++.   ++.++|+|||++...
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~  181 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET  181 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence            99999999999997654 35999999999999999999999   999999999999999976   455999999999866


Q ss_pred             CcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          151 TREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      ....    .....+++.|+|||.+.+..++.++||||||+++|+|++|..||.............             ..
T Consensus       182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-------------~~  244 (336)
T 3fhr_A          182 TQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK-------------RR  244 (336)
T ss_dssp             --------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred             cccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH-------------Hh
Confidence            5322    234467889999999988899999999999999999999999996543221110000             00


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ...............++.++.+++.+||..||.+|||+++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          245 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            00000001111123567789999999999999999999999984


No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1e-43  Score=300.18  Aligned_cols=261  Identities=21%  Similarity=0.246  Sum_probs=195.0

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccc--hhHHHHHHHHHHHHccCCCCccccccceeccCCc------e
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEF------K   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------~   71 (285)
                      +|.+.+.||+|+||.||+|.. .+|+.||||++....  ......+.+|+.+++.++||||+++++++.....      .
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  104 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF  104 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred             eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence            477889999999999999975 469999999986532  3345678899999999999999999999977654      4


Q ss_pred             EEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392           72 ALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus        72 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      +++||++. ++|.+++..   .++...++.++.||+.||.|||   ++|++|+||+|+||+++.++.++|+|||++....
T Consensus       105 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          105 YLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             EEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             EEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            89999996 488887643   3899999999999999999999   9999999999999999999999999999997654


Q ss_pred             cccccceeccccccccccCCcccCC-CccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcc-----
Q 039392          152 REDISTIQTQTLATIGYMAPEYGKE-GRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTK-----  225 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----  225 (285)
                      ..     .....+++.|+|||.+.+ ..++.++||||||+++++|++|..||.+....+. ..............     
T Consensus       178 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~  251 (353)
T 3coi_A          178 AE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQKL  251 (353)
T ss_dssp             -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH-HHHHHHHHCBCCHHHHTTC
T ss_pred             CC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHH
Confidence            32     233467899999998876 6789999999999999999999999976432211 11111110000000     


Q ss_pred             ------ccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          226 ------EIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       226 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                            .............-......+++++.+++.+||..||.+|||+++++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          252 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             SCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                  0000000000000001123567889999999999999999999999864


No 237
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.2e-43  Score=301.80  Aligned_cols=264  Identities=16%  Similarity=0.224  Sum_probs=197.2

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCC-----------CCccccccceeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-----------HRNIIKVISSCSNE   68 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~~~   68 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++... ....+.+.+|+.++++++           |+||+++++++...
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~   98 (373)
T 1q8y_A           20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   98 (373)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence            478899999999999999975 57899999998743 334466778999888876           78999999998754


Q ss_pred             C----ceEEEEeccCCCCHHHhhhcC-CCccCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeC------CC
Q 039392           69 E----FKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDVASTLEYLHFGYSA-QVIHCDLKPSNVLLD------DN  136 (285)
Q Consensus        69 ~----~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~-~~~h~di~~~nili~------~~  136 (285)
                      +    ..+++||++ +++|.+++... ...++...++.++.||+.||.|||   ++ |++|+||||+||+++      ..
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~  174 (373)
T 1q8y_A           99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENL  174 (373)
T ss_dssp             ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred             CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCc
Confidence            3    788999999 78999998764 334899999999999999999999   87 999999999999994      44


Q ss_pred             CcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccc-----hh
Q 039392          137 MVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGE-----MT  211 (285)
Q Consensus       137 ~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~-----~~  211 (285)
                      +.++|+|||++......     .....+++.|+|||.+.+..++.++||||||+++|+|++|..||.......     ..
T Consensus       175 ~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  249 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  249 (373)
T ss_dssp             EEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             ceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence            58999999999876542     234468999999999999899999999999999999999999997543211     11


Q ss_pred             hhhhhhhhcCCCcc------------------ccccc-cccC---cccchhhhhhHhHHHHHHhhhcccccCcCCCCCHH
Q 039392          212 LKHWVNDWLPISTK------------------EIVDP-NLLS---REDIHFVAKEQCVSFVFNVAMECTVESPEQRINAK  269 (285)
Q Consensus       212 ~~~~~~~~~~~~~~------------------~~~~~-~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~  269 (285)
                      ...........+..                  ..+.. ....   ........+...+.++.+||.+||+.||.+|||++
T Consensus       250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            11111111110000                  00000 0000   00011122356788999999999999999999999


Q ss_pred             HHHHH
Q 039392          270 EIVTK  274 (285)
Q Consensus       270 eil~~  274 (285)
                      |++++
T Consensus       330 ell~h  334 (373)
T 1q8y_A          330 GLVNH  334 (373)
T ss_dssp             HHHTC
T ss_pred             HHhhC
Confidence            99874


No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.7e-43  Score=297.62  Aligned_cols=263  Identities=21%  Similarity=0.257  Sum_probs=197.2

Q ss_pred             CCCCCceecccCceEEEEEEeC-CC-cEEEEEEeeccchhHHHHHHHHHHHHccCCCCc------cccccceeccCCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DG-MEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRN------IIKVISSCSNEEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~-~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~   72 (285)
                      +|++.+.||+|+||+||+|... ++ +.||+|++... ....+.+.+|+.+++.++|++      ++.+.+++...+..+
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~   98 (355)
T 2eu9_A           20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC   98 (355)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence            4788999999999999999753 34 78999998643 344566778999998887655      888899999999999


Q ss_pred             EEEeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee------------------
Q 039392           73 LVLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLL------------------  133 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili------------------  133 (285)
                      +|||++ ++++.+.+.... ..++...++.++.||+.||.|||   ++|++|+||||+||++                  
T Consensus        99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~  174 (355)
T 2eu9_A           99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK  174 (355)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred             EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccccc
Confidence            999999 556766665443 45899999999999999999999   9999999999999999                  


Q ss_pred             -CCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhh
Q 039392          134 -DDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTL  212 (285)
Q Consensus       134 -~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~  212 (285)
                       +.++.++|+|||++......     .....+++.|+|||.+.+..++.++||||||+++|+|++|..||......+.. 
T Consensus       175 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-  248 (355)
T 2eu9_A          175 SVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL-  248 (355)
T ss_dssp             EESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-
T ss_pred             ccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH-
Confidence             56789999999999865432     23456899999999999999999999999999999999999999764332211 


Q ss_pred             hhhhhhhcCCCcc--------ccccc--ccc--------------CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCH
Q 039392          213 KHWVNDWLPISTK--------EIVDP--NLL--------------SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINA  268 (285)
Q Consensus       213 ~~~~~~~~~~~~~--------~~~~~--~~~--------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~  268 (285)
                      ..........+..        .....  ...              .............+.++.+|+++||..||.+|||+
T Consensus       249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  328 (355)
T 2eu9_A          249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL  328 (355)
T ss_dssp             HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence            1111111111000        00000  000              00000011123446789999999999999999999


Q ss_pred             HHHHHH
Q 039392          269 KEIVTK  274 (285)
Q Consensus       269 ~eil~~  274 (285)
                      ++++++
T Consensus       329 ~e~l~h  334 (355)
T 2eu9_A          329 AEALLH  334 (355)
T ss_dssp             HHHTTS
T ss_pred             HHHhcC
Confidence            999853


No 239
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2.4e-43  Score=298.68  Aligned_cols=267  Identities=21%  Similarity=0.237  Sum_probs=185.0

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCccccccceeccCCc-------eE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEF-------KA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~   72 (285)
                      +|++.+.||+|+||+||+|.. .+++.||+|++.... .......++++.+..++||||+++++++.....       .+
T Consensus        24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~  102 (360)
T 3e3p_A           24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN  102 (360)
T ss_dssp             TEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEE
Confidence            588899999999999999986 468999999886432 223445667888888899999999999854332       78


Q ss_pred             EEEeccCCCCHHHhhh---cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-CCcEEEeeeccce
Q 039392           73 LVLEYMPHGSLEKYLH---SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD-NMVAHLSDFGIAK  148 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~-~~~~~i~df~~~~  148 (285)
                      +|||++++ +|...+.   .....++...++.++.|++.||.||| .++.|++|+||||+||+++. ++.++|+|||++.
T Consensus       103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~  180 (360)
T 3e3p_A          103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK  180 (360)
T ss_dssp             EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred             EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence            99999976 5554433   23345889999999999999999999 34689999999999999996 8999999999998


Q ss_pred             ecCcccccceeccccccccccCCcccCCC-ccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCc---
Q 039392          149 LLTREDISTIQTQTLATIGYMAPEYGKEG-RVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPIST---  224 (285)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~---  224 (285)
                      ......   ......+++.|+|||.+.+. .++.++||||||+++|+|++|..||........ .............   
T Consensus       181 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~  256 (360)
T 3e3p_A          181 KLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-LHEIVRVLGCPSREVL  256 (360)
T ss_dssp             CCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHH
T ss_pred             ecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-HHHHHHHcCCCCHHHH
Confidence            765432   22345678999999988665 489999999999999999999999976433222 1222111111100   


Q ss_pred             ---------cccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          225 ---------KEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       225 ---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                               ......................+.++.+|+.+||+.||.+|||++|++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence                     00000000000000001112357789999999999999999999999864


No 240
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.5e-43  Score=306.01  Aligned_cols=247  Identities=21%  Similarity=0.358  Sum_probs=186.8

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEeccCC
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLEYMPH   80 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~   80 (285)
                      |++.+.||+|+||+|+.....+++.||||++.....   ..+.+|+++++.+ +||||+++++++......++|||++.+
T Consensus        26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g  102 (432)
T 3p23_A           26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA  102 (432)
T ss_dssp             EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC
Confidence            677889999999997766566799999999865432   2355799999999 799999999999999999999999964


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-----CCcEEEeeeccceecCcccc
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD-----NMVAHLSDFGIAKLLTREDI  155 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~-----~~~~~i~df~~~~~~~~~~~  155 (285)
                       +|.+++.......+...++.++.||+.||.|||   ++|++||||||+||+++.     ...++|+|||++........
T Consensus       103 -~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          103 -TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             -EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             -CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence             999999776655555567789999999999999   999999999999999953     23578999999987654321


Q ss_pred             c-ceeccccccccccCCcccCC---CccCcchhhHHHHHHHHHHhh-CCCCCccccccchhhhhhhhhhcCCCccccccc
Q 039392          156 S-TIQTQTLATIGYMAPEYGKE---GRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDP  230 (285)
Q Consensus       156 ~-~~~~~~~~~~~~~~PE~~~~---~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                      . .......+|+.|+|||++.+   ..++.++|||||||++++|++ |..||..........  ...   .....     
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--~~~---~~~~~-----  248 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--LLG---ACSLD-----  248 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--HTT---CCCCT-----
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--Hhc---cCCcc-----
Confidence            1 22234568999999999874   567889999999999999999 888985432221111  000   00000     


Q ss_pred             cccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH
Q 039392          231 NLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT  273 (285)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~  273 (285)
                              ........+..+.+++.+||+.||.+|||++++++
T Consensus       249 --------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          249 --------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             --------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence                    00012244666889999999999999999999995


No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=4e-43  Score=303.99  Aligned_cols=248  Identities=23%  Similarity=0.368  Sum_probs=186.2

Q ss_pred             CCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEeccCCC
Q 039392            3 SENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         3 ~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      ...+.||+|+||+||.+...+|+.||||.+....   .+.+.+|+++++++ +||||+++++++...+..++|||+++ +
T Consensus        18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g   93 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L   93 (434)
T ss_dssp             EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred             eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence            3467899999999987766789999999986543   34567899999876 89999999999999999999999996 5


Q ss_pred             CHHHhhhcCCCc------cCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-------------CcEEEe
Q 039392           82 SLEKYLHSSNYI------LDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDN-------------MVAHLS  142 (285)
Q Consensus        82 ~L~~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~-------------~~~~i~  142 (285)
                      +|.+++......      .+...++.++.||+.||+|||   ++|++||||||+||+++.+             +.++|+
T Consensus        94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~  170 (434)
T 2rio_A           94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS  170 (434)
T ss_dssp             EHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred             CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence            999999765421      122345779999999999999   9999999999999999754             489999


Q ss_pred             eeccceecCcccccc--eeccccccccccCCcccCC-------CccCcchhhHHHHHHHHHHhh-CCCCCccccccchhh
Q 039392          143 DFGIAKLLTREDIST--IQTQTLATIGYMAPEYGKE-------GRVSANGDVYSFGIMLIETFT-RKKPTDEIFNGEMTL  212 (285)
Q Consensus       143 df~~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~-------~~~~~~~Di~slG~~l~~ll~-g~~p~~~~~~~~~~~  212 (285)
                      |||++..........  ......+|+.|+|||++.+       ..++.++||||||+++|+|++ |..||........  
T Consensus       171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--  248 (434)
T 2rio_A          171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--  248 (434)
T ss_dssp             CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--
T ss_pred             ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--
Confidence            999998776532211  1234568999999998865       568999999999999999999 9999865433221  


Q ss_pred             hhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHH
Q 039392          213 KHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVT  273 (285)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~  273 (285)
                       ..........             .........++.++.+++.+||+.||.+|||++++++
T Consensus       249 -~i~~~~~~~~-------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          249 -NIIRGIFSLD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             -HHHHTCCCCC-------------CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -HHhcCCCCcc-------------cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence             1111111100             0011113456788999999999999999999999986


No 242
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=7.8e-43  Score=297.76  Aligned_cols=198  Identities=24%  Similarity=0.337  Sum_probs=167.3

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CC-----ccccccceeccCCceEE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HR-----NIIKVISSCSNEEFKAL   73 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~i~~~~~~~~~~~~~~~   73 (285)
                      +|++.+.||+|+||+||+|... +++.||||++... ......+.+|+.+++.++ |+     +++++.+.+...+..++
T Consensus        55 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  133 (382)
T 2vx3_A           55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL  133 (382)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred             eEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence            4778899999999999999754 6889999998744 334456677888888774 44     48999999999999999


Q ss_pred             EEeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--CCCcEEEeeeccceec
Q 039392           74 VLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD--DNMVAHLSDFGIAKLL  150 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~--~~~~~~i~df~~~~~~  150 (285)
                      |||++.+ +|.+++.... ..++...++.++.|++.||.|||. ++.|++||||||+||+++  .++.+||+|||++...
T Consensus       134 v~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          134 VFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             EEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence            9999965 9999987654 448999999999999999999992 246899999999999995  5788999999999876


Q ss_pred             CcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCcccc
Q 039392          151 TREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIF  206 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~  206 (285)
                      ...     .....+++.|+|||++.+..++.++||||||+++|+|++|..||.+..
T Consensus       212 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          212 GQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             TCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            542     234568899999999999999999999999999999999999998643


No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=4e-44  Score=298.71  Aligned_cols=239  Identities=22%  Similarity=0.305  Sum_probs=196.4

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccchh------HHHHHHHHHHHHccCC--CCccccccceeccCCce
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGR------VFKSFDVECEMMKSIH--HRNIIKVISSCSNEEFK   71 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~   71 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++......      ..+.+.+|+.+++.++  |+||+++++++...+..
T Consensus        44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~  123 (320)
T 3a99_A           44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF  123 (320)
T ss_dssp             TEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcE
Confidence            478899999999999999974 57899999998754321      2244667999999986  59999999999999999


Q ss_pred             EEEEeccCC-CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCcEEEeeecccee
Q 039392           72 ALVLEYMPH-GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIAKL  149 (285)
Q Consensus        72 ~~v~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~-~~~~~~i~df~~~~~  149 (285)
                      ++++|++.+ ++|.+++.... .++...++.++.|++.||.|||   +.|++|+||+|+||+++ .++.++|+|||++..
T Consensus       124 ~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~  199 (320)
T 3a99_A          124 VLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGAL  199 (320)
T ss_dssp             EEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence            999999975 79999987654 4899999999999999999999   99999999999999999 789999999999987


Q ss_pred             cCcccccceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccc
Q 039392          150 LTREDISTIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIV  228 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                      .....    .....+++.|+|||.+.+..+ +.++||||||+++|+|++|..||.....       ......        
T Consensus       200 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~--------  260 (320)
T 3a99_A          200 LKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQV--------  260 (320)
T ss_dssp             CCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCC--------
T ss_pred             ccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------hhcccc--------
Confidence            65432    233568899999998876655 7889999999999999999999865211       000000        


Q ss_pred             cccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          229 DPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                  .....++.++.+++.+||..||.+|||+++++++
T Consensus       261 ------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          261 ------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             ------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ------------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                        0012356679999999999999999999999874


No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4.2e-43  Score=313.15  Aligned_cols=273  Identities=23%  Similarity=0.286  Sum_probs=201.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeecc-chhHHHHHHHHHHHHccCCCCccccccceecc------CCceE
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQ-YGRVFKSFDVECEMMKSIHHRNIIKVISSCSN------EEFKA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~   72 (285)
                      +|++.+.||+|+||+||+|.. .+|+.||+|++... .....+.+.+|+++++.++||||+++++++..      .+..+
T Consensus        15 rY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~   94 (676)
T 3qa8_A           15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL   94 (676)
T ss_dssp             --CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCC
T ss_pred             CeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEE
Confidence            589999999999999999975 56899999998654 34455778899999999999999999998755      67789


Q ss_pred             EEEeccCCCCHHHhhhcCCC--ccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCc---EEEeeeccc
Q 039392           73 LVLEYMPHGSLEKYLHSSNY--ILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMV---AHLSDFGIA  147 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~---~~i~df~~~  147 (285)
                      +|||++++++|.+++.....  .+++..++.++.|++.||.|||   +.|++|+||+|+||+++.++.   ++|+|||++
T Consensus        95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a  171 (676)
T 3qa8_A           95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA  171 (676)
T ss_dssp             CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred             EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence            99999999999999976432  4888899999999999999999   999999999999999987665   899999999


Q ss_pred             eecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhh-hcCCCc-c
Q 039392          148 KLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVND-WLPIST-K  225 (285)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~-~~~~~~-~  225 (285)
                      .......   ......+++.|+|||.+.+..++.++||||||+++|+|++|..||................ ...... .
T Consensus       172 ~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~  248 (676)
T 3qa8_A          172 KELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD  248 (676)
T ss_dssp             CBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred             ccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence            8765432   2234578999999999999999999999999999999999999997542221100000000 000000 0


Q ss_pred             cccccccc-CcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHH-----HHHHHHHH
Q 039392          226 EIVDPNLL-SREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEI-----VTKLVKIR  279 (285)
Q Consensus       226 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ei-----l~~l~~l~  279 (285)
                      ........ ...+.........+..+.+++.+||..||.+|||++++     .+.++++.
T Consensus       249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence            00000000 00011111234578889999999999999999999984     45555544


No 245
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=7.4e-44  Score=296.09  Aligned_cols=239  Identities=25%  Similarity=0.344  Sum_probs=190.9

Q ss_pred             CCCCCceecccCceEEEEEEe-CCCcEEEEEEeeccch------hHHHHHHHHHHHHccC----CCCccccccceeccCC
Q 039392            1 GFSENNLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYG------RVFKSFDVECEMMKSI----HHRNIIKVISSCSNEE   69 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~------~~~~~~~~e~~~l~~l----~h~~i~~~~~~~~~~~   69 (285)
                      +|++.+.||+|+||.||+|.. .+++.||+|++.....      .....+.+|+.+++++    +|+||+++++++...+
T Consensus        32 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~  111 (312)
T 2iwi_A           32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE  111 (312)
T ss_dssp             -CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred             ceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC
Confidence            488999999999999999975 5789999999865432      1223455788888888    8999999999999999


Q ss_pred             ceEEEEec-cCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCcEEEeeeccc
Q 039392           70 FKALVLEY-MPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLD-DNMVAHLSDFGIA  147 (285)
Q Consensus        70 ~~~~v~e~-~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~-~~~~~~i~df~~~  147 (285)
                      ..++++|+ +.+++|.+++.... .++...++.++.|++.||.|||   +.|++|+||+|+||+++ .++.++|+|||++
T Consensus       112 ~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          112 GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSG  187 (312)
T ss_dssp             -CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred             eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence            99999999 78899999997654 3899999999999999999999   99999999999999999 8999999999999


Q ss_pred             eecCcccccceeccccccccccCCcccCCCcc-CcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccc
Q 039392          148 KLLTREDISTIQTQTLATIGYMAPEYGKEGRV-SANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKE  226 (285)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                      .......    .....++..|+|||.+.+..+ +.++||||||+++|+|++|..||.....       .....       
T Consensus       188 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~-------  249 (312)
T 2iwi_A          188 ALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------ILEAE-------  249 (312)
T ss_dssp             EECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHTC-------
T ss_pred             hhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------Hhhhc-------
Confidence            8765432    234558889999998876655 5689999999999999999999864211       00000       


Q ss_pred             cccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          227 IVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                                   ...+..++.++.+++.+||..||.+|||+++++++
T Consensus       250 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          250 -------------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             -------------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                         00123456678999999999999999999999873


No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=8.1e-42  Score=280.13  Aligned_cols=231  Identities=14%  Similarity=0.059  Sum_probs=184.3

Q ss_pred             CCCCCceecccCceEEEEEEeC-CCcEEEEEEeeccc---hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            1 GFSENNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQY---GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      .|++.+.||+|+||.||+|... +++.||+|++....   ....+.+.+|+..+..++||||+++++++...+..|+|||
T Consensus        32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  111 (286)
T 3uqc_A           32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE  111 (286)
T ss_dssp             TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence            3888999999999999999864 58999999997543   3445778899999999999999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |++|++|.+++...   .....+..++.|++.||.|||   ++|++|+||||+||+++.+|.++|++++           
T Consensus       112 ~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~-----------  174 (286)
T 3uqc_A          112 WIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA-----------  174 (286)
T ss_dssp             CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred             ecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence            99999999998543   345568889999999999999   9999999999999999999999997432           


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcc
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSRE  236 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
                                 |++       .++.++||||||+++|+|++|..||...........              .........
T Consensus       175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--------------~~~~~~~~~  222 (286)
T 3uqc_A          175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--------------AERDTAGQP  222 (286)
T ss_dssp             -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--------------CCBCTTSCB
T ss_pred             -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--------------HHHHhccCC
Confidence                       222       268899999999999999999999976432211000              000000000


Q ss_pred             cchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHHHHHHHHH
Q 039392          237 DIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTKLVKIRDS  281 (285)
Q Consensus       237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l~~l~~~  281 (285)
                      .........+++++.+++.+||+.||.+| |++++++.|+++...
T Consensus       223 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          223 IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            11111234567889999999999999999 999999999988643


No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=3e-41  Score=278.78  Aligned_cols=229  Identities=19%  Similarity=0.278  Sum_probs=178.6

Q ss_pred             CCCCC-ceecccCceEEEEEEe-CCCcEEEEEEeeccchhHHHHHHHHHHHH-ccCCCCccccccceecc----CCceEE
Q 039392            1 GFSEN-NLIGRGGFGSVFKARL-GDGMEVAVKVFNLQYGRVFKSFDVECEMM-KSIHHRNIIKVISSCSN----EEFKAL   73 (285)
Q Consensus         1 ~y~~~-~~lg~G~~~~v~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~----~~~~~~   73 (285)
                      +|.+. +.||+|+||.||++.. .+++.||+|++...     ..+.+|++++ +..+||||+++++++..    ....++
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   92 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   92 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence            35555 7799999999999975 57899999998643     3455688777 66689999999999876    677899


Q ss_pred             EEeccCCCCHHHhhhcCC-CccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCcEEEeeecccee
Q 039392           74 VLEYMPHGSLEKYLHSSN-YILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDD---NMVAHLSDFGIAKL  149 (285)
Q Consensus        74 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~---~~~~~i~df~~~~~  149 (285)
                      |||++++++|.+++.... ..+++..++.++.|++.||.|||   +.|++|+||||+||+++.   ++.++|+|||++..
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A           93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence            999999999999987653 35899999999999999999999   999999999999999997   78999999999864


Q ss_pred             cCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCcccccc
Q 039392          150 LTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVD  229 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                      ..                        +..++.++||||||+++|+|++|..||...........             ...
T Consensus       170 ~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-------------~~~  212 (299)
T 3m2w_A          170 TT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-------------MKT  212 (299)
T ss_dssp             CT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-------------SCC
T ss_pred             cc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-------------HHH
Confidence            32                        23467899999999999999999999965322111000             000


Q ss_pred             ccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          230 PNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      ................+++++.+++.+||..||.+|||+++++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          213 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             SSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            000111111111224568889999999999999999999999975


No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.5e-41  Score=309.51  Aligned_cols=241  Identities=20%  Similarity=0.293  Sum_probs=194.8

Q ss_pred             CCCCCceecccCceEEEEEEeC--CCcEEEEEEeeccc-hhHHHHHHHHHHHHccCCCCccccccceeccCCc-----eE
Q 039392            1 GFSENNLIGRGGFGSVFKARLG--DGMEVAVKVFNLQY-GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEF-----KA   72 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~--~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-----~~   72 (285)
                      +|++.+.||+|+||+||++.+.  +++.||||++.... ......+.+|++++++++||||+++++++...+.     .|
T Consensus        81 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~  160 (681)
T 2pzi_A           81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGY  160 (681)
T ss_dssp             TEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeE
Confidence            4788899999999999999864  68999999986433 3455678899999999999999999999977655     79


Q ss_pred             EEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCc
Q 039392           73 LVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTR  152 (285)
Q Consensus        73 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~  152 (285)
                      +||||+++++|.+++..   .++...++.++.||+.||.|||   ++|++|+||||+||+++.+ .+||+|||++.....
T Consensus       161 lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~  233 (681)
T 2pzi_A          161 IVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS  233 (681)
T ss_dssp             EEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred             EEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence            99999999999887754   4899999999999999999999   9999999999999999875 899999999987654


Q ss_pred             ccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccc
Q 039392          153 EDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNL  232 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .      ....+|+.|+|||.+.+. ++.++||||||+++++|++|..||........                      
T Consensus       234 ~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------------------  284 (681)
T 2pzi_A          234 F------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------------------  284 (681)
T ss_dssp             C------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------------
T ss_pred             C------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----------------------
Confidence            2      345689999999988654 48899999999999999999888654211100                      


Q ss_pred             cCcccchhhhhhHhHHHHHHhhhcccccCcCCCC-CHHHHHHHHHHHHHHH
Q 039392          233 LSREDIHFVAKEQCVSFVFNVAMECTVESPEQRI-NAKEIVTKLVKIRDSL  282 (285)
Q Consensus       233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-s~~eil~~l~~l~~~~  282 (285)
                       .    ........++.+.+++.+||..||.+|| +++++...|..+..+.
T Consensus       285 -~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          285 -P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             -C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             -c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence             0    0001223457799999999999999999 6777888887776543


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=6.1e-42  Score=294.75  Aligned_cols=244  Identities=15%  Similarity=0.150  Sum_probs=182.6

Q ss_pred             CCCCceecccCceEEEEEE-eCCCcEEEEEEeeccch---hHHHHHHHHHHHHccCCC-Cccccccce------------
Q 039392            2 FSENNLIGRGGFGSVFKAR-LGDGMEVAVKVFNLQYG---RVFKSFDVECEMMKSIHH-RNIIKVISS------------   64 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~-~~~~~~~~iK~~~~~~~---~~~~~~~~e~~~l~~l~h-~~i~~~~~~------------   64 (285)
                      |...+.||+|+||+||+|. ..+|+.||||++.....   ...+.+.+|+.+++.++| ++...+...            
T Consensus        80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  159 (413)
T 3dzo_A           80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  159 (413)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred             EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence            4567899999999999998 45799999999874332   235678899999999976 322211111            


Q ss_pred             ---------ecc-----CCceEEEEeccCCCCHHHhhh------cCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 039392           65 ---------CSN-----EEFKALVLEYMPHGSLEKYLH------SSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC  124 (285)
Q Consensus        65 ---------~~~-----~~~~~~v~e~~~~~~L~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~  124 (285)
                               +..     ....+++|+.+ +++|.+++.      .....++...++.++.|++.||.|||   ++|++||
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiHr  235 (413)
T 3dzo_A          160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHT  235 (413)
T ss_dssp             CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred             CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence                     111     22456777776 569998884      22445778889999999999999999   9999999


Q ss_pred             CCCCCCeeeCCCCcEEEeeeccceecCcccccceeccccccccccCCccc----------CCCccCcchhhHHHHHHHHH
Q 039392          125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG----------KEGRVSANGDVYSFGIMLIE  194 (285)
Q Consensus       125 di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~----------~~~~~~~~~Di~slG~~l~~  194 (285)
                      ||||+||+++.++.+||+|||++......     .....+ +.|+|||.+          .+..++.++||||||+++|+
T Consensus       236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e  309 (413)
T 3dzo_A          236 YLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW  309 (413)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred             CcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence            99999999999999999999999876543     233456 899999988          55678999999999999999


Q ss_pred             HhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHhhhcccccCcCCCCCHHHHHHH
Q 039392          195 TFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNVAMECTVESPEQRINAKEIVTK  274 (285)
Q Consensus       195 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~eil~~  274 (285)
                      |++|..||..........                 ..        +.....++.++.+++.+||..||.+|||+.+++++
T Consensus       310 lltg~~Pf~~~~~~~~~~-----------------~~--------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          310 IWCADLPNTDDAALGGSE-----------------WI--------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             HHHSSCCCCTTGGGSCSG-----------------GG--------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHCCCCCCCcchhhhHH-----------------HH--------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            999999997533211100                 00        00012345779999999999999999999988765


Q ss_pred             --HHHHHH
Q 039392          275 --LVKIRD  280 (285)
Q Consensus       275 --l~~l~~  280 (285)
                        ++.+++
T Consensus       365 ~~~~~~~~  372 (413)
T 3dzo_A          365 PEYEQLRT  372 (413)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence              444443


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=8.3e-41  Score=280.54  Aligned_cols=240  Identities=16%  Similarity=0.184  Sum_probs=182.2

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccc--------hhHHHHHHHHHHHHccCC-------------------
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--------GRVFKSFDVECEMMKSIH-------------------   54 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~l~-------------------   54 (285)
                      |++.+.||+|+||+||+|+. +|+.||||++....        ....+.+.+|+.+++.++                   
T Consensus        22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~  100 (336)
T 2vuw_A           22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV  100 (336)
T ss_dssp             HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEE
T ss_pred             chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcce
Confidence            77899999999999999987 68999999997542        223466778888888776                   


Q ss_pred             -------CCccccccceecc-------------CCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHh
Q 039392           55 -------HRNIIKVISSCSN-------------EEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLH  114 (285)
Q Consensus        55 -------h~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  114 (285)
                             ||||+++++++..             ....++||||+++|++.+.+.+  ..+++..++.++.||+.||.|||
T Consensus       101 ~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH  178 (336)
T 2vuw_A          101 HCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAE  178 (336)
T ss_dssp             EEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH
Confidence                   6667777776664             7889999999998876665543  34899999999999999999999


Q ss_pred             cCCCCCeeecCCCCCCeeeCCCC--------------------cEEEeeeccceecCcccccceeccccccccccCCccc
Q 039392          115 FGYSAQVIHCDLKPSNVLLDDNM--------------------VAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYG  174 (285)
Q Consensus       115 ~~~~~~~~h~di~~~nili~~~~--------------------~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~  174 (285)
                      .  ++|++||||||+||+++.++                    .+||+|||+++.....       ...+|+.|+|||++
T Consensus       179 ~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE~~  249 (336)
T 2vuw_A          179 A--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDEDLF  249 (336)
T ss_dssp             H--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCSGGG
T ss_pred             H--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccChhhh
Confidence            3  48999999999999999877                    8999999999866432       34688999999999


Q ss_pred             CCCccCcchhhHHHHHH-HHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchhhhhhHhHHHHHHh
Q 039392          175 KEGRVSANGDVYSFGIM-LIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHFVAKEQCVSFVFNV  253 (285)
Q Consensus       175 ~~~~~~~~~Di~slG~~-l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  253 (285)
                      .+.. +.++||||+|.+ .+++++|..||................   ..         . ...........+++++.+|
T Consensus       250 ~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~---------~-~~~~~~~~~~~~s~~~~dl  315 (336)
T 2vuw_A          250 TGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQ---MT---------F-KTKCNTPAMKQIKRKIQEF  315 (336)
T ss_dssp             CCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHT---CC---------C-SSCCCSHHHHHHHHHHHHH
T ss_pred             cCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhh---hc---------c-CcccchhhhhhcCHHHHHH
Confidence            8776 899999998776 778888999875421000000000000   00         0 0001112345688999999


Q ss_pred             hhcccccCcCCCCCHHHHH
Q 039392          254 AMECTVESPEQRINAKEIV  272 (285)
Q Consensus       254 i~~~l~~~p~~Rps~~eil  272 (285)
                      |++||+.|     |++|+|
T Consensus       316 i~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          316 HRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHGGGSS-----SHHHHH
T ss_pred             HHHHhccC-----CHHHHH
Confidence            99999977     999998


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=1.8e-33  Score=250.18  Aligned_cols=183  Identities=20%  Similarity=0.140  Sum_probs=129.6

Q ss_pred             cccCceEEEEEE-eCCCcEEEEEEeeccc----------hhHHHHHHHHHHHHccC-CCCccccccceeccCCceEEEEe
Q 039392            9 GRGGFGSVFKAR-LGDGMEVAVKVFNLQY----------GRVFKSFDVECEMMKSI-HHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         9 g~G~~~~v~~~~-~~~~~~~~iK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      +.|+.|....++ .-.|+.+++|++....          ....+.+.+|+++|+++ +|+||++++++++++..+|+|||
T Consensus       243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVME  322 (569)
T 4azs_A          243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVME  322 (569)
T ss_dssp             C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEE
T ss_pred             ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEe
Confidence            445555555443 3358889999986431          23446789999999999 69999999999999999999999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |++|++|.+++.+.+. ++..   .++.||+.||+|+|   ++||+||||||+|||++.+|.+||+|||+++......  
T Consensus       323 yv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--  393 (569)
T 4azs_A          323 KLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--  393 (569)
T ss_dssp             CCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----
T ss_pred             cCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC--
Confidence            9999999999977654 6654   47899999999999   9999999999999999999999999999998765432  


Q ss_pred             ceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCC
Q 039392          157 TIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKP  201 (285)
Q Consensus       157 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p  201 (285)
                      .......+|+.|+|||++.+ .+..++|+|++|++++.+.++..+
T Consensus       394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            22234679999999999876 467789999999998877666544


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.95  E-value=1.2e-28  Score=218.11  Aligned_cols=183  Identities=17%  Similarity=0.205  Sum_probs=143.6

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccc--------hhHHHHHHHHHHHHccCCCCccccccceeccCCceEEEEe
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQY--------GRVFKSFDVECEMMKSIHHRNIIKVISSCSNEEFKALVLE   76 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   76 (285)
                      .+.||+|+||.||++.. .++.+++|......        ....+.+.+|++++++++||||+++..++...+..++|||
T Consensus       341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            46899999999999954 57888888764322        1123557899999999999999966666666677799999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCccccc
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDIS  156 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~  156 (285)
                      |+++++|.+++..         +..++.|++.+|.|||   ++|++||||||+||+++.  .+||+|||+++........
T Consensus       420 ~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~  485 (540)
T 3en9_A          420 YINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK  485 (540)
T ss_dssp             CCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred             CCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence            9999999999865         4578999999999999   999999999999999998  9999999999987653221


Q ss_pred             c-----eeccccccccccCCcccCC--CccCcchhhHHHHHHHHHHhhCCCCC
Q 039392          157 T-----IQTQTLATIGYMAPEYGKE--GRVSANGDVYSFGIMLIETFTRKKPT  202 (285)
Q Consensus       157 ~-----~~~~~~~~~~~~~PE~~~~--~~~~~~~Di~slG~~l~~ll~g~~p~  202 (285)
                      .     ......+|+.|+|||++..  ..|+...|+|+..+-..+-+.++-+|
T Consensus       486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            1     1234568999999999887  56888899999998888877776655


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.92  E-value=1.3e-25  Score=183.05  Aligned_cols=133  Identities=17%  Similarity=0.179  Sum_probs=109.0

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccch------------------hHHHHHHHHHHHHccCCCCccccccc
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYG------------------RVFKSFDVECEMMKSIHHRNIIKVIS   63 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~~i~~~~~   63 (285)
                      |.+++.||+|+||.||+|...+|+.||+|++.....                  .....+.+|+++++.++  | +++.+
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~  168 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK  168 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred             EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence            345599999999999999887799999999864321                  13456889999999998  5 66666


Q ss_pred             eeccCCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEee
Q 039392           64 SCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSD  143 (285)
Q Consensus        64 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~d  143 (285)
                      ++.. +..++|||+++|++|.+ +..       .....++.|++.|+.+||   +.|++|+||||+||+++ ++.++|+|
T Consensus       169 ~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~D  235 (282)
T 1zar_A          169 VYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIID  235 (282)
T ss_dssp             EEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred             EEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence            5544 55689999999999988 422       123468999999999999   99999999999999999 99999999


Q ss_pred             eccceec
Q 039392          144 FGIAKLL  150 (285)
Q Consensus       144 f~~~~~~  150 (285)
                      ||++...
T Consensus       236 FG~a~~~  242 (282)
T 1zar_A          236 FPQSVEV  242 (282)
T ss_dssp             CTTCEET
T ss_pred             CCCCeEC
Confidence            9999743


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.85  E-value=7.7e-22  Score=158.88  Aligned_cols=138  Identities=22%  Similarity=0.280  Sum_probs=104.6

Q ss_pred             CCCCceecccCceEEEEEEe-CCCcE--EEEEEeeccchh------------------------HHHHHHHHHHHHccCC
Q 039392            2 FSENNLIGRGGFGSVFKARL-GDGME--VAVKVFNLQYGR------------------------VFKSFDVECEMMKSIH   54 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~-~~~~~--~~iK~~~~~~~~------------------------~~~~~~~e~~~l~~l~   54 (285)
                      |++.+.||+|+||.||+|.. .+|+.  ||||++......                        ....+.+|+.+++.+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999986 67888  999987543111                        1235778999999998


Q ss_pred             CCcc--ccccceeccCCceEEEEeccCC-C----CHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 039392           55 HRNI--IKVISSCSNEEFKALVLEYMPH-G----SLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLK  127 (285)
Q Consensus        55 h~~i--~~~~~~~~~~~~~~~v~e~~~~-~----~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~  127 (285)
                      |+++  +.++..    ...++||||+.+ |    +|.+....    .+...+..++.|++.++.+||.  +.|++|+|||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk  198 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS  198 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence            7764  333332    356799999942 3    66665432    2234567899999999999994  5799999999


Q ss_pred             CCCeeeCCCCcEEEeeeccceecC
Q 039392          128 PSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus       128 ~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      |+||+++.  .++|+|||++....
T Consensus       199 p~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          199 EYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             TTSEEESS--SEEECCCTTCEETT
T ss_pred             HHHEEEcC--cEEEEECcccccCC
Confidence            99999988  99999999997543


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.79  E-value=1.1e-19  Score=152.31  Aligned_cols=138  Identities=14%  Similarity=0.153  Sum_probs=97.5

Q ss_pred             CCCCceecccCceEEEEEEeCCCcEEEEEEeeccch------------------hH----HHHHHHHHHHHccCCCCccc
Q 039392            2 FSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYG------------------RV----FKSFDVECEMMKSIHHRNII   59 (285)
Q Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~------------------~~----~~~~~~e~~~l~~l~h~~i~   59 (285)
                      |++++.||+|++|.||+|...+|+.||||++.....                  ..    .-...+|...|.++.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            778899999999999999988899999998753210                  00    01122455555555433321


Q ss_pred             cccceeccCCceEEEEeccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC--
Q 039392           60 KVISSCSNEEFKALVLEYMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNM--  137 (285)
Q Consensus        60 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~--  137 (285)
                       +...+.. ...++|||+++|.+|..+...       .....++.|++.++.+||   ++|++||||||.|||++.+|  
T Consensus       177 -vp~p~~~-~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~  244 (397)
T 4gyi_A          177 -VPEPIAQ-SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDA  244 (397)
T ss_dssp             -CCCEEEE-ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECS
T ss_pred             -CCeeeec-cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCc
Confidence             1111111 123699999999888665421       123467899999999999   99999999999999998776  


Q ss_pred             --------cEEEeeeccceecC
Q 039392          138 --------VAHLSDFGIAKLLT  151 (285)
Q Consensus       138 --------~~~i~df~~~~~~~  151 (285)
                              .+.|+||+-+....
T Consensus       245 ~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          245 EDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             SCTTSEEEEEEECCCTTCEETT
T ss_pred             ccccccccceEEEEeCCcccCC
Confidence                    38999999876544


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.54  E-value=1.5e-14  Score=116.51  Aligned_cols=141  Identities=16%  Similarity=0.106  Sum_probs=108.6

Q ss_pred             CCCCCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCccccccceeccCCceEEEEeccC
Q 039392            1 GFSENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      ||++...++.|+.+.||++... +..+++|+...........+.+|+.+++.+. +..++++++++...+..|+|||+++
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~   93 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD   93 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred             cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence            5677788888889999999754 6889999986532222345778999998885 6677889998888889999999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG-------------------------------------------  116 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-------------------------------------------  116 (285)
                      |.+|.+.+..      ......++.+++.++..||..                                           
T Consensus        94 G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (263)
T 3tm0_A           94 GVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP  167 (263)
T ss_dssp             SEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred             CeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence            9999876421      112235778899999999941                                           


Q ss_pred             -------------CCCCeeecCCCCCCeeeCCCCcEEEeeeccce
Q 039392          117 -------------YSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       117 -------------~~~~~~h~di~~~nili~~~~~~~i~df~~~~  148 (285)
                                   ....++|+|++|.||+++.++.+.|+||+.+.
T Consensus       168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                         01458999999999999876667799998875


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.42  E-value=5.8e-13  Score=106.96  Aligned_cols=128  Identities=16%  Similarity=0.090  Sum_probs=94.5

Q ss_pred             cccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCc--cccccceeccCCceEEEEeccCCCCHHHh
Q 039392            9 GRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRN--IIKVISSCSNEEFKALVLEYMPHGSLEKY   86 (285)
Q Consensus         9 g~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   86 (285)
                      +.|..+.||++...+|+.+++|+....   ....+.+|+.+++.+.+.+  +.+++++....+..++|||+++|.++.  
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence            356669999998777888999997643   2245667888888885434  456888888778899999999998884  


Q ss_pred             hhcCCCccCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------------
Q 039392           87 LHSSNYILDIYQRLNIMIDVASTLEYLHFGY-------------------------------------------------  117 (285)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-------------------------------------------------  117 (285)
                      ...    .+.   ..++.+++..+..||...                                                 
T Consensus       104 ~~~----~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  176 (264)
T 1nd4_A          104 SSH----LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKA  176 (264)
T ss_dssp             TSC----CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHH
T ss_pred             cCc----CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHH
Confidence            221    111   245677778888888321                                                 


Q ss_pred             ------CCCeeecCCCCCCeeeCCCCcEEEeeeccce
Q 039392          118 ------SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       118 ------~~~~~h~di~~~nili~~~~~~~i~df~~~~  148 (285)
                            ..+++|+|++|.||+++.++.+.|+||+.+.
T Consensus       177 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          177 RMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             TCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                  1129999999999999877667799999875


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.25  E-value=3.1e-11  Score=101.60  Aligned_cols=142  Identities=13%  Similarity=0.150  Sum_probs=103.2

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEee--ccch-hHHHHHHHHHHHHccCC--CCccccccceeccC---CceEEEEe
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFN--LQYG-RVFKSFDVECEMMKSIH--HRNIIKVISSCSNE---EFKALVLE   76 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~--~~~~-~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~---~~~~~v~e   76 (285)
                      .+.|+.|.++.||+.... +..+++|+..  .... .....+.+|+.+++.+.  +..+++++..+...   +..++|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            567899999999999865 4678899875  3221 12346778999998886  44577788887665   45889999


Q ss_pred             ccCCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 039392           77 YMPHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY---------------------------------------  117 (285)
Q Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---------------------------------------  117 (285)
                      +++|.++.+..   ...++......++.+++.+|..||...                                       
T Consensus       122 ~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (359)
T 3dxp_A          122 FVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD  198 (359)
T ss_dssp             CCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred             ecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence            99997774321   112667777888999999999999520                                       


Q ss_pred             ----------------CCCeeecCCCCCCeeeCCCCc--EEEeeeccceec
Q 039392          118 ----------------SAQVIHCDLKPSNVLLDDNMV--AHLSDFGIAKLL  150 (285)
Q Consensus       118 ----------------~~~~~h~di~~~nili~~~~~--~~i~df~~~~~~  150 (285)
                                      ...++|+|+++.||+++.++.  +.++||+.+..-
T Consensus       199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                            257999999999999987653  689999988753


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.10  E-value=4.4e-11  Score=98.32  Aligned_cols=187  Identities=18%  Similarity=0.147  Sum_probs=118.0

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCc--cccccceeccCC---ceEEEEecc
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRN--IIKVISSCSNEE---FKALVLEYM   78 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~--i~~~~~~~~~~~---~~~~v~e~~   78 (285)
                      .+.++.|..+.||+..    ..+++|+....  .....+.+|+++++.+. +..  +.+++.......   ..|+||+++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4568899999999873    56999986433  34466788999998773 322  334444433332   457899999


Q ss_pred             CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 039392           79 PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG------------------------------------------  116 (285)
Q Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~------------------------------------------  116 (285)
                      +|.++.+...   ..++......++.+++..+..||..                                          
T Consensus        99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  175 (304)
T 3sg8_A           99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD  175 (304)
T ss_dssp             CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred             CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence            9988864322   1255666667777777777777741                                          


Q ss_pred             -------------CCCCeeecCCCCCCeeeCC--CCcEEEeeeccceecCcccccceeccccccccccCCcccCC-----
Q 039392          117 -------------YSAQVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKE-----  176 (285)
Q Consensus       117 -------------~~~~~~h~di~~~nili~~--~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----  176 (285)
                                   ....++|+|++|.||+++.  ++.+.++||+.+..-........   ......-.+|+....     
T Consensus       176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~---~~~~~~~~~~~~~~~~l~~Y  252 (304)
T 3sg8_A          176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFIS---LMEDDEEYGMEFVSKILNHY  252 (304)
T ss_dssp             HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHT---TCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHH---HHhhccccCHHHHHHHHHHc
Confidence                         0135799999999999987  56788999998875432110000   000000011221100     


Q ss_pred             C---------ccCcchhhHHHHHHHHHHhhCCCCCc
Q 039392          177 G---------RVSANGDVYSFGIMLIETFTRKKPTD  203 (285)
Q Consensus       177 ~---------~~~~~~Di~slG~~l~~ll~g~~p~~  203 (285)
                      +         ....-.+.|++|.+++.+.+|..+|.
T Consensus       253 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          253 KHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            0         01222589999999999999987753


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.93  E-value=5.9e-09  Score=86.18  Aligned_cols=134  Identities=19%  Similarity=0.189  Sum_probs=93.7

Q ss_pred             CCceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCC----CccccccceeccCCceEEEEeccC
Q 039392            4 ENNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHH----RNIIKVISSCSNEEFKALVLEYMP   79 (285)
Q Consensus         4 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h----~~i~~~~~~~~~~~~~~~v~e~~~   79 (285)
                      ..+.++.|..+.||+.    +..+++|+....  .....+.+|..+++.+.+    -.++++++.    +..++|||+++
T Consensus        41 ~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~  110 (320)
T 3r70_A           41 ELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIK  110 (320)
T ss_dssp             CEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCC
T ss_pred             EEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecC
Confidence            4567899999999998    667999986432  223457789988887765    123444444    45689999999


Q ss_pred             CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 039392           80 HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY------------------------------------------  117 (285)
Q Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~------------------------------------------  117 (285)
                      |.++.....   ..++......++.+++..+..||...                                          
T Consensus       111 G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (320)
T 3r70_A          111 GERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLE  187 (320)
T ss_dssp             CBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred             Ccccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchH
Confidence            988863221   11445555566667777777666321                                          


Q ss_pred             ------------------CCCeeecCCCCCCeeeCCCCcEEEeeeccceec
Q 039392          118 ------------------SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL  150 (285)
Q Consensus       118 ------------------~~~~~h~di~~~nili~~~~~~~i~df~~~~~~  150 (285)
                                        ...++|+|++|.||+++.++.+.++||+.+..-
T Consensus       188 ~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          188 HIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                              123599999999999998777799999998654


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.81  E-value=4.5e-08  Score=78.78  Aligned_cols=133  Identities=17%  Similarity=0.100  Sum_probs=93.7

Q ss_pred             ecccCce-EEEEEEeC-CCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCccccccceeccCCceEEEEeccCCCCHH
Q 039392            8 IGRGGFG-SVFKARLG-DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKVISSCSNEEFKALVLEYMPHGSLE   84 (285)
Q Consensus         8 lg~G~~~-~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   84 (285)
                      +..|..+ .||+.... ++..+++|+.+..   ....+.+|...|+.+. +-.+.+++.++...+..++||++++|.++.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            3445444 68988643 5678999986543   2345677888888775 334677888888888999999999998887


Q ss_pred             HhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------------
Q 039392           85 KYLHSSNYILDIYQRLNIMIDVASTLEYLHFGY-----------------------------------------------  117 (285)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-----------------------------------------------  117 (285)
                      +......     .....+..++...|..||...                                               
T Consensus       109 ~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  183 (272)
T 4gkh_A          109 QVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM  183 (272)
T ss_dssp             HHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred             ccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence            6653321     112235556666677776421                                               


Q ss_pred             --------CCCeeecCCCCCCeeeCCCCcEEEeeeccce
Q 039392          118 --------SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       118 --------~~~~~h~di~~~nili~~~~~~~i~df~~~~  148 (285)
                              ...++|+|+.+.||+++.++.+-|+||+.+.
T Consensus       184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                    1137999999999999988777899998875


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.77  E-value=7.3e-08  Score=79.06  Aligned_cols=136  Identities=15%  Similarity=0.130  Sum_probs=89.1

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCC---ccccccceec-cCCceEEEEeccCC
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHR---NIIKVISSCS-NEEFKALVLEYMPH   80 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~-~~~~~~~v~e~~~~   80 (285)
                      .+.++.|....||+.    +..+++|+..  .......+.+|+++++.+.+.   .+.+++.+.. ..+..+++|++++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            456788888899988    5678999843  233446788899999988642   2455555553 45667899999999


Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFG--------------------------------------------  116 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--------------------------------------------  116 (285)
                      .++.+..-.   .++......++.++...|..||..                                            
T Consensus        98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~  174 (306)
T 3tdw_A           98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL  174 (306)
T ss_dssp             EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred             eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence            887652110   022223333333333333333321                                            


Q ss_pred             -------------CCCCeeecCCCCCCeeeCC---CCc-EEEeeecccee
Q 039392          117 -------------YSAQVIHCDLKPSNVLLDD---NMV-AHLSDFGIAKL  149 (285)
Q Consensus       117 -------------~~~~~~h~di~~~nili~~---~~~-~~i~df~~~~~  149 (285)
                                   ....++|+|++|.||+++.   ++. +.|+||+.+..
T Consensus       175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                         1346799999999999987   455 48999988764


No 263
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.75  E-value=5.6e-08  Score=78.96  Aligned_cols=75  Identities=15%  Similarity=0.116  Sum_probs=57.7

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCC---ccccccceeccCCceEEEEeccCCC
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHR---NIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      .+.|+.|.++.||++...+|+.+++|+...........+..|++.|+.+.+.   .+++++++.    ..++|||++++.
T Consensus        20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~   95 (288)
T 3d1u_A           20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER   95 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred             eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence            4678999999999998888999999996543332335678899999998764   466666653    368999999987


Q ss_pred             CH
Q 039392           82 SL   83 (285)
Q Consensus        82 ~L   83 (285)
                      ++
T Consensus        96 ~~   97 (288)
T 3d1u_A           96 PP   97 (288)
T ss_dssp             CC
T ss_pred             CC
Confidence            64


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.64  E-value=1.5e-07  Score=79.02  Aligned_cols=74  Identities=11%  Similarity=0.089  Sum_probs=53.8

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCc--cccccceeccC-CceEEEEeccCCC
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRN--IIKVISSCSNE-EFKALVLEYMPHG   81 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~-~~~~~v~e~~~~~   81 (285)
                      .+.++.|....+|+... ++..+++|+....     ..+..|+.+++.+....  +.+++...... +..++|||+++|.
T Consensus        46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~  119 (362)
T 3ovc_A           46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV  119 (362)
T ss_dssp             EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred             EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence            45788899999999876 5788999987543     24667888888776433  45566665543 6688999999876


Q ss_pred             CHH
Q 039392           82 SLE   84 (285)
Q Consensus        82 ~L~   84 (285)
                      ++.
T Consensus       120 ~l~  122 (362)
T 3ovc_A          120 TLQ  122 (362)
T ss_dssp             ETT
T ss_pred             Ccc
Confidence            553


No 265
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.62  E-value=6.5e-08  Score=81.11  Aligned_cols=79  Identities=8%  Similarity=-0.015  Sum_probs=53.3

Q ss_pred             cee-cccCceEEEEEEeC-------CCcEEEEEEeeccch--h-HHHHHHHHHHHHccCC-C--CccccccceeccC---
Q 039392            6 NLI-GRGGFGSVFKARLG-------DGMEVAVKVFNLQYG--R-VFKSFDVECEMMKSIH-H--RNIIKVISSCSNE---   68 (285)
Q Consensus         6 ~~l-g~G~~~~v~~~~~~-------~~~~~~iK~~~~~~~--~-~~~~~~~e~~~l~~l~-h--~~i~~~~~~~~~~---   68 (285)
                      +.| +.|..+.+|+....       +++.+++|+......  . ....+.+|+.+++.+. +  -.+.+++.+....   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            566 78888999988653       267899998654321  0 1144667888887774 2  2456677776554   


Q ss_pred             CceEEEEeccCCCCHH
Q 039392           69 EFKALVLEYMPHGSLE   84 (285)
Q Consensus        69 ~~~~~v~e~~~~~~L~   84 (285)
                      +..++|||+++|.++.
T Consensus       106 g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             SSCEEEEECCCCBCCC
T ss_pred             CCceEEEEecCCCChh
Confidence            4578999999886654


No 266
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=98.49  E-value=1.4e-06  Score=66.35  Aligned_cols=141  Identities=11%  Similarity=0.044  Sum_probs=95.4

Q ss_pred             CCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCcEEEeeeccceecCcccccceec
Q 039392           81 GSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQT  160 (285)
Q Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~  160 (285)
                      .+|.+++...+.+++++++|.++.|.+..|.-+-.  .+.-...-+.|..|++..+|.|.+.+ ....            
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------
Confidence            37999999888899999999999999999888721  11112344567999999999997753 1110            


Q ss_pred             cccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCccccccchhhhhhhhhhcCCCccccccccccCcccchh
Q 039392          161 QTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDEIFNGEMTLKHWVNDWLPISTKEIVDPNLLSREDIHF  240 (285)
Q Consensus       161 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
                        .....+.+||... ...+.+.-|||||+++|..+-...|-+.                                    
T Consensus        98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e------------------------------------  138 (229)
T 2yle_A           98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE------------------------------------  138 (229)
T ss_dssp             -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE------------------------------------
T ss_pred             --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc------------------------------------
Confidence              1122356787653 4557788999999999999987666322                                    


Q ss_pred             hhhhHhHHHHHHhhhccccc-------------------------CcCCCCCHHHHHHHHHH
Q 039392          241 VAKEQCVSFVFNVAMECTVE-------------------------SPEQRINAKEIVTKLVK  277 (285)
Q Consensus       241 ~~~~~~~~~l~~li~~~l~~-------------------------~p~~Rps~~eil~~l~~  277 (285)
                        +...++.+.+||..|...                         .+..|+|+++|++....
T Consensus       139 --E~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~  198 (229)
T 2yle_A          139 --ERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA  198 (229)
T ss_dssp             --EECCCHHHHHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred             --chhhCHHHHHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence              223445577777777654                         34678999999987764


No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.31  E-value=3.8e-06  Score=69.75  Aligned_cols=31  Identities=26%  Similarity=0.338  Sum_probs=28.2

Q ss_pred             CCCeeecCCCCCCeeeCCCCcEEEeeeccce
Q 039392          118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       118 ~~~~~h~di~~~nili~~~~~~~i~df~~~~  148 (285)
                      ..+++|+|+++.||+++.++.+.++||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            5789999999999999888899999998875


No 268
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.29  E-value=3.3e-06  Score=71.75  Aligned_cols=75  Identities=17%  Similarity=0.163  Sum_probs=47.2

Q ss_pred             CceecccCceEEEEEEeC-CCcEEEEEEeeccch-------hHHHHHHHHHHHHccCCC--Cc-cccccceeccCCceEE
Q 039392            5 NNLIGRGGFGSVFKARLG-DGMEVAVKVFNLQYG-------RVFKSFDVECEMMKSIHH--RN-IIKVISSCSNEEFKAL   73 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~~   73 (285)
                      .+.+|.|..+.||++... +++.+++|.......       .....+..|.++++.+..  +. +++++.+  +....++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            467899999999999643 468899998653221       122345678888877632  33 3344443  2344579


Q ss_pred             EEeccCCC
Q 039392           74 VLEYMPHG   81 (285)
Q Consensus        74 v~e~~~~~   81 (285)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999763


No 269
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.13  E-value=3.5e-05  Score=63.04  Aligned_cols=75  Identities=15%  Similarity=0.140  Sum_probs=58.2

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCC---CCccccccceeccCCceEEEEeccCCC
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH---HRNIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      .+.|+.|....+|+... ++..+++|+....   ....+..|+..|+.+.   ...+++++.+....+..++|||+++|.
T Consensus        41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            35788999999999976 4678999987643   2355677888888774   356778888887778899999999886


Q ss_pred             CH
Q 039392           82 SL   83 (285)
Q Consensus        82 ~L   83 (285)
                      ++
T Consensus       117 ~~  118 (312)
T 3jr1_A          117 KN  118 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            54


No 270
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.12  E-value=1.3e-05  Score=64.90  Aligned_cols=74  Identities=15%  Similarity=0.128  Sum_probs=52.3

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCC---ccccccceeccCCceEEEEeccCCC
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHR---NIIKVISSCSNEEFKALVLEYMPHG   81 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~~v~e~~~~~   81 (285)
                      .+.+|.|..+.||+....+|+.+++|+...........+..|+..|+.+...   .+++++++.    ..+++||++.+.
T Consensus        20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~   95 (288)
T 3f7w_A           20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER   95 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred             EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeeccc
Confidence            4578999999999999989999999987654443334567788888877422   234444432    246899998765


Q ss_pred             C
Q 039392           82 S   82 (285)
Q Consensus        82 ~   82 (285)
                      .
T Consensus        96 ~   96 (288)
T 3f7w_A           96 P   96 (288)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.98  E-value=1.8e-05  Score=64.61  Aligned_cols=71  Identities=11%  Similarity=0.054  Sum_probs=44.1

Q ss_pred             CceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCcc-ccccceeccCCceEEEEecc-CCCC
Q 039392            5 NNLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI-IKVISSCSNEEFKALVLEYM-PHGS   82 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~v~e~~-~~~~   82 (285)
                      .+.|+.|....+|+.     ..+++|+........ -...+|+.+++.+...++ .+++....+  .-+++++++ +|.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCcc
Confidence            678888999999999     569999876543221 123457777776642223 455554332  345899999 6654


Q ss_pred             H
Q 039392           83 L   83 (285)
Q Consensus        83 L   83 (285)
                      +
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 272
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.83  E-value=0.0002  Score=59.14  Aligned_cols=33  Identities=27%  Similarity=0.267  Sum_probs=28.4

Q ss_pred             CCCeeecCCCCCCeeeCCC----CcEEEeeeccceec
Q 039392          118 SAQVIHCDLKPSNVLLDDN----MVAHLSDFGIAKLL  150 (285)
Q Consensus       118 ~~~~~h~di~~~nili~~~----~~~~i~df~~~~~~  150 (285)
                      ...++|+|+.+.||+++.+    +.+.++||+.+..-
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            5689999999999999874    78999999988653


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.82  E-value=3.3e-05  Score=63.48  Aligned_cols=139  Identities=17%  Similarity=0.182  Sum_probs=74.6

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCc--cccccce------eccCCceEEEEec
Q 039392            6 NLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRN--IIKVISS------CSNEEFKALVLEY   77 (285)
Q Consensus         6 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~------~~~~~~~~~v~e~   77 (285)
                      +.|+.|....+|+....+| .+++|+.....  ..+.+..|+.+++.+...+  +.+++..      ....+..++++++
T Consensus        28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~  104 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF  104 (322)
T ss_dssp             EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred             eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence            4566788889999987555 68899886521  1123445666666553212  2333322      1223567899999


Q ss_pred             cCCCCHHH-----------hhh-------cCCCc----cCHHHHHHH----------------HHHHHHHHHHHhc----
Q 039392           78 MPHGSLEK-----------YLH-------SSNYI----LDIYQRLNI----------------MIDVASTLEYLHF----  115 (285)
Q Consensus        78 ~~~~~L~~-----------~~~-------~~~~~----~~~~~~~~~----------------~~~l~~~l~~lh~----  115 (285)
                      ++|.++..           .+.       .....    .... .+.-                ...+...+..+..    
T Consensus       105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~  183 (322)
T 2ppq_A          105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVD-GWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK  183 (322)
T ss_dssp             CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHH-HHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred             CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChH-HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence            98865311           010       00000    0100 0000                0012233444431    


Q ss_pred             CCCCCeeecCCCCCCeeeCCCCcEEEeeeccce
Q 039392          116 GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       116 ~~~~~~~h~di~~~nili~~~~~~~i~df~~~~  148 (285)
                      ....+++|+|+.+.||+++.++.+.++||+.+.
T Consensus       184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             SSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            113579999999999999887666899998875


No 274
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.79  E-value=0.00012  Score=62.56  Aligned_cols=33  Identities=18%  Similarity=0.277  Sum_probs=28.9

Q ss_pred             CCCeeecCCCCCCeeeCCCCcEEEeeeccceecC
Q 039392          118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT  151 (285)
Q Consensus       118 ~~~~~h~di~~~nili~~~~~~~i~df~~~~~~~  151 (285)
                      ...++|+|++|.||+++.++ +.++||+.+..-.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            78899999999999998776 9999999887543


No 275
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.76  E-value=7.2e-05  Score=62.89  Aligned_cols=140  Identities=14%  Similarity=0.158  Sum_probs=81.0

Q ss_pred             CceecccCceEEEEEEeC--------CCcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCccccccceeccCCceEEEE
Q 039392            5 NNLIGRGGFGSVFKARLG--------DGMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~--------~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      .+.|..|-...+|+....        +++.+++|+..... .......+|..+++.+. +.-..++++.+.+    .+|+
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence            356777888899998754        25789999864322 12344557888888775 3223566666654    2899


Q ss_pred             eccCCCCHHH--------------hhhc---C----CCccC--HHHHHHHHHHHHH-------------------HHHH-
Q 039392           76 EYMPHGSLEK--------------YLHS---S----NYILD--IYQRLNIMIDVAS-------------------TLEY-  112 (285)
Q Consensus        76 e~~~~~~L~~--------------~~~~---~----~~~~~--~~~~~~~~~~l~~-------------------~l~~-  112 (285)
                      |+++|.+|..              .+++   .    .+...  ..++..|..++..                   .+.. 
T Consensus       130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  209 (379)
T 3feg_A          130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL  209 (379)
T ss_dssp             ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred             EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence            9998755421              0110   0    11121  2445555544422                   1222 


Q ss_pred             ---Hhc-CCCCCeeecCCCCCCeeeCCC----CcEEEeeecccee
Q 039392          113 ---LHF-GYSAQVIHCDLKPSNVLLDDN----MVAHLSDFGIAKL  149 (285)
Q Consensus       113 ---lh~-~~~~~~~h~di~~~nili~~~----~~~~i~df~~~~~  149 (285)
                         |.. .....++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence               221 113469999999999999876    7899999988753


No 276
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.74  E-value=9.1e-05  Score=63.93  Aligned_cols=74  Identities=14%  Similarity=0.170  Sum_probs=47.0

Q ss_pred             CceecccCceEEEEEEeCC-CcEEEEEEeeccchhHHHHHHHHHHHHccCCCCcc-ccccceeccCCceEEEEeccCCCC
Q 039392            5 NNLIGRGGFGSVFKARLGD-GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI-IKVISSCSNEEFKALVLEYMPHGS   82 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~v~e~~~~~~   82 (285)
                      .+.|+.|-...+|+....+ +..+++|+......... ...+|..+++.+...++ +++++.+.  +  ..|++|++|.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            3467788889999998754 57899998754332221 12468888888864444 56666663  2  25999998744


Q ss_pred             H
Q 039392           83 L   83 (285)
Q Consensus        83 L   83 (285)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 277
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.70  E-value=7.4e-05  Score=64.07  Aligned_cols=71  Identities=20%  Similarity=0.247  Sum_probs=46.5

Q ss_pred             ceecccCceEEEEEEeCC--------CcEEEEEEeeccchhHHHHHHHHHHHHccCCCCcc-ccccceeccCCceEEEEe
Q 039392            6 NLIGRGGFGSVFKARLGD--------GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRNI-IKVISSCSNEEFKALVLE   76 (285)
Q Consensus         6 ~~lg~G~~~~v~~~~~~~--------~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~v~e   76 (285)
                      +.|+.|....+|++...+        +..+++|+......  ...+..|..+++.+...++ +++++.+.+    .+|++
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            467788889999997542        57899999843211  1334468888887753333 556665543    28899


Q ss_pred             ccCCCC
Q 039392           77 YMPHGS   82 (285)
Q Consensus        77 ~~~~~~   82 (285)
                      +++|.+
T Consensus       153 ~l~G~~  158 (429)
T 1nw1_A          153 YIPSRP  158 (429)
T ss_dssp             CCCEEE
T ss_pred             EeCCcc
Confidence            987643


No 278
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.68  E-value=0.00063  Score=55.93  Aligned_cols=140  Identities=12%  Similarity=0.137  Sum_probs=78.5

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEEeeccchhHHHHHHHHHHHHccCCCCc--cccccce-----eccCCceEEEEecc
Q 039392            6 NLIGRGGFGSVFKARLGDGMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRN--IIKVISS-----CSNEEFKALVLEYM   78 (285)
Q Consensus         6 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~-----~~~~~~~~~v~e~~   78 (285)
                      +.++ |....||+....+|+.+++|+...... ....+..|..+++.+....  +++++..     ....+..+++++++
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            4566 778899998776777899999864321 1234556777776664212  3344432     11234567899999


Q ss_pred             CCCCHH-----------Hhhh-------cC----CCccCHHH----------------------HHHHHHHHHHHHHHHh
Q 039392           79 PHGSLE-----------KYLH-------SS----NYILDIYQ----------------------RLNIMIDVASTLEYLH  114 (285)
Q Consensus        79 ~~~~L~-----------~~~~-------~~----~~~~~~~~----------------------~~~~~~~l~~~l~~lh  114 (285)
                      +|.++.           ..+.       ..    ....+...                      ....+..++..+..+-
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            874431           1110       00    00111110                      0111122222222221


Q ss_pred             c-CCCCCeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392          115 F-GYSAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus       115 ~-~~~~~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      . .....++|+|+++.||+++ + .+.++||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            0 0256789999999999998 4 899999988753


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.55  E-value=0.00014  Score=61.06  Aligned_cols=74  Identities=14%  Similarity=0.199  Sum_probs=43.7

Q ss_pred             CceecccCceEEEEEEeCC---------CcEEEEEEeeccchhHHHHHHHHHHHHccCCCCc-cccccceeccCCceEEE
Q 039392            5 NNLIGRGGFGSVFKARLGD---------GMEVAVKVFNLQYGRVFKSFDVECEMMKSIHHRN-IIKVISSCSNEEFKALV   74 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~---------~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~~v   74 (285)
                      .+.++.|....+|+....+         +..+++|+........ .....|.++++.+...+ .+++++...    -++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTFN----GGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEecC----CcEE
Confidence            3467778888999997543         2689999876543322 12356777777775333 345555442    2589


Q ss_pred             EeccCCCCH
Q 039392           75 LEYMPHGSL   83 (285)
Q Consensus        75 ~e~~~~~~L   83 (285)
                      +++++|.++
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999987543


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.48  E-value=0.0023  Score=52.98  Aligned_cols=32  Identities=22%  Similarity=0.333  Sum_probs=28.0

Q ss_pred             CCCeeecCCCCCCeeeCCCCcEEEeeecccee
Q 039392          118 SAQVIHCDLKPSNVLLDDNMVAHLSDFGIAKL  149 (285)
Q Consensus       118 ~~~~~h~di~~~nili~~~~~~~i~df~~~~~  149 (285)
                      ...++|+|+.+.||+++.++.+.++||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            35799999999999999888899999987764


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=97.36  E-value=0.0006  Score=57.62  Aligned_cols=139  Identities=17%  Similarity=0.179  Sum_probs=80.0

Q ss_pred             ceecccCceEEEEEEeCC--------CcEEEEEEeeccchh---------HH---------HHHHHHHHHHccCC-CCcc
Q 039392            6 NLIGRGGFGSVFKARLGD--------GMEVAVKVFNLQYGR---------VF---------KSFDVECEMMKSIH-HRNI   58 (285)
Q Consensus         6 ~~lg~G~~~~v~~~~~~~--------~~~~~iK~~~~~~~~---------~~---------~~~~~e~~~l~~l~-h~~i   58 (285)
                      +.|..|-...+|++..++        ...+++++.......         .+         +....|..+++.+. +.-.
T Consensus        58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~  137 (401)
T 3f2s_A           58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG  137 (401)
T ss_dssp             EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred             EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence            456667778899987543        368999997654332         11         11224788887775 3334


Q ss_pred             ccccceeccCCceEEEEeccCCCCHHH--h------------hhc---C----CCccC--HHHHHHHHHHHHH-------
Q 039392           59 IKVISSCSNEEFKALVLEYMPHGSLEK--Y------------LHS---S----NYILD--IYQRLNIMIDVAS-------  108 (285)
Q Consensus        59 ~~~~~~~~~~~~~~~v~e~~~~~~L~~--~------------~~~---~----~~~~~--~~~~~~~~~~l~~-------  108 (285)
                      .++++.+.++    +|++|++|.+|..  +            +++   .    .+...  ...+.++..++..       
T Consensus       138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~  213 (401)
T 3f2s_A          138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES  213 (401)
T ss_dssp             CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred             CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence            5677776532    8899998754421  1            000   0    11111  1233334433221       


Q ss_pred             ---------------HH----HHHhc-CCCCCeeecCCCCCCeeeCCC------CcEEEeeeccce
Q 039392          109 ---------------TL----EYLHF-GYSAQVIHCDLKPSNVLLDDN------MVAHLSDFGIAK  148 (285)
Q Consensus       109 ---------------~l----~~lh~-~~~~~~~h~di~~~nili~~~------~~~~i~df~~~~  148 (285)
                                     -+    ..|.. .....++|+|+.+.||+++.+      +.+.++||..+.
T Consensus       214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence                           11    22221 123468999999999999876      789999998875


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.77  E-value=0.0048  Score=52.57  Aligned_cols=74  Identities=12%  Similarity=0.244  Sum_probs=47.3

Q ss_pred             CceecccCceEEEEEEeCC--------CcEEEEEEeeccchhHHHHHHHHHHHHccCC-CCccccccceeccCCceEEEE
Q 039392            5 NNLIGRGGFGSVFKARLGD--------GMEVAVKVFNLQYGRVFKSFDVECEMMKSIH-HRNIIKVISSCSNEEFKALVL   75 (285)
Q Consensus         5 ~~~lg~G~~~~v~~~~~~~--------~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~   75 (285)
                      .+.+..|-...+|+....+        +..+++|+......... ...+|..+++.+. +.-..++++.+.    -++|+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~i-dR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFY-DSKVELDVFRYLSNINIAPNIIADFP----EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCC-CHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhc-CHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence            3567778888999997643        57899999755432221 2346888887775 222345555432    26899


Q ss_pred             eccCCCCH
Q 039392           76 EYMPHGSL   83 (285)
Q Consensus        76 e~~~~~~L   83 (285)
                      ++++|.+|
T Consensus       150 efI~G~~l  157 (424)
T 3mes_A          150 EFIDGEPL  157 (424)
T ss_dssp             ECCCSEEC
T ss_pred             EEeCCccC
Confidence            99988553


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.42  E-value=0.0029  Score=53.69  Aligned_cols=30  Identities=27%  Similarity=0.375  Sum_probs=25.3

Q ss_pred             CeeecCCCCCCeee------CCCCcEEEeeecccee
Q 039392          120 QVIHCDLKPSNVLL------DDNMVAHLSDFGIAKL  149 (285)
Q Consensus       120 ~~~h~di~~~nili------~~~~~~~i~df~~~~~  149 (285)
                      .++|+|+.+.||++      +.++.+.++||..+..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            47899999999999      4567799999988753


No 284
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=92.67  E-value=0.51  Score=35.85  Aligned_cols=128  Identities=13%  Similarity=0.226  Sum_probs=80.8

Q ss_pred             HHHHHccCCCCccccccceeccCCceEEEEeccC-CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 039392           46 ECEMMKSIHHRNIIKVISSCSNEEFKALVLEYMP-HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHC  124 (285)
Q Consensus        46 e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~  124 (285)
                      |+.+|.. .||++++. .+-...+.+.+.++.-+ +.++.. +.    ..+....++++.+|+....+++     .=+|-
T Consensus        36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf  103 (215)
T 4ann_A           36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTF  103 (215)
T ss_dssp             GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEEC
T ss_pred             HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEE
Confidence            4444543 57878766 45555566555555543 233433 22    2777888888888888775544     23566


Q ss_pred             CCCCCCeeeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCcc
Q 039392          125 DLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTDE  204 (285)
Q Consensus       125 di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~~  204 (285)
                      -++|+|++++.++.+++.-.|+-..+                   +|.     ..+...=.-..=+++..+++++..|+.
T Consensus       104 ~L~P~NL~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~  159 (215)
T 4ann_A          104 VLAPDELFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA  159 (215)
T ss_dssp             CCSGGGEEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred             EEecceEEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            79999999999999999877664321                   222     112222234567788889999998876


Q ss_pred             ccccc
Q 039392          205 IFNGE  209 (285)
Q Consensus       205 ~~~~~  209 (285)
                      ..++.
T Consensus       160 l~~G~  164 (215)
T 4ann_A          160 LVEGN  164 (215)
T ss_dssp             HHHSC
T ss_pred             HHcCh
Confidence            54443


No 285
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=88.55  E-value=1.8  Score=32.91  Aligned_cols=122  Identities=15%  Similarity=0.162  Sum_probs=75.2

Q ss_pred             HHHHHccCCCCccccccceeccCCceEEEEecc-CCCCHHHhhhcCCCccCHHHHHHHHHHHHHHHH-HHhcCCCCCeee
Q 039392           46 ECEMMKSIHHRNIIKVISSCSNEEFKALVLEYM-PHGSLEKYLHSSNYILDIYQRLNIMIDVASTLE-YLHFGYSAQVIH  123 (285)
Q Consensus        46 e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~lh~~~~~~~~h  123 (285)
                      ++.++.. .||++  -..+-...+.+.+.++.- .+.++..+ +    ..+....++++.+|+.... ++     ..-++
T Consensus        41 e~~lL~~-~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-~----~~~~~eKlrll~nl~~L~~~~~-----~~r~t  107 (219)
T 4ano_A           41 ELEVLKE-VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-R----KTTLLSRIRAAIHLVSKVKHHS-----ARRLI  107 (219)
T ss_dssp             GGGGGGG-SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-H----TSCHHHHHHHHHHHHHHHSSCC-----SSSEE
T ss_pred             HHHHHhc-cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-H----hcCHHHHHHHHHHHHHHHHHhh-----hCcee
Confidence            3444433 57777  333445666666666654 23344433 2    2677788888887777555 33     34467


Q ss_pred             cCCCCCCeeeCCCCcEEEeeeccceecCcccccceeccccccccccCCcccCCCccCcchhhHHHHHHHHHHhhCCCCCc
Q 039392          124 CDLKPSNVLLDDNMVAHLSDFGIAKLLTREDISTIQTQTLATIGYMAPEYGKEGRVSANGDVYSFGIMLIETFTRKKPTD  203 (285)
Q Consensus       124 ~di~~~nili~~~~~~~i~df~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~~ll~g~~p~~  203 (285)
                      --++|+|++++.++.+++...|.-..+                   +|.-+     +...=.-..=+++..++.++..|+
T Consensus       108 f~l~P~NL~f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          108 FIVCPENLMFNRALEPFFLHVGVKESL-------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             CCCCGGGEEECTTCCEEESCCEETTTB-------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             EEEeCceEEEeCCCcEEEEEcCCcccC-------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence            779999999999999999877764322                   22211     111223356677788888888775


Q ss_pred             c
Q 039392          204 E  204 (285)
Q Consensus       204 ~  204 (285)
                      .
T Consensus       164 ~  164 (219)
T 4ano_A          164 E  164 (219)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 286
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.78  E-value=0.15  Score=43.95  Aligned_cols=59  Identities=8%  Similarity=0.000  Sum_probs=16.4

Q ss_pred             CCceecccCceEEEEEEeCC-CcEEEE------EEeeccc--hhHHHHHHHHHHHHccCCCCcccccccee
Q 039392            4 ENNLIGRGGFGSVFKARLGD-GMEVAV------KVFNLQY--GRVFKSFDVECEMMKSIHHRNIIKVISSC   65 (285)
Q Consensus         4 ~~~~lg~G~~~~v~~~~~~~-~~~~~i------K~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   65 (285)
                      +.+.||   ||.||+|.+.. ..+||+      |......  .+....+.+|..+.+.++|+|+++.+++.
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            345666   99999997643 467887      5543322  22334577788888888999999887764


No 287
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=80.28  E-value=28  Score=30.32  Aligned_cols=136  Identities=14%  Similarity=0.118  Sum_probs=90.4

Q ss_pred             eecccCceEEEEEEeCCCcEEEEEEeecc----chhHHHHHHHHHHHHccCCCCcccccccee-----------------
Q 039392            7 LIGRGGFGSVFKARLGDGMEVAVKVFNLQ----YGRVFKSFDVECEMMKSIHHRNIIKVISSC-----------------   65 (285)
Q Consensus         7 ~lg~G~~~~v~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----------------   65 (285)
                      .+..|--|.|..+..-.+-++|.|+++-.    .+...+..++...+.+  +|..+=+..+..                 
T Consensus       313 i~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eLL  390 (578)
T 3eps_A          313 IEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPALM  390 (578)
T ss_dssp             EECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHHH
T ss_pred             EECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHHH
Confidence            35567778888887667888999999732    2223344444444444  354443332221                 


Q ss_pred             ------------ccCCceEEEEecc--C--CCCHHHhhhcCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 039392           66 ------------SNEEFKALVLEYM--P--HGSLEKYLHSSNYILDIYQRLNIMIDVASTLEYLHFGYSAQVIHCDLKPS  129 (285)
Q Consensus        66 ------------~~~~~~~~v~e~~--~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~h~di~~~  129 (285)
                                  .+++.  +|..++  +  -.+|.=+++.    -+.+++...+...-.|++-|-   ..+|.-||.=..
T Consensus       391 ~EL~~~~ps~le~~gd~--liIkHlYiERRMtPLNLYL~~----a~~~~~~~av~eYG~AIKqLA---aANIFPGDML~K  461 (578)
T 3eps_A          391 ELLLQEAAEKITDLGEQ--IVIRHLYIERRMVPLNIWLEQ----VEGQQLRDAIEEYGNAIRQLA---AANIFPGDMLFK  461 (578)
T ss_dssp             HHHHHHSGGGEEEETTE--EEEEEEEEEECCEEHHHHHHH----CCTHHHHHHHHHHHHHHHHHH---HTTEECSCCCGG
T ss_pred             HHHHHhCCccEEEcCCe--eEeeeeeeeccccchhHHHhh----CCHHHHHHHHHHHHHHHHHHH---HhcCCCcccccc
Confidence                        11222  222222  1  1345555544    344567778888999999999   999999999999


Q ss_pred             CeeeCCCCcEEEeeeccceecCcc
Q 039392          130 NVLLDDNMVAHLSDFGIAKLLTRE  153 (285)
Q Consensus       130 nili~~~~~~~i~df~~~~~~~~~  153 (285)
                      |+=|+..|+|..-|++..+.+++-
T Consensus       462 NFGVTRhgRVVFYDYDEI~ylTdc  485 (578)
T 3eps_A          462 NFGVTRHGRVVFYDYDEICYMTEV  485 (578)
T ss_dssp             GEEECTTCCEEECCGGGCEESTTC
T ss_pred             cCCccccceEEEecccceeeeccc
Confidence            999999999999999998887653


No 288
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=46.69  E-value=17  Score=18.17  Aligned_cols=21  Identities=29%  Similarity=0.322  Sum_probs=17.0

Q ss_pred             CCCHHHHHHHHHHHHHHHhcC
Q 039392          265 RINAKEIVTKLVKIRDSLLRN  285 (285)
Q Consensus       265 Rps~~eil~~l~~l~~~~~~~  285 (285)
                      -|+.+++.+.|.++-+++-+|
T Consensus         6 Dp~~K~l~~cL~~IgDEld~N   26 (34)
T 3pk1_B            6 DASTKKLSECLKRIGDELDSN   26 (34)
T ss_dssp             -CTHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHccc
Confidence            378999999999998887654


No 289
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=40.39  E-value=2.6  Score=36.43  Aligned_cols=30  Identities=17%  Similarity=0.171  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHccCCCCccccccceeccCC
Q 039392           40 FKSFDVECEMMKSIHHRNIIKVISSCSNEE   69 (285)
Q Consensus        40 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   69 (285)
                      ...|..|++.+.+++|+|++++.++|....
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            456889999999999999999999997654


No 290
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=37.05  E-value=25  Score=24.98  Aligned_cols=26  Identities=23%  Similarity=0.358  Sum_probs=21.9

Q ss_pred             cccCcCCCCCHHHHHHHHHHHHHHHh
Q 039392          258 TVESPEQRINAKEIVTKLVKIRDSLL  283 (285)
Q Consensus       258 l~~~p~~Rps~~eil~~l~~l~~~~~  283 (285)
                      ...+|..||+++++++.+++|..++.
T Consensus       138 ~~~~~~~~~~~~eil~~l~~l~~e~~  163 (164)
T 4gqc_A          138 VTDNPLNEPDYDEVVREANKIAGELV  163 (164)
T ss_dssp             ECSCTTCCCCHHHHHHHHHHHHHHCC
T ss_pred             EeCCCCCCCCHHHHHHHHHHHhcccc
Confidence            45678899999999999999987653


No 291
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=35.74  E-value=1.8e+02  Score=23.70  Aligned_cols=78  Identities=17%  Similarity=0.138  Sum_probs=42.4

Q ss_pred             CceEEEEeccCCCCHHHhhhcC-CCccCHHHHHHHHHHH--HHHHHHHhcCCCCC-eee-cCCCCCCeeeCCC-CcEEEe
Q 039392           69 EFKALVLEYMPHGSLEKYLHSS-NYILDIYQRLNIMIDV--ASTLEYLHFGYSAQ-VIH-CDLKPSNVLLDDN-MVAHLS  142 (285)
Q Consensus        69 ~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l--~~~l~~lh~~~~~~-~~h-~di~~~nili~~~-~~~~i~  142 (285)
                      ..++++|+|.+|..|.+.-... ...+....    +.++  +-++..+.++.++- ... ..-.+.|||++.+ +.+..+
T Consensus       155 ~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I  230 (342)
T 1cja_A          155 QANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI  230 (342)
T ss_dssp             CSEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred             ccceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence            3567999999876654431110 01133333    2332  23455555433333 111 1257899999754 458888


Q ss_pred             eeccceec
Q 039392          143 DFGIAKLL  150 (285)
Q Consensus       143 df~~~~~~  150 (285)
                      |-+.+..-
T Consensus       231 Dhn~af~~  238 (342)
T 1cja_A          231 DSKIIPLD  238 (342)
T ss_dssp             SCCCCCCC
T ss_pred             cCCccccC
Confidence            88888653


No 292
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=33.55  E-value=26  Score=31.69  Aligned_cols=26  Identities=31%  Similarity=0.248  Sum_probs=23.1

Q ss_pred             ecCCCCCCeeeCCCCcEEEeeeccce
Q 039392          123 HCDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       123 h~di~~~nili~~~~~~~i~df~~~~  148 (285)
                      -+|=.++|||++.+|.+.=+|||.+.
T Consensus       550 lGDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          550 VGDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCCcceEEeCCCCEEEEeehhhh
Confidence            35778999999999999999999874


No 293
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=33.13  E-value=22  Score=22.40  Aligned_cols=29  Identities=17%  Similarity=0.306  Sum_probs=24.6

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ...||..++.-.|++|.|++||.+.+++-
T Consensus        10 Y~~LI~~Ai~~sp~~~ltL~eIY~~i~~~   38 (85)
T 3bpy_A           10 YAELISQAIESAPEKRLTLAQIYEWMVRT   38 (85)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCcCCccHHHHHHHHHHh
Confidence            45678888888999999999999988764


No 294
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged; winged helix protein, structure, transcription; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=30.33  E-value=33  Score=22.34  Aligned_cols=29  Identities=17%  Similarity=0.132  Sum_probs=24.3

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ...||...+.-.|++|.|++||.+.+++-
T Consensus         7 Y~~LI~~AI~~sp~~~ltL~eIY~~i~~~   35 (100)
T 1kq8_A            7 YIALITMAIRDSAGGRLTLAEINEYLMGK   35 (100)
T ss_dssp             CHHHHHHHHTTSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcHHHHHHHHHHh
Confidence            44678888888999999999999988764


No 295
>3q5w_A Protein CUT8; proteasome, tether, chromosome, cell cycle, dimer, NOVE; 2.75A {Schizosaccharomyces pombe} PDB: 3q5x_A
Probab=27.76  E-value=47  Score=25.53  Aligned_cols=37  Identities=19%  Similarity=0.337  Sum_probs=26.0

Q ss_pred             HHHHHhhhcccccCcC---------CCCCHHHHHHHHHHHHHHHhc
Q 039392          248 SFVFNVAMECTVESPE---------QRINAKEIVTKLVKIRDSLLR  284 (285)
Q Consensus       248 ~~l~~li~~~l~~~p~---------~Rps~~eil~~l~~l~~~~~~  284 (285)
                      .++..++..++...|+         =|||++.+++.|+++.+++..
T Consensus        65 ~qL~sLL~~L~~~HPel~qeI~~~~P~Psl~~al~~L~~~~~~i~~  110 (245)
T 3q5w_A           65 QQLFTILLQCVEKHPDLARDIRGILPAPSMDTCVETLRKLLINLND  110 (245)
T ss_dssp             HHHHHHHHHHHHHCTHHHHHHHTTSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            3355555555555432         389999999999999988753


No 296
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=27.40  E-value=36  Score=22.24  Aligned_cols=29  Identities=10%  Similarity=0.231  Sum_probs=24.3

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ...||...+.-.|++|.|++||.+.+++-
T Consensus         8 Y~~LI~~AI~~sp~~~LtL~eIY~~I~~~   36 (102)
T 1vtn_C            8 YISLITMAIQQAPGKMLTLSEIYQWIMDL   36 (102)
T ss_dssp             HHHHHHHHHHTSTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcHHHHHHHHHHc
Confidence            44677788888999999999999988764


No 297
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis, winged helix protein, protein/DNA complex; HET: DNA; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=27.07  E-value=38  Score=21.90  Aligned_cols=29  Identities=10%  Similarity=0.224  Sum_probs=24.0

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ...||...+.-.|++|.|++||.+.+++-
T Consensus         7 Y~~LI~~AI~~sp~~~ltL~eIY~~i~~~   35 (97)
T 2hdc_A            7 YIALITMAILQSPQKKLTLSGICEFISNR   35 (97)
T ss_dssp             HHHHHHHHHHTCTTTCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHHHh
Confidence            44677778888999999999999988763


No 298
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=25.99  E-value=38  Score=22.50  Aligned_cols=29  Identities=17%  Similarity=0.306  Sum_probs=25.2

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ...||..++.-.|++|.|++||.+.+++-
T Consensus        29 Y~~LI~~AI~~sp~~~LtL~eIY~~I~~~   57 (110)
T 3l2c_A           29 YAELISQAIESAPEKRLTLAQIYEWMVRT   57 (110)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCccCcCHHHHHHHHHHh
Confidence            55788888889999999999999998764


No 299
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=25.58  E-value=42  Score=22.02  Aligned_cols=32  Identities=6%  Similarity=0.015  Sum_probs=27.6

Q ss_pred             hHhHHHHHHhhhcccccCcCCCCCHHHHHHHH
Q 039392          244 EQCVSFVFNVAMECTVESPEQRINAKEIVTKL  275 (285)
Q Consensus       244 ~~~~~~l~~li~~~l~~~p~~Rps~~eil~~l  275 (285)
                      ....-.+++.|-.++..+|.+..|.+++.+.|
T Consensus        46 pe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l   77 (104)
T 2fq3_A           46 PEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV   77 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCCceeeeHHHHHHHc
Confidence            45566789999999999999999999998765


No 300
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer, monomer, winged-helix, magnesium, transcription/DNA complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F 2kiu_A 3qrf_F
Probab=24.74  E-value=37  Score=21.76  Aligned_cols=30  Identities=13%  Similarity=0.222  Sum_probs=24.8

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVKIR  279 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~l~  279 (285)
                      ...||...+.-.|++|.|++||.+.+++-.
T Consensus         8 Y~~LI~~AI~~sp~~~ltL~eIY~~i~~~f   37 (93)
T 2a07_F            8 YATLIRQAIMESSDRQLTLNEIYSWFTRTF   37 (93)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCccHHHHHHHHHHhC
Confidence            446777788888999999999999988743


No 301
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=24.71  E-value=42  Score=22.54  Aligned_cols=29  Identities=21%  Similarity=0.251  Sum_probs=24.8

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVKI  278 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~l  278 (285)
                      ...||...+.-.|+.|.|++||.+.+++-
T Consensus        16 Ya~LI~~AI~~sp~~~LTL~eIY~~I~~~   44 (117)
T 3coa_C           16 YADLITKAIESSAEKRLTLSQIYEWMVKS   44 (117)
T ss_dssp             HHHHHHHHHHTSTTSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCccHHHHHHHHHHh
Confidence            55688888888999999999999998864


No 302
>2hfh_A Genesis, HFH-2; HNF-3 homologues, winged helix protein; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=23.43  E-value=38  Score=22.41  Aligned_cols=28  Identities=11%  Similarity=0.260  Sum_probs=23.6

Q ss_pred             HHHhhhcccccCcCCCCCHHHHHHHHHH
Q 039392          250 VFNVAMECTVESPEQRINAKEIVTKLVK  277 (285)
Q Consensus       250 l~~li~~~l~~~p~~Rps~~eil~~l~~  277 (285)
                      ...||...+.-.|++|.|++||.+.+++
T Consensus         8 Ya~LI~~AI~~sp~~~LtL~eIY~~I~~   35 (109)
T 2hfh_A            8 YIALITMAILQSPQKKLTLSGICEFISN   35 (109)
T ss_dssp             HHHHHHHHHHTCSSSCBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence            4467777888899999999999998875


No 303
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=22.53  E-value=52  Score=31.58  Aligned_cols=26  Identities=19%  Similarity=0.207  Sum_probs=23.1

Q ss_pred             ecCCCCCCeeeCCCCcEEEeeeccce
Q 039392          123 HCDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       123 h~di~~~nili~~~~~~~i~df~~~~  148 (285)
                      -+|=.++|||++.+|.+.=+|||.+.
T Consensus       939 lGDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          939 IGDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCCccEEEecCCCEEEEeehhhh
Confidence            35778999999999999999999875


No 304
>1k4u_P Phagocyte NADPH oxidase subunit P47PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens}
Probab=22.07  E-value=49  Score=16.27  Aligned_cols=15  Identities=20%  Similarity=0.197  Sum_probs=11.6

Q ss_pred             CCCCHHHHHHHHHHH
Q 039392          264 QRINAKEIVTKLVKI  278 (285)
Q Consensus       264 ~Rps~~eil~~l~~l  278 (285)
                      -|||.++|+++....
T Consensus         9 pRPs~~lIl~RCs~~   23 (32)
T 1k4u_P            9 PRPSADLILNRCSES   23 (32)
T ss_dssp             CCCCHHHHHHSSCHH
T ss_pred             CCCCHHHHHHHccHH
Confidence            489999999876543


No 305
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.55  E-value=60  Score=28.90  Aligned_cols=25  Identities=28%  Similarity=0.247  Sum_probs=22.2

Q ss_pred             cCCCCCCeeeCCCCcEEEeeeccce
Q 039392          124 CDLKPSNVLLDDNMVAHLSDFGIAK  148 (285)
Q Consensus       124 ~di~~~nili~~~~~~~i~df~~~~  148 (285)
                      +|=.++||+++.+|.+.=+|||.+.
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhh
Confidence            4667899999999999999999874


No 306
>1gzs_B SOPE; toxin/cell cycle, complex (toxin/cell cycle protein), SOPE, CDC42, salmonella typhimurium, GEF, toxin, lipoprotein; 2.3A {Salmonella typhimurium} SCOP: a.168.1.1 PDB: 1r9k_A 1r6e_A
Probab=20.80  E-value=2e+02  Score=19.75  Aligned_cols=36  Identities=11%  Similarity=0.084  Sum_probs=28.7

Q ss_pred             HHHhhhcccccCcCCC--CCHHHHHHHHHHHHHHHhcC
Q 039392          250 VFNVAMECTVESPEQR--INAKEIVTKLVKIRDSLLRN  285 (285)
Q Consensus       250 l~~li~~~l~~~p~~R--ps~~eil~~l~~l~~~~~~~  285 (285)
                      ..++++....+--.+|  |+.++.-..|+++-+++++|
T Consensus       126 Aeki~M~eV~Plfne~~mptPqqFq~~lEniankylqn  163 (165)
T 1gzs_B          126 AEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQN  163 (165)
T ss_dssp             HHHHHHHHHGGGGTTCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhHHHhccCCCCHHHHHHHHHHHhhHhhcc
Confidence            4566666666655565  89999999999999999987


No 307
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=20.17  E-value=31  Score=21.12  Aligned_cols=19  Identities=11%  Similarity=-0.059  Sum_probs=15.3

Q ss_pred             ccCcchhhHHHHHHHHHHh
Q 039392          178 RVSANGDVYSFGIMLIETF  196 (285)
Q Consensus       178 ~~~~~~Di~slG~~l~~ll  196 (285)
                      .|..+.|+|-++|.++-..
T Consensus        30 SYikAiDvw~~~C~~FVF~   48 (76)
T 1vry_A           30 SYVKAIDIWLAVCLLFVFS   48 (76)
T ss_dssp             HHHHHHHHTHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHH
Confidence            4667899999999987654


Done!